F384821

General Info

Members Datasets Scaffolds Average Seq Length
282 186 564 324

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100008287|Ga0068856_1000082874
Length 338
Sequence MPRGGEAALRAARYLAAVDSHTEGMPTRVITGGVGPLPGATMLERKLRFEAERDDLRLLLMREPRGHAAMSGAILQPPTREDADWGVLFIEVSGCLPMCGHGTIGVATVLVETGMVDVREPETVVRLDTPAGLVEARVAVAGGRAEAVTIRNVPAFLHARDQVAAVDGLGDVPYDMAFGGNFYALVDAAAVGLEVDPARAGDLIAAGARIRDAIPEPVHPADARIAGCHHVVFHAPGRDGAHARNATAIHPGWLDRSPCGTGTSARMAALHARGELALGEAFVNESIIGTRFTGRLVEEADVGGVPAVVPEVTGRAWITAMGQYLLDERDPFPAGFAL

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
127 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
135 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
171 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
172 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
173 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
174 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
175 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
176 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
177 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
181 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
182 2582580736 Prauserella sp. Am3 Isolate Unclassified
183 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
184 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
185 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
186 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.23
Metatranscriptomes 0
Isolates 1.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.55
Nodule 0
Rhizoplane 11.35
Rhizosphere 79.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100008287 3300005614 Bacteria 10131
2 JGI25406J46586_10004141 3300003203 Bacteria 6770
3 JGI25406J46586_10012518 3300003203 Bacteria 3677
4 JGI25407J50210_10000883 3300003373 Bacteria 6469
5 JGI25407J50210_10030408 3300003373 Bacteria 1399
6 Ga0070658_10278372 3300005327 Bacteria 1424
7 Ga0068869_100030814 3300005334 Bacteria 3769
8 Ga0070682_100155766 3300005337 Bacteria 1573
9 Ga0070668_100040298 3300005347 Bacteria 3574
10 Ga0070675_100117222 3300005354 Bacteria 2259
11 Ga0070675_100147079 3300005354 Bacteria 2018
12 Ga0070674_100025558 3300005356 Bacteria 3846
13 Ga0070659_100100058 3300005366 Bacteria 2333
14 Ga0070714_100014815 3300005435 Bacteria 6267
15 Ga0070714_100177526 3300005435 Bacteria 1936
16 Ga0070710_10033197 3300005437 Bacteria 2801
17 Ga0070701_10171820 3300005438 Bacteria 1263
18 Ga0070711_100030444 3300005439 Bacteria 3573
19 Ga0070700_100052054 3300005441 Bacteria 2552
20 Ga0070700_100053121 3300005441 Bacteria 2528
21 Ga0068867_100109264 3300005459 Bacteria 2122
22 Ga0070684_100004954 3300005535 Bacteria 10161
23 Ga0070684_100267786 3300005535 Bacteria 1564
24 Ga0070693_100064140 3300005547 Bacteria 2143
25 Ga0070665_100021926 3300005548 Bacteria 6425
26 Ga0070665_100163791 3300005548 Bacteria 2226
27 Ga0070665_100366610 3300005548 Bacteria 1447
28 Ga0070704_100303959 3300005549 Bacteria 1330
29 Ga0070664_100230285 3300005564 Bacteria 1661
30 Ga0068854_100043564 3300005578 Bacteria 3182
31 Ga0068856_100018323 3300005614 Bacteria 6787
32 Ga0068852_100178034 3300005616 Bacteria 1998
33 Ga0068864_100063264 3300005618 Bacteria 3207
34 Ga0068866_10068266 3300005718 Bacteria 1869
35 Ga0081455_10010428 3300005937 Bacteria 9433
36 Ga0081455_10041063 3300005937 Bacteria 4074
37 Ga0081538_10000313 3300005981 Bacteria 55735
38 Ga0081538_10000338 3300005981 Bacteria 53185
39 Ga0081538_10000379 3300005981 Bacteria 50693
40 Ga0081538_10004706 3300005981 Bacteria 12495
41 Ga0081538_10004710 3300005981 Bacteria 12493
42 Ga0081538_10021966 3300005981 Bacteria 4638
43 Ga0081538_10026116 3300005981 Bacteria 4094
44 Ga0081538_10036453 3300005981 Bacteria 3208
45 Ga0081538_10044552 3300005981 Bacteria 2765
46 Ga0081538_10049210 3300005981 Bacteria 2559
47 Ga0081538_10100260 3300005981 Bacteria 1461
48 Ga0081540_1002462 3300005983 Bacteria 15083
49 Ga0081540_1049872 3300005983 Bacteria 2084
50 Ga0081539_10000274 3300005985 Bacteria 117446
51 Ga0081539_10002191 3300005985 Bacteria 28655
52 Ga0081539_10003852 3300005985 Bacteria 17592
53 Ga0081539_10009799 3300005985 Bacteria 7920
54 Ga0070717_10107838 3300006028 Bacteria 2372
55 Ga0070717_10129499 3300006028 Bacteria 2169
56 Ga0070712_100065509 3300006175 Bacteria 2579
57 Ga0075428_100032690 3300006844 Bacteria 5746
58 Ga0075431_100309040 3300006847 Bacteria 1596
59 Ga0068865_100045278 3300006881 Bacteria 3016
60 Ga0075436_100012973 3300006914 Bacteria 5712
61 Ga0075435_100162626 3300007076 Bacteria 1881
62 Ga0111539_10179158 3300009094 Bacteria 2476
63 Ga0105245_10004062 3300009098 Bacteria 13004
64 Ga0105245_10025464 3300009098 Bacteria 5203
65 Ga0105245_10086856 3300009098 Bacteria 2870
66 Ga0114129_10000010 3300009147 Bacteria 147651
67 Ga0114129_10305915 3300009147 Bacteria 2117
68 Ga0114129_10362761 3300009147 Bacteria 1917
69 Ga0114129_10774447 3300009147 Bacteria 1226
70 Ga0114129_10839771 3300009147 Bacteria 1169
71 Ga0105248_10044528 3300009177 Bacteria 4977
72 Ga0105248_10173068 3300009177 Bacteria 2434
73 Ga0105249_10695745 3300009553 Bacteria 1076
74 Ga0105239_10136447 3300010375 Bacteria 2731
75 Ga0105239_10223688 3300010375 Bacteria 2111
76 Ga0105239_10358350 3300010375 Bacteria 1647
77 Ga0105246_10118862 3300011119 Bacteria 1955
78 Ga0157374_10006826 3300013296 Bacteria 9710
79 Ga0157374_10045778 3300013296 Bacteria 4049
80 Ga0157378_10063458 3300013297 Bacteria 3301
81 Ga0163162_10020917 3300013306 Bacteria 6435
82 Ga0163162_10074599 3300013306 Bacteria 3451
83 Ga0157372_10043107 3300013307 Bacteria 4994
84 Ga0157375_10011775 3300013308 Bacteria 7734
85 Ga0157380_10115312 3300014326 Bacteria 2265
86 Ga0157377_10004950 3300014745 Bacteria 6209
87 Ga0157377_10018668 3300014745 Bacteria 3608
88 Ga0213874_10001954 3300021377 Bacteria 4337
89 Ga0213876_10011645 3300021384 Bacteria 4695
90 Ga0213876_10026372 3300021384 Bacteria 3065
91 Ga0213876_10072863 3300021384 Bacteria 1814
92 Ga0213875_10019299 3300021388 Bacteria 3280
93 Ga0207426_1000393 3300025302 Bacteria 74583
94 Ga0207426_1015427 3300025302 Bacteria 2770
95 Ga0207642_10049951 3300025899 Bacteria 1884
96 Ga0207688_10000389 3300025901 Bacteria 20579
97 Ga0207688_10008374 3300025901 Bacteria 5624
98 Ga0207647_10094361 3300025904 Bacteria 1782
99 Ga0207699_10006020 3300025906 Bacteria 5837
100 Ga0207643_10011780 3300025908 Bacteria 4720
101 Ga0207693_10022945 3300025915 Bacteria 4955
102 Ga0207693_10039943 3300025915 Bacteria 3695
103 Ga0207663_10075187 3300025916 Bacteria 2191
104 Ga0207649_10071297 3300025920 Bacteria 2219
105 Ga0207652_10343253 3300025921 Bacteria 1348
106 Ga0207659_10078993 3300025926 Bacteria 2426
107 Ga0207687_10051267 3300025927 Bacteria 2876
108 Ga0207700_10047628 3300025928 Bacteria 3178
109 Ga0207700_10102049 3300025928 Bacteria 2290
110 Ga0207700_10244479 3300025928 Bacteria 1531
111 Ga0207664_10270121 3300025929 Bacteria 1489
112 Ga0207690_10061673 3300025932 Bacteria 2550
113 Ga0207690_10113399 3300025932 Bacteria 1956
114 Ga0207706_10045559 3300025933 Bacteria 3885
115 Ga0207706_10358318 3300025933 Bacteria 1267
116 Ga0207709_10022190 3300025935 Bacteria 3599
117 Ga0207669_10221098 3300025937 Bacteria 1390
118 Ga0207665_10057438 3300025939 Bacteria 2629
119 Ga0207711_10146363 3300025941 Bacteria 2129
120 Ga0207711_10170989 3300025941 Bacteria 1972
121 Ga0207689_10079234 3300025942 Bacteria 2700
122 Ga0207689_10146791 3300025942 Bacteria 1943
123 Ga0207679_10312857 3300025945 Bacteria 1357
124 Ga0207712_10130102 3300025961 Bacteria 1917
125 Ga0207712_10206013 3300025961 Bacteria 1563
126 Ga0207668_10097085 3300025972 Bacteria 2180
127 Ga0207640_10036649 3300025981 Bacteria 3080
128 Ga0207640_10273240 3300025981 Bacteria 1323
129 Ga0207678_10025994 3300026067 Bacteria 5108
130 Ga0207708_10002398 3300026075 Bacteria 13756
131 Ga0207708_10054732 3300026075 Bacteria 3042
132 Ga0207708_10382761 3300026075 Bacteria 1160
133 Ga0207702_10176400 3300026078 Bacteria 1964
134 Ga0207648_10073487 3300026089 Bacteria 2980
135 Ga0207648_10097074 3300026089 Bacteria 2579
136 Ga0207676_10090458 3300026095 Bacteria 2512
137 Ga0207675_100062273 3300026118 Bacteria 3484
138 Ga0207683_10028055 3300026121 Bacteria 4867
139 Ga0207683_10236825 3300026121 Bacteria 1665
140 Ga0207698_10354207 3300026142 Bacteria 1387
141 Ga0207428_10102912 3300027907 Bacteria 2205
142 Ga0307511_10115739 3300030521 Bacteria 1683
143 Ga0307509_10201897 3300031507 Bacteria 1824
144 Ga0307508_10002856 3300031616 Bacteria 17914
145 Ga0307516_10048122 3300031730 Bacteria 4197
146 Ga0307405_10184850 3300031731 Bacteria 1500
147 Ga0307413_10079827 3300031824 Bacteria 2093
148 Ga0307413_10258908 3300031824 Bacteria 1296
149 Ga0307518_10134995 3300031838 Bacteria 1729
150 Ga0307406_10148720 3300031901 Bacteria 1668
151 Ga0307406_10223999 3300031901 Bacteria 1400
152 Ga0307407_10062101 3300031903 Bacteria 2187
153 Ga0307412_10215337 3300031911 Bacteria 1469
154 Ga0307409_100066914 3300031995 Bacteria 2835
155 Ga0307409_100176489 3300031995 Bacteria 1886
156 Ga0307416_100224706 3300032002 Bacteria 1804
157 Ga0316574_0023476 3300035398 Bacteria 3682
158 Ga0373931_0044487 3300035691 Bacteria 2341
159 Ga0395900_0537470 3300037418 Bacteria 1115
160 Ga0395898_0030196 3300037466 Bacteria 5425
161 Ga0395898_0410810 3300037466 Bacteria 1290
162 Ga0436364_0301699 3300037853 Bacteria 12760
163 Ga0436364_0744391 3300037853 Bacteria 6010
164 Ga0395901_0067111 3300038443 Bacteria 3736
165 Ga0395901_0729157 3300038443 Bacteria 986
166 Ga0436365_0156305 3300039437 Bacteria 3347
167 Ga0436363_1622166 3300039450 Bacteria 1132
168 Ga0436362_1136737 3300039453 Bacteria 2299
169 Ga0466963_0008176 3300044694 Bacteria 6269
170 Ga0466957_0111797 3300044842 Bacteria 1733
171 Ga0466959_0030010 3300045049 Bacteria 4028
172 Ga0466958_0064686 3300045836 Bacteria 2231
173 Ga0466958_0175124 3300045836 Bacteria 1360
174 Ga0466967_0002828 3300045976 Bacteria 11010
175 Ga0466967_0113659 3300045976 Bacteria 2491
176 Ga0495592_0276444 3300046454 Bacteria 1100
177 Ga0495603_0031487 3300046455 Bacteria 3193
178 Ga0495629_0013953 3300046459 Bacteria 5792
179 Ga0495629_0030088 3300046459 Bacteria 3850
180 Ga0495651_0093255 3300046462 Bacteria 2254
181 Ga0495651_0149106 3300046462 Bacteria 1688
182 Ga0495653_0195156 3300046463 Bacteria 1378
183 Ga0495650_0000063 3300046471 Bacteria 277841
184 Ga0495596_0087131 3300046500 Bacteria 1212
185 Ga0495631_0016818 3300046518 Bacteria 3476
186 Ga0495632_0065496 3300046519 Bacteria 1755
187 Ga0495643_0003255 3300046522 Bacteria 12013
188 Ga0495652_0099537 3300046529 Bacteria 2361
189 Ga0495640_0032212 3300046533 Bacteria 3735
190 Ga0495597_0100264 3300046542 Bacteria 1222
191 Ga0495622_0054223 3300046557 Bacteria 1860
192 Ga0495667_0002446 3300046559 Bacteria 12400
193 Ga0495656_0002130 3300046615 Bacteria 6537
194 Ga0495646_0016765 3300046680 Bacteria 4652
195 Ga0495670_0002437 3300046691 Bacteria 9188
196 Ga0495670_0003596 3300046691 Bacteria 7608
197 Ga0495581_0008108 3300047315 Bacteria 6082
198 Ga0495680_0042480 3300047322 Bacteria 3607
199 Ga0495685_002074 3300047447 Bacteria 6225
200 Ga0495593_0010758 3300047673 Bacteria 5275
201 Ga0496100_0006780 3300048903 Bacteria 6273
202 Ga0496100_0109730 3300048903 Bacteria 1915
203 Ga0496100_0196909 3300048903 Bacteria 1466
204 Ga0496101_0056701 3300048904 Bacteria 2832
205 Ga0496102_0032179 3300048905 Bacteria 4712
206 Ga0496102_0052736 3300048905 Bacteria 3707
207 Ga0496103_0150417 3300048906 Bacteria 1491
208 Ga0496104_0008533 3300048907 Bacteria 9107
209 Ga0496104_0015280 3300048907 Bacteria 6951
210 Ga0496104_0039459 3300048907 Bacteria 4421
211 Ga0496104_0280388 3300048907 Bacteria 1580
212 Ga0496105_0006746 3300048908 Bacteria 8826
213 Ga0496106_0037770 3300048909 Bacteria 3613
214 Ga0496106_0044899 3300048909 Bacteria 3318
215 Ga0496107_0063530 3300048910 Bacteria 2676
216 Ga0496107_0063968 3300048910 Bacteria 2666
217 Ga0496107_0239605 3300048910 Bacteria 1350
218 Ga0496108_0008859 3300048911 Bacteria 8153
219 Ga0496108_0100107 3300048911 Bacteria 2471
220 Ga0496109_0001101 3300048912 Bacteria 22392
221 Ga0496110_0001341 3300048913 Bacteria 17705
222 Ga0496110_0049556 3300048913 Bacteria 3684
223 Ga0496110_0051185 3300048913 Bacteria 3629
224 Ga0496110_0232195 3300048913 Bacteria 1678
225 Ga0496111_0005155 3300048914 Bacteria 8330
226 Ga0496111_0048384 3300048914 Bacteria 3063
227 Ga0496112_0006410 3300048915 Bacteria 10327
228 Ga0496112_0009513 3300048915 Bacteria 8764
229 Ga0496112_0017246 3300048915 Bacteria 6780
230 Ga0496112_0191731 3300048915 Bacteria 2005
231 Ga0496113_0011417 3300048916 Bacteria 5923
232 Ga0496113_0053047 3300048916 Bacteria 3031
233 Ga0501034_0014030 3300049571 Bacteria 8250
234 Ga0501038_0246969 3300049574 Bacteria 1415
235 Ga0501038_0266538 3300049574 Bacteria 1352
236 Ga0501039_0099505 3300049575 Bacteria 2269
237 Ga0501039_0106470 3300049575 Bacteria 2190
238 Ga0501040_0297955 3300049576 Bacteria 1153
239 Ga0501042_0057340 3300049578 Bacteria 2779
240 Ga0501042_0063872 3300049578 Bacteria 2631
241 Ga0501042_0116560 3300049578 Bacteria 1923
242 Ga0501046_0192909 3300049580 Bacteria 1519
243 Ga0501067_0074372 3300049583 Bacteria 1883
244 Ga0501071_0435794 3300049587 Bacteria 1002
245 Ga0501072_0046011 3300049588 Bacteria 3433
246 Ga0501072_0336790 3300049588 Bacteria 1198
247 Ga0501075_0432057 3300049591 Bacteria 1004
248 Ga0501076_0020255 3300049592 Bacteria 5090
249 Ga0501079_0071286 3300049741 Bacteria 2684
250 Ga0501080_0410359 3300049742 Bacteria 1218
251 Ga0501081_0146424 3300049743 Bacteria 1695
252 Ga0501045_0019769 3300049824 Bacteria 4806
253 Ga0501045_0067368 3300049824 Bacteria 2629
254 nmdc:mga05p37_12034_c1 3300050507 Bacteria 10325
255 nmdc:mga05p37_237470_c1 3300050507 Bacteria 2193
256 nmdc:mga05p37_408432_c1 3300050507 Bacteria 1583
257 nmdc:mga06r32_214407_c1 3300050510 Bacteria 1913
258 nmdc:mga06r32_96484_c1 3300050510 Bacteria 2896
259 nmdc:mga08y16_224657_c1 3300050511 Bacteria 1943
260 nmdc:mga08y16_39211_c1 3300050511 Bacteria 4970
261 nmdc:mga08y16_549480_c1 3300050511 Bacteria 1169
262 nmdc:mga0a205_98924_c1 3300050515 Bacteria 2815
263 Ga0495619_0214110 3300053085 Bacteria 1334
264 Ga0500578_0047812 3300053086 Bacteria 2744
265 Ga0500566_0071526 3300053094 Bacteria 1946
266 Ga0500652_003108 3300053131 Bacteria 5010
267 Ga0500658_0002900 3300053134 Bacteria 6583
268 Ga0500561_0000832 3300053137 Bacteria 4932
269 Ga0500633_0005823 3300053160 Bacteria 2968
270 Ga0500634_0024632 3300053161 Bacteria 3272
271 Ga0500656_005080 3300053732 Bacteria 1288
272 Ga0501084_0037640 3300054114 Bacteria 4043
273 Ga0501084_0186345 3300054114 Bacteria 1751
274 Ga0501082_0153960 3300060353 Bacteria 1997
275 Ga0501082_0219108 3300060353 Bacteria 1656
276 Ga0466962_0025000 3300061719 Bacteria 2867
277 Ga0530510_0079809 3300061734 Bacteria 2380
278 2583151455 2582580736 Bacteria 5325865
279 2676493198 2675903060 Bacteria 10051191
280 2795786810 2795385470 Bacteria 8317180
281 2867351128 2867346516 Bacteria 7608576
282 8004025952 8004025490 Bacteria 4327753
283 Ga0068856_100008287
284 JGI25406J46586_10004141
285 JGI25406J46586_10012518
286 JGI25407J50210_10000883
287 JGI25407J50210_10030408
288 Ga0070658_10278372
289 Ga0068869_100030814
290 Ga0070682_100155766
291 Ga0070668_100040298
292 Ga0070675_100117222
293 Ga0070675_100147079
294 Ga0070674_100025558
295 Ga0070659_100100058
296 Ga0070714_100014815
297 Ga0070714_100177526
298 Ga0070710_10033197
299 Ga0070701_10171820
300 Ga0070711_100030444
301 Ga0070700_100052054
302 Ga0070700_100053121
303 Ga0068867_100109264
304 Ga0070684_100004954
305 Ga0070684_100267786
306 Ga0070693_100064140
307 Ga0070665_100021926
308 Ga0070665_100163791
309 Ga0070665_100366610
310 Ga0070704_100303959
311 Ga0070664_100230285
312 Ga0068854_100043564
313 Ga0068856_100018323
314 Ga0068852_100178034
315 Ga0068864_100063264
316 Ga0068866_10068266
317 Ga0081455_10010428
318 Ga0081455_10041063
319 Ga0081538_10000313
320 Ga0081538_10000338
321 Ga0081538_10000379
322 Ga0081538_10004706
323 Ga0081538_10004710
324 Ga0081538_10021966
325 Ga0081538_10026116
326 Ga0081538_10036453
327 Ga0081538_10044552
328 Ga0081538_10049210
329 Ga0081538_10100260
330 Ga0081540_1002462
331 Ga0081540_1049872
332 Ga0081539_10000274
333 Ga0081539_10002191
334 Ga0081539_10003852
335 Ga0081539_10009799
336 Ga0070717_10107838
337 Ga0070717_10129499
338 Ga0070712_100065509
339 Ga0075428_100032690
340 Ga0075431_100309040
341 Ga0068865_100045278
342 Ga0075436_100012973
343 Ga0075435_100162626
344 Ga0111539_10179158
345 Ga0105245_10004062
346 Ga0105245_10025464
347 Ga0105245_10086856
348 Ga0114129_10000010
349 Ga0114129_10305915
350 Ga0114129_10362761
351 Ga0114129_10774447
352 Ga0114129_10839771
353 Ga0105248_10044528
354 Ga0105248_10173068
355 Ga0105249_10695745
356 Ga0105239_10136447
357 Ga0105239_10223688
358 Ga0105239_10358350
359 Ga0105246_10118862
360 Ga0157374_10006826
361 Ga0157374_10045778
362 Ga0157378_10063458
363 Ga0163162_10020917
364 Ga0163162_10074599
365 Ga0157372_10043107
366 Ga0157375_10011775
367 Ga0157380_10115312
368 Ga0157377_10004950
369 Ga0157377_10018668
370 Ga0213874_10001954
371 Ga0213876_10011645
372 Ga0213876_10026372
373 Ga0213876_10072863
374 Ga0213875_10019299
375 Ga0207426_1000393
376 Ga0207426_1015427
377 Ga0207642_10049951
378 Ga0207688_10000389
379 Ga0207688_10008374
380 Ga0207647_10094361
381 Ga0207699_10006020
382 Ga0207643_10011780
383 Ga0207693_10022945
384 Ga0207693_10039943
385 Ga0207663_10075187
386 Ga0207649_10071297
387 Ga0207652_10343253
388 Ga0207659_10078993
389 Ga0207687_10051267
390 Ga0207700_10047628
391 Ga0207700_10102049
392 Ga0207700_10244479
393 Ga0207664_10270121
394 Ga0207690_10061673
395 Ga0207690_10113399
396 Ga0207706_10045559
397 Ga0207706_10358318
398 Ga0207709_10022190
399 Ga0207669_10221098
400 Ga0207665_10057438
401 Ga0207711_10146363
402 Ga0207711_10170989
403 Ga0207689_10079234
404 Ga0207689_10146791
405 Ga0207679_10312857
406 Ga0207712_10130102
407 Ga0207712_10206013
408 Ga0207668_10097085
409 Ga0207640_10036649
410 Ga0207640_10273240
411 Ga0207678_10025994
412 Ga0207708_10002398
413 Ga0207708_10054732
414 Ga0207708_10382761
415 Ga0207702_10176400
416 Ga0207648_10073487
417 Ga0207648_10097074
418 Ga0207676_10090458
419 Ga0207675_100062273
420 Ga0207683_10028055
421 Ga0207683_10236825
422 Ga0207698_10354207
423 Ga0207428_10102912
424 Ga0307511_10115739
425 Ga0307509_10201897
426 Ga0307508_10002856
427 Ga0307516_10048122
428 Ga0307405_10184850
429 Ga0307413_10079827
430 Ga0307413_10258908
431 Ga0307518_10134995
432 Ga0307406_10148720
433 Ga0307406_10223999
434 Ga0307407_10062101
435 Ga0307412_10215337
436 Ga0307409_100066914
437 Ga0307409_100176489
438 Ga0307416_100224706
439 Ga0316574_0023476
440 Ga0373931_0044487
441 Ga0395900_0537470
442 Ga0395898_0030196
443 Ga0395898_0410810
444 Ga0436364_0301699
445 Ga0436364_0744391
446 Ga0395901_0067111
447 Ga0395901_0729157
448 Ga0436365_0156305
449 Ga0436363_1622166
450 Ga0436362_1136737
451 Ga0466963_0008176
452 Ga0466957_0111797
453 Ga0466959_0030010
454 Ga0466958_0064686
455 Ga0466958_0175124
456 Ga0466967_0002828
457 Ga0466967_0113659
458 Ga0495592_0276444
459 Ga0495603_0031487
460 Ga0495629_0013953
461 Ga0495629_0030088
462 Ga0495651_0093255
463 Ga0495651_0149106
464 Ga0495653_0195156
465 Ga0495650_0000063
466 Ga0495596_0087131
467 Ga0495631_0016818
468 Ga0495632_0065496
469 Ga0495643_0003255
470 Ga0495652_0099537
471 Ga0495640_0032212
472 Ga0495597_0100264
473 Ga0495622_0054223
474 Ga0495667_0002446
475 Ga0495656_0002130
476 Ga0495646_0016765
477 Ga0495670_0002437
478 Ga0495670_0003596
479 Ga0495581_0008108
480 Ga0495680_0042480
481 Ga0495685_002074
482 Ga0495593_0010758
483 Ga0496100_0006780
484 Ga0496100_0109730
485 Ga0496100_0196909
486 Ga0496101_0056701
487 Ga0496102_0032179
488 Ga0496102_0052736
489 Ga0496103_0150417
490 Ga0496104_0008533
491 Ga0496104_0015280
492 Ga0496104_0039459
493 Ga0496104_0280388
494 Ga0496105_0006746
495 Ga0496106_0037770
496 Ga0496106_0044899
497 Ga0496107_0063530
498 Ga0496107_0063968
499 Ga0496107_0239605
500 Ga0496108_0008859
501 Ga0496108_0100107
502 Ga0496109_0001101
503 Ga0496110_0001341
504 Ga0496110_0049556
505 Ga0496110_0051185
506 Ga0496110_0232195
507 Ga0496111_0005155
508 Ga0496111_0048384
509 Ga0496112_0006410
510 Ga0496112_0009513
511 Ga0496112_0017246
512 Ga0496112_0191731
513 Ga0496113_0011417
514 Ga0496113_0053047
515 Ga0501034_0014030
516 Ga0501038_0246969
517 Ga0501038_0266538
518 Ga0501039_0099505
519 Ga0501039_0106470
520 Ga0501040_0297955
521 Ga0501042_0057340
522 Ga0501042_0063872
523 Ga0501042_0116560
524 Ga0501046_0192909
525 Ga0501067_0074372
526 Ga0501071_0435794
527 Ga0501072_0046011
528 Ga0501072_0336790
529 Ga0501075_0432057
530 Ga0501076_0020255
531 Ga0501079_0071286
532 Ga0501080_0410359
533 Ga0501081_0146424
534 Ga0501045_0019769
535 Ga0501045_0067368
536 nmdc:mga05p37_12034_c1
537 nmdc:mga05p37_237470_c1
538 nmdc:mga05p37_408432_c1
539 nmdc:mga06r32_214407_c1
540 nmdc:mga06r32_96484_c1
541 nmdc:mga08y16_224657_c1
542 nmdc:mga08y16_39211_c1
543 nmdc:mga08y16_549480_c1
544 nmdc:mga0a205_98924_c1
545 Ga0495619_0214110
546 Ga0500578_0047812
547 Ga0500566_0071526
548 Ga0500652_003108
549 Ga0500658_0002900
550 Ga0500561_0000832
551 Ga0500633_0005823
552 Ga0500634_0024632
553 Ga0500656_005080
554 Ga0501084_0037640
555 Ga0501084_0186345
556 Ga0501082_0153960
557 Ga0501082_0219108
558 Ga0466962_0025000
559 Ga0530510_0079809
560 2583151455
561 2676493198
562 2795786810
563 2867351128
564 8004025952

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05544

Pro_racemase

Proline racemase

17

337

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lb0-assembly1.cif.gz_A crystal structure of a hydroxyproline epimerase from agrobacterium vitis, target efi-506420, with bound trans-4-oh-l-proline 0.9325 1 288
2azp-assembly1.cif.gz_A crystal structure of pa1268 solved by sulfur sad 0.9064 7 290
4k7g-assembly1.cif.gz_B crystal structure of a 3-hydroxyproline dehydratse from agrobacterium vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered active site 0.883 7 319
4q2h-assembly1.cif.gz_B crystal structure of probable proline racemase from agrobacterium radiobacter k84, target efi-506561, with bound carbonate 0.875 6 319
1w62-assembly1.cif.gz_A proline racemase in complex with one molecule of pyrrole-2-carboxylic acid (hemi form) 0.8742 7 319
ID Description Score Start End Superfamily
af_Q96EM0_162_315_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9433 145 295 3.10.310.10
af_Q4DA80_219_397_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9412 145 293 3.10.310.10
af_Q868H8_7_132_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9397 8 129 3.10.310.10
4k7gD02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9392 147 297 3.10.310.10
af_Q4DA80_75_217_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9353 6 143 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A6B3H027-F1-model_v4 Proline racemase family protein 0.9918 173 297 GO:0047580
AF-A0A4Y1ZGN6-F1-model_v4 Proline racemase (EC 5.1.1.4) 0.9845 62 176 GO:0018112
GO:0047580
AF-A0A6B3GDB1-F1-model_v4 Proline racemase family protein 0.9753 1 179 GO:0047580
AF-A0A499VN48-F1-model_v4 Proline racemase 0.9688 1 180 GO:0047580
AF-A0A4Y1ZGN6-F1-model_v4 Proline racemase (EC 5.1.1.4) 0.9679 62 176 GO:0018112
GO:0047580

Map