F384718

General Info

Members Datasets Scaffolds Average Seq Length
282 203 564 416

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100036250|Ga0070690_1000362503
Length 451
Sequence MTGTGNGEPGTVSLYRDVEDSSPAAPRASARKANDARFPVPGSRSTVIDACRDDFPILKIKVRGDTPLVYLDNAATTQKPQVVIDATSRYYAEENANIHRGVHWLSERATEAYDRVREAARGFLGAKHAHEVIFTHGTTEGINLVASSFGEAFVKPGDEIVVTEMEHHSNLVPWQLMAARRGAKVRAVPVTDRGELDLEALGALLGPRTRLLAVTQLSNVLGTVNPVADIVALAHDRGVAVLVDGAQSAPRTPVNVQDLGCDFFVCSSHKMYGPMGVGILYGRESLLDQMPPYEGGGDMIDTVGLECSSFAPLPAKFEAGTPNVAGVVGLGAALGWIEGVGRDTIAAHEVALVDYAVQRLSALDGVSVVGAPAERTGVVSFVMDGVHPHDIGTILDEHGIAIRGGHHCAQPLMARLGLVATARASFGAYSASEEVDALVDGLRTVRQVFPL

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
70 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
105 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
119 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
120 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
121 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
122 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
123 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
124 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
125 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
126 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
127 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
128 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
129 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
130 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
131 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
132 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
133 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
134 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
135 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
136 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
137 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
138 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
139 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
140 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
141 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
142 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
145 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
146 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
147 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
148 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
149 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
150 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
151 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
152 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
153 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
154 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
160 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
179 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
180 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
181 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
182 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
183 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
184 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
187 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
188 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 2511231017 Pseudomonas sp. GM55 Isolate Nodule
197 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
198 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
199 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
200 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
201 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
202 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
203 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.16
Metatranscriptomes 0
Isolates 2.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.03
Nodule 0.35
Rhizoplane 1.42
Rhizosphere 89.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100036250 3300005330 Bacteria 3098
2 SwRhRL2b_contig_1874099 2162886007 Bacteria 355736
3 JGI25162J39368_1000304 3300002737 Bacteria 45066
4 JGI25163J39215_1000074 3300002771 Bacteria 44810
5 JGI25164J39214_1000223 3300002772 Bacteria 45067
6 JGI25165J46597_1000410 3300003214 Bacteria 45073
7 Ga0065712_10081154 3300005290 Bacteria 3033
8 Ga0065707_10006434 3300005295 Bacteria 3187
9 Ga0070670_100050296 3300005331 Bacteria 3582
10 Ga0070670_100165092 3300005331 Bacteria 1919
11 Ga0070666_10007139 3300005335 Bacteria 6885
12 Ga0070666_10058126 3300005335 Bacteria 2615
13 Ga0070680_100019340 3300005336 Bacteria 5397
14 Ga0068868_100031083 3300005338 Bacteria 4098
15 Ga0068868_100096567 3300005338 Bacteria 2387
16 Ga0070660_100103813 3300005339 Bacteria 2254
17 Ga0070689_100061838 3300005340 Bacteria 2912
18 Ga0070661_100025826 3300005344 Bacteria 4222
19 Ga0070661_100057977 3300005344 Bacteria 2837
20 Ga0070661_100136473 3300005344 Bacteria 1846
21 Ga0070692_10015610 3300005345 Bacteria 3595
22 Ga0070668_100014386 3300005347 Bacteria 5913
23 Ga0070668_100095383 3300005347 Bacteria 2350
24 Ga0070669_100008716 3300005353 Bacteria 7236
25 Ga0070669_100162494 3300005353 Bacteria 1736
26 Ga0070675_100040420 3300005354 Bacteria 3807
27 Ga0070688_100049040 3300005365 Bacteria 2626
28 Ga0070688_100057821 3300005365 Bacteria 2439
29 Ga0070688_100090978 3300005365 Bacteria 1993
30 Ga0070659_100009038 3300005366 Bacteria 7311
31 Ga0070713_100194756 3300005436 Bacteria 1828
32 Ga0070708_100031386 3300005445 Bacteria 4598
33 Ga0070678_100003740 3300005456 Bacteria 8519
34 Ga0070681_10021194 3300005458 Bacteria 6512
35 Ga0070706_100064466 3300005467 Bacteria 3386
36 Ga0070707_100002810 3300005468 Bacteria 16549
37 Ga0070707_100049600 3300005468 Bacteria 4024
38 Ga0070699_100070565 3300005518 Bacteria 3037
39 Ga0070699_100237482 3300005518 Bacteria 1626
40 Ga0070679_100085830 3300005530 Bacteria 3135
41 Ga0070684_100086419 3300005535 Bacteria 2783
42 Ga0070704_100045792 3300005549 Bacteria 3046
43 Ga0068855_100219335 3300005563 Bacteria 2134
44 Ga0070664_100010453 3300005564 Bacteria 7522
45 Ga0068857_100011109 3300005577 Bacteria 7833
46 Ga0068859_100000001 3300005617 Bacteria 545224
47 Ga0068859_100390812 3300005617 Bacteria 1487
48 Ga0068864_100018617 3300005618 Bacteria 5803
49 Ga0068861_100092679 3300005719 Bacteria 2387
50 Ga0068870_10080214 3300005840 Bacteria 1802
51 Ga0068863_100025697 3300005841 Bacteria 5616
52 Ga0068863_100039446 3300005841 Bacteria 4492
53 Ga0068858_100013205 3300005842 Bacteria 7781
54 Ga0068862_100012176 3300005844 Bacteria 7111
55 Ga0075365_10070360 3300006038 Bacteria 2353
56 Ga0075364_10029834 3300006051 Bacteria 3498
57 Ga0075364_10057198 3300006051 Bacteria 2554
58 Ga0075432_10001667 3300006058 Bacteria 7313
59 Ga0075367_10003718 3300006178 Bacteria 7337
60 Ga0075366_10100474 3300006195 Bacteria 1736
61 Ga0097621_100136665 3300006237 Bacteria 2091
62 Ga0075370_10002749 3300006353 Bacteria 8238
63 Ga0068871_100079353 3300006358 Bacteria 2716
64 Ga0075428_100087764 3300006844 Bacteria 3393
65 Ga0075433_10015607 3300006852 Bacteria 6238
66 Ga0075434_100136298 3300006871 Bacteria 2474
67 Ga0075434_100148723 3300006871 Bacteria 2362
68 Ga0068865_100117537 3300006881 Bacteria 1971
69 Ga0097620_100000001 3300006931 Bacteria 545224
70 Ga0097620_100390816 3300006931 Bacteria 1487
71 Ga0111539_10069389 3300009094 Bacteria 4162
72 Ga0111539_10171840 3300009094 Bacteria 2532
73 Ga0111539_10310682 3300009094 Bacteria 1835
74 Ga0105245_10065099 3300009098 Bacteria 3296
75 Ga0114129_10000358 3300009147 Bacteria 52801
76 Ga0114129_10003429 3300009147 Bacteria 22286
77 Ga0114129_10037452 3300009147 Bacteria 6847
78 Ga0114129_10055906 3300009147 Bacteria 5531
79 Ga0114129_10083032 3300009147 Bacteria 4451
80 Ga0114129_10084367 3300009147 Bacteria 4411
81 Ga0105248_10019128 3300009177 Bacteria 7576
82 Ga0105248_10023761 3300009177 Bacteria 6812
83 Ga0105248_10090014 3300009177 Bacteria 3455
84 Ga0105248_10106929 3300009177 Bacteria 3155
85 Ga0105248_10190515 3300009177 Bacteria 2311
86 Ga0105237_10000015 3300009545 Bacteria 266079
87 Ga0105249_10022608 3300009553 Bacteria 5634
88 Ga0157378_10063142 3300013297 Bacteria 3309
89 Ga0163162_10063770 3300013306 Bacteria 3729
90 Ga0157375_10021674 3300013308 Bacteria 5898
91 Ga0157375_10147704 3300013308 Bacteria 2483
92 Ga0163163_10000240 3300014325 Bacteria 55940
93 Ga0163163_10076882 3300014325 Bacteria 3334
94 Ga0157380_10113325 3300014326 Bacteria 2283
95 Ga0157376_10025986 3300014969 Bacteria 4620
96 Ga0157376_10109263 3300014969 Bacteria 2431
97 Ga0209760_100109 3300025207 Bacteria 58898
98 Ga0207427_100114 3300025231 Bacteria 104357
99 Ga0209437_100219 3300025233 Bacteria 104357
100 Ga0209233_1000012 3300025261 Bacteria 1019519
101 Ga0209025_1001936 3300025294 Bacteria 23930
102 Ga0207697_10015854 3300025315 Bacteria 3109
103 Ga0207688_10026590 3300025901 Bacteria 3183
104 Ga0207688_10094602 3300025901 Bacteria 1719
105 Ga0207645_10025917 3300025907 Bacteria 3792
106 Ga0207707_10078144 3300025912 Bacteria 2889
107 Ga0207671_10000007 3300025914 Bacteria 825758
108 Ga0207660_10041872 3300025917 Bacteria 3212
109 Ga0207662_10003320 3300025918 Bacteria 8255
110 Ga0207652_10042128 3300025921 Bacteria 3884
111 Ga0207650_10040510 3300025925 Bacteria 3409
112 Ga0207650_10093340 3300025925 Bacteria 2303
113 Ga0207659_10000718 3300025926 Bacteria 19698
114 Ga0207687_10049114 3300025927 Bacteria 2932
115 Ga0207700_10159400 3300025928 Bacteria 1873
116 Ga0207691_10061253 3300025940 Bacteria 3418
117 Ga0207711_10076211 3300025941 Bacteria 2920
118 Ga0207711_10130776 3300025941 Bacteria 2250
119 Ga0207689_10010386 3300025942 Bacteria 8020
120 Ga0207661_10235528 3300025944 Bacteria 1623
121 Ga0207679_10002281 3300025945 Bacteria 11832
122 Ga0207679_10022240 3300025945 Bacteria 4314
123 Ga0207679_10054670 3300025945 Bacteria 2940
124 Ga0207651_10091600 3300025960 Bacteria 2227
125 Ga0207712_10003463 3300025961 Bacteria 9965
126 Ga0207712_10044085 3300025961 Bacteria 3081
127 Ga0207703_10077859 3300026035 Bacteria 2753
128 Ga0207641_10119028 3300026088 Bacteria 2353
129 Ga0207676_10032506 3300026095 Bacteria 3933
130 Ga0207674_10010897 3300026116 Bacteria 10240
131 Ga0207674_10292487 3300026116 Bacteria 1577
132 Ga0207675_100000197 3300026118 Bacteria 55600
133 Ga0207683_10011847 3300026121 Bacteria 7439
134 Ga0207428_10106728 3300027907 Bacteria 2159
135 Ga0268266_10022292 3300028379 Bacteria 5397
136 Ga0268265_10035569 3300028380 Bacteria 3641
137 Ga0268264_10142767 3300028381 Bacteria 2137
138 Ga0307515_10068538 3300028794 Bacteria 4872
139 Ga0265338_10016656 3300028800 Bacteria 7971
140 Ga0307408_100002006 3300031548 Bacteria 14703
141 Ga0316575_10010260 3300031665 Bacteria 3436
142 Ga0316575_10010428 3300031665 Bacteria 3415
143 Ga0316579_10028838 3300031691 Bacteria 2529
144 Ga0316576_10000849 3300031727 Bacteria 15507
145 Ga0316576_10012731 3300031727 Bacteria 5565
146 Ga0316576_10021762 3300031727 Bacteria 4440
147 Ga0316576_10034159 3300031727 Bacteria 3624
148 Ga0316576_10067827 3300031727 Bacteria 2627
149 Ga0316576_10108790 3300031727 Bacteria 2077
150 Ga0316578_10005100 3300031728 Bacteria 6322
151 Ga0316578_10011957 3300031728 Bacteria 4564
152 Ga0316578_10022136 3300031728 Bacteria 3539
153 Ga0307405_10015491 3300031731 Bacteria 4132
154 Ga0307413_10001012 3300031824 Bacteria 10160
155 Ga0307410_10001656 3300031852 Bacteria 10246
156 Ga0307410_10003004 3300031852 Bacteria 8326
157 Ga0307410_10015549 3300031852 Bacteria 4517
158 Ga0307406_10014688 3300031901 Bacteria 4510
159 Ga0307406_10020451 3300031901 Bacteria 3898
160 Ga0307412_10023940 3300031911 Bacteria 3765
161 Ga0307412_10024997 3300031911 Bacteria 3694
162 Ga0307409_100000744 3300031995 Bacteria 14663
163 Ga0307409_100001517 3300031995 Bacteria 11492
164 Ga0307416_100000378 3300032002 Bacteria 23099
165 Ga0307416_100000758 3300032002 Bacteria 16898
166 Ga0307416_100042152 3300032002 Bacteria 3560
167 Ga0307416_100066246 3300032002 Bacteria 2973
168 Ga0307414_10053192 3300032004 Bacteria 2823
169 Ga0307414_10064513 3300032004 Bacteria 2608
170 Ga0307414_10142132 3300032004 Bacteria 1880
171 Ga0307411_10007405 3300032005 Bacteria 5589
172 Ga0307411_10022178 3300032005 Bacteria 3733
173 Ga0307415_100000254 3300032126 Bacteria 23073
174 Ga0307415_100001363 3300032126 Bacteria 11631
175 Ga0316583_10016100 3300032133 Bacteria 2692
176 Ga0316583_10041699 3300032133 Bacteria 1624
177 Ga0316585_10008305 3300032137 Bacteria 3010
178 Ga0373930_0000595 3300034816 Bacteria 5003
179 Ga0373938_0001268 3300034957 Bacteria 4055
180 Ga0373929_0008472 3300035085 Bacteria 1895
181 Ga0373940_0006975 3300035088 Bacteria 2533
182 Ga0373951_0008183 3300035091 Bacteria 2368
183 Ga0373939_0012620 3300035114 Bacteria 2157
184 Ga0373960_0020484 3300035121 Bacteria 1749
185 Ga0373946_0100921 3300035171 Bacteria 1294
186 Ga0373955_0074221 3300035172 Bacteria 1908
187 Ga0373961_0009943 3300035241 Bacteria 2335
188 Ga0373962_0003029 3300035242 Bacteria 4024
189 Ga0316574_0001193 3300035398 Bacteria 12063
190 Ga0316574_0009980 3300035398 Bacteria 5343
191 Ga0373927_0072005 3300035695 Bacteria 2237
192 Ga0316584_0157859 3300036712 Bacteria 1686
193 Ga0373925_0050761 3300037068 Bacteria 3095
194 Ga0439453_0011239 3300041408 Bacteria 1491
195 Ga0439466_0007192 3300041411 Bacteria 4211
196 Ga0439466_0011236 3300041411 Bacteria 3314
197 Ga0451807_0349962 3300041486 Bacteria 1956
198 Ga0439451_002959 3300042009 Bacteria 3452
199 Ga0439446_0012554 3300042156 Bacteria 2313
200 Ga0439434_0003099 3300042435 Bacteria 4880
201 Ga0439435_0004925 3300042436 Bacteria 2906
202 Ga0453683_0018303 3300044673 Bacteria 4498
203 Ga0453683_0089905 3300044673 Bacteria 1925
204 Ga0451576_0000188 3300045051 Bacteria 155095
205 Ga0451576_0059452 3300045051 Bacteria 3989
206 Ga0451576_0196198 3300045051 Bacteria 2109
207 Ga0451576_0384278 3300045051 Bacteria 1471
208 Ga0495592_0066822 3300046454 Bacteria 2630
209 Ga0495629_0106931 3300046459 Bacteria 1952
210 Ga0495580_0016929 3300046472 Bacteria 5462
211 Ga0495580_0043156 3300046472 Bacteria 3210
212 Ga0495662_0043530 3300046476 Bacteria 2167
213 Ga0495606_0006582 3300046507 Bacteria 10683
214 Ga0495666_0002902 3300046526 Bacteria 8586
215 Ga0495665_0013889 3300046531 Bacteria 4349
216 Ga0495658_0049381 3300046683 Bacteria 2376
217 Ga0495671_0010530 3300046692 Bacteria 5117
218 Ga0495604_0004609 3300047317 Bacteria 10920
219 Ga0495636_0004423 3300047318 Bacteria 5500
220 Ga0495672_0002833 3300047320 Bacteria 15425
221 Ga0495672_0006214 3300047320 Bacteria 9313
222 Ga0495687_000538 3300047443 Bacteria 45144
223 Ga0496110_0233462 3300048913 Bacteria 1673
224 Ga0496112_0023551 3300048915 Bacteria 5884
225 Ga0496113_0027834 3300048916 Bacteria 4057
226 Ga0495682_0000299 3300049460 Bacteria 37573
227 Ga0501034_0061514 3300049571 Bacteria 3770
228 Ga0501037_0020620 3300049573 Bacteria 4866
229 Ga0501037_0184592 3300049573 Bacteria 1479
230 Ga0501040_0013971 3300049576 Bacteria 5286
231 Ga0501041_0001879 3300049577 Bacteria 11771
232 Ga0501042_0000824 3300049578 Bacteria 17198
233 Ga0501043_0113689 3300049579 Bacteria 2126
234 Ga0501046_0035155 3300049580 Bacteria 4039
235 Ga0501047_0112172 3300049581 Bacteria 2609
236 Ga0501048_0014816 3300049582 Bacteria 5767
237 Ga0501067_0053141 3300049583 Bacteria 2245
238 Ga0501068_0003929 3300049584 Bacteria 8085
239 Ga0501071_0091400 3300049587 Bacteria 2236
240 Ga0501072_0012568 3300049588 Bacteria 6471
241 Ga0501073_0062310 3300049589 Bacteria 2602
242 Ga0501073_0117295 3300049589 Bacteria 1844
243 Ga0501075_0000077 3300049591 Bacteria 44211
244 Ga0501075_0008474 3300049591 Bacteria 7171
245 Ga0501076_0003363 3300049592 Bacteria 11228
246 Ga0501077_0060366 3300049593 Bacteria 2407
247 Ga0501198_000040 3300049649 Bacteria 46964
248 Ga0501209_004255 3300049656 Bacteria 2462
249 Ga0501222_000029 3300049662 Bacteria 61536
250 Ga0501079_0001078 3300049741 Bacteria 18966
251 Ga0501080_0040338 3300049742 Bacteria 4354
252 Ga0501080_0306534 3300049742 Bacteria 1440
253 Ga0501081_0007979 3300049743 Bacteria 6870
254 Ga0501045_0009739 3300049824 Bacteria 6722
255 nmdc:mga06z11_12139_c1 3300050494 Bacteria 3738
256 nmdc:mga07m45_4635_c1 3300050496 Bacteria 6744
257 nmdc:mga05p37_108314_c1 3300050507 Bacteria 3418
258 nmdc:mga05p37_158_c1 3300050507 Bacteria 65027
259 nmdc:mga05p37_266158_c1 3300050507 Bacteria 2050
260 nmdc:mga05p37_59814_c1 3300050507 Bacteria 4691
261 nmdc:mga05p37_8536_c1 3300050507 Bacteria 4974
262 nmdc:mga06r32_132435_c1 3300050510 Bacteria 2466
263 nmdc:mga08y16_17803_c1 3300050511 Bacteria 7484
264 nmdc:mga08y16_186201_c1 3300050511 Bacteria 2154
265 nmdc:mga08y16_349130_c1 3300050511 Bacteria 1520
266 nmdc:mga0n895_14834_c1 3300050512 Bacteria 7091
267 nmdc:mga0a205_139977_c1 3300050515 Bacteria 2320
268 nmdc:mga0a205_26108_c1 3300050515 Bacteria 5565
269 nmdc:mga0a205_8475_c1 3300050515 Bacteria 9355
270 Ga0501084_0023006 3300054114 Bacteria 5202
271 Ga0590071_009903 3300059421 Bacteria 2234
272 Ga0501082_0001270 3300060353 Bacteria 22170
273 Ga0501082_0133176 3300060353 Bacteria 2156
274 Ga0530510_0001174 3300061734 Bacteria 17418
275 2511333912 2511231017 Bacteria 6503007
276 2512035150 2511231221 Bacteria 6846400
277 2523104422 2522572158 Bacteria 6514390
278 2599106346 2597490356 Bacteria 7030811
279 2846956144 2846952575 Bacteria 6587527
280 2848861777 2848858292 Bacteria 7391279
281 2897807508 2897803580 Bacteria 7000062
282 8054005612 8054002106 Bacteria 7987183
283 Ga0070690_100036250
284 SwRhRL2b_contig_1874099
285 JGI25162J39368_1000304
286 JGI25163J39215_1000074
287 JGI25164J39214_1000223
288 JGI25165J46597_1000410
289 Ga0065712_10081154
290 Ga0065707_10006434
291 Ga0070670_100050296
292 Ga0070670_100165092
293 Ga0070666_10007139
294 Ga0070666_10058126
295 Ga0070680_100019340
296 Ga0068868_100031083
297 Ga0068868_100096567
298 Ga0070660_100103813
299 Ga0070689_100061838
300 Ga0070661_100025826
301 Ga0070661_100057977
302 Ga0070661_100136473
303 Ga0070692_10015610
304 Ga0070668_100014386
305 Ga0070668_100095383
306 Ga0070669_100008716
307 Ga0070669_100162494
308 Ga0070675_100040420
309 Ga0070688_100049040
310 Ga0070688_100057821
311 Ga0070688_100090978
312 Ga0070659_100009038
313 Ga0070713_100194756
314 Ga0070708_100031386
315 Ga0070678_100003740
316 Ga0070681_10021194
317 Ga0070706_100064466
318 Ga0070707_100002810
319 Ga0070707_100049600
320 Ga0070699_100070565
321 Ga0070699_100237482
322 Ga0070679_100085830
323 Ga0070684_100086419
324 Ga0070704_100045792
325 Ga0068855_100219335
326 Ga0070664_100010453
327 Ga0068857_100011109
328 Ga0068859_100000001
329 Ga0068859_100390812
330 Ga0068864_100018617
331 Ga0068861_100092679
332 Ga0068870_10080214
333 Ga0068863_100025697
334 Ga0068863_100039446
335 Ga0068858_100013205
336 Ga0068862_100012176
337 Ga0075365_10070360
338 Ga0075364_10029834
339 Ga0075364_10057198
340 Ga0075432_10001667
341 Ga0075367_10003718
342 Ga0075366_10100474
343 Ga0097621_100136665
344 Ga0075370_10002749
345 Ga0068871_100079353
346 Ga0075428_100087764
347 Ga0075433_10015607
348 Ga0075434_100136298
349 Ga0075434_100148723
350 Ga0068865_100117537
351 Ga0097620_100000001
352 Ga0097620_100390816
353 Ga0111539_10069389
354 Ga0111539_10171840
355 Ga0111539_10310682
356 Ga0105245_10065099
357 Ga0114129_10000358
358 Ga0114129_10003429
359 Ga0114129_10037452
360 Ga0114129_10055906
361 Ga0114129_10083032
362 Ga0114129_10084367
363 Ga0105248_10019128
364 Ga0105248_10023761
365 Ga0105248_10090014
366 Ga0105248_10106929
367 Ga0105248_10190515
368 Ga0105237_10000015
369 Ga0105249_10022608
370 Ga0157378_10063142
371 Ga0163162_10063770
372 Ga0157375_10021674
373 Ga0157375_10147704
374 Ga0163163_10000240
375 Ga0163163_10076882
376 Ga0157380_10113325
377 Ga0157376_10025986
378 Ga0157376_10109263
379 Ga0209760_100109
380 Ga0207427_100114
381 Ga0209437_100219
382 Ga0209233_1000012
383 Ga0209025_1001936
384 Ga0207697_10015854
385 Ga0207688_10026590
386 Ga0207688_10094602
387 Ga0207645_10025917
388 Ga0207707_10078144
389 Ga0207671_10000007
390 Ga0207660_10041872
391 Ga0207662_10003320
392 Ga0207652_10042128
393 Ga0207650_10040510
394 Ga0207650_10093340
395 Ga0207659_10000718
396 Ga0207687_10049114
397 Ga0207700_10159400
398 Ga0207691_10061253
399 Ga0207711_10076211
400 Ga0207711_10130776
401 Ga0207689_10010386
402 Ga0207661_10235528
403 Ga0207679_10002281
404 Ga0207679_10022240
405 Ga0207679_10054670
406 Ga0207651_10091600
407 Ga0207712_10003463
408 Ga0207712_10044085
409 Ga0207703_10077859
410 Ga0207641_10119028
411 Ga0207676_10032506
412 Ga0207674_10010897
413 Ga0207674_10292487
414 Ga0207675_100000197
415 Ga0207683_10011847
416 Ga0207428_10106728
417 Ga0268266_10022292
418 Ga0268265_10035569
419 Ga0268264_10142767
420 Ga0307515_10068538
421 Ga0265338_10016656
422 Ga0307408_100002006
423 Ga0316575_10010260
424 Ga0316575_10010428
425 Ga0316579_10028838
426 Ga0316576_10000849
427 Ga0316576_10012731
428 Ga0316576_10021762
429 Ga0316576_10034159
430 Ga0316576_10067827
431 Ga0316576_10108790
432 Ga0316578_10005100
433 Ga0316578_10011957
434 Ga0316578_10022136
435 Ga0307405_10015491
436 Ga0307413_10001012
437 Ga0307410_10001656
438 Ga0307410_10003004
439 Ga0307410_10015549
440 Ga0307406_10014688
441 Ga0307406_10020451
442 Ga0307412_10023940
443 Ga0307412_10024997
444 Ga0307409_100000744
445 Ga0307409_100001517
446 Ga0307416_100000378
447 Ga0307416_100000758
448 Ga0307416_100042152
449 Ga0307416_100066246
450 Ga0307414_10053192
451 Ga0307414_10064513
452 Ga0307414_10142132
453 Ga0307411_10007405
454 Ga0307411_10022178
455 Ga0307415_100000254
456 Ga0307415_100001363
457 Ga0316583_10016100
458 Ga0316583_10041699
459 Ga0316585_10008305
460 Ga0373930_0000595
461 Ga0373938_0001268
462 Ga0373929_0008472
463 Ga0373940_0006975
464 Ga0373951_0008183
465 Ga0373939_0012620
466 Ga0373960_0020484
467 Ga0373946_0100921
468 Ga0373955_0074221
469 Ga0373961_0009943
470 Ga0373962_0003029
471 Ga0316574_0001193
472 Ga0316574_0009980
473 Ga0373927_0072005
474 Ga0316584_0157859
475 Ga0373925_0050761
476 Ga0439453_0011239
477 Ga0439466_0007192
478 Ga0439466_0011236
479 Ga0451807_0349962
480 Ga0439451_002959
481 Ga0439446_0012554
482 Ga0439434_0003099
483 Ga0439435_0004925
484 Ga0453683_0018303
485 Ga0453683_0089905
486 Ga0451576_0000188
487 Ga0451576_0059452
488 Ga0451576_0196198
489 Ga0451576_0384278
490 Ga0495592_0066822
491 Ga0495629_0106931
492 Ga0495580_0016929
493 Ga0495580_0043156
494 Ga0495662_0043530
495 Ga0495606_0006582
496 Ga0495666_0002902
497 Ga0495665_0013889
498 Ga0495658_0049381
499 Ga0495671_0010530
500 Ga0495604_0004609
501 Ga0495636_0004423
502 Ga0495672_0002833
503 Ga0495672_0006214
504 Ga0495687_000538
505 Ga0496110_0233462
506 Ga0496112_0023551
507 Ga0496113_0027834
508 Ga0495682_0000299
509 Ga0501034_0061514
510 Ga0501037_0020620
511 Ga0501037_0184592
512 Ga0501040_0013971
513 Ga0501041_0001879
514 Ga0501042_0000824
515 Ga0501043_0113689
516 Ga0501046_0035155
517 Ga0501047_0112172
518 Ga0501048_0014816
519 Ga0501067_0053141
520 Ga0501068_0003929
521 Ga0501071_0091400
522 Ga0501072_0012568
523 Ga0501073_0062310
524 Ga0501073_0117295
525 Ga0501075_0000077
526 Ga0501075_0008474
527 Ga0501076_0003363
528 Ga0501077_0060366
529 Ga0501198_000040
530 Ga0501209_004255
531 Ga0501222_000029
532 Ga0501079_0001078
533 Ga0501080_0040338
534 Ga0501080_0306534
535 Ga0501081_0007979
536 Ga0501045_0009739
537 nmdc:mga06z11_12139_c1
538 nmdc:mga07m45_4635_c1
539 nmdc:mga05p37_108314_c1
540 nmdc:mga05p37_158_c1
541 nmdc:mga05p37_266158_c1
542 nmdc:mga05p37_59814_c1
543 nmdc:mga05p37_8536_c1
544 nmdc:mga06r32_132435_c1
545 nmdc:mga08y16_17803_c1
546 nmdc:mga08y16_186201_c1
547 nmdc:mga08y16_349130_c1
548 nmdc:mga0n895_14834_c1
549 nmdc:mga0a205_139977_c1
550 nmdc:mga0a205_26108_c1
551 nmdc:mga0a205_8475_c1
552 Ga0501084_0023006
553 Ga0590071_009903
554 Ga0501082_0001270
555 Ga0501082_0133176
556 Ga0530510_0001174
557 2511333912
558 2512035150
559 2523104422
560 2599106346
561 2846956144
562 2848861777
563 2897807508
564 8054005612

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

69

438

0.99

PF01212

Beta_elim_lyase

Beta-eliminating lyase

105

423

0.8

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

93

260

0.79

PF00155

Aminotran_1_2

Aminotransferase class I and II

69

295

0.75

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

65

274

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c9e-assembly1.cif.gz_A crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 0.9903 8 409
4w91-assembly5.cif.gz_I crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9885 8 407
4w91-assembly3.cif.gz_E crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9876 8 407
7ceq-assembly1.cif.gz_A crystal structure of cysteine desulfurase sufs h121a from bacillus subtilis 0.987 8 407
4w91-assembly4.cif.gz_H crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9869 8 407
ID Description Score Start End Superfamily
af_Q2FZY5_42_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9906 39 295 3.40.640.10
af_A0A368UH16_90_350_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9886 39 298 3.40.640.10
af_Q0INV6_1_200_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9873 92 289 3.40.640.10
af_Q2FZY5_42_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9868 39 295 3.40.640.10
1i29A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9864 42 298 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A1F3TQ85-F1-model_v4 Cysteine desulfurase (EC 2.8.1.7) 0.9944 8 409 GO:0006534
GO:0030170
GO:0031071
AF-A0A3M1HW76-F1-model_v4 Cysteine desulfurase (EC 2.8.1.7) 0.9937 8 409 GO:0006534
GO:0030170
GO:0031071
AF-A0A352IRB3-F1-model_v4 Cysteine desulfurase CsdA 0.9925 129 277
AF-A0A515KL27-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.9922 8 409 GO:0006534
GO:0030170
GO:0031071
AF-A0A1Q7JQJ4-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.9922 9 295 GO:0006534
GO:0030170
GO:0031071

Map