F384903

General Info

Members Datasets Scaffolds Average Seq Length
282 150 271 390

Family's Representative Sequence

Representative Sequence 3300009174|Ga0105241_10036730|Ga0105241_100367302
Length 439
Sequence MTANTNRIHYLFEQYMQKACTREELQELFAFIAQPEYRPLLEQLMDAEYEVLQPLAAAQEIDWEYIYQQVIETANDNVIPLDNKRRFRWTRIAVAATVIIAIGTAGYWLMNRFSKNNIARQEQSVQQSKDVLPGGNKAMLTLADGSTIILDSAQNGMLSEQGSAKVIKNKNGEVEYQPAISNQQLTTDQTQSRTAYNMLATPKGGQYQLVLPDGSKVWLNAASSIRYPVSFTGNERRVELTGEAYFEVAHLQLPSGQKMPFKVSILSSAGGSESTHRGEVEVLGTHFNINAYNDEPSVNTTLLEGRVKVKSEVGSQKSDQASDFGPSVVLNPGQQAIFSSSPAAAENRQKGIKVIDDADLELAMAWKNGFIAFKSADIKSVMRQIARWYNVEVVYEGAVPQRTFTGGISRNVNLSKLLHLLEVSKVHFRIEGNKLVVMP

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
3 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
4 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
5 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
6 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
7 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
8 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
11 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
99 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
100 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
101 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
104 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
107 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
111 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
112 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
113 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
114 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
125 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
126 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
127 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
145 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
146 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
147 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
150 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.1
Metatranscriptomes 0
Isolates 3.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.12
Nodule 0
Rhizoplane 0
Rhizosphere 70.57
Stem 0
Stem Tuber 0
Unclassified 16.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000227 3300001979 Bacteria 23804
2 JGI24739J22299_10001388 3300001989 Bacteria 9102
3 JGI25162J39368_1000121 3300002737 Bacteria 85899
4 rootH1_10001410 3300003316 Bacteria 21672
5 rootH1_10001410 3300003323 Bacteria 4985
6 rootH1_10026749 3300003316 Bacteria 9443
7 rootH1_10059248 3300003316 Bacteria 7787
8 rootH1_10141516 3300003316 Unclassified 1768
9 rootH2_10020362 3300003320 Bacteria 5423
10 rootH2_10295330 3300003320 Bacteria 3528
11 rootL2_10047570 3300003322 Bacteria 4982
12 rootL2_10083085 3300003322 Bacteria 4167
13 rootL2_10121512 3300003322 Bacteria 7938
14 rootL2_10161982 3300003322 Bacteria 5662
15 rootL2_10200333 3300003322 Bacteria 1963
16 rootL2_10230841 3300003322 Bacteria 3855
17 rootL2_10255678 3300003322 Bacteria 2138
18 rootL2_10262293 3300003322 Bacteria 3455
19 rootH1_10033460 3300003323 Bacteria 27122
20 rootH1_10210563 3300003323 Bacteria 3391
21 JGI25160J50197_1000453 3300003354 Bacteria 25592
22 JGI25160J50197_1000819 3300003354 Bacteria 16657
23 Ga0055526_1011861 3300003771 Bacteria 3868
24 Ga0055528_1000198 3300003790 Bacteria 51108
25 Ga0055530_10004067 3300003791 Bacteria 7831
26 Ga0055531_10000085 3300003794 Bacteria 102372
27 Ga0065165_1000182 3300005262 Bacteria 110108
28 Ga0065714_10002544 3300005288 Bacteria 14768
29 Ga0065714_10003572 3300005288 Bacteria 10733
30 Ga0065714_10004289 3300005288 Bacteria 5162
31 Ga0070670_100239839 3300005331 Unclassified 1578
32 Ga0068869_100007907 3300005334 Bacteria 6828
33 Ga0070666_10000140 3300005335 Bacteria 50189
34 Ga0070666_10054492 3300005335 Unclassified 2698
35 Ga0070660_100001349 3300005339 Bacteria 16684
36 Ga0070660_100089913 3300005339 Bacteria 2420
37 Ga0070671_100091914 3300005355 Unclassified 2542
38 Ga0070688_100202005 3300005365 Unclassified 1391
39 Ga0068867_100043465 3300005459 Bacteria 3290
40 Ga0070698_100027069 3300005471 Bacteria 5963
41 Ga0070698_100224688 3300005471 Bacteria 1811
42 Ga0070679_100000117 3300005530 Bacteria 62924
43 Ga0070679_100153015 3300005530 Bacteria 2283
44 Ga0068853_100054440 3300005539 Unclassified 3448
45 Ga0068855_100009085 3300005563 Bacteria 12009
46 Ga0068855_100099034 3300005563 Bacteria 3358
47 Ga0068855_100319633 3300005563 Bacteria 1716
48 Ga0068852_100017798 3300005616 Bacteria 5585
49 Ga0068852_100104541 3300005616 Bacteria 2563
50 Ga0068859_100000644 3300005617 Bacteria 34889
51 Ga0068859_100001504 3300005617 Bacteria 23757
52 Ga0068859_100002170 3300005617 Bacteria 19944
53 Ga0068859_100005261 3300005617 Bacteria 13150
54 Ga0068864_100001583 3300005618 Bacteria 18729
55 Ga0068864_100138669 3300005618 Unclassified 2192
56 Ga0068864_100207217 3300005618 Bacteria 1804
57 Ga0068863_100002603 3300005841 Bacteria 17896
58 Ga0068863_100043967 3300005841 Bacteria 4240
59 Ga0068863_100169604 3300005841 Unclassified 2093
60 Ga0068858_100014080 3300005842 Bacteria 7542
61 Ga0068858_100122155 3300005842 Unclassified 2436
62 Ga0068860_100003714 3300005843 Bacteria 15692
63 Ga0068860_100007800 3300005843 Bacteria 10689
64 Ga0081539_10000366 3300005985 Bacteria 98762
65 Ga0075366_10001253 3300006195 Bacteria 12600
66 Ga0097621_100175991 3300006237 Unclassified 1847
67 Ga0068871_100004118 3300006358 Bacteria 10053
68 Ga0068871_100171720 3300006358 Unclassified 1859
69 Ga0075428_100100173 3300006844 Bacteria 3159
70 Ga0075430_100021650 3300006846 Bacteria 5463
71 Ga0075429_100256705 3300006880 Bacteria 1530
72 Ga0097620_100000644 3300006931 Bacteria 34889
73 Ga0097620_100001504 3300006931 Bacteria 23757
74 Ga0097620_100002170 3300006931 Bacteria 19944
75 Ga0097620_100005261 3300006931 Bacteria 13150
76 Ga0105240_10001733 3300009093 Bacteria 36808
77 Ga0105240_10001852 3300009093 Bacteria 35386
78 Ga0105240_10079200 3300009093 Bacteria 4044
79 Ga0105240_10163641 3300009093 Bacteria 2640
80 Ga0105245_10218935 3300009098 Unclassified 1836
81 Ga0105247_10015972 3300009101 Bacteria 4497
82 Ga0105247_10040494 3300009101 Bacteria 2848
83 Ga0114129_10002972 3300009147 Bacteria 23737
84 Ga0114129_10003731 3300009147 Bacteria 21468
85 Ga0114129_10003832 3300009147 Bacteria 21196
86 Ga0114129_10011762 3300009147 Bacteria 12453
87 Ga0114129_10014216 3300009147 Bacteria 11341
88 Ga0114129_10038636 3300009147 Bacteria 6731
89 Ga0105241_10000964 3300009174 Bacteria 21775
90 Ga0105241_10002539 3300009174 Bacteria 13698
91 Ga0105241_10016311 3300009174 Bacteria 5445
92 Ga0105241_10036730 3300009174 Bacteria 3688
93 Ga0105241_10040728 3300009174 Bacteria 3508
94 Ga0105237_10003256 3300009545 Bacteria 19411
95 Ga0105237_10003939 3300009545 Bacteria 17384
96 Ga0105237_10004376 3300009545 Bacteria 16371
97 Ga0105237_10035281 3300009545 Bacteria 5061
98 Ga0105237_10138626 3300009545 Unclassified 2427
99 Ga0105237_10238297 3300009545 Bacteria 1820
100 Ga0105237_10238298 3300009545 Bacteria 1820
101 Ga0105238_10000986 3300009551 Bacteria 29095
102 Ga0105238_10010102 3300009551 Bacteria 9462
103 Ga0105249_10003983 3300009553 Bacteria 12745
104 Ga0105249_10087618 3300009553 Bacteria 2905
105 Ga0105239_10000132 3300010375 Bacteria 105380
106 Ga0105239_10001764 3300010375 Bacteria 28485
107 Ga0105239_10002444 3300010375 Bacteria 23693
108 Ga0105239_10004524 3300010375 Bacteria 16578
109 Ga0105239_10008330 3300010375 Bacteria 11814
110 Ga0105239_10023338 3300010375 Bacteria 6813
111 Ga0105239_10036051 3300010375 Bacteria 5431
112 Ga0105246_10117766 3300011119 Unclassified 1963
113 Ga0157373_10050820 3300013100 Bacteria 2952
114 Ga0157371_10001953 3300013102 Bacteria 20501
115 Ga0157371_10022732 3300013102 Bacteria 4587
116 Ga0157371_10031346 3300013102 Bacteria 3830
117 Ga0157370_10007102 3300013104 Bacteria 12224
118 Ga0157369_10001103 3300013105 Bacteria 33807
119 Ga0157378_10005947 3300013297 Bacteria 10694
120 Ga0157378_10015185 3300013297 Bacteria 6743
121 Ga0157378_10067864 3300013297 Bacteria 3197
122 Ga0163162_10003387 3300013306 Bacteria 15233
123 Ga0163162_10003993 3300013306 Bacteria 14157
124 Ga0163162_10005317 3300013306 Bacteria 12422
125 Ga0157372_10227104 3300013307 Unclassified 2164
126 Ga0157372_10460275 3300013307 Bacteria 1482
127 Ga0157375_10050291 3300013308 Unclassified 4088
128 Ga0163163_10075016 3300014325 Bacteria 3375
129 Ga0157379_10018228 3300014968 Bacteria 6186
130 Ga0157379_10049276 3300014968 Bacteria 3760
131 Ga0157376_10031473 3300014969 Bacteria 4249
132 Ga0163161_10000457 3300017792 Bacteria 33892
133 Ga0209437_100017 3300025233 Bacteria 694471
134 Ga0209258_108454 3300025242 Bacteria 1446
135 Ga0209673_1000226 3300025273 Bacteria 111427
136 Ga0209564_1000328 3300025295 Bacteria 92405
137 Ga0209758_1004339 3300025297 Bacteria 11884
138 Ga0209050_1002395 3300025298 Bacteria 16245
139 Ga0207426_1000052 3300025302 Bacteria 389825
140 Ga0207426_1010298 3300025302 Bacteria 3637
141 Ga0209257_1000001 3300025304 Bacteria 2274655
142 Ga0209257_1001535 3300025304 Bacteria 26927
143 Ga0207680_10000140 3300025903 Bacteria 34445
144 Ga0207680_10014775 3300025903 Unclassified 4055
145 Ga0207654_10007297 3300025911 Bacteria 5570
146 Ga0207654_10008757 3300025911 Bacteria 5130
147 Ga0207695_10000365 3300025913 Bacteria 103398
148 Ga0207695_10006692 3300025913 Bacteria 14872
149 Ga0207695_10101713 3300025913 Bacteria 2868
150 Ga0207671_10000807 3300025914 Bacteria 39591
151 Ga0207671_10002444 3300025914 Bacteria 19877
152 Ga0207671_10005918 3300025914 Bacteria 11092
153 Ga0207671_10007612 3300025914 Bacteria 9368
154 Ga0207671_10008493 3300025914 Bacteria 8702
155 Ga0207671_10010485 3300025914 Bacteria 7640
156 Ga0207671_10021565 3300025914 Bacteria 4884
157 Ga0207671_10058921 3300025914 Bacteria 2847
158 Ga0207657_10005501 3300025919 Bacteria 13228
159 Ga0207650_10015617 3300025925 Bacteria 5292
160 Ga0207644_10090398 3300025931 Unclassified 2281
161 Ga0207644_10126829 3300025931 Unclassified 1949
162 Ga0207689_10002101 3300025942 Bacteria 18775
163 Ga0207667_10037508 3300025949 Bacteria 5180
164 Ga0207667_10051775 3300025949 Bacteria 4327
165 Ga0207667_10143273 3300025949 Bacteria 2460
166 Ga0207712_10008663 3300025961 Bacteria 6435
167 Ga0207703_10020506 3300026035 Bacteria 5169
168 Ga0207703_10060508 3300026035 Unclassified 3097
169 Ga0207678_10061351 3300026067 Bacteria 3234
170 Ga0207641_10000082 3300026088 Bacteria 138385
171 Ga0207641_10001719 3300026088 Bacteria 21188
172 Ga0207641_10006372 3300026088 Bacteria 9964
173 Ga0207674_10104369 3300026116 Bacteria 2813
174 Ga0207675_100461168 3300026118 Unclassified 1260
175 Ga0207698_10014492 3300026142 Bacteria 5243
176 Ga0268264_10000810 3300028381 Bacteria 33689
177 Ga0268264_10085064 3300028381 Bacteria 2714
178 Ga0307517_10093194 3300028786 Unclassified 2444
179 Ga0307517_10168002 3300028786 Bacteria 1451
180 Ga0307515_10000001 3300028794 Bacteria 4259510
181 Ga0307515_10000707 3300028794 Bacteria 76907
182 Ga0307515_10000993 3300028794 Bacteria 64832
183 Ga0307511_10000417 3300030521 Bacteria 45399
184 Ga0307511_10001345 3300030521 Bacteria 26061
185 Ga0316177_1014853 3300030731 Bacteria 10366
186 Ga0316176_1124655 3300030732 Bacteria 17437
187 Ga0316183_1126685 3300030742 Bacteria 30833
188 Ga0316181_1044003 3300030744 Bacteria 43033
189 Ga0307513_10040102 3300031456 Bacteria 5181
190 Ga0307513_10120676 3300031456 Unclassified 2590
191 Ga0307513_10202859 3300031456 Bacteria 1822
192 Ga0307509_10019047 3300031507 Bacteria 7851
193 Ga0307509_10153844 3300031507 Bacteria 2210
194 Ga0307509_10163820 3300031507 Bacteria 2116
195 Ga0307509_10206202 3300031507 Bacteria 1796
196 Ga0307508_10011533 3300031616 Bacteria 8076
197 Ga0307516_10077308 3300031730 Bacteria 3177
198 Ga0307507_10000184 3300033179 Bacteria 114646
199 Ga0307507_10001380 3300033179 Bacteria 54486
200 Ga0395899_0001501 3300037312 Bacteria 19821
201 Ga0395900_0015580 3300037418 Bacteria 7748
202 Ga0395901_0002287 3300038443 Bacteria 19537
203 Ga0439439_0043090 3300041406 Bacteria 1173
204 Ga0451849_0284054 3300041505 Bacteria 1949
205 Ga0451853_2184157 3300041512 Bacteria 3364
206 Ga0439449_0004782 3300042007 Bacteria 5225
207 Ga0466969_0000772 3300044656 Bacteria 17435
208 Ga0466972_0000161 3300044658 Bacteria 53994
209 Ga0466965_0019279 3300044683 Bacteria 3275
210 Ga0466966_0000080 3300044684 Bacteria 60746
211 Ga0466968_0035283 3300044735 Bacteria 2092
212 Ga0466970_0055961 3300044765 Bacteria 2108
213 Ga0466959_0000009 3300045049 Bacteria 176964
214 Ga0495650_0000014 3300046471 Bacteria 581606
215 Ga0495585_0001290 3300046492 Bacteria 19971
216 Ga0495585_0002526 3300046492 Bacteria 13003
217 Ga0495606_0000241 3300046507 Bacteria 96663
218 Ga0495606_0013519 3300046507 Bacteria 6439
219 Ga0495610_0000074 3300046512 Bacteria 120043
220 Ga0495610_0001644 3300046512 Bacteria 19645
221 Ga0495616_0003197 3300046513 Bacteria 10563
222 Ga0495616_0033178 3300046513 Bacteria 2692
223 Ga0495648_0008905 3300046524 Bacteria 7842
224 Ga0495648_0012769 3300046524 Bacteria 6240
225 Ga0495633_0000035 3300046558 Bacteria 185403
226 Ga0495633_0005600 3300046558 Bacteria 7622
227 Ga0495668_0000032 3300046616 Bacteria 254951
228 Ga0495668_0010192 3300046616 Bacteria 5711
229 Ga0495611_0000056 3300046648 Bacteria 80473
230 Ga0495611_0000595 3300046648 Bacteria 20863
231 Ga0495625_0000003 3300046660 Bacteria 686847
232 Ga0495625_0000227 3300046660 Bacteria 88834
233 Ga0495625_0000358 3300046660 Bacteria 69690
234 Ga0495625_0039138 3300046660 Bacteria 3464
235 Ga0495625_0113718 3300046660 Bacteria 1848
236 Ga0495661_0018841 3300046665 Bacteria 4532
237 Ga0495649_0000002 3300046694 Bacteria 1093458
238 Ga0495687_004214 3300047443 Bacteria 9862
239 Ga0495686_0000083 3300047472 Bacteria 198933
240 Ga0495686_0000086 3300047472 Bacteria 197490
241 Ga0495686_0000113 3300047472 Bacteria 168307
242 Ga0495686_0015899 3300047472 Bacteria 5117
243 Ga0495686_0062424 3300047472 Bacteria 2311
244 Ga0495614_0018212 3300048089 Bacteria 3043
245 Ga0496126_0003492 3300048929 Bacteria 19838
246 Ga0496126_0262750 3300048929 Bacteria 1435
247 Ga0495678_002521 3300049459 Bacteria 12330
248 Ga0501044_0033676 3300049823 Bacteria 5382
249 nmdc:mga0k408_1464_c1 3300050493 Bacteria 12740
250 nmdc:mga05p37_2873_c1 3300050507 Bacteria 19993
251 nmdc:mga05p37_4141_c1 3300050507 Bacteria 16948
252 nmdc:mga05p37_4570_c1 3300050507 Bacteria 4167
253 nmdc:mga05p37_62995_c1 3300050507 Bacteria 3529
254 nmdc:mga05p37_8819_c1 3300050507 Bacteria 11916
255 Ga0500578_0000012 3300053086 Bacteria 188658
256 Ga0500578_0062193 3300053086 Bacteria 2383
257 Ga0500644_0000081 3300053088 Bacteria 58662
258 Ga0500583_0000015 3300053092 Bacteria 147804
259 Ga0500583_0000026 3300053092 Bacteria 110083
260 Ga0500583_0000041 3300053092 Bacteria 84653
261 Ga0500583_0000155 3300053092 Bacteria 28507
262 Ga0500583_0006876 3300053092 Bacteria 3954
263 Ga0500583_0006912 3300053092 Bacteria 3947
264 Ga0500562_000035 3300053108 Bacteria 81116
265 Ga0500608_030231 3300053122 Bacteria 2567
266 Ga0500618_000004 3300053125 Bacteria 293180
267 Ga0500559_0034584 3300053136 Bacteria 2180
268 Ga0500616_0042861 3300053153 Bacteria 2422
269 Ga0500616_0088118 3300053153 Bacteria 1543
270 Ga0500624_002021 3300053157 Bacteria 2851
271 Ga0500634_0043261 3300053161 Bacteria 2442

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005985 Ga0081539_10000366 Ga0081539_1000036640 280
2 3300042007 Ga0439449_0004782 Ga0439449_0004782_4330_5214 282
3 3300053161 Ga0500634_0043261 Ga0500634_0043261_74_1198 311
4 3300047472 Ga0495686_0062424 Ga0495686_0062424_73_1077 317
5 3300005459 Ga0068867_100043465 Ga0068867_1000434651 328
6 iso_pu_bacteria 2852627209 2852631854 328
7 iso_pu_bacteria 2929154850 2929157688 329
8 3300047472 Ga0495686_0015899 Ga0495686_0015899_3979_5088 330
9 3300053092 Ga0500583_0000026 Ga0500583_0000026_28355_29554 330
10 3300003354 JGI25160J50197_1000819 JGI25160J50197_10008196 331
11 3300005339 Ga0070660_100089913 Ga0070660_1000899131 331
12 3300005530 Ga0070679_100153015 Ga0070679_1001530151 331
13 3300013102 Ga0157371_10001953 Ga0157371_1000195310 331
14 3300013104 Ga0157370_10007102 Ga0157370_100071029 331
15 3300025302 Ga0207426_1000052 Ga0207426_100005274 331
16 3300025949 Ga0207667_10143273 Ga0207667_101432732 331
17 3300030742 Ga0316183_1126685 Ga0316183_11266859 331
18 3300030744 Ga0316181_1044003 Ga0316181_104400333 331
19 3300037418 Ga0395900_0015580 Ga0395900_0015580_6548_7732 331
20 3300038443 Ga0395901_0002287 Ga0395901_0002287_8094_9278 331
21 3300013100 Ga0157373_10050820 Ga0157373_100508203 332
22 iso_pu_bacteria 2929239360 2929244518 332
23 3300044658 Ga0466972_0000161 Ga0466972_0000161_11295_12566 334
24 3300028786 Ga0307517_10093194 Ga0307517_100931942 335
25 3300005563 Ga0068855_100009085 Ga0068855_1000090856 336
26 3300009093 Ga0105240_10079200 Ga0105240_100792004 336
27 3300009545 Ga0105237_10238297 Ga0105237_102382971 336
28 3300009545 Ga0105237_10238298 Ga0105237_102382981 336
29 3300010375 Ga0105239_10001764 Ga0105239_100017648 336
30 3300010375 Ga0105239_10008330 Ga0105239_100083306 336
31 3300025913 Ga0207695_10101713 Ga0207695_101017132 336
32 3300025914 Ga0207671_10007612 Ga0207671_100076124 336
33 3300025914 Ga0207671_10021565 Ga0207671_100215652 336
34 3300025949 Ga0207667_10037508 Ga0207667_100375082 336
35 3300047472 Ga0495686_0000113 Ga0495686_0000113_35884_37008 336
36 3300003322 rootL2_10255678 rootL2_102556781 338
37 3300005841 Ga0068863_100043967 Ga0068863_1000439671 338
38 3300025931 Ga0207644_10126829 Ga0207644_101268292 338
39 3300026088 Ga0207641_10006372 Ga0207641_100063725 338
40 3300031507 Ga0307509_10206202 Ga0307509_102062022 339
41 3300003316 rootH1_10026749 rootH1_100267497 340
42 3300003320 rootH2_10020362 rootH2_100203625 340
43 3300041406 Ga0439439_0043090 Ga0439439_0043090_62_1156 340
44 3300053092 Ga0500583_0000015 Ga0500583_0000015_32965_34161 340
45 3300003322 rootL2_10047570 rootL2_100475702 341
46 3300003323 rootH1_10033460 rootH1_100334602 341
47 3300013306 Ga0163162_10003387 Ga0163162_100033873 341
48 3300046512 Ga0495610_0000074 Ga0495610_0000074_92378_93511 341
49 3300053086 Ga0500578_0000012 Ga0500578_0000012_173959_175065 341
50 3300053092 Ga0500583_0006876 Ga0500583_0006876_313_1494 341
51 3300009147 Ga0114129_10002972 Ga0114129_1000297214 342
52 3300030731 Ga0316177_1014853 Ga0316177_10148535 342
53 3300030732 Ga0316176_1124655 Ga0316176_11246558 342
54 3300050507 nmdc:mga05p37_2873_c1 nmdc:mga05p37_2873_c1_916_2109 342
55 3300005617 Ga0068859_100000644 Ga0068859_10000064423 343
56 3300005618 Ga0068864_100138669 Ga0068864_1001386691 343
57 3300005841 Ga0068863_100169604 Ga0068863_1001696041 343
58 3300005842 Ga0068858_100122155 Ga0068858_1001221552 343
59 3300006931 Ga0097620_100000644 Ga0097620_10000064423 343
60 3300009101 Ga0105247_10015972 Ga0105247_100159722 343
61 3300009545 Ga0105237_10035281 Ga0105237_100352812 343
62 3300009553 Ga0105249_10087618 Ga0105249_100876182 343
63 3300025911 Ga0207654_10008757 Ga0207654_100087574 343
64 3300026035 Ga0207703_10060508 Ga0207703_100605082 343
65 3300026118 Ga0207675_100461168 Ga0207675_1004611681 343
66 3300053086 Ga0500578_0062193 Ga0500578_0062193_876_2111 343
67 iso_pu_bacteria 2929239360 2929241761 344
68 3300005288 Ga0065714_10004289 Ga0065714_100042895 345
69 3300046648 Ga0495611_0000056 Ga0495611_0000056_28216_29538 345
70 3300003316 rootH1_10001410 rootH1_100014109 346
71 3300003322 rootL2_10200333 rootL2_102003331 346
72 3300005985 Ga0081539_10000366 Ga0081539_1000036638 346
73 3300028794 Ga0307515_10000001 Ga0307515_10000001770 346
74 3300013105 Ga0157369_10001103 Ga0157369_1000110325 347
75 3300017792 Ga0163161_10000457 Ga0163161_100004575 347
76 3300026067 Ga0207678_10061351 Ga0207678_100613514 347
77 3300031507 Ga0307509_10019047 Ga0307509_100190472 347
78 3300037312 Ga0395899_0001501 Ga0395899_0001501_5564_6715 347
79 iso_pu_bacteria 2738541278 2738731817 347
80 3300005288 Ga0065714_10002544 Ga0065714_100025445 348
81 3300005616 Ga0068852_100104541 Ga0068852_1001045412 348
82 3300009093 Ga0105240_10001852 Ga0105240_100018528 348
83 3300009147 Ga0114129_10003731 Ga0114129_100037316 348
84 3300009174 Ga0105241_10000964 Ga0105241_100009647 348
85 3300009545 Ga0105237_10003939 Ga0105237_100039398 348
86 3300009551 Ga0105238_10000986 Ga0105238_1000098620 348
87 3300010375 Ga0105239_10036051 Ga0105239_100360512 348
88 3300013307 Ga0157372_10227104 Ga0157372_102271042 348
89 3300025913 Ga0207695_10000365 Ga0207695_1000036547 348
90 3300025914 Ga0207671_10002444 Ga0207671_100024449 348
91 3300050507 nmdc:mga05p37_4570_c1 nmdc:mga05p37_4570_c1_1603_2877 348
92 3300006195 Ga0075366_10001253 Ga0075366_100012536 350
93 3300046660 Ga0495625_0000358 Ga0495625_0000358_22623_23837 350
94 3300050493 nmdc:mga0k408_1464_c1 nmdc:mga0k408_1464_c1_2260_3474 350
95 3300053108 Ga0500562_000035 Ga0500562_000035_41376_42608 350
96 3300053153 Ga0500616_0088118 Ga0500616_0088118_301_1533 350
97 3300031456 Ga0307513_10040102 Ga0307513_100401022 352
98 3300053122 Ga0500608_030231 Ga0500608_030231_155_1363 352
99 3300003794 Ga0055531_10000085 Ga0055531_100000859 353
100 3300009174 Ga0105241_10040728 Ga0105241_100407284 353
101 3300009545 Ga0105237_10004376 Ga0105237_100043764 353
102 3300013102 Ga0157371_10031346 Ga0157371_100313462 353
103 3300025302 Ga0207426_1010298 Ga0207426_10102982 353
104 3300025304 Ga0209257_1000001 Ga0209257_10000011175 353
105 3300025914 Ga0207671_10000807 Ga0207671_100008079 353
106 3300026116 Ga0207674_10104369 Ga0207674_101043691 353
107 3300048929 Ga0496126_0003492 Ga0496126_0003492_2549_3718 353
108 3300053092 Ga0500583_0000155 Ga0500583_0000155_25506_26774 353
109 3300053153 Ga0500616_0042861 Ga0500616_0042861_941_2098 353
110 3300009147 Ga0114129_10014216 Ga0114129_100142165 354
111 3300046524 Ga0495648_0012769 Ga0495648_0012769_4114_5325 354
112 3300050507 nmdc:mga05p37_62995_c1 nmdc:mga05p37_62995_c1_924_2165 354
113 iso_pu_bacteria 2738541278 2738731314 354
114 3300003323 rootH1_10210563 rootH1_102105632 356
115 3300003354 JGI25160J50197_1000453 JGI25160J50197_10004532 356
116 3300003771 Ga0055526_1011861 Ga0055526_10118612 356
117 3300003790 Ga0055528_1000198 Ga0055528_100019816 356
118 3300005262 Ga0065165_1000182 Ga0065165_100018230 356
119 3300005617 Ga0068859_100005261 Ga0068859_1000052614 356
120 3300006931 Ga0097620_100005261 Ga0097620_1000052614 356
121 3300025273 Ga0209673_1000226 Ga0209673_10002262 356
122 3300025304 Ga0209257_1001535 Ga0209257_10015353 356
123 3300053136 Ga0500559_0034584 Ga0500559_0034584_115_1497 356
124 iso_pu_bacteria 2840677318 2840677855 356
125 iso_pu_bacteria 2896085136 2896085673 356
126 3300009147 Ga0114129_10003832 Ga0114129_1000383212 357
127 3300031456 Ga0307513_10202859 Ga0307513_102028592 357
128 3300050507 nmdc:mga05p37_4141_c1 nmdc:mga05p37_4141_c1_98_1345 357
129 3300003322 rootL2_10161982 rootL2_101619824 358
130 3300005841 Ga0068863_100002603 Ga0068863_1000026033 358
131 3300006358 Ga0068871_100171720 Ga0068871_1001717201 358
132 3300014968 Ga0157379_10049276 Ga0157379_100492763 358
133 3300014969 Ga0157376_10031473 Ga0157376_100314732 358
134 3300026088 Ga0207641_10001719 Ga0207641_100017196 358
135 3300030521 Ga0307511_10000417 Ga0307511_100004178 358
136 3300053088 Ga0500644_0000081 Ga0500644_0000081_18815_19948 358
137 3300005335 Ga0070666_10054492 Ga0070666_100544922 359
138 3300005471 Ga0070698_100224688 Ga0070698_1002246881 359
139 3300005563 Ga0068855_100319633 Ga0068855_1003196331 359
140 3300025903 Ga0207680_10014775 Ga0207680_100147753 359
141 3300033179 Ga0307507_10000184 Ga0307507_1000018423 359
142 3300041505 Ga0451849_0284054 Ga0451849_0284054_427_1767 359
143 3300047472 Ga0495686_0000083 Ga0495686_0000083_161498_162703 359
144 3300001989 JGI24739J22299_10001388 JGI24739J22299_100013883 360
145 3300003316 rootH1_10141516 rootH1_101415162 360
146 3300003322 rootL2_10083085 rootL2_100830852 360
147 3300009147 Ga0114129_10011762 Ga0114129_100117625 360
148 3300025295 Ga0209564_1000328 Ga0209564_100032857 360
149 3300025298 Ga0209050_1002395 Ga0209050_100239511 360
150 3300028786 Ga0307517_10168002 Ga0307517_101680021 360
151 3300031730 Ga0307516_10077308 Ga0307516_100773081 360
152 3300050507 nmdc:mga05p37_8819_c1 nmdc:mga05p37_8819_c1_3632_4822 360
153 3300003791 Ga0055530_10004067 Ga0055530_100040672 361
154 3300005288 Ga0065714_10003572 Ga0065714_100035727 361
155 3300025297 Ga0209758_1004339 Ga0209758_10043393 361
156 3300003322 rootL2_10230841 rootL2_102308415 362
157 3300003322 rootL2_10262293 rootL2_102622932 362
158 3300031456 Ga0307513_10120676 Ga0307513_101206762 362
159 3300041512 Ga0451853_2184157 Ga0451853_2184157_1405_2646 362
160 3300053092 Ga0500583_0000041 Ga0500583_0000041_51822_53060 362
161 3300053092 Ga0500583_0006912 Ga0500583_0006912_889_2160 362
162 iso_pu_bacteria 2852627209 2852628575 362
163 3300025914 Ga0207671_10008493 Ga0207671_100084937 363
164 3300031616 Ga0307508_10011533 Ga0307508_100115333 363
165 3300044683 Ga0466965_0019279 Ga0466965_0019279_1216_2391 363
166 3300003322 rootL2_10121512 rootL2_101215124 364
167 3300005530 Ga0070679_100000117 Ga0070679_10000011740 364
168 3300006844 Ga0075428_100100173 Ga0075428_1001001734 364
169 3300006846 Ga0075430_100021650 Ga0075430_1000216502 364
170 3300006880 Ga0075429_100256705 Ga0075429_1002567052 364
171 3300009147 Ga0114129_10038636 Ga0114129_100386362 364
172 3300013102 Ga0157371_10022732 Ga0157371_100227325 364
173 3300013307 Ga0157372_10460275 Ga0157372_104602752 364
174 iso_pu_bacteria 2884791551 2884795701 364
175 3300005339 Ga0070660_100001349 Ga0070660_1000013496 365
176 3300005471 Ga0070698_100027069 Ga0070698_1000270692 365
177 3300025919 Ga0207657_10005501 Ga0207657_100055016 365
178 3300044765 Ga0466970_0055961 Ga0466970_0055961_853_2085 365
179 3300046616 Ga0495668_0010192 Ga0495668_0010192_4229_5416 365
180 3300005331 Ga0070670_100239839 Ga0070670_1002398391 366
181 3300005334 Ga0068869_100007907 Ga0068869_1000079072 366
182 3300005335 Ga0070666_10000140 Ga0070666_1000014014 366
183 3300005355 Ga0070671_100091914 Ga0070671_1000919142 366
184 3300005365 Ga0070688_100202005 Ga0070688_1002020051 366
185 3300005616 Ga0068852_100017798 Ga0068852_1000177982 366
186 3300005617 Ga0068859_100001504 Ga0068859_1000015047 366
187 3300005617 Ga0068859_100002170 Ga0068859_10000217013 366
188 3300005618 Ga0068864_100001583 Ga0068864_1000015833 366
189 3300005618 Ga0068864_100207217 Ga0068864_1002072172 366
190 3300005842 Ga0068858_100014080 Ga0068858_1000140803 366
191 3300005843 Ga0068860_100003714 Ga0068860_10000371412 366
192 3300005843 Ga0068860_100007800 Ga0068860_10000780011 366
193 3300006237 Ga0097621_100175991 Ga0097621_1001759912 366
194 3300006358 Ga0068871_100004118 Ga0068871_1000041186 366
195 3300006931 Ga0097620_100001504 Ga0097620_10000150414 366
196 3300006931 Ga0097620_100002170 Ga0097620_10000217013 366
197 3300009098 Ga0105245_10218935 Ga0105245_102189351 366
198 3300009101 Ga0105247_10040494 Ga0105247_100404941 366
199 3300009174 Ga0105241_10002539 Ga0105241_100025394 366
200 3300009545 Ga0105237_10003256 Ga0105237_100032565 366
201 3300009553 Ga0105249_10003983 Ga0105249_100039832 366
202 3300010375 Ga0105239_10023338 Ga0105239_100233384 366
203 3300011119 Ga0105246_10117766 Ga0105246_101177662 366
204 3300013297 Ga0157378_10005947 Ga0157378_100059475 366
205 3300013297 Ga0157378_10015185 Ga0157378_100151855 366
206 3300013297 Ga0157378_10067864 Ga0157378_100678642 366
207 3300013306 Ga0163162_10003993 Ga0163162_100039936 366
208 3300013308 Ga0157375_10050291 Ga0157375_100502914 366
209 3300014968 Ga0157379_10018228 Ga0157379_100182282 366
210 3300025242 Ga0209258_108454 Ga0209258_1084541 366
211 3300025903 Ga0207680_10000140 Ga0207680_100001408 366
212 3300025911 Ga0207654_10007297 Ga0207654_100072976 366
213 3300025914 Ga0207671_10005918 Ga0207671_100059187 366
214 3300025931 Ga0207644_10090398 Ga0207644_100903982 366
215 3300025942 Ga0207689_10002101 Ga0207689_100021017 366
216 3300025961 Ga0207712_10008663 Ga0207712_100086633 366
217 3300026035 Ga0207703_10020506 Ga0207703_100205062 366
218 3300026088 Ga0207641_10000082 Ga0207641_1000008238 366
219 3300026142 Ga0207698_10014492 Ga0207698_100144923 366
220 3300028381 Ga0268264_10000810 Ga0268264_100008104 366
221 3300028381 Ga0268264_10085064 Ga0268264_100850642 366
222 3300044656 Ga0466969_0000772 Ga0466969_0000772_9469_10680 366
223 3300044684 Ga0466966_0000080 Ga0466966_0000080_16280_17491 366
224 3300045049 Ga0466959_0000009 Ga0466959_0000009_99515_100726 366
225 3300005539 Ga0068853_100054440 Ga0068853_1000544403 367
226 3300009093 Ga0105240_10001733 Ga0105240_1000173331 367
227 3300009174 Ga0105241_10016311 Ga0105241_100163114 367
228 3300009545 Ga0105237_10138626 Ga0105237_101386261 367
229 3300009551 Ga0105238_10010102 Ga0105238_100101024 367
230 3300025913 Ga0207695_10006692 Ga0207695_100066924 367
231 3300030521 Ga0307511_10001345 Ga0307511_100013455 367
232 3300044735 Ga0466968_0035283 Ga0466968_0035283_414_1625 367
233 3300049823 Ga0501044_0033676 Ga0501044_0033676_1386_2573 367
234 3300046507 Ga0495606_0000241 Ga0495606_0000241_74445_75644 368
235 3300046648 Ga0495611_0000595 Ga0495611_0000595_216_1442 369
236 3300046660 Ga0495625_0039138 Ga0495625_0039138_2108_3313 370
237 3300014325 Ga0163163_10075016 Ga0163163_100750161 371
238 3300025925 Ga0207650_10015617 Ga0207650_100156172 371
239 3300031507 Ga0307509_10153844 Ga0307509_101538441 372
240 3300031507 Ga0307509_10163820 Ga0307509_101638201 372
241 3300005563 Ga0068855_100099034 Ga0068855_1000990342 373
242 3300009174 Ga0105241_10036730 Ga0105241_100367302 373
243 3300010375 Ga0105239_10004524 Ga0105239_100045246 373
244 3300025949 Ga0207667_10051775 Ga0207667_100517752 373
245 3300048929 Ga0496126_0262750 Ga0496126_0262750_166_1383 373
246 iso_pu_bacteria 2919437846 2919442064 374
247 3300003316 rootH1_10059248 rootH1_100592483 375
248 3300046471 Ga0495650_0000014 Ga0495650_0000014_7892_9085 375
249 3300046492 Ga0495585_0002526 Ga0495585_0002526_705_1898 375
250 3300046512 Ga0495610_0001644 Ga0495610_0001644_5835_7031 375
251 3300046513 Ga0495616_0033178 Ga0495616_0033178_61_1254 375
252 3300046558 Ga0495633_0005600 Ga0495633_0005600_1544_2740 375
253 3300046660 Ga0495625_0000003 Ga0495625_0000003_227719_228912 375
254 3300046665 Ga0495661_0018841 Ga0495661_0018841_3190_4383 375
255 3300046694 Ga0495649_0000002 Ga0495649_0000002_778081_779274 375
256 3300047472 Ga0495686_0000086 Ga0495686_0000086_95874_97229 376
257 3300002737 JGI25162J39368_1000121 JGI25162J39368_100012155 377
258 3300003320 rootH2_10295330 rootH2_102953302 377
259 3300009093 Ga0105240_10163641 Ga0105240_101636412 377
260 3300010375 Ga0105239_10000132 Ga0105239_1000013215 377
261 3300010375 Ga0105239_10002444 Ga0105239_1000244414 377
262 3300013306 Ga0163162_10005317 Ga0163162_100053179 377
263 3300025233 Ga0209437_100017 Ga0209437_100017487 377
264 3300025914 Ga0207671_10010485 Ga0207671_100104853 377
265 3300025914 Ga0207671_10058921 Ga0207671_100589211 377
266 3300046513 Ga0495616_0003197 Ga0495616_0003197_302_1507 377
267 3300047443 Ga0495687_004214 Ga0495687_004214_7855_9057 377
268 3300049459 Ga0495678_002521 Ga0495678_002521_10813_12018 377
269 3300046507 Ga0495606_0013519 Ga0495606_0013519_4752_5960 378
270 3300046660 Ga0495625_0113718 Ga0495625_0113718_364_1572 378
271 3300053125 Ga0500618_000004 Ga0500618_000004_213941_215152 378
272 3300053157 Ga0500624_002021 Ga0500624_002021_1470_2681 378
273 3300028794 Ga0307515_10000707 Ga0307515_100007078 379
274 3300028794 Ga0307515_10000993 Ga0307515_100009935 379
275 3300033179 Ga0307507_10001380 Ga0307507_1000138011 379
276 3300046492 Ga0495585_0001290 Ga0495585_0001290_3808_5022 379
277 3300046524 Ga0495648_0008905 Ga0495648_0008905_4446_5660 379
278 3300046558 Ga0495633_0000035 Ga0495633_0000035_12979_14193 379
279 3300046616 Ga0495668_0000032 Ga0495668_0000032_183994_185208 379
280 3300046660 Ga0495625_0000227 Ga0495625_0000227_79749_80963 379
281 3300048089 Ga0495614_0018212 Ga0495614_0018212_1105_2319 379
282 3300001979 JGI24740J21852_10000227 JGI24740J21852_100002278 401

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16344

FecR_C

FecR, C-terminal

370

437

0.95

PF04773

FecR

FecR protein

197

308

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4m0n-assembly1.cif.gz_A crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 1.65 a resolution 0.8939 190 399
4m0h-assembly2.cif.gz_B crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 2.50 a resolution 0.8916 188 401
4m0h-assembly2.cif.gz_B crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 2.50 a resolution 0.876 188 401
6ovm-assembly1.cif.gz_R crystal structure of the pseudomonas capeferrum anti-sigma regulator pupr c-terminal cell-surface signaling domain in complex with the outer membrane transporter pupb n-terminal signaling domain (semet) 0.8689 190 400
4m0n-assembly1.cif.gz_A crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 1.65 a resolution 0.8662 190 399
ID Description Score Start End Superfamily
4m0hB01 Mainly Beta;Sandwich;Jelly Rolls; 0.9051 188 323 2.60.120.1440
4m0hB01 Mainly Beta;Sandwich;Jelly Rolls; 0.8719 188 323 2.60.120.1440
4m0hB02 Alpha Beta;3-Layer(bab) Sandwich;Phage tail protein beta-alpha-beta fold; 0.8672 328 401 3.55.50.30
4g08A01 Alpha Beta;3-Layer(bab) Sandwich;Phage tail protein beta-alpha-beta fold; 0.838 333 401 3.55.50.30
4m0hB02 Alpha Beta;3-Layer(bab) Sandwich;Phage tail protein beta-alpha-beta fold; 0.8362 328 401 3.55.50.30
ID Description Score Start End GO Terms
AF-A0A519WN38-F1-model_v4 FecR family protein 0.9481 237 401 GO:0016989
AF-A0A1U7L6Y4-F1-model_v4 deleted 0.9424 128 401
AF-A0A3C0S6L9-F1-model_v4 Anti-sigma factor 0.9412 129 401 GO:0016989
AF-A0A3C0S6L9-F1-model_v4 Anti-sigma factor 0.9378 129 401 GO:0016989
AF-A0A356IA00-F1-model_v4 FecR family protein 0.9363 177 399 GO:0016989

Feature Viewer

pLDDT pTM Quality
76.44 0.65 Medium
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Predicted Structure (AlphaFold2)

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