F383379

General Info

Members Datasets Scaffolds Average Seq Length
279 205 558 880

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2523231044|2523388100
Length 978
Sequence DQVTEQDQRTKTADQDSTSTSTPQGPPTATTPDGHPSREPWDYPRHWIADVLASDGGVVHLRPIVPDDADRVVAFHGRLSERTRYMRYFGPTPTLPPREVARMTTVDYQKRVAIVAVLGGEIIAIGLYEGLGFDGKPESAEVAFVVADDHQGRGLGPILLEHLAGIAAENGFTRFEAEVLSENPNMVAVFRDAGYQLSRSFDGSTVHVEFLIDPTEALLSVRNARERASEARSVANLLRPTSVAVIGASTDPKKVGNALLANIIAGGFTGPVYPVNGPAHEVDGDELGDEGDDGAQPDHDAHHHGHGHGHGPGPQRRTTPAERRSHPRPPSVRGIRAYRTVRDIPDPVDLAVVAVPAEIVGAVLDDCLVKGVRTLVVVSSGFGESGEAGLESEHRLLEQVREHGMRLVGPNALGVANNDPTIALNATLAPRIPAEGRVGFFCQSGALGIAILDTAARRQIGLSTFVSAGNRADVSGNDLLQYWDTDTTTDVVLLYLESFGNPRKFSRIARRVSRSKPIVAVKSGKGAMTAARRARTSAASLDDQIAQMVLAQAGVIQVDTISELFDCATIFAHQPLPRGPRTRIIGNSSVLGSLAADTARGGGLEVTETIDLGAGATEDEFEAAVTEAMADPGVDAVLVVFVPPVAVDADWHARALMAAANSPTADGPKPIVTTFLAVEGIPPGLMKPGPNGMPVRGSIPSYGSPERAAIALTRAWQYARWCERPESEVHRPDGTDPEAARMFVREAMAGVGDGDGVHLGHVESATILGWYGIPVVPFREVTTMHEASAAARELGFPVAVKATSETWRGRLDREGARLDLPDATAVITAFTELGELTGDAVLHVQKMAPKGIGTVISVRDDPSFGSLISFGLSGRTFDLLGDRGYRAIPLSPLDAAELIDEPKSAPLLGGYAGEPPVDRDALTDLLLRISTLVEDIPEVREVVCDPILASPDGAGVLNAQIRLGPVPTRADTGPRRLG

Samples

Sample ID Description Type Environment
1 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
2 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
60 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
64 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
79 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
80 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
87 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
88 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
96 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
106 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
107 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
108 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
109 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
151 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
152 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
153 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
157 2508501039 Frankia saprophytica CN3 Isolate Nodule
158 2547132424 Nocardia nova SH22a Isolate Unclassified
159 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
160 2643221576 Nocardioides sp. Root614 Isolate Unclassified
161 2643221590 Nocardioides sp. Root682 Isolate Unclassified
162 2643221641 Nocardioides sp. Root122 Isolate Unclassified
163 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
164 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
165 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
166 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
167 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
168 2687453737 Frankia sp. BMG5.36 Isolate Nodule
169 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
170 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
171 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
172 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
173 2739367898 Nocardioides sp. CF479 Isolate Unclassified
174 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
175 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
176 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
177 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
178 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
179 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
180 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
181 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
182 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
183 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
184 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
185 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
186 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
187 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
188 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
189 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
190 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
191 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
192 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
193 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
194 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
195 2922554459 Rhodococcus sp. 66b Isolate Unclassified
196 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
197 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
198 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
199 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
200 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
201 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
202 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
203 8002775197 Frankia nepalensis CN7 Isolate Nodule
204 8002784119 Frankia sp. AgB1.9 Isolate Nodule
205 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.08
Metatranscriptomes 0
Isolates 17.92

Biome Distribution

Category Percentage (%)
Aerial Root 1.08
Bulb 0
Endosphere 3.94
Nodule 2.51
Rhizoplane 5.02
Rhizosphere 75.99
Stem 0
Stem Tuber 0
Unclassified 0.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070692_10006272 3300005345 Bacteria 5152
2 Ga0070659_100000031 3300005366 Bacteria 125048
3 Ga0070714_100000242 3300005435 Bacteria 42641
4 Ga0070714_100002773 3300005435 Bacteria 12909
5 Ga0070714_100058834 3300005435 Bacteria 3294
6 Ga0070710_10000005 3300005437 Bacteria 238049
7 Ga0070708_100039694 3300005445 Unclassified 4120
8 Ga0070706_100000342 3300005467 Bacteria 56147
9 Ga0070707_100001474 3300005468 Bacteria 23038
10 Ga0070707_100004707 3300005468 Bacteria 12778
11 Ga0070707_100010521 3300005468 Bacteria 8620
12 Ga0070707_100015834 3300005468 Bacteria 7080
13 Ga0070707_100063122 3300005468 Bacteria 3555
14 Ga0070698_100002342 3300005471 Bacteria 20944
15 Ga0070665_100003919 3300005548 Bacteria 15713
16 Ga0068859_100000011 3300005617 Bacteria 309687
17 Ga0068859_100043303 3300005617 Bacteria 4524
18 Ga0068860_100031946 3300005843 Bacteria 5061
19 Ga0081455_10000427 3300005937 Bacteria 55256
20 Ga0081455_10003100 3300005937 Bacteria 19344
21 Ga0081538_10000005 3300005981 Bacteria 187304
22 Ga0081538_10011383 3300005981 Bacteria 7208
23 Ga0070717_10000056 3300006028 Bacteria 96306
24 Ga0070717_10000301 3300006028 Bacteria 32522
25 Ga0075365_10001109 3300006038 Bacteria 11748
26 Ga0075363_100019525 3300006048 Bacteria 3389
27 Ga0075364_10002195 3300006051 Bacteria 10946
28 Ga0070715_10006323 3300006163 Bacteria 4020
29 Ga0070712_100000013 3300006175 Bacteria 109912
30 Ga0075367_10006772 3300006178 Bacteria 5819
31 Ga0075428_100011250 3300006844 Bacteria 9958
32 Ga0075430_100015884 3300006846 Bacteria 6412
33 Ga0075430_100060457 3300006846 Bacteria 3184
34 Ga0075431_100000141 3300006847 Bacteria 48843
35 Ga0075431_100007840 3300006847 Bacteria 10642
36 Ga0075431_100018023 3300006847 Bacteria 7182
37 Ga0075431_100068131 3300006847 Bacteria 3673
38 Ga0075431_100083369 3300006847 Bacteria 3300
39 Ga0075429_100020658 3300006880 Bacteria 5716
40 Ga0075429_100036371 3300006880 Bacteria 4282
41 Ga0075436_100002421 3300006914 Bacteria 12860
42 Ga0097620_100000011 3300006931 Bacteria 309687
43 Ga0097620_100043299 3300006931 Bacteria 4524
44 Ga0111539_10058346 3300009094 Unclassified 4579
45 Ga0111539_10073689 3300009094 Bacteria 4025
46 Ga0105247_10000288 3300009101 Bacteria 45854
47 Ga0105248_10000055 3300009177 Bacteria 141968
48 Ga0105239_10023578 3300010375 Bacteria 6777
49 Ga0157370_10021569 3300013104 Bacteria 6418
50 Ga0157372_10000132 3300013307 Bacteria 82054
51 Ga0157375_10028706 3300013308 Bacteria 5220
52 Ga0157375_10060204 3300013308 Bacteria 3765
53 Ga0163163_10037888 3300014325 Bacteria 4693
54 Ga0157380_10015406 3300014326 Bacteria 5619
55 Ga0163161_10024306 3300017792 Bacteria 4280
56 Ga0207692_10000003 3300025898 Bacteria 431531
57 Ga0207710_10000207 3300025900 Bacteria 54262
58 Ga0207684_10000012 3300025910 Bacteria 478666
59 Ga0207693_10000046 3300025915 Bacteria 100888
60 Ga0207646_10000063 3300025922 Bacteria 150574
61 Ga0207646_10004979 3300025922 Bacteria 14189
62 Ga0207646_10005810 3300025922 Bacteria 12916
63 Ga0207646_10042239 3300025922 Bacteria 4097
64 Ga0207664_10000105 3300025929 Bacteria 75519
65 Ga0207690_10000367 3300025932 Bacteria 29944
66 Ga0207691_10037778 3300025940 Bacteria 4470
67 Ga0207711_10000030 3300025941 Bacteria 206250
68 Ga0207675_100007938 3300026118 Bacteria 10009
69 Ga0268264_10000398 3300028381 Bacteria 62200
70 Ga0268264_10059260 3300028381 Bacteria 3208
71 Ga0265326_10000182 3300028558 Bacteria 31975
72 Ga0265319_1004355 3300028563 Bacteria 7025
73 Ga0265334_10000050 3300028573 Bacteria 88877
74 Ga0307517_10038520 3300028786 Bacteria 5287
75 Ga0265338_10004931 3300028800 Bacteria 17721
76 Ga0265324_10001417 3300029957 Bacteria 13780
77 Ga0265327_10012383 3300031251 Bacteria 5761
78 Ga0307509_10119835 3300031507 Bacteria 2612
79 Ga0316576_10017346 3300031727 Bacteria 4888
80 Ga0316578_10004761 3300031728 Bacteria 6466
81 Ga0307410_10013810 3300031852 Bacteria 4727
82 Ga0373926_0004194 3300035083 Bacteria 4704
83 Ga0373946_0000206 3300035171 Bacteria 18285
84 Ga0316574_0005615 3300035398 Bacteria 6706
85 Ga0373935_0000989 3300035692 Bacteria 15455
86 Ga0373927_0004103 3300035695 Bacteria 10263
87 Ga0316584_0012928 3300036712 Bacteria 5896
88 Ga0395900_0063173 3300037418 Bacteria 3806
89 Ga0395898_0010072 3300037466 Bacteria 9893
90 Ga0395901_0023359 3300038443 Bacteria 6337
91 Ga0451853_0493045 3300041512 Bacteria 8072
92 Ga0466964_0001012 3300044706 Bacteria 9334
93 Ga0466970_0008094 3300044765 Bacteria 5278
94 Ga0466957_0003888 3300044842 Bacteria 8252
95 Ga0466967_0039855 3300045976 Bacteria 4042
96 Ga0495592_0006938 3300046454 Bacteria 8461
97 Ga0495603_0003119 3300046455 Bacteria 9850
98 Ga0495641_0001726 3300046461 Bacteria 18231
99 Ga0495651_0004819 3300046462 Bacteria 10322
100 Ga0495653_0003077 3300046463 Bacteria 13375
101 Ga0495580_0001037 3300046472 Bacteria 24392
102 Ga0495582_0000105 3300046473 Bacteria 43680
103 Ga0495639_0000670 3300046475 Bacteria 15778
104 Ga0495662_0000435 3300046476 Bacteria 18745
105 Ga0495662_0004279 3300046476 Bacteria 7177
106 Ga0495608_0011375 3300046511 Bacteria 6193
107 Ga0495618_0002308 3300046514 Bacteria 12347
108 Ga0495618_0023248 3300046514 Bacteria 3832
109 Ga0495628_0002092 3300046516 Bacteria 18089
110 Ga0495628_0012229 3300046516 Bacteria 7235
111 Ga0495630_0038502 3300046517 Bacteria 3576
112 Ga0495666_0002768 3300046526 Bacteria 8758
113 Ga0495665_0002816 3300046531 Bacteria 9383
114 Ga0495640_0003292 3300046533 Bacteria 12994
115 Ga0495640_0037259 3300046533 Bacteria 3431
116 Ga0495586_0001077 3300046535 Bacteria 15418
117 Ga0495645_0004690 3300046543 Bacteria 9329
118 Ga0495667_0038728 3300046559 Bacteria 3173
119 Ga0495668_0000490 3300046616 Bacteria 49603
120 Ga0495634_0000938 3300046642 Bacteria 27627
121 Ga0495599_0000728 3300046678 Bacteria 18578
122 Ga0495599_0016131 3300046678 Bacteria 4636
123 Ga0495646_0002113 3300046680 Bacteria 12051
124 Ga0495646_0027655 3300046680 Bacteria 3556
125 Ga0495670_0010321 3300046691 Bacteria 4588
126 Ga0495600_0007545 3300046809 Bacteria 6659
127 Ga0495600_0025400 3300046809 Bacteria 3818
128 Ga0495604_0000799 3300047317 Bacteria 26476
129 Ga0495604_0033767 3300047317 Bacteria 4049
130 Ga0495674_0005336 3300047319 Bacteria 12328
131 Ga0495674_0056336 3300047319 Bacteria 3443
132 Ga0495672_0003585 3300047320 Bacteria 13196
133 Ga0495676_0000301 3300047321 Bacteria 40028
134 Ga0495680_0025909 3300047322 Bacteria 4846
135 Ga0495683_0000545 3300047323 Bacteria 28625
136 Ga0495687_014294 3300047443 Bacteria 4093
137 Ga0495675_0005989 3300047444 Bacteria 7435
138 Ga0495685_000430 3300047447 Bacteria 13188
139 Ga0495681_0010843 3300047470 Bacteria 5484
140 Ga0495684_0001774 3300047471 Bacteria 17304
141 Ga0495684_0035292 3300047471 Bacteria 3835
142 Ga0495593_0000346 3300047673 Bacteria 25656
143 Ga0496102_0011437 3300048905 Bacteria 7651
144 Ga0496104_0006241 3300048907 Bacteria 10471
145 Ga0496104_0011201 3300048907 Bacteria 8026
146 Ga0496104_0023817 3300048907 Bacteria 5630
147 Ga0496108_0005916 3300048911 Bacteria 9911
148 Ga0496110_0004417 3300048913 Bacteria 10891
149 Ga0496111_0000287 3300048914 Bacteria 24540
150 Ga0496112_0005307 3300048915 Bacteria 11120
151 Ga0496112_0048396 3300048915 Bacteria 4168
152 Ga0496113_0000411 3300048916 Bacteria 20739
153 Ga0496113_0000814 3300048916 Bacteria 16232
154 Ga0496114_0009757 3300048917 Bacteria 7628
155 Ga0496114_0030072 3300048917 Bacteria 4466
156 Ga0496114_0051707 3300048917 Bacteria 3421
157 Ga0501031_0003526 3300049568 Bacteria 10039
158 Ga0501031_0004760 3300049568 Bacteria 8816
159 Ga0501031_0013980 3300049568 Bacteria 5227
160 Ga0501033_0009929 3300049570 Bacteria 7308
161 Ga0501034_0010711 3300049571 Bacteria 9525
162 Ga0501034_0051742 3300049571 Bacteria 4141
163 Ga0501036_0004164 3300049572 Bacteria 11645
164 Ga0501036_0016520 3300049572 Bacteria 6165
165 Ga0501037_0001153 3300049573 Bacteria 19538
166 Ga0501037_0003534 3300049573 Bacteria 11347
167 Ga0501037_0004061 3300049573 Bacteria 10615
168 Ga0501037_0014536 3300049573 Bacteria 5791
169 Ga0501038_0006206 3300049574 Bacteria 11056
170 Ga0501038_0017169 3300049574 Bacteria 6543
171 Ga0501039_0006670 3300049575 Bacteria 8773
172 Ga0501039_0007766 3300049575 Bacteria 8182
173 Ga0501039_0012916 3300049575 Bacteria 6385
174 Ga0501039_0035087 3300049575 Bacteria 3871
175 Ga0501040_0013547 3300049576 Bacteria 5362
176 Ga0501040_0020764 3300049576 Bacteria 4379
177 Ga0501042_0008313 3300049578 Bacteria 6843
178 Ga0501042_0009375 3300049578 Bacteria 6522
179 Ga0501043_0014938 3300049579 Bacteria 6080
180 Ga0501046_0001131 3300049580 Bacteria 26046
181 Ga0501046_0003135 3300049580 Bacteria 15269
182 Ga0501047_0008484 3300049581 Bacteria 9693
183 Ga0501048_0003749 3300049582 Bacteria 11595
184 Ga0501048_0004795 3300049582 Bacteria 10306
185 Ga0501048_0009235 3300049582 Bacteria 7409
186 Ga0501048_0029569 3300049582 Bacteria 3972
187 Ga0501048_0029839 3300049582 Bacteria 3949
188 Ga0501067_0014214 3300049583 Bacteria 4409
189 Ga0501067_0023417 3300049583 Bacteria 3422
190 Ga0501068_0002032 3300049584 Bacteria 10779
191 Ga0501068_0013704 3300049584 Bacteria 4617
192 Ga0501070_0007871 3300049586 Bacteria 9031
193 Ga0501070_0011138 3300049586 Bacteria 7590
194 Ga0501070_0024724 3300049586 Bacteria 5038
195 Ga0501072_0012041 3300049588 Bacteria 6608
196 Ga0501073_0005335 3300049589 Bacteria 9639
197 Ga0501074_0004756 3300049590 Bacteria 9730
198 Ga0501074_0052734 3300049590 Bacteria 2935
199 Ga0501076_0003329 3300049592 Bacteria 11274
200 Ga0501076_0005141 3300049592 Bacteria 9362
201 Ga0501076_0027211 3300049592 Bacteria 4436
202 Ga0501076_0041394 3300049592 Bacteria 3625
203 Ga0501079_0006585 3300049741 Bacteria 8738
204 Ga0501079_0034339 3300049741 Bacteria 3903
205 Ga0501035_0001864 3300049822 Bacteria 21244
206 Ga0501044_0003292 3300049823 Bacteria 18191
207 Ga0501044_0047837 3300049823 Bacteria 4423
208 Ga0501045_0015813 3300049824 Bacteria 5352
209 Ga0501045_0022150 3300049824 Bacteria 4546
210 nmdc:mga00v17_13707_c1 3300050491 Bacteria 4506
211 nmdc:mga00v17_1404_c1 3300050491 Bacteria 12625
212 nmdc:mga04h51_7888_c1 3300050495 Bacteria 2830
213 nmdc:mga05p37_399_c1 3300050507 Bacteria 47170
214 nmdc:mga09592_1879_c1 3300050508 Bacteria 16896
215 nmdc:mga06r32_12565_c1 3300050510 Bacteria 7646
216 nmdc:mga06r32_2301_c1 3300050510 Bacteria 17088
217 nmdc:mga06r32_350_c1 3300050510 Bacteria 38442
218 Ga0495601_0021418 3300053077 Bacteria 3959
219 Ga0495612_0000332 3300053078 Bacteria 19042
220 Ga0495619_0005419 3300053085 Bacteria 8082
221 Ga0495619_0012734 3300053085 Bacteria 5293
222 Ga0500644_0000014 3300053088 Bacteria 109650
223 Ga0500556_0001323 3300053104 Bacteria 11025
224 Ga0500593_000511 3300053117 Bacteria 15228
225 Ga0500634_0002720 3300053161 Bacteria 7572
226 Ga0501084_0013917 3300054114 Bacteria 6661
227 Ga0501084_0017575 3300054114 Bacteria 5948
228 Ga0501084_0039966 3300054114 Bacteria 3924
229 Ga0530510_0043548 3300061734 Bacteria 3242
230 2523388100 2523231044 Bacteria 6434991
231 2508673289 2508501039 Bacteria 9978592
232 2548697598 2547132424 Bacteria 8348532
233 2566995183 2565956761 Bacteria 6601618
234 2643891325 2643221576 Bacteria 5214352
235 2643960373 2643221590 Bacteria 5214697
236 2644230282 2643221641 Bacteria 4490190
237 2644457350 2643221681 Bacteria 3707866
238 2644537751 2643221697 Bacteria 3575694
239 2645719401 2643221961 Bacteria 3919167
240 2645726312 2643221962 Bacteria 3874254
241 2676201929 2675902999 Bacteria 9438463
242 2689958624 2687453737 Bacteria 11203906
243 2738891439 2738541308 Bacteria 7020677
244 2739205538 2738543005 Bacteria 5278128
245 2739237116 2738543011 Bacteria 5731169
246 2739362007 2738543034 Bacteria 6084756
247 2740169047 2739367898 Bacteria 4367674
248 2744957159 2744054611 Bacteria 5611514
249 2753035100 2751185725 Bacteria 5740550
250 2753323617 2751185792 Bacteria 5739090
251 2774393259 2773857762 Bacteria 5971770
252 2774846505 2773857921 Bacteria 9435764
253 2809197097 2808606439 Bacteria 5952208
254 2812350773 2811994878 Bacteria 5992952
255 2835188961 2835188231 Bacteria 3476928
256 2857484283 2857481737 Bacteria 4761446
257 2868093327 2868088558 Bacteria 7609351
258 2884699502 2884693830 Bacteria 11273186
259 2889301341 2889300758 Bacteria 5690814
260 2891971640 2891968417 Bacteria 5821697
261 2895443287 2895442618 Bacteria 11027144
262 2904539215 2904535858 Bacteria 6308016
263 2904769918 2904765812 Bacteria 5369154
264 2904771232 2904770941 Bacteria 5580202
265 2908816042 2908811453 Bacteria 5478616
266 2919423273 2919420072 Bacteria 5390363
267 2919435881 2919432681 Bacteria 5390474
268 2919719523 2919713450 Bacteria 7431245
269 2922556667 2922554459 Bacteria 6683962
270 2928144751 2928142448 Bacteria 5288925
271 2932398988 2932398195 Bacteria 3847976
272 2939744809 2939743619 Bacteria 5762299
273 2984579910 2984576629 Bacteria 4248407
274 2984594926 2984592036 Bacteria 3670284
275 2990260411 2990256926 Bacteria 4252839
276 2995465204 2995463766 Bacteria 8577691
277 8002776826 8002775197 Bacteria 10728764
278 8002788941 8002784119 Bacteria 9788632
279 8054611125 8054609563 Bacteria 5170090
280 Ga0070692_10006272
281 Ga0070659_100000031
282 Ga0070714_100000242
283 Ga0070714_100002773
284 Ga0070714_100058834
285 Ga0070710_10000005
286 Ga0070708_100039694
287 Ga0070706_100000342
288 Ga0070707_100001474
289 Ga0070707_100004707
290 Ga0070707_100010521
291 Ga0070707_100015834
292 Ga0070707_100063122
293 Ga0070698_100002342
294 Ga0070665_100003919
295 Ga0068859_100000011
296 Ga0068859_100043303
297 Ga0068860_100031946
298 Ga0081455_10000427
299 Ga0081455_10003100
300 Ga0081538_10000005
301 Ga0081538_10011383
302 Ga0070717_10000056
303 Ga0070717_10000301
304 Ga0075365_10001109
305 Ga0075363_100019525
306 Ga0075364_10002195
307 Ga0070715_10006323
308 Ga0070712_100000013
309 Ga0075367_10006772
310 Ga0075428_100011250
311 Ga0075430_100015884
312 Ga0075430_100060457
313 Ga0075431_100000141
314 Ga0075431_100007840
315 Ga0075431_100018023
316 Ga0075431_100068131
317 Ga0075431_100083369
318 Ga0075429_100020658
319 Ga0075429_100036371
320 Ga0075436_100002421
321 Ga0097620_100000011
322 Ga0097620_100043299
323 Ga0111539_10058346
324 Ga0111539_10073689
325 Ga0105247_10000288
326 Ga0105248_10000055
327 Ga0105239_10023578
328 Ga0157370_10021569
329 Ga0157372_10000132
330 Ga0157375_10028706
331 Ga0157375_10060204
332 Ga0163163_10037888
333 Ga0157380_10015406
334 Ga0163161_10024306
335 Ga0207692_10000003
336 Ga0207710_10000207
337 Ga0207684_10000012
338 Ga0207693_10000046
339 Ga0207646_10000063
340 Ga0207646_10004979
341 Ga0207646_10005810
342 Ga0207646_10042239
343 Ga0207664_10000105
344 Ga0207690_10000367
345 Ga0207691_10037778
346 Ga0207711_10000030
347 Ga0207675_100007938
348 Ga0268264_10000398
349 Ga0268264_10059260
350 Ga0265326_10000182
351 Ga0265319_1004355
352 Ga0265334_10000050
353 Ga0307517_10038520
354 Ga0265338_10004931
355 Ga0265324_10001417
356 Ga0265327_10012383
357 Ga0307509_10119835
358 Ga0316576_10017346
359 Ga0316578_10004761
360 Ga0307410_10013810
361 Ga0373926_0004194
362 Ga0373946_0000206
363 Ga0316574_0005615
364 Ga0373935_0000989
365 Ga0373927_0004103
366 Ga0316584_0012928
367 Ga0395900_0063173
368 Ga0395898_0010072
369 Ga0395901_0023359
370 Ga0451853_0493045
371 Ga0466964_0001012
372 Ga0466970_0008094
373 Ga0466957_0003888
374 Ga0466967_0039855
375 Ga0495592_0006938
376 Ga0495603_0003119
377 Ga0495641_0001726
378 Ga0495651_0004819
379 Ga0495653_0003077
380 Ga0495580_0001037
381 Ga0495582_0000105
382 Ga0495639_0000670
383 Ga0495662_0000435
384 Ga0495662_0004279
385 Ga0495608_0011375
386 Ga0495618_0002308
387 Ga0495618_0023248
388 Ga0495628_0002092
389 Ga0495628_0012229
390 Ga0495630_0038502
391 Ga0495666_0002768
392 Ga0495665_0002816
393 Ga0495640_0003292
394 Ga0495640_0037259
395 Ga0495586_0001077
396 Ga0495645_0004690
397 Ga0495667_0038728
398 Ga0495668_0000490
399 Ga0495634_0000938
400 Ga0495599_0000728
401 Ga0495599_0016131
402 Ga0495646_0002113
403 Ga0495646_0027655
404 Ga0495670_0010321
405 Ga0495600_0007545
406 Ga0495600_0025400
407 Ga0495604_0000799
408 Ga0495604_0033767
409 Ga0495674_0005336
410 Ga0495674_0056336
411 Ga0495672_0003585
412 Ga0495676_0000301
413 Ga0495680_0025909
414 Ga0495683_0000545
415 Ga0495687_014294
416 Ga0495675_0005989
417 Ga0495685_000430
418 Ga0495681_0010843
419 Ga0495684_0001774
420 Ga0495684_0035292
421 Ga0495593_0000346
422 Ga0496102_0011437
423 Ga0496104_0006241
424 Ga0496104_0011201
425 Ga0496104_0023817
426 Ga0496108_0005916
427 Ga0496110_0004417
428 Ga0496111_0000287
429 Ga0496112_0005307
430 Ga0496112_0048396
431 Ga0496113_0000411
432 Ga0496113_0000814
433 Ga0496114_0009757
434 Ga0496114_0030072
435 Ga0496114_0051707
436 Ga0501031_0003526
437 Ga0501031_0004760
438 Ga0501031_0013980
439 Ga0501033_0009929
440 Ga0501034_0010711
441 Ga0501034_0051742
442 Ga0501036_0004164
443 Ga0501036_0016520
444 Ga0501037_0001153
445 Ga0501037_0003534
446 Ga0501037_0004061
447 Ga0501037_0014536
448 Ga0501038_0006206
449 Ga0501038_0017169
450 Ga0501039_0006670
451 Ga0501039_0007766
452 Ga0501039_0012916
453 Ga0501039_0035087
454 Ga0501040_0013547
455 Ga0501040_0020764
456 Ga0501042_0008313
457 Ga0501042_0009375
458 Ga0501043_0014938
459 Ga0501046_0001131
460 Ga0501046_0003135
461 Ga0501047_0008484
462 Ga0501048_0003749
463 Ga0501048_0004795
464 Ga0501048_0009235
465 Ga0501048_0029569
466 Ga0501048_0029839
467 Ga0501067_0014214
468 Ga0501067_0023417
469 Ga0501068_0002032
470 Ga0501068_0013704
471 Ga0501070_0007871
472 Ga0501070_0011138
473 Ga0501070_0024724
474 Ga0501072_0012041
475 Ga0501073_0005335
476 Ga0501074_0004756
477 Ga0501074_0052734
478 Ga0501076_0003329
479 Ga0501076_0005141
480 Ga0501076_0027211
481 Ga0501076_0041394
482 Ga0501079_0006585
483 Ga0501079_0034339
484 Ga0501035_0001864
485 Ga0501044_0003292
486 Ga0501044_0047837
487 Ga0501045_0015813
488 Ga0501045_0022150
489 nmdc:mga00v17_13707_c1
490 nmdc:mga00v17_1404_c1
491 nmdc:mga04h51_7888_c1
492 nmdc:mga05p37_399_c1
493 nmdc:mga09592_1879_c1
494 nmdc:mga06r32_12565_c1
495 nmdc:mga06r32_2301_c1
496 nmdc:mga06r32_350_c1
497 Ga0495601_0021418
498 Ga0495612_0000332
499 Ga0495619_0005419
500 Ga0495619_0012734
501 Ga0500644_0000014
502 Ga0500556_0001323
503 Ga0500593_000511
504 Ga0500634_0002720
505 Ga0501084_0013917
506 Ga0501084_0017575
507 Ga0501084_0039966
508 Ga0530510_0043548
509 2523388100
510 2508673289
511 2548697598
512 2566995183
513 2643891325
514 2643960373
515 2644230282
516 2644457350
517 2644537751
518 2645719401
519 2645726312
520 2676201929
521 2689958624
522 2738891439
523 2739205538
524 2739237116
525 2739362007
526 2740169047
527 2744957159
528 2753035100
529 2753323617
530 2774393259
531 2774846505
532 2809197097
533 2812350773
534 2835188961
535 2857484283
536 2868093327
537 2884699502
538 2889301341
539 2891971640
540 2895443287
541 2904539215
542 2904769918
543 2904771232
544 2908816042
545 2919423273
546 2919435881
547 2919719523
548 2922556667
549 2928144751
550 2932398988
551 2939744809
552 2984579910
553 2984594926
554 2990260411
555 2995465204
556 8002776826
557 8002788941
558 8054611125

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13549

ATP-grasp_5

ATP-grasp domain

752

963

0.97

PF13380

CoA_binding_2

CoA binding domain

325

418

0.96

PF13607

Succ_CoA_lig

Succinyl-CoA ligase like flavodoxin domain

435

571

0.96

PF13380

CoA_binding_2

CoA binding domain

241

299

0.89

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

81

195

0.83

PF13302

Acetyltransf_3

Acetyltransferase (GNAT) domain

59

196

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yaj-assembly1.cif.gz_C ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 (apo form) 0.9403 203 657
8iup-assembly1.cif.gz_A error: 404 client error: for url: https://data.rcsb.org/rest/v1/core/entry/8iup 0.9389 204 908
4xym-assembly1.cif.gz_B ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 in complex with coenzyme a, ca-ampcp and hgcl+ 0.9374 698 908
2csu-assembly1.cif.gz_A crystal structure of ph0766 from pyrococcus horikoshii ot3 0.9363 203 659
8iup-assembly1.cif.gz_B error: 404 client error: for url: https://data.rcsb.org/rest/v1/core/entry/8iup 0.9336 202 908
ID Description Score Start End Superfamily
af_Q8IL89_166_326_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.979 331 489 3.40.50.261
4xymA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9735 209 330 3.40.50.720
af_Q58010_137_292_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.9713 343 495 3.40.50.261
af_P76594_126_282_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.9684 332 494 3.40.50.261
af_Q8IL89_36_165_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9674 203 330 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7J4P0J4-F1-model_v4 CoA-binding protein 0.9904 203 337
AF-A0A0F8XS85-F1-model_v4 CoA-binding domain-containing protein 0.9901 203 526
AF-A0A6B3ETD3-F1-model_v4 Acyl-CoA synthetase 0.9876 258 432
AF-A0A3M1HXW1-F1-model_v4 CoA-binding domain-containing protein 0.9839 210 330
AF-A0A7J3MLL7-F1-model_v4 CoA-binding protein 0.9814 203 601 GO:0043758

Map