F384343

General Info

Members Datasets Scaffolds Average Seq Length
281 151 562 531

Family's Representative Sequence

Representative Sequence 3300025942|Ga0207689_10024484|Ga0207689_100244842
Length 568
Sequence VPRKGSGLSDIKQAVTIPLLYTKNSINRKQKGLMTPSQIKVFVADEVSDSGLQPLRDSGITVEKRVGLGQNELREALKDCAGLVVRSETKVTSDLMDSTTALRVVGRAGVGVDNIDVPAATERGIVVMNAPDGNTITTAEHTIALLIALARRIPQANTSLKSGRWERKTFIGVELQGKTLGVVGMGRIGRTVAARARAFGMKIVAFDPFIAPEQARDAEIELAPLDELFANADFITVHTPLTAETRGVIGRDAFAKMKKGVRIINCARGGLVDESALYDAIKSGTVAGAALDVFVEEPPARDHPLLMLDEVIVTPHLGASTTEAQEGVAFTVAEQMRDYLLSGALRGAVNVPALGTKELALLRPYIELAEKLGRFQAQLVDSAVREVKIEFAGELVELNAAPVTRSFLAGLLRDVSARVNAVNAFLIAEERGIKVTTSYFRATADFVPGIRTHVLSGGSEQSLAGTIFGFGEQAREGRITEIDGFHIEATPRGHMLVMRNRDVPGVIGRVGTILGEHEINISRFHLGRRERGGEAMAVIEVDAAADAETLDALRSLAEILSVRVIELI

Samples

Sample ID Description Type Environment
1 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
121 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
128 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
129 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
134 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
135 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
142 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
143 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.07
Rhizosphere 97.86
Stem 0
Stem Tuber 0
Unclassified 10.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207689_10024484 3300025942 Bacteria 5065
2 JGI24034J26672_10000051 3300002239 Bacteria 49831
3 JGI24751J29686_10001622 3300002459 Bacteria 4641
4 JGI25406J46586_10028027 3300003203 Unclassified 2151
5 rootL2_10235271 3300003322 Bacteria 2284
6 Ga0065714_10064432 3300005288 Bacteria 133542
7 Ga0065704_10083248 3300005289 Bacteria 3490
8 Ga0065712_10011722 3300005290 Bacteria 2088
9 Ga0065712_10067730 3300005290 Bacteria 133482
10 Ga0065715_10015073 3300005293 Bacteria 5299
11 Ga0065715_10090574 3300005293 Bacteria 6805
12 Ga0065715_10093606 3300005293 Bacteria 4625
13 Ga0070690_100095362 3300005330 Bacteria 1964
14 Ga0070670_100001195 3300005331 Bacteria 20613
15 Ga0070670_100055175 3300005331 Unclassified 3411
16 Ga0068869_100005533 3300005334 Bacteria 7953
17 Ga0070666_10018152 3300005335 Unclassified 4519
18 Ga0070680_100017967 3300005336 Bacteria 5584
19 Ga0070682_100013396 3300005337 Bacteria 4716
20 Ga0068868_100061796 3300005338 Bacteria 2968
21 Ga0070689_100013268 3300005340 Bacteria 5958
22 Ga0070689_100016479 3300005340 Bacteria 5408
23 Ga0070669_100027761 3300005353 Unclassified 4074
24 Ga0070671_100043599 3300005355 Bacteria 3728
25 Ga0070673_100051968 3300005364 Bacteria 3213
26 Ga0070659_100002871 3300005366 Bacteria 12270
27 Ga0070659_100087238 3300005366 Bacteria 2498
28 Ga0070705_100014057 3300005440 Bacteria 4108
29 Ga0070705_100076701 3300005440 Bacteria 2039
30 Ga0070700_100000101 3300005441 Bacteria 53894
31 Ga0070700_100011351 3300005441 Bacteria 4933
32 Ga0070700_100029644 3300005441 Bacteria 3264
33 Ga0070700_100037089 3300005441 Bacteria 2962
34 Ga0070694_100001551 3300005444 Bacteria 13513
35 Ga0070694_100004757 3300005444 Bacteria 8178
36 Ga0070694_100041731 3300005444 Bacteria 3062
37 Ga0070694_100148575 3300005444 Bacteria 1709
38 Ga0070708_100005976 3300005445 Bacteria 9676
39 Ga0070708_100115148 3300005445 Bacteria 2474
40 Ga0070662_100059110 3300005457 Bacteria 2792
41 Ga0070662_100072276 3300005457 Bacteria 2546
42 Ga0070681_10005090 3300005458 Bacteria 12682
43 Ga0070681_10007795 3300005458 Bacteria 10470
44 Ga0070681_10056068 3300005458 Unclassified 3922
45 Ga0070685_10016448 3300005466 Unclassified 3942
46 Ga0070706_100000209 3300005467 Bacteria 71999
47 Ga0070706_100002273 3300005467 Bacteria 19457
48 Ga0070706_100056194 3300005467 Bacteria 3633
49 Ga0070706_100088775 3300005467 Bacteria 2866
50 Ga0070706_100145320 3300005467 Bacteria 2214
51 Ga0070707_100011727 3300005468 Bacteria 8181
52 Ga0070707_100072862 3300005468 Bacteria 3311
53 Ga0070698_100000847 3300005471 Bacteria 33519
54 Ga0070698_100000886 3300005471 Bacteria 32912
55 Ga0070698_100006295 3300005471 Bacteria 12896
56 Ga0070698_100021435 3300005471 Bacteria 6768
57 Ga0070698_100024305 3300005471 Bacteria 6321
58 Ga0070698_100087491 3300005471 Bacteria 3101
59 Ga0070698_100089317 3300005471 Bacteria 3065
60 Ga0070698_100096118 3300005471 Bacteria 2939
61 Ga0070698_100130511 3300005471 Bacteria 2468
62 Ga0070699_100001663 3300005518 Bacteria 20300
63 Ga0070699_100002861 3300005518 Bacteria 15387
64 Ga0070699_100021377 3300005518 Bacteria 5582
65 Ga0070699_100025213 3300005518 Bacteria 5128
66 Ga0070699_100148660 3300005518 Bacteria 2071
67 Ga0070679_100000183 3300005530 Bacteria 50514
68 Ga0070697_100000117 3300005536 Bacteria 62404
69 Ga0070697_100000253 3300005536 Bacteria 43200
70 Ga0070697_100011145 3300005536 Bacteria 7025
71 Ga0070697_100042735 3300005536 Bacteria 3668
72 Ga0068853_100014208 3300005539 Bacteria 6515
73 Ga0068853_100042072 3300005539 Unclassified 3905
74 Ga0070686_100032052 3300005544 Bacteria 3219
75 Ga0070686_100047715 3300005544 Bacteria 2709
76 Ga0070695_100021012 3300005545 Bacteria 3990
77 Ga0070696_100028177 3300005546 Bacteria 3832
78 Ga0070693_100026703 3300005547 Bacteria 3119
79 Ga0070704_100025397 3300005549 Bacteria 3900
80 Ga0070664_100028341 3300005564 Unclassified 4658
81 Ga0070702_100009087 3300005615 Bacteria 4849
82 Ga0070702_100081146 3300005615 Bacteria 1943
83 Ga0068852_100043860 3300005616 Bacteria 3795
84 Ga0068852_100191384 3300005616 Bacteria 1931
85 Ga0068859_100026893 3300005617 Bacteria 5770
86 Ga0068859_100058310 3300005617 Bacteria 3889
87 Ga0068859_100064233 3300005617 Bacteria 3703
88 Ga0068859_100068719 3300005617 Bacteria 3577
89 Ga0068859_100077160 3300005617 Bacteria 3373
90 Ga0068859_100162188 3300005617 Unclassified 2315
91 Ga0068864_100013958 3300005618 Bacteria 6660
92 Ga0068864_100051794 3300005618 Bacteria 3537
93 Ga0068864_100083642 3300005618 Unclassified 2803
94 Ga0068863_100117287 3300005841 Bacteria 2537
95 Ga0068858_100000567 3300005842 Bacteria 38567
96 Ga0068860_100032231 3300005843 Bacteria 5037
97 Ga0068860_100059687 3300005843 Bacteria 3626
98 Ga0068860_100073648 3300005843 Unclassified 3247
99 Ga0068860_100074883 3300005843 Bacteria 3220
100 Ga0068860_100075972 3300005843 Bacteria 3194
101 Ga0068862_100035723 3300005844 Bacteria 4211
102 Ga0068862_100057889 3300005844 Bacteria 3325
103 Ga0081539_10000022 3300005985 Bacteria 356710
104 Ga0081539_10000823 3300005985 Bacteria 59946
105 Ga0081539_10001922 3300005985 Bacteria 32066
106 Ga0070715_10000349 3300006163 Bacteria 11566
107 Ga0070716_100000475 3300006173 Bacteria 16608
108 Ga0097621_100010088 3300006237 Bacteria 6890
109 Ga0097621_100072777 3300006237 Bacteria 2844
110 Ga0068871_100002708 3300006358 Bacteria 12092
111 Ga0075430_100075898 3300006846 Bacteria 2817
112 Ga0075431_100206117 3300006847 Bacteria 2010
113 Ga0075433_10035096 3300006852 Bacteria 4311
114 Ga0075434_100098945 3300006871 Bacteria 2922
115 Ga0075434_100100132 3300006871 Bacteria 2904
116 Ga0075436_100000026 3300006914 Bacteria 102984
117 Ga0075436_100010235 3300006914 Bacteria 6421
118 Ga0097620_100026897 3300006931 Bacteria 5770
119 Ga0097620_100058308 3300006931 Bacteria 3889
120 Ga0097620_100064231 3300006931 Bacteria 3703
121 Ga0097620_100068720 3300006931 Bacteria 3577
122 Ga0097620_100077158 3300006931 Bacteria 3373
123 Ga0097620_100162177 3300006931 Unclassified 2315
124 Ga0075435_100005797 3300007076 Bacteria 8677
125 Ga0105251_10016483 3300009011 Bacteria 3991
126 Ga0111539_10013370 3300009094 Bacteria 10259
127 Ga0111539_10027786 3300009094 Bacteria 6910
128 Ga0111539_10030523 3300009094 Bacteria 6551
129 Ga0105247_10000252 3300009101 Bacteria 49875
130 Ga0114129_10021832 3300009147 Bacteria 9086
131 Ga0114129_10036160 3300009147 Bacteria 6975
132 Ga0114129_10065029 3300009147 Bacteria 5091
133 Ga0114129_10075192 3300009147 Unclassified 4703
134 Ga0114129_10080097 3300009147 Bacteria 4540
135 Ga0114129_10114396 3300009147 Bacteria 3720
136 Ga0114129_10253972 3300009147 Unclassified 2359
137 Ga0105243_10000169 3300009148 Bacteria 74793
138 Ga0105243_10027300 3300009148 Bacteria 4373
139 Ga0105243_10141786 3300009148 Bacteria 2051
140 Ga0105242_10000692 3300009176 Bacteria 26430
141 Ga0105242_10002242 3300009176 Bacteria 15254
142 Ga0105242_10022295 3300009176 Bacteria 4978
143 Ga0105248_10036793 3300009177 Bacteria 5474
144 Ga0105248_10056392 3300009177 Unclassified 4408
145 Ga0105248_10064587 3300009177 Bacteria 4109
146 Ga0105248_10205429 3300009177 Bacteria 2220
147 Ga0105237_10001054 3300009545 Bacteria 37030
148 Ga0105237_10046471 3300009545 Bacteria 4366
149 Ga0105237_10130542 3300009545 Bacteria 2507
150 Ga0105249_10000112 3300009553 Bacteria 108891
151 Ga0105249_10001548 3300009553 Bacteria 20182
152 Ga0105249_10018744 3300009553 Bacteria 6164
153 Ga0157373_10009412 3300013100 Bacteria 7215
154 Ga0157378_10008817 3300013297 Bacteria 8780
155 Ga0157378_10015672 3300013297 Bacteria 6637
156 Ga0157378_10043158 3300013297 Bacteria 4003
157 Ga0157378_10062908 3300013297 Bacteria 3315
158 Ga0163162_10000055 3300013306 Bacteria 109443
159 Ga0163162_10004344 3300013306 Bacteria 13644
160 Ga0163162_10010306 3300013306 Bacteria 9082
161 Ga0163162_10020673 3300013306 Bacteria 6470
162 Ga0163162_10032975 3300013306 Bacteria 5143
163 Ga0163162_10046964 3300013306 Bacteria 4328
164 Ga0163162_10228667 3300013306 Bacteria 1990
165 Ga0157375_10054164 3300013308 Bacteria 3950
166 Ga0157375_10061433 3300013308 Bacteria 3730
167 Ga0163163_10000334 3300014325 Bacteria 45303
168 Ga0163163_10003583 3300014325 Bacteria 13190
169 Ga0163163_10006539 3300014325 Bacteria 10204
170 Ga0163163_10071774 3300014325 Bacteria 3451
171 Ga0163163_10174441 3300014325 Bacteria 2196
172 Ga0157380_10001270 3300014326 Bacteria 16394
173 Ga0157380_10022679 3300014326 Bacteria 4732
174 Ga0157376_10028020 3300014969 Bacteria 4473
175 Ga0213876_10011673 3300021384 Bacteria 4690
176 Ga0207653_10000177 3300025885 Bacteria 44860
177 Ga0207653_10008606 3300025885 Bacteria 3180
178 Ga0207642_10008397 3300025899 Bacteria 3539
179 Ga0207710_10000001 3300025900 Bacteria 1797433
180 Ga0207710_10001782 3300025900 Bacteria 10399
181 Ga0207647_10001341 3300025904 Bacteria 18918
182 Ga0207685_10000074 3300025905 Bacteria 23654
183 Ga0207684_10000472 3300025910 Bacteria 52157
184 Ga0207684_10003803 3300025910 Bacteria 14561
185 Ga0207684_10044088 3300025910 Unclassified 3782
186 Ga0207684_10060067 3300025910 Unclassified 3228
187 Ga0207684_10117487 3300025910 Bacteria 2279
188 Ga0207654_10082981 3300025911 Unclassified 1934
189 Ga0207707_10000022 3300025912 Bacteria 198808
190 Ga0207695_10169183 3300025913 Unclassified 2112
191 Ga0207671_10011510 3300025914 Bacteria 7189
192 Ga0207660_10002042 3300025917 Bacteria 13426
193 Ga0207652_10001380 3300025921 Bacteria 21618
194 Ga0207646_10012090 3300025922 Bacteria 8310
195 Ga0207646_10149347 3300025922 Bacteria 2107
196 Ga0207681_10015272 3300025923 Unclassified 4788
197 Ga0207650_10000332 3300025925 Bacteria 45789
198 Ga0207650_10014042 3300025925 Bacteria 5561
199 Ga0207644_10000322 3300025931 Bacteria 31217
200 Ga0207690_10036960 3300025932 Unclassified 3167
201 Ga0207690_10071393 3300025932 Bacteria 2394
202 Ga0207706_10067322 3300025933 Bacteria 3151
203 Ga0207706_10079422 3300025933 Bacteria 2885
204 Ga0207706_10110488 3300025933 Bacteria 2418
205 Ga0207686_10000082 3300025934 Bacteria 79873
206 Ga0207686_10000945 3300025934 Bacteria 17378
207 Ga0207709_10000219 3300025935 Bacteria 72376
208 Ga0207704_10044555 3300025938 Bacteria 2629
209 Ga0207665_10001291 3300025939 Bacteria 16936
210 Ga0207691_10017578 3300025940 Bacteria 6778
211 Ga0207711_10002023 3300025941 Bacteria 18347
212 Ga0207689_10008129 3300025942 Bacteria 9152
213 Ga0207689_10073578 3300025942 Bacteria 2807
214 Ga0207689_10126571 3300025942 Bacteria 2102
215 Ga0207651_10005409 3300025960 Bacteria 6549
216 Ga0207712_10000416 3300025961 Bacteria 36519
217 Ga0207668_10052127 3300025972 Bacteria 2829
218 Ga0207677_10079577 3300026023 Bacteria 2344
219 Ga0207703_10002183 3300026035 Bacteria 17177
220 Ga0207639_10048982 3300026041 Unclassified 3201
221 Ga0207708_10000092 3300026075 Bacteria 70135
222 Ga0207708_10011304 3300026075 Bacteria 6645
223 Ga0207708_10024645 3300026075 Bacteria 4550
224 Ga0207676_10003512 3300026095 Bacteria 11092
225 Ga0207676_10028053 3300026095 Bacteria 4201
226 Ga0207676_10046281 3300026095 Bacteria 3365
227 Ga0207676_10060217 3300026095 Unclassified 3002
228 Ga0207674_10076417 3300026116 Bacteria 3357
229 Ga0207674_10218396 3300026116 Bacteria 1854
230 Ga0207675_100001303 3300026118 Bacteria 25027
231 Ga0207675_100023712 3300026118 Bacteria 5708
232 Ga0207675_100025787 3300026118 Bacteria 5470
233 Ga0207675_100091633 3300026118 Bacteria 2858
234 Ga0207428_10018905 3300027907 Bacteria 5876
235 Ga0268264_10016643 3300028381 Bacteria 6021
236 Ga0268264_10018095 3300028381 Bacteria 5763
237 Ga0268264_10027184 3300028381 Bacteria 4673
238 Ga0268264_10070979 3300028381 Bacteria 2949
239 Ga0268264_10096362 3300028381 Unclassified 2562
240 Ga0307408_100017065 3300031548 Bacteria 4855
241 Ga0307405_10081344 3300031731 Archaea 2117
242 Ga0307410_10110322 3300031852 Bacteria 1990
243 Ga0307412_10129933 3300031911 Bacteria 1828
244 Ga0307416_100116168 3300032002 Bacteria 2371
245 Ga0373951_0009592 3300035091 Bacteria 2177
246 Ga0373942_0014380 3300035207 Bacteria 1915
247 Ga0395900_0187847 3300037418 Bacteria 2097
248 Ga0395898_0172279 3300037466 Bacteria 2069
249 Ga0395898_0216530 3300037466 Bacteria 1827
250 Ga0395901_0029166 3300038443 Bacteria 5679
251 Ga0242422_00648 3300038699 Unclassified 2271
252 Ga0436365_0850853 3300039437 Bacteria 7947
253 Ga0439458_0003198 3300042157 Bacteria 3881
254 Ga0439434_0022330 3300042435 Unclassified 1902
255 Ga0495621_0008229 3300046539 Bacteria 3119
256 Ga0496106_0125745 3300048909 Bacteria 2007
257 Ga0496107_0133425 3300048910 Bacteria 1834
258 Ga0496112_0108983 3300048915 Bacteria 2740
259 Ga0501296_000713 3300049519 Bacteria 3284
260 Ga0501298_000848 3300049521 Bacteria 4309
261 Ga0501299_003246 3300049522 Bacteria 2339
262 Ga0501038_0004785 3300049574 Bacteria 12578
263 Ga0501072_0002999 3300049588 Bacteria 12731
264 Ga0501075_0152079 3300049591 Bacteria 1764
265 Ga0501223_005794 3300049663 Bacteria 2582
266 Ga0501223_006067 3300049663 Bacteria 2514
267 Ga0501235_003262 3300049669 Bacteria 3501
268 Ga0501240_000446 3300049673 Bacteria 3348
269 Ga0501229_001040 3300049706 Bacteria 3183
270 Ga0501226_000466 3300049853 Bacteria 5701
271 nmdc:mga05p37_100125_c1 3300050507 Unclassified 3569
272 nmdc:mga0qj67_99524_c1 3300050509 Bacteria 2343
273 nmdc:mga06r32_87942_c1 3300050510 Bacteria 3032
274 nmdc:mga08y16_5984_c1 3300050511 Bacteria 12755
275 nmdc:mga0n895_31785_c1 3300050512 Bacteria 5058
276 nmdc:mga0rr50_576_c1 3300050513 Bacteria 19684
277 nmdc:mga08x19_5268_c1 3300050514 Bacteria 7653
278 nmdc:mga08x19_923_c1 3300050514 Bacteria 18542
279 nmdc:mga0a205_145509_c1 3300050515 Unclassified 2270
280 nmdc:mga0a205_42987_c1 3300050515 Unclassified 4356
281 nmdc:mga0a205_66402_c1 3300050515 Bacteria 3486
282 Ga0207689_10024484
283 JGI24034J26672_10000051
284 JGI24751J29686_10001622
285 JGI25406J46586_10028027
286 rootL2_10235271
287 Ga0065714_10064432
288 Ga0065704_10083248
289 Ga0065712_10011722
290 Ga0065712_10067730
291 Ga0065715_10015073
292 Ga0065715_10090574
293 Ga0065715_10093606
294 Ga0070690_100095362
295 Ga0070670_100001195
296 Ga0070670_100055175
297 Ga0068869_100005533
298 Ga0070666_10018152
299 Ga0070680_100017967
300 Ga0070682_100013396
301 Ga0068868_100061796
302 Ga0070689_100013268
303 Ga0070689_100016479
304 Ga0070669_100027761
305 Ga0070671_100043599
306 Ga0070673_100051968
307 Ga0070659_100002871
308 Ga0070659_100087238
309 Ga0070705_100014057
310 Ga0070705_100076701
311 Ga0070700_100000101
312 Ga0070700_100011351
313 Ga0070700_100029644
314 Ga0070700_100037089
315 Ga0070694_100001551
316 Ga0070694_100004757
317 Ga0070694_100041731
318 Ga0070694_100148575
319 Ga0070708_100005976
320 Ga0070708_100115148
321 Ga0070662_100059110
322 Ga0070662_100072276
323 Ga0070681_10005090
324 Ga0070681_10007795
325 Ga0070681_10056068
326 Ga0070685_10016448
327 Ga0070706_100000209
328 Ga0070706_100002273
329 Ga0070706_100056194
330 Ga0070706_100088775
331 Ga0070706_100145320
332 Ga0070707_100011727
333 Ga0070707_100072862
334 Ga0070698_100000847
335 Ga0070698_100000886
336 Ga0070698_100006295
337 Ga0070698_100021435
338 Ga0070698_100024305
339 Ga0070698_100087491
340 Ga0070698_100089317
341 Ga0070698_100096118
342 Ga0070698_100130511
343 Ga0070699_100001663
344 Ga0070699_100002861
345 Ga0070699_100021377
346 Ga0070699_100025213
347 Ga0070699_100148660
348 Ga0070679_100000183
349 Ga0070697_100000117
350 Ga0070697_100000253
351 Ga0070697_100011145
352 Ga0070697_100042735
353 Ga0068853_100014208
354 Ga0068853_100042072
355 Ga0070686_100032052
356 Ga0070686_100047715
357 Ga0070695_100021012
358 Ga0070696_100028177
359 Ga0070693_100026703
360 Ga0070704_100025397
361 Ga0070664_100028341
362 Ga0070702_100009087
363 Ga0070702_100081146
364 Ga0068852_100043860
365 Ga0068852_100191384
366 Ga0068859_100026893
367 Ga0068859_100058310
368 Ga0068859_100064233
369 Ga0068859_100068719
370 Ga0068859_100077160
371 Ga0068859_100162188
372 Ga0068864_100013958
373 Ga0068864_100051794
374 Ga0068864_100083642
375 Ga0068863_100117287
376 Ga0068858_100000567
377 Ga0068860_100032231
378 Ga0068860_100059687
379 Ga0068860_100073648
380 Ga0068860_100074883
381 Ga0068860_100075972
382 Ga0068862_100035723
383 Ga0068862_100057889
384 Ga0081539_10000022
385 Ga0081539_10000823
386 Ga0081539_10001922
387 Ga0070715_10000349
388 Ga0070716_100000475
389 Ga0097621_100010088
390 Ga0097621_100072777
391 Ga0068871_100002708
392 Ga0075430_100075898
393 Ga0075431_100206117
394 Ga0075433_10035096
395 Ga0075434_100098945
396 Ga0075434_100100132
397 Ga0075436_100000026
398 Ga0075436_100010235
399 Ga0097620_100026897
400 Ga0097620_100058308
401 Ga0097620_100064231
402 Ga0097620_100068720
403 Ga0097620_100077158
404 Ga0097620_100162177
405 Ga0075435_100005797
406 Ga0105251_10016483
407 Ga0111539_10013370
408 Ga0111539_10027786
409 Ga0111539_10030523
410 Ga0105247_10000252
411 Ga0114129_10021832
412 Ga0114129_10036160
413 Ga0114129_10065029
414 Ga0114129_10075192
415 Ga0114129_10080097
416 Ga0114129_10114396
417 Ga0114129_10253972
418 Ga0105243_10000169
419 Ga0105243_10027300
420 Ga0105243_10141786
421 Ga0105242_10000692
422 Ga0105242_10002242
423 Ga0105242_10022295
424 Ga0105248_10036793
425 Ga0105248_10056392
426 Ga0105248_10064587
427 Ga0105248_10205429
428 Ga0105237_10001054
429 Ga0105237_10046471
430 Ga0105237_10130542
431 Ga0105249_10000112
432 Ga0105249_10001548
433 Ga0105249_10018744
434 Ga0157373_10009412
435 Ga0157378_10008817
436 Ga0157378_10015672
437 Ga0157378_10043158
438 Ga0157378_10062908
439 Ga0163162_10000055
440 Ga0163162_10004344
441 Ga0163162_10010306
442 Ga0163162_10020673
443 Ga0163162_10032975
444 Ga0163162_10046964
445 Ga0163162_10228667
446 Ga0157375_10054164
447 Ga0157375_10061433
448 Ga0163163_10000334
449 Ga0163163_10003583
450 Ga0163163_10006539
451 Ga0163163_10071774
452 Ga0163163_10174441
453 Ga0157380_10001270
454 Ga0157380_10022679
455 Ga0157376_10028020
456 Ga0213876_10011673
457 Ga0207653_10000177
458 Ga0207653_10008606
459 Ga0207642_10008397
460 Ga0207710_10000001
461 Ga0207710_10001782
462 Ga0207647_10001341
463 Ga0207685_10000074
464 Ga0207684_10000472
465 Ga0207684_10003803
466 Ga0207684_10044088
467 Ga0207684_10060067
468 Ga0207684_10117487
469 Ga0207654_10082981
470 Ga0207707_10000022
471 Ga0207695_10169183
472 Ga0207671_10011510
473 Ga0207660_10002042
474 Ga0207652_10001380
475 Ga0207646_10012090
476 Ga0207646_10149347
477 Ga0207681_10015272
478 Ga0207650_10000332
479 Ga0207650_10014042
480 Ga0207644_10000322
481 Ga0207690_10036960
482 Ga0207690_10071393
483 Ga0207706_10067322
484 Ga0207706_10079422
485 Ga0207706_10110488
486 Ga0207686_10000082
487 Ga0207686_10000945
488 Ga0207709_10000219
489 Ga0207704_10044555
490 Ga0207665_10001291
491 Ga0207691_10017578
492 Ga0207711_10002023
493 Ga0207689_10008129
494 Ga0207689_10073578
495 Ga0207689_10126571
496 Ga0207651_10005409
497 Ga0207712_10000416
498 Ga0207668_10052127
499 Ga0207677_10079577
500 Ga0207703_10002183
501 Ga0207639_10048982
502 Ga0207708_10000092
503 Ga0207708_10011304
504 Ga0207708_10024645
505 Ga0207676_10003512
506 Ga0207676_10028053
507 Ga0207676_10046281
508 Ga0207676_10060217
509 Ga0207674_10076417
510 Ga0207674_10218396
511 Ga0207675_100001303
512 Ga0207675_100023712
513 Ga0207675_100025787
514 Ga0207675_100091633
515 Ga0207428_10018905
516 Ga0268264_10016643
517 Ga0268264_10018095
518 Ga0268264_10027184
519 Ga0268264_10070979
520 Ga0268264_10096362
521 Ga0307408_100017065
522 Ga0307405_10081344
523 Ga0307410_10110322
524 Ga0307412_10129933
525 Ga0307416_100116168
526 Ga0373951_0009592
527 Ga0373942_0014380
528 Ga0395900_0187847
529 Ga0395898_0172279
530 Ga0395898_0216530
531 Ga0395901_0029166
532 Ga0242422_00648
533 Ga0436365_0850853
534 Ga0439458_0003198
535 Ga0439434_0022330
536 Ga0495621_0008229
537 Ga0496106_0125745
538 Ga0496107_0133425
539 Ga0496112_0108983
540 Ga0501296_000713
541 Ga0501298_000848
542 Ga0501299_003246
543 Ga0501038_0004785
544 Ga0501072_0002999
545 Ga0501075_0152079
546 Ga0501223_005794
547 Ga0501223_006067
548 Ga0501235_003262
549 Ga0501240_000446
550 Ga0501229_001040
551 Ga0501226_000466
552 nmdc:mga05p37_100125_c1
553 nmdc:mga0qj67_99524_c1
554 nmdc:mga06r32_87942_c1
555 nmdc:mga08y16_5984_c1
556 nmdc:mga0n895_31785_c1
557 nmdc:mga0rr50_576_c1
558 nmdc:mga08x19_5268_c1
559 nmdc:mga08x19_923_c1
560 nmdc:mga0a205_145509_c1
561 nmdc:mga0a205_42987_c1
562 nmdc:mga0a205_66402_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

41

350

0.99

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

143

318

0.99

PF01842

ACT

ACT domain

494

558

0.97

PF19304

PGDH_inter

D-3-phosphoglycerate dehydrogenase intervening domain

361

483

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.8999 105 293
1wwk-assembly1.cif.gz_B crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3 0.8934 10 308
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.8863 105 293
1wwk-assembly1.cif.gz_B crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3 0.8822 10 308
6rj6-assembly1.cif.gz_A crystal structure of phgdh in complex with bi-4924 0.8764 104 306
ID Description Score Start End Superfamily
af_Q58424_451_524_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9885 464 536 3.30.70.260
af_A0A1D6DW07_553_626_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9839 464 536 3.30.70.260
af_Q2FXK1_457_530_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9702 464 536 3.30.70.260
af_Q58424_451_524_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9624 464 536 3.30.70.260
af_A0A1D6DW07_553_626_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9581 464 536 3.30.70.260
ID Description Score Start End GO Terms
AF-A0A2R6FPB6-F1-model_v4 Phosphoglycerate dehydrogenase 0.9751 447 536
AF-K7NN66-F1-model_v4 ACT domain-containing protein 0.9693 461 536
AF-A0A2E8HFK3-F1-model_v4 ACT domain-containing protein 0.9642 422 536
AF-A0A3T1E0P6-F1-model_v4 deleted 0.9567 145 270
AF-A0A800L718-F1-model_v4 Hydroxyacid dehydrogenase 0.9521 185 271 GO:0016614
GO:0051287

Map