F382329

General Info

Members Datasets Scaffolds Average Seq Length
278 211 556 378

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100124149|Ga0075430_1001241492
Length 398
Sequence MQARNREAMGLQTGTVLATSDEERAIRDAVGGIAGSFGPDYYQQQVDDGGNCAELWNALGAKGYLGVHLPERYGGGGLGLRELAIVVQESAIAGCPMQSMLFSPGVVGTILERSSNEEQKERWLPGVARGDTRLSFAITEPDAGSNAHRISTMAKRDGDHYVINGQKVFITGMESADWLMFVARTGVDEVGGRGRLSVFMVKSDAPGVSWTPIRTVMNQPDKSHQVFFDNVEVHAGDLIGQEGKGLRVAFTGLNTERILTSSLCTGIGQYALDKAIAYVNERHVWGQPIGAHQAVAHPLAAAHIHLQAAQLVTDRACELYDTGAEVGELANMAKYLGAAAGLEALDSAVAVHGGNGVTYEYQLATYFWVVRMLNMGPVSKEMILNFVAEHSLGLPRSY

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
14 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
25 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
27 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
28 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
29 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
38 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
39 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
40 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
41 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
44 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
45 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
46 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
47 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
53 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
54 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
55 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
56 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
57 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
58 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
59 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
60 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
61 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
62 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
66 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
67 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
68 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
75 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
78 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
83 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
96 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
99 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
100 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
101 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
102 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
103 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
110 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
111 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
112 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
149 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
150 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
151 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
152 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
153 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
154 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
155 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
156 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
161 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
162 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
163 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
164 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
165 2643221548 Streptomyces sp. Root55 Isolate Unclassified
166 2643221647 Streptomyces sp. Root369 Isolate Unclassified
167 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
168 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
169 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
170 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
171 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
172 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
173 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
174 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
175 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
176 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
177 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
178 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
179 2808606448 Streptomyces sp. 193411 Isolate Unclassified
180 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
181 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
182 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
183 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
184 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
185 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
186 2867369537 Streptomyces sp. Z26 Isolate Unclassified
187 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
188 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
189 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
190 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
191 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
192 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
193 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
194 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
195 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
196 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
197 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
198 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
199 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
200 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
201 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
202 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
203 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
204 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
205 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
206 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
207 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
208 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
209 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
210 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
211 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.58
Metatranscriptomes 0.36
Isolates 19.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.91
Nodule 0
Rhizoplane 6.47
Rhizosphere 63.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100124149 3300006846 Bacteria 2152
2 JGI24738J21930_10015640 3300002075 Bacteria 1611
3 JGI24751J29686_10000292 3300002459 Bacteria 19047
4 rootL2_10125148 3300003322 Bacteria 3086
5 Ga0070682_100057241 3300005337 Bacteria 2455
6 Ga0070660_100015123 3300005339 Bacteria 5568
7 Ga0070714_100471676 3300005435 Bacteria 1194
8 Ga0068859_100097054 3300005617 Bacteria 3000
9 Ga0068860_100000902 3300005843 Bacteria 32958
10 Ga0081455_10050488 3300005937 Bacteria 3577
11 Ga0075364_10012069 3300006051 Bacteria 5271
12 Ga0075367_10044497 3300006178 Bacteria 2603
13 Ga0075369_10001216 3300006186 Bacteria 8728
14 Ga0097620_100097052 3300006931 Bacteria 3000
15 Ga0105250_10026287 3300009092 Bacteria 2344
16 Ga0105245_10123172 3300009098 Bacteria 2424
17 Ga0105245_10133441 3300009098 Bacteria 2331
18 Ga0105243_10080118 3300009148 Bacteria 2662
19 Ga0105248_10023275 3300009177 Bacteria 6879
20 Ga0105237_10004087 3300009545 Bacteria 17020
21 Ga0105239_10003301 3300010375 Bacteria 19871
22 Ga0105246_10000251 3300011119 Bacteria 27640
23 Ga0157372_10046047 3300013307 Bacteria 4841
24 Ga0157375_10064196 3300013308 Bacteria 3655
25 Ga0182007_10000488 3300015262 Bacteria 23798
26 Ga0206352_10863079 3300020078 Bacteria 1421
27 Ga0213875_10079169 3300021388 Bacteria 1533
28 Ga0209758_1012527 3300025297 Bacteria 4733
29 Ga0207426_1004467 3300025302 Bacteria 6809
30 Ga0207426_1018506 3300025302 Bacteria 2453
31 Ga0209051_1011661 3300025303 Bacteria 4318
32 Ga0207696_1027531 3300025711 Bacteria 1751
33 Ga0207705_10034723 3300025909 Bacteria 3607
34 Ga0207671_10016328 3300025914 Bacteria 5774
35 Ga0207657_10019426 3300025919 Bacteria 6452
36 Ga0207664_10043877 3300025929 Bacteria 3500
37 Ga0207683_10228912 3300026121 Bacteria 1695
38 Ga0207683_10252489 3300026121 Bacteria 1610
39 Ga0209371_1009127 3300027312 Bacteria 3189
40 Ga0307517_10033125 3300028786 Bacteria 5948
41 Ga0307517_10036318 3300028786 Bacteria 5545
42 Ga0307515_10000933 3300028794 Bacteria 67151
43 Ga0307511_10002973 3300030521 Bacteria 17554
44 Ga0307511_10030780 3300030521 Bacteria 4814
45 Ga0307512_10005910 3300030522 Bacteria 12577
46 Ga0265327_10000004 3300031251 Bacteria 803973
47 Ga0307513_10004004 3300031456 Bacteria 19775
48 Ga0307509_10021597 3300031507 Bacteria 7273
49 Ga0307509_10025981 3300031507 Bacteria 6536
50 Ga0307508_10039453 3300031616 Bacteria 4242
51 Ga0307508_10060340 3300031616 Bacteria 3353
52 Ga0307508_10075635 3300031616 Bacteria 2944
53 Ga0307514_10007783 3300031649 Bacteria 9208
54 Ga0307514_10030561 3300031649 Bacteria 4324
55 Ga0307514_10054954 3300031649 Bacteria 3063
56 Ga0307516_10007420 3300031730 Bacteria 12610
57 Ga0307516_10009305 3300031730 Bacteria 10978
58 Ga0307518_10057659 3300031838 Bacteria 2821
59 Ga0307518_10115264 3300031838 Bacteria 1909
60 Ga0307410_10032331 3300031852 Bacteria 3365
61 Ga0307406_10046586 3300031901 Bacteria 2728
62 Ga0307412_10016629 3300031911 Bacteria 4388
63 Ga0307416_100020501 3300032002 Bacteria 4720
64 Ga0307416_100167425 3300032002 Bacteria 2041
65 Ga0307507_10005078 3300033179 Bacteria 22158
66 Ga0307507_10020011 3300033179 Bacteria 7510
67 Ga0307507_10050422 3300033179 Bacteria 4018
68 Ga0307510_10004385 3300033180 Bacteria 16592
69 Ga0307510_10028901 3300033180 Bacteria 6321
70 Ga0307510_10028947 3300033180 Bacteria 6315
71 Ga0307510_10055644 3300033180 Bacteria 4130
72 Ga0307510_10073695 3300033180 Bacteria 3380
73 Ga0436364_0164876 3300037853 Bacteria 3132
74 Ga0451787_435500 3300041441 Bacteria 1907
75 Ga0451793_0060685 3300041452 Bacteria 8241
76 Ga0451837_0068282 3300041494 Bacteria 2148
77 Ga0451839_0993736 3300041496 Bacteria 2335
78 Ga0451853_0233058 3300041512 Bacteria 3374
79 Ga0451853_2091219 3300041512 Bacteria 2855
80 Ga0439455_0001475 3300042012 Bacteria 3949
81 Ga0450903_000074 3300042138 Bacteria 20108
82 Ga0439458_0000916 3300042157 Bacteria 7601
83 Ga0466963_0011873 3300044694 Bacteria 5317
84 Ga0466970_0001072 3300044765 Bacteria 13252
85 Ga0495627_012170 3300046453 Bacteria 3063
86 Ga0495592_0000781 3300046454 Bacteria 22116
87 Ga0495603_0001872 3300046455 Bacteria 12400
88 Ga0495603_0002370 3300046455 Bacteria 11066
89 Ga0495590_0026608 3300046457 Bacteria 2031
90 Ga0495629_0000980 3300046459 Bacteria 22904
91 Ga0495629_0004080 3300046459 Bacteria 10963
92 Ga0495629_0004831 3300046459 Bacteria 10106
93 Ga0495629_0249134 3300046459 Bacteria 1222
94 Ga0495638_0036958 3300046460 Bacteria 3108
95 Ga0495651_0054482 3300046462 Bacteria 3075
96 Ga0495651_0063243 3300046462 Bacteria 2829
97 Ga0495662_0001878 3300046476 Bacteria 10525
98 Ga0495664_0001126 3300046477 Bacteria 13862
99 Ga0495664_0171962 3300046477 Bacteria 1314
100 Ga0495594_0006786 3300046499 Bacteria 5886
101 Ga0495594_0011925 3300046499 Bacteria 4521
102 Ga0495594_0040457 3300046499 Bacteria 2551
103 Ga0495594_0092614 3300046499 Bacteria 1694
104 Ga0495607_0054193 3300046501 Bacteria 2311
105 Ga0495608_0041246 3300046511 Bacteria 3090
106 Ga0495610_0126255 3300046512 Bacteria 1115
107 Ga0495616_0013581 3300046513 Bacteria 4588
108 Ga0495618_0013428 3300046514 Bacteria 4983
109 Ga0495620_0004136 3300046515 Bacteria 8234
110 Ga0495630_0011381 3300046517 Bacteria 6443
111 Ga0495631_0006948 3300046518 Bacteria 5797
112 Ga0495631_0104290 3300046518 Bacteria 1220
113 Ga0495632_0101495 3300046519 Bacteria 1356
114 Ga0495652_0015334 3300046529 Bacteria 6860
115 Ga0495652_0070741 3300046529 Bacteria 2915
116 Ga0495640_0018099 3300046533 Bacteria 5234
117 Ga0495640_0033200 3300046533 Bacteria 3669
118 Ga0495587_0019257 3300046536 Bacteria 4226
119 Ga0495609_0012916 3300046538 Bacteria 3953
120 Ga0495645_0112093 3300046543 Bacteria 1929
121 Ga0495622_0004197 3300046557 Bacteria 6716
122 Ga0495622_0019938 3300046557 Bacteria 3121
123 Ga0495622_0023553 3300046557 Bacteria 2872
124 Ga0495622_0067029 3300046557 Bacteria 1658
125 Ga0495634_0004167 3300046642 Bacteria 11416
126 Ga0495611_0025742 3300046648 Bacteria 2566
127 Ga0495635_0008133 3300046663 Bacteria 7329
128 Ga0495635_0042520 3300046663 Bacteria 3137
129 Ga0495588_0001876 3300046674 Bacteria 8955
130 Ga0495657_0003014 3300046675 Bacteria 13926
131 Ga0495657_0032043 3300046675 Bacteria 3671
132 Ga0495657_0032879 3300046675 Bacteria 3615
133 Ga0495599_0103919 3300046678 Bacteria 1770
134 Ga0495646_0000479 3300046680 Bacteria 21264
135 Ga0495646_0125617 3300046680 Bacteria 1448
136 Ga0495613_0001734 3300046689 Bacteria 16583
137 Ga0495613_0002401 3300046689 Bacteria 14166
138 Ga0495613_0013676 3300046689 Bacteria 6021
139 Ga0495613_0108656 3300046689 Bacteria 2000
140 Ga0495613_0141824 3300046689 Bacteria 1716
141 Ga0495670_0060775 3300046691 Bacteria 1899
142 Ga0495671_0008906 3300046692 Bacteria 5636
143 Ga0495649_0055143 3300046694 Bacteria 2148
144 Ga0495589_0014992 3300046794 Bacteria 3988
145 Ga0495589_0037209 3300046794 Bacteria 2438
146 Ga0495581_0070437 3300047315 Bacteria 2023
147 Ga0495604_0001421 3300047317 Bacteria 19651
148 Ga0495604_0023434 3300047317 Bacteria 4924
149 Ga0495674_0206088 3300047319 Bacteria 1630
150 Ga0495676_0001080 3300047321 Bacteria 23085
151 Ga0495676_0001331 3300047321 Bacteria 21198
152 Ga0495676_0087980 3300047321 Bacteria 2332
153 Ga0495676_0181751 3300047321 Bacteria 1473
154 Ga0495687_000974 3300047443 Bacteria 29055
155 Ga0495687_014531 3300047443 Bacteria 4047
156 Ga0495685_001536 3300047447 Bacteria 7085
157 Ga0495685_007127 3300047447 Bacteria 3684
158 Ga0495685_009616 3300047447 Bacteria 3234
159 Ga0495681_0003199 3300047470 Bacteria 11430
160 Ga0495684_0094401 3300047471 Bacteria 2265
161 Ga0495593_0014717 3300047673 Bacteria 4446
162 Ga0495602_0080556 3300048088 Bacteria 2742
163 Ga0495614_0003335 3300048089 Bacteria 7180
164 Ga0495614_0023652 3300048089 Bacteria 2652
165 Ga0496100_0031474 3300048903 Bacteria 3299
166 Ga0496101_0020460 3300048904 Bacteria 4531
167 Ga0496102_0004816 3300048905 Bacteria 11411
168 Ga0496104_0004287 3300048907 Bacteria 12403
169 Ga0496105_0036664 3300048908 Bacteria 4040
170 Ga0496106_0000408 3300048909 Bacteria 30485
171 Ga0496107_0001823 3300048910 Bacteria 13437
172 Ga0496108_0006223 3300048911 Bacteria 9663
173 Ga0496109_0049681 3300048912 Bacteria 3819
174 Ga0496110_0189349 3300048913 Bacteria 1868
175 Ga0496111_0000328 3300048914 Bacteria 23607
176 Ga0496114_0091444 3300048917 Bacteria 2584
177 Ga0496114_0124890 3300048917 Bacteria 2217
178 Ga0496114_0142393 3300048917 Bacteria 2077
179 Ga0496114_0168312 3300048917 Bacteria 1909
180 Ga0496114_0250849 3300048917 Bacteria 1557
181 Ga0496121_0008908 3300048924 Bacteria 11651
182 Ga0496121_0239865 3300048924 Bacteria 1264
183 Ga0496125_0072028 3300048928 Plasmid 2696
184 Ga0496126_0017139 3300048929 Bacteria 7224
185 Ga0496126_0080853 3300048929 Bacteria 2874
186 Ga0501032_0010941 3300049569 Bacteria 6524
187 Ga0501032_0049146 3300049569 Bacteria 2847
188 Ga0501033_0019674 3300049570 Bacteria 5102
189 Ga0501034_0015114 3300049571 Bacteria 7934
190 Ga0501036_0042036 3300049572 Bacteria 3869
191 Ga0501037_0008281 3300049573 Bacteria 7622
192 Ga0501039_0004522 3300049575 Bacteria 10503
193 Ga0501039_0209914 3300049575 Bacteria 1531
194 Ga0501041_0050758 3300049577 Bacteria 2528
195 Ga0501042_0027724 3300049578 Bacteria 3984
196 Ga0501043_0018856 3300049579 Bacteria 5415
197 Ga0501043_0240606 3300049579 Bacteria 1396
198 Ga0501046_0013766 3300049580 Bacteria 6839
199 Ga0501047_0004991 3300049581 Bacteria 12455
200 Ga0501047_0014290 3300049581 Bacteria 7549
201 Ga0501048_0009946 3300049582 Bacteria 7122
202 Ga0501069_0027107 3300049585 Bacteria 3140
203 Ga0501035_0008849 3300049822 Bacteria 9367
204 Ga0501044_0000276 3300049823 Bacteria 65263
205 Ga0501044_0176957 3300049823 Bacteria 2102
206 Ga0501044_0218802 3300049823 Bacteria 1856
207 Ga0501044_0255849 3300049823 Bacteria 1690
208 Ga0501045_0154946 3300049824 Bacteria 1705
209 nmdc:mga00v17_20515_c1 3300050491 Bacteria 3787
210 nmdc:mga06z11_21616_c1 3300050494 Bacteria 2992
211 nmdc:mga0sz30_6568_c1 3300050516 Bacteria 4325
212 Ga0495619_0045447 3300053085 Bacteria 2885
213 Ga0500644_0006493 3300053088 Bacteria 3001
214 Ga0500566_0032885 3300053094 Bacteria 3023
215 Ga0500654_078522 3300053099 Bacteria 1556
216 Ga0500553_020974 3300053101 Bacteria 3308
217 Ga0500569_031683 3300053109 Bacteria 1489
218 Ga0500628_009012 3300053129 Bacteria 1748
219 Ga0500652_009318 3300053131 Bacteria 3317
220 Ga0500652_047940 3300053131 Bacteria 1737
221 Ga0500658_0018460 3300053134 Bacteria 2615
222 Ga0500573_0009948 3300053140 Bacteria 5300
223 Ga0500616_0020298 3300053153 Bacteria 3733
224 Ga0500627_0001530 3300053158 Bacteria 6509
225 Ga0501084_0182182 3300054114 Bacteria 1773
226 2523383882 2523231044 Bacteria 6434991
227 2585299332 2582581312 Bacteria 7308206
228 2585308795 2582581313 Bacteria 10042643
229 2585313492 2582581314 Bacteria 11452267
230 2616695070 2616644814 Bacteria 11555299
231 2643764922 2643221548 Bacteria 8053412
232 2644262280 2643221647 Bacteria 10741251
233 2644461238 2643221682 Bacteria 6743283
234 2644536301 2643221697 Bacteria 3575694
235 2738708060 2738541274 Bacteria 6909446
236 2739331533 2738543028 Bacteria 6917070
237 2739334312 2738543028 Bacteria 6917070
238 2753035760 2751185725 Bacteria 5740550
239 2753326215 2751185792 Bacteria 5739090
240 2784588570 2784132148 Bacteria 8627943
241 2785369504 2784746768 Bacteria 10036182
242 2786670609 2786546132 Bacteria 10419719
243 2804847054 2802429296 Bacteria 7227771
244 2808842065 2808606359 Bacteria 9866990
245 2808920579 2808606375 Bacteria 9466072
246 2809232183 2808606448 Bacteria 8656184
247 2812480522 2811994917 Bacteria 7761064
248 2819695372 2818991463 Bacteria 7948711
249 2842889052 2842888712 Bacteria 4279094
250 2862285658 2862281513 Bacteria 9621493
251 2862295486 2862290372 Bacteria 7471434
252 2862512235 2862507626 Bacteria 9425308
253 2867371890 2867369537 Bacteria 6501581
254 2873155726 2873151551 Bacteria 8625867
255 2895889587 2895880812 Bacteria 11255272
256 2918505635 2918501144 Bacteria 8668083
257 2946075921 2946072368 Bacteria 8999607
258 2947229227 2947224130 Bacteria 9938529
259 2954007406 2954002825 Bacteria 9173742
260 2954386238 2954380949 Bacteria 10050426
261 2954676930 2954673503 Bacteria 9685905
262 2954687228 2954682443 Bacteria 9862841
263 2954696872 2954691527 Bacteria 10720516
264 2954705264 2954701450 Bacteria 10834262
265 2954716246 2954711539 Bacteria 10867210
266 2954726188 2954721474 Bacteria 10456478
267 2954735623 2954731030 Bacteria 10243860
268 2954754478 2954749733 Bacteria 10366972
269 2956940956 2956939328 Bacteria 3474458
270 2966601611 2966598605 Bacteria 7676064
271 2990088926 2990088156 Bacteria 6657676
272 2997457842 2997451912 Bacteria 8492419
273 3001121934 3001119090 Bacteria 3449530
274 8008578884 8008574985 Bacteria 7815457
275 8023630784 8023623736 Bacteria 8593882
276 8025417692 8025413630 Bacteria 7014048
277 8025480352 8025478263 Bacteria 8209203
278 8054166070 8054160619 Bacteria 7783213
279 Ga0075430_100124149
280 JGI24738J21930_10015640
281 JGI24751J29686_10000292
282 rootL2_10125148
283 Ga0070682_100057241
284 Ga0070660_100015123
285 Ga0070714_100471676
286 Ga0068859_100097054
287 Ga0068860_100000902
288 Ga0081455_10050488
289 Ga0075364_10012069
290 Ga0075367_10044497
291 Ga0075369_10001216
292 Ga0097620_100097052
293 Ga0105250_10026287
294 Ga0105245_10123172
295 Ga0105245_10133441
296 Ga0105243_10080118
297 Ga0105248_10023275
298 Ga0105237_10004087
299 Ga0105239_10003301
300 Ga0105246_10000251
301 Ga0157372_10046047
302 Ga0157375_10064196
303 Ga0182007_10000488
304 Ga0206352_10863079
305 Ga0213875_10079169
306 Ga0209758_1012527
307 Ga0207426_1004467
308 Ga0207426_1018506
309 Ga0209051_1011661
310 Ga0207696_1027531
311 Ga0207705_10034723
312 Ga0207671_10016328
313 Ga0207657_10019426
314 Ga0207664_10043877
315 Ga0207683_10228912
316 Ga0207683_10252489
317 Ga0209371_1009127
318 Ga0307517_10033125
319 Ga0307517_10036318
320 Ga0307515_10000933
321 Ga0307511_10002973
322 Ga0307511_10030780
323 Ga0307512_10005910
324 Ga0265327_10000004
325 Ga0307513_10004004
326 Ga0307509_10021597
327 Ga0307509_10025981
328 Ga0307508_10039453
329 Ga0307508_10060340
330 Ga0307508_10075635
331 Ga0307514_10007783
332 Ga0307514_10030561
333 Ga0307514_10054954
334 Ga0307516_10007420
335 Ga0307516_10009305
336 Ga0307518_10057659
337 Ga0307518_10115264
338 Ga0307410_10032331
339 Ga0307406_10046586
340 Ga0307412_10016629
341 Ga0307416_100020501
342 Ga0307416_100167425
343 Ga0307507_10005078
344 Ga0307507_10020011
345 Ga0307507_10050422
346 Ga0307510_10004385
347 Ga0307510_10028901
348 Ga0307510_10028947
349 Ga0307510_10055644
350 Ga0307510_10073695
351 Ga0436364_0164876
352 Ga0451787_435500
353 Ga0451793_0060685
354 Ga0451837_0068282
355 Ga0451839_0993736
356 Ga0451853_0233058
357 Ga0451853_2091219
358 Ga0439455_0001475
359 Ga0450903_000074
360 Ga0439458_0000916
361 Ga0466963_0011873
362 Ga0466970_0001072
363 Ga0495627_012170
364 Ga0495592_0000781
365 Ga0495603_0001872
366 Ga0495603_0002370
367 Ga0495590_0026608
368 Ga0495629_0000980
369 Ga0495629_0004080
370 Ga0495629_0004831
371 Ga0495629_0249134
372 Ga0495638_0036958
373 Ga0495651_0054482
374 Ga0495651_0063243
375 Ga0495662_0001878
376 Ga0495664_0001126
377 Ga0495664_0171962
378 Ga0495594_0006786
379 Ga0495594_0011925
380 Ga0495594_0040457
381 Ga0495594_0092614
382 Ga0495607_0054193
383 Ga0495608_0041246
384 Ga0495610_0126255
385 Ga0495616_0013581
386 Ga0495618_0013428
387 Ga0495620_0004136
388 Ga0495630_0011381
389 Ga0495631_0006948
390 Ga0495631_0104290
391 Ga0495632_0101495
392 Ga0495652_0015334
393 Ga0495652_0070741
394 Ga0495640_0018099
395 Ga0495640_0033200
396 Ga0495587_0019257
397 Ga0495609_0012916
398 Ga0495645_0112093
399 Ga0495622_0004197
400 Ga0495622_0019938
401 Ga0495622_0023553
402 Ga0495622_0067029
403 Ga0495634_0004167
404 Ga0495611_0025742
405 Ga0495635_0008133
406 Ga0495635_0042520
407 Ga0495588_0001876
408 Ga0495657_0003014
409 Ga0495657_0032043
410 Ga0495657_0032879
411 Ga0495599_0103919
412 Ga0495646_0000479
413 Ga0495646_0125617
414 Ga0495613_0001734
415 Ga0495613_0002401
416 Ga0495613_0013676
417 Ga0495613_0108656
418 Ga0495613_0141824
419 Ga0495670_0060775
420 Ga0495671_0008906
421 Ga0495649_0055143
422 Ga0495589_0014992
423 Ga0495589_0037209
424 Ga0495581_0070437
425 Ga0495604_0001421
426 Ga0495604_0023434
427 Ga0495674_0206088
428 Ga0495676_0001080
429 Ga0495676_0001331
430 Ga0495676_0087980
431 Ga0495676_0181751
432 Ga0495687_000974
433 Ga0495687_014531
434 Ga0495685_001536
435 Ga0495685_007127
436 Ga0495685_009616
437 Ga0495681_0003199
438 Ga0495684_0094401
439 Ga0495593_0014717
440 Ga0495602_0080556
441 Ga0495614_0003335
442 Ga0495614_0023652
443 Ga0496100_0031474
444 Ga0496101_0020460
445 Ga0496102_0004816
446 Ga0496104_0004287
447 Ga0496105_0036664
448 Ga0496106_0000408
449 Ga0496107_0001823
450 Ga0496108_0006223
451 Ga0496109_0049681
452 Ga0496110_0189349
453 Ga0496111_0000328
454 Ga0496114_0091444
455 Ga0496114_0124890
456 Ga0496114_0142393
457 Ga0496114_0168312
458 Ga0496114_0250849
459 Ga0496121_0008908
460 Ga0496121_0239865
461 Ga0496125_0072028
462 Ga0496126_0017139
463 Ga0496126_0080853
464 Ga0501032_0010941
465 Ga0501032_0049146
466 Ga0501033_0019674
467 Ga0501034_0015114
468 Ga0501036_0042036
469 Ga0501037_0008281
470 Ga0501039_0004522
471 Ga0501039_0209914
472 Ga0501041_0050758
473 Ga0501042_0027724
474 Ga0501043_0018856
475 Ga0501043_0240606
476 Ga0501046_0013766
477 Ga0501047_0004991
478 Ga0501047_0014290
479 Ga0501048_0009946
480 Ga0501069_0027107
481 Ga0501035_0008849
482 Ga0501044_0000276
483 Ga0501044_0176957
484 Ga0501044_0218802
485 Ga0501044_0255849
486 Ga0501045_0154946
487 nmdc:mga00v17_20515_c1
488 nmdc:mga06z11_21616_c1
489 nmdc:mga0sz30_6568_c1
490 Ga0495619_0045447
491 Ga0500644_0006493
492 Ga0500566_0032885
493 Ga0500654_078522
494 Ga0500553_020974
495 Ga0500569_031683
496 Ga0500628_009012
497 Ga0500652_009318
498 Ga0500652_047940
499 Ga0500658_0018460
500 Ga0500573_0009948
501 Ga0500616_0020298
502 Ga0500627_0001530
503 Ga0501084_0182182
504 2523383882
505 2585299332
506 2585308795
507 2585313492
508 2616695070
509 2643764922
510 2644262280
511 2644461238
512 2644536301
513 2738708060
514 2739331533
515 2739334312
516 2753035760
517 2753326215
518 2784588570
519 2785369504
520 2786670609
521 2804847054
522 2808842065
523 2808920579
524 2809232183
525 2812480522
526 2819695372
527 2842889052
528 2862285658
529 2862295486
530 2862512235
531 2867371890
532 2873155726
533 2895889587
534 2918505635
535 2946075921
536 2947229227
537 2954007406
538 2954386238
539 2954676930
540 2954687228
541 2954696872
542 2954705264
543 2954716246
544 2954726188
545 2954735623
546 2954754478
547 2956940956
548 2966601611
549 2990088926
550 2997457842
551 3001121934
552 8008578884
553 8023630784
554 8025417692
555 8025480352
556 8054166070

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

243

392

0.98

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

258

367

0.94

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

135

231

0.91

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

20

131

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mpi-assembly2.cif.gz_C structure of the glutaryl-coenzyme a dehydrogenase glutaryl-coa complex 0.9189 1 372
3mpi-assembly2.cif.gz_C structure of the glutaryl-coenzyme a dehydrogenase glutaryl-coa complex 0.9142 1 372
6cxt-assembly1.cif.gz_B crystal structure of fad-dependent dehydrogenase 0.9109 1 370
1egc-assembly1.cif.gz_D structure of t255e, e376g mutant of human medium chain acyl-coa dehydrogenase complexed with octanoyl-coa 0.9097 1 368
5ol2-assembly2.cif.gz_F the electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile 0.9071 5 367
ID Description Score Start End Superfamily
af_P9WQG3_234_382_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9916 220 367 1.20.140.10
af_P9WQG3_121_229_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9743 105 214 2.40.110.10
af_P9WQG3_234_382_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9719 220 367 1.20.140.10
1t9gC03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9658 230 367 1.20.140.10
af_Q9VDT1_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9653 222 368 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A0J6VZ32-F1-model_v4 Acyl-CoA dehydrogenase fadE12 (EC 1.3.99.-) 0.9622 2 373 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A0J6VZ32-F1-model_v4 Acyl-CoA dehydrogenase fadE12 (EC 1.3.99.-) 0.9571 2 373 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A6I0FAM6-F1-model_v4 Acyl-CoA dehydrogenase 0.9496 4 373 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A2N5GDE7-F1-model_v4 Acyl-CoA dehydrogenase 0.9432 1 373 GO:0003995
GO:0050660
AF-A0A2N5GDE7-F1-model_v4 Acyl-CoA dehydrogenase 0.9407 1 373 GO:0003995
GO:0050660

Map