F382298

General Info

Members Datasets Scaffolds Average Seq Length
278 133 262 800

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10015534|Ga0081455_100155346
Length 901
Sequence MLGWLKLRLRALFRKNEIENELDEELRFYLENQTEVYVAQGMSPEVARAAALREFGGVEQAKEQCRDARGVSLIEELWQDLRYGARTLLKKPGFTAVAVITLALGIGANSAIFSVVNSILLRALPYKEPQRLMMVWTRITQLESTSGQTQFSNSATDFIEWRNQNQSFEQIAAFSNHNFNLSGGGEPEFLGGVRASANLLPLLGVEAKLGRTFRTEEDQPGADRVVILSHSLWQRRFASDPEIIGKKLTLNEETYTVVGVMPPGFQFPGKDSMLAGLRFPQKVDFYIPLALTASEARDRGRLYLAVIGRLKPHVTIAQAQADMDAVAERLVKQYKNGRGVMLVSLQHQVVGKARNALLIFLGAVAFVLLIACANVANLLLTRAAARHKEMAIRSALGASRLRLIRQLLTESLLLAMLGGTVGLVLAIWGVKLLIAIGPTNLPRADAISVDGRVFGFTLLISLLTGIIFGLAPALQASRLDLNESLKEGGTTSAVSSGRNRIRSLLVVSQVAVALVLLIGAGLMIRSFVRLLGVDPGFDPQHILTLDVRLPFHKYAGPQAGNDQPAGPQAAAFFQQAIERLKTMPGVRAAGGANPLPLSGGEEGSGFVIAGRWPPAPGEVFNAGRRWVSPDYFKVMGIRLQTGRAFTESDGSGAPRVLIINEAFVGAFFPDKDPIGKRLFFNRGSDGGYAWREIVGVVKDVKHSALDSDPKPEMYFPFSQFPSWNMTLVARTSGDPMSLAVAARRQVLAVDPNQAIYNIRTMEQLMDNSVSQRRFNMLLLSIFAAVSLVLAAVGIYSVMAYSVAQRTQEIGVRMALGARAANVLKLIIGQGMVLVLIGAALGLAAAFALTRVLTGLLYGVSPTDPATFAMIALLLLCVALVACYLPARRATKVDPIIALRYE

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
115 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
116 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.72
Rhizosphere 99.28
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000016 3300002459 Bacteria 112162
2 Ga0065712_10000681 3300005290 Bacteria 16280
3 Ga0065715_10091356 3300005293 Bacteria 5855
4 Ga0065715_10111981 3300005293 Unclassified 2550
5 Ga0065707_10001351 3300005295 Bacteria 9352
6 Ga0070676_10012830 3300005328 Bacteria 4586
7 Ga0070690_100043527 3300005330 Bacteria 2848
8 Ga0070670_100001612 3300005331 Bacteria 18240
9 Ga0068869_100031404 3300005334 Bacteria 3736
10 Ga0070680_100020276 3300005336 Bacteria 5275
11 Ga0070680_100085041 3300005336 Bacteria 2613
12 Ga0070682_100000222 3300005337 Bacteria 41129
13 Ga0070660_100029182 3300005339 Bacteria 4132
14 Ga0070689_100003526 3300005340 Bacteria 10409
15 Ga0070692_10026970 3300005345 Unclassified 2843
16 Ga0070675_100026214 3300005354 Bacteria 4676
17 Ga0070688_100000331 3300005365 Bacteria 24254
18 Ga0070659_100020670 3300005366 Bacteria 5005
19 Ga0070703_10000017 3300005406 Bacteria 80348
20 Ga0070709_10000006 3300005434 Bacteria 186534
21 Ga0070709_10000145 3300005434 Bacteria 47402
22 Ga0070711_100000001 3300005439 Bacteria 370591
23 Ga0070705_100000074 3300005440 Bacteria 54239
24 Ga0070705_100016098 3300005440 Bacteria 3879
25 Ga0070700_100014095 3300005441 Bacteria 4509
26 Ga0070700_100048143 3300005441 Bacteria 2641
27 Ga0070694_100000570 3300005444 Bacteria 20432
28 Ga0070694_100001197 3300005444 Bacteria 14940
29 Ga0070694_100001576 3300005444 Bacteria 13427
30 Ga0070694_100001955 3300005444 Bacteria 12228
31 Ga0070694_100002463 3300005444 Bacteria 10929
32 Ga0070694_100003340 3300005444 Bacteria 9604
33 Ga0070694_100004524 3300005444 Bacteria 8361
34 Ga0070694_100006980 3300005444 Bacteria 6865
35 Ga0070694_100008904 3300005444 Bacteria 6148
36 Ga0070694_100028025 3300005444 Unclassified 3662
37 Ga0070708_100000107 3300005445 Bacteria 54996
38 Ga0070708_100012374 3300005445 Bacteria 6962
39 Ga0070708_100034916 3300005445 Unclassified 4378
40 Ga0070662_100001236 3300005457 Bacteria 15692
41 Ga0070662_100056841 3300005457 Unclassified 2841
42 Ga0070681_10000061 3300005458 Bacteria 78507
43 Ga0070681_10000630 3300005458 Bacteria 28943
44 Ga0070685_10000598 3300005466 Bacteria 19966
45 Ga0070706_100001572 3300005467 Bacteria 23838
46 Ga0070706_100004865 3300005467 Bacteria 12866
47 Ga0070706_100025298 3300005467 Bacteria 5463
48 Ga0070706_100025950 3300005467 Bacteria 5392
49 Ga0070707_100000001 3300005468 Bacteria 320358
50 Ga0070707_100000064 3300005468 Bacteria 96008
51 Ga0070707_100000139 3300005468 Bacteria 68168
52 Ga0070707_100000264 3300005468 Bacteria 52088
53 Ga0070707_100022487 3300005468 Bacteria 5962
54 Ga0070707_100036015 3300005468 Bacteria 4721
55 Ga0070707_100067399 3300005468 Unclassified 3443
56 Ga0070707_100105099 3300005468 Bacteria 2738
57 Ga0070698_100003267 3300005471 Bacteria 17812
58 Ga0070698_100014845 3300005471 Bacteria 8234
59 Ga0070698_100027265 3300005471 Bacteria 5943
60 Ga0070698_100047856 3300005471 Bacteria 4371
61 Ga0070699_100000674 3300005518 Bacteria 31941
62 Ga0070699_100002502 3300005518 Bacteria 16497
63 Ga0070699_100018011 3300005518 Bacteria 6066
64 Ga0070699_100019241 3300005518 Bacteria 5877
65 Ga0070699_100023630 3300005518 Bacteria 5295
66 Ga0070699_100024929 3300005518 Bacteria 5157
67 Ga0070699_100035760 3300005518 Bacteria 4294
68 Ga0070699_100048585 3300005518 Bacteria 3672
69 Ga0070679_100040880 3300005530 Bacteria 4614
70 Ga0070697_100000530 3300005536 Bacteria 28718
71 Ga0070697_100009510 3300005536 Bacteria 7598
72 Ga0070697_100013171 3300005536 Bacteria 6484
73 Ga0070697_100027904 3300005536 Bacteria 4519
74 Ga0070696_100000111 3300005546 Bacteria 41669
75 Ga0070665_100127092 3300005548 Unclassified 2552
76 Ga0070664_100001148 3300005564 Bacteria 20979
77 Ga0068857_100000288 3300005577 Bacteria 34689
78 Ga0070702_100007758 3300005615 Bacteria 5156
79 Ga0068859_100017917 3300005617 Bacteria 7118
80 Ga0068859_100022500 3300005617 Bacteria 6320
81 Ga0068859_100029473 3300005617 Bacteria 5506
82 Ga0068859_100035829 3300005617 Bacteria 4979
83 Ga0068864_100008329 3300005618 Bacteria 8554
84 Ga0068866_10002208 3300005718 Bacteria 8094
85 Ga0068861_100007519 3300005719 Bacteria 7471
86 Ga0068851_10003223 3300005834 Bacteria 7231
87 Ga0068851_10004910 3300005834 Bacteria 6061
88 Ga0068863_100106661 3300005841 Unclassified 2666
89 Ga0068858_100015165 3300005842 Bacteria 7249
90 Ga0068858_100037855 3300005842 Bacteria 4473
91 Ga0068860_100028158 3300005843 Bacteria 5409
92 Ga0068860_100090348 3300005843 Bacteria 2917
93 Ga0068862_100024282 3300005844 Bacteria 5085
94 Ga0068862_100035576 3300005844 Bacteria 4219
95 Ga0081455_10001603 3300005937 Bacteria 27633
96 Ga0081455_10015534 3300005937 Bacteria 7392
97 Ga0081455_10024160 3300005937 Bacteria 5637
98 Ga0081455_10025203 3300005937 Bacteria 5494
99 Ga0081539_10000053 3300005985 Bacteria 264549
100 Ga0081539_10006434 3300005985 Bacteria 11267
101 Ga0070717_10030463 3300006028 Bacteria 4335
102 Ga0068871_100002552 3300006358 Bacteria 12429
103 Ga0075428_100013205 3300006844 Bacteria 9188
104 Ga0075428_100091257 3300006844 Bacteria 3322
105 Ga0075431_100017185 3300006847 Bacteria 7352
106 Ga0075431_100019333 3300006847 Bacteria 6943
107 Ga0075431_100118680 3300006847 Bacteria 2729
108 Ga0075434_100054672 3300006871 Bacteria 3966
109 Ga0075429_100028703 3300006880 Bacteria 4832
110 Ga0075429_100036615 3300006880 Bacteria 4268
111 Ga0097620_100017920 3300006931 Bacteria 7118
112 Ga0097620_100022500 3300006931 Bacteria 6320
113 Ga0097620_100029473 3300006931 Bacteria 5506
114 Ga0097620_100035829 3300006931 Bacteria 4979
115 Ga0111539_10000574 3300009094 Bacteria 47151
116 Ga0111539_10010677 3300009094 Bacteria 11565
117 Ga0111539_10013922 3300009094 Bacteria 10056
118 Ga0111539_10015857 3300009094 Bacteria 9360
119 Ga0111539_10029196 3300009094 Bacteria 6722
120 Ga0111539_10043514 3300009094 Bacteria 5382
121 Ga0111539_10059820 3300009094 Bacteria 4517
122 Ga0114129_10011537 3300009147 Bacteria 12582
123 Ga0114129_10034429 3300009147 Bacteria 7154
124 Ga0114129_10039232 3300009147 Bacteria 6676
125 Ga0114129_10041907 3300009147 Bacteria 6446
126 Ga0114129_10074039 3300009147 Unclassified 4744
127 Ga0114129_10085968 3300009147 Bacteria 4363
128 Ga0105243_10000120 3300009148 Bacteria 90809
129 Ga0105243_10000399 3300009148 Bacteria 45775
130 Ga0105243_10011927 3300009148 Bacteria 6572
131 Ga0105241_10002154 3300009174 Bacteria 14835
132 Ga0105241_10039264 3300009174 Bacteria 3570
133 Ga0105241_10043095 3300009174 Bacteria 3417
134 Ga0105242_10000008 3300009176 Bacteria 172348
135 Ga0105242_10000425 3300009176 Bacteria 33730
136 Ga0105242_10003197 3300009176 Bacteria 12757
137 Ga0105242_10031990 3300009176 Bacteria 4206
138 Ga0105248_10019594 3300009177 Bacteria 7488
139 Ga0105248_10024373 3300009177 Bacteria 6728
140 Ga0105248_10034732 3300009177 Bacteria 5641
141 Ga0105248_10036752 3300009177 Bacteria 5477
142 Ga0105248_10042497 3300009177 Bacteria 5098
143 Ga0105237_10001369 3300009545 Bacteria 32161
144 Ga0105237_10004137 3300009545 Bacteria 16904
145 Ga0105238_10019850 3300009551 Bacteria 6840
146 Ga0105238_10023883 3300009551 Bacteria 6231
147 Ga0105249_10049863 3300009553 Bacteria 3817
148 Ga0105239_10057574 3300010375 Bacteria 4263
149 Ga0157373_10001059 3300013100 Bacteria 21179
150 Ga0157374_10005399 3300013296 Bacteria 10742
151 Ga0157374_10017329 3300013296 Bacteria 6340
152 Ga0157378_10000015 3300013297 Bacteria 143601
153 Ga0157378_10000622 3300013297 Bacteria 33378
154 Ga0157378_10061252 3300013297 Bacteria 3357
155 Ga0163162_10001776 3300013306 Bacteria 20215
156 Ga0163162_10007182 3300013306 Bacteria 10815
157 Ga0163162_10021293 3300013306 Bacteria 6383
158 Ga0157375_10000920 3300013308 Bacteria 25603
159 Ga0157375_10035347 3300013308 Bacteria 4769
160 Ga0157375_10039254 3300013308 Bacteria 4555
161 Ga0163163_10000391 3300014325 Bacteria 41625
162 Ga0163163_10003188 3300014325 Bacteria 13894
163 Ga0163163_10014677 3300014325 Bacteria 7203
164 Ga0163163_10016152 3300014325 Bacteria 6929
165 Ga0157379_10021274 3300014968 Bacteria 5740
166 Ga0207653_10000066 3300025885 Bacteria 80383
167 Ga0207653_10000527 3300025885 Bacteria 14496
168 Ga0207699_10000003 3300025906 Bacteria 577076
169 Ga0207699_10000031 3300025906 Bacteria 137708
170 Ga0207645_10003497 3300025907 Bacteria 11892
171 Ga0207684_10005420 3300025910 Bacteria 11769
172 Ga0207684_10013870 3300025910 Bacteria 6960
173 Ga0207684_10041698 3300025910 Bacteria 3890
174 Ga0207654_10004966 3300025911 Bacteria 6726
175 Ga0207707_10000003 3300025912 Bacteria 642592
176 Ga0207671_10003078 3300025914 Bacteria 17037
177 Ga0207663_10000063 3300025916 Bacteria 53415
178 Ga0207660_10002612 3300025917 Bacteria 11820
179 Ga0207660_10057334 3300025917 Bacteria 2790
180 Ga0207657_10001162 3300025919 Bacteria 27986
181 Ga0207652_10000140 3300025921 Bacteria 76797
182 Ga0207652_10051915 3300025921 Bacteria 3517
183 Ga0207646_10000109 3300025922 Bacteria 112879
184 Ga0207646_10000208 3300025922 Bacteria 80070
185 Ga0207646_10002166 3300025922 Bacteria 23457
186 Ga0207646_10006575 3300025922 Bacteria 11995
187 Ga0207646_10015007 3300025922 Bacteria 7333
188 Ga0207646_10051879 3300025922 Unclassified 3670
189 Ga0207646_10062545 3300025922 Unclassified 3323
190 Ga0207694_10013163 3300025924 Bacteria 6227
191 Ga0207650_10000009 3300025925 Bacteria 483583
192 Ga0207650_10053926 3300025925 Bacteria 2981
193 Ga0207690_10015346 3300025932 Bacteria 4640
194 Ga0207706_10000102 3300025933 Bacteria 89878
195 Ga0207706_10006225 3300025933 Bacteria 11091
196 Ga0207686_10000023 3300025934 Bacteria 172422
197 Ga0207686_10004413 3300025934 Bacteria 7548
198 Ga0207709_10000062 3300025935 Bacteria 194534
199 Ga0207709_10000683 3300025935 Bacteria 27399
200 Ga0207670_10000034 3300025936 Bacteria 109898
201 Ga0207670_10031750 3300025936 Bacteria 3389
202 Ga0207665_10052526 3300025939 Unclassified 2746
203 Ga0207691_10004716 3300025940 Bacteria 13194
204 Ga0207711_10048535 3300025941 Bacteria 3631
205 Ga0207679_10003173 3300025945 Bacteria 10147
206 Ga0207651_10031190 3300025960 Unclassified 3404
207 Ga0207640_10032012 3300025981 Bacteria 3257
208 Ga0207640_10054891 3300025981 Bacteria 2607
209 Ga0207677_10031346 3300026023 Unclassified 3405
210 Ga0207703_10082202 3300026035 Bacteria 2687
211 Ga0207678_10015249 3300026067 Bacteria 6760
212 Ga0207678_10023179 3300026067 Bacteria 5431
213 Ga0207708_10012541 3300026075 Bacteria 6319
214 Ga0207708_10017513 3300026075 Bacteria 5394
215 Ga0207676_10002177 3300026095 Bacteria 14131
216 Ga0207674_10000024 3300026116 Bacteria 156174
217 Ga0207674_10007842 3300026116 Bacteria 12411
218 Ga0207674_10021658 3300026116 Bacteria 6920
219 Ga0207675_100002708 3300026118 Bacteria 17457
220 Ga0207675_100059726 3300026118 Bacteria 3558
221 Ga0207675_100062705 3300026118 Bacteria 3473
222 Ga0207428_10000135 3300027907 Bacteria 99170
223 Ga0207428_10011014 3300027907 Bacteria 8038
224 Ga0207428_10020160 3300027907 Bacteria 5670
225 Ga0268266_10086324 3300028379 Unclassified 2744
226 Ga0268264_10018030 3300028381 Bacteria 5773
227 Ga0268264_10028170 3300028381 Bacteria 4594
228 Ga0265338_10011287 3300028800 Bacteria 10336
229 Ga0265338_10024004 3300028800 Bacteria 6245
230 Ga0265339_10011566 3300031249 Bacteria 5426
231 Ga0307408_100007748 3300031548 Bacteria 7103
232 Ga0265314_10001248 3300031711 Bacteria 29000
233 Ga0307406_10001965 3300031901 Bacteria 11229
234 Ga0453683_0001399 3300044673 Bacteria 20960
235 Ga0495663_0000076 3300046525 Bacteria 44645
236 Ga0495598_0000129 3300046537 Bacteria 12755
237 Ga0495621_0000449 3300046539 Bacteria 10141
238 Ga0495636_0019552 3300047318 Unclassified 2724
239 Ga0496106_0008206 3300048909 Bacteria 7719
240 Ga0496112_0085006 3300048915 Bacteria 3130
241 Ga0501040_0021078 3300049576 Bacteria 4346
242 Ga0501040_0035843 3300049576 Unclassified 3366
243 Ga0501041_0020568 3300049577 Bacteria 3948
244 Ga0501071_0062276 3300049587 Bacteria 2703
245 Ga0501075_0110503 3300049591 Unclassified 2090
246 Ga0501076_0060182 3300049592 Bacteria 3021
247 Ga0501081_0038200 3300049743 Bacteria 3278
248 Ga0501045_0019070 3300049824 Bacteria 4885
249 nmdc:mga05p37_10939_c1 3300050507 Bacteria 10774
250 nmdc:mga05p37_5209_c1 3300050507 Bacteria 15256
251 nmdc:mga05p37_53044_c1 3300050507 Bacteria 4987
252 nmdc:mga05p37_62515_c1 3300050507 Bacteria 4582
253 nmdc:mga05p37_79969_c1 3300050507 Unclassified 4025
254 nmdc:mga09592_41673_c1 3300050508 Unclassified 3860
255 nmdc:mga06r32_16803_c1 3300050510 Bacteria 6671
256 nmdc:mga08y16_1160_c1 3300050511 Bacteria 25976
257 nmdc:mga08y16_1673_c1 3300050511 Bacteria 22480
258 nmdc:mga0n895_131731_c1 3300050512 Unclassified 2525
259 nmdc:mga0a205_24694_c1 3300050515 Bacteria 5718
260 nmdc:mga0a205_4175_c1 3300050515 Bacteria 12946
261 nmdc:mga0a205_55054_c1 3300050515 Bacteria 3842
262 Ga0501082_0048145 3300060353 Bacteria 3674

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049591 Ga0501075_0110503 Ga0501075_0110503_48_2006 646
2 3300049576 Ga0501040_0021078 Ga0501040_0021078_2346_4325 655
3 3300050515 nmdc:mga0a205_4175_c1 nmdc:mga0a205_4175_c1_10884_12911 672
4 3300025939 Ga0207665_10052526 Ga0207665_100525262 717
5 3300005336 Ga0070680_100020276 Ga0070680_1000202762 724
6 3300005339 Ga0070660_100029182 Ga0070660_1000291822 724
7 3300005366 Ga0070659_100020670 Ga0070659_1000206702 724
8 3300005458 Ga0070681_10000630 Ga0070681_100006307 724
9 3300005564 Ga0070664_100001148 Ga0070664_1000011485 724
10 3300005577 Ga0068857_100000288 Ga0068857_1000002888 724
11 3300025910 Ga0207684_10013870 Ga0207684_100138702 724
12 3300025925 Ga0207650_10053926 Ga0207650_100539262 724
13 3300025932 Ga0207690_10015346 Ga0207690_100153462 724
14 3300025945 Ga0207679_10003173 Ga0207679_100031734 724
15 3300026116 Ga0207674_10000024 Ga0207674_1000002475 724
16 3300005445 Ga0070708_100012374 Ga0070708_1000123742 725
17 3300005467 Ga0070706_100001572 Ga0070706_1000015724 725
18 3300005536 Ga0070697_100000530 Ga0070697_10000053013 727
19 3300005434 Ga0070709_10000006 Ga0070709_1000000686 730
20 3300025906 Ga0207699_10000003 Ga0207699_10000003166 730
21 3300014325 Ga0163163_10014677 Ga0163163_100146772 739
22 3300026118 Ga0207675_100062705 Ga0207675_1000627051 741
23 3300005434 Ga0070709_10000145 Ga0070709_1000014514 752
24 3300025906 Ga0207699_10000031 Ga0207699_1000003114 752
25 3300050510 nmdc:mga06r32_16803_c1 nmdc:mga06r32_16803_c1_1826_4420 752
26 3300005444 Ga0070694_100004524 Ga0070694_1000045246 753
27 3300005336 Ga0070680_100085041 Ga0070680_1000850411 755
28 3300005441 Ga0070700_100048143 Ga0070700_1000481431 755
29 3300013308 Ga0157375_10035347 Ga0157375_100353472 755
30 3300028381 Ga0268264_10028170 Ga0268264_100281702 755
31 3300005468 Ga0070707_100067399 Ga0070707_1000673992 760
32 3300025922 Ga0207646_10062545 Ga0207646_100625451 760
33 3300005468 Ga0070707_100000139 Ga0070707_1000001394 762
34 3300005518 Ga0070699_100019241 Ga0070699_1000192413 762
35 3300025922 Ga0207646_10000208 Ga0207646_100002085 762
36 3300013306 Ga0163162_10021293 Ga0163162_100212932 763
37 3300026116 Ga0207674_10021658 Ga0207674_100216582 764
38 3300047318 Ga0495636_0019552 Ga0495636_0019552_263_2701 765
39 3300005834 Ga0068851_10004910 Ga0068851_100049102 766
40 3300009545 Ga0105237_10001369 Ga0105237_1000136914 766
41 3300025885 Ga0207653_10000527 Ga0207653_100005276 766
42 3300009174 Ga0105241_10043095 Ga0105241_100430952 768
43 3300050507 nmdc:mga05p37_62515_c1 nmdc:mga05p37_62515_c1_1384_3780 768
44 3300005468 Ga0070707_100105099 Ga0070707_1001050992 771
45 3300005471 Ga0070698_100027265 Ga0070698_1000272652 771
46 3300005518 Ga0070699_100024929 Ga0070699_1000249292 771
47 3300005530 Ga0070679_100040880 Ga0070679_1000408802 771
48 3300025921 Ga0207652_10051915 Ga0207652_100519152 771
49 3300025922 Ga0207646_10051879 Ga0207646_100518792 771
50 3300005617 Ga0068859_100035829 Ga0068859_1000358292 772
51 3300006931 Ga0097620_100035829 Ga0097620_1000358292 772
52 3300005295 Ga0065707_10001351 Ga0065707_100013513 773
53 3300005518 Ga0070699_100000674 Ga0070699_1000006748 773
54 3300005546 Ga0070696_100000111 Ga0070696_1000001114 773
55 3300005617 Ga0068859_100022500 Ga0068859_1000225002 773
56 3300006844 Ga0075428_100091257 Ga0075428_1000912572 773
57 3300006931 Ga0097620_100022500 Ga0097620_1000225002 773
58 3300009177 Ga0105248_10036752 Ga0105248_100367522 773
59 3300006028 Ga0070717_10030463 Ga0070717_100304634 774
60 3300006847 Ga0075431_100118680 Ga0075431_1001186801 774
61 3300005468 Ga0070707_100000001 Ga0070707_1000000011 775
62 3300006871 Ga0075434_100054672 Ga0075434_1000546722 775
63 3300025922 Ga0207646_10006575 Ga0207646_100065751 775
64 3300005518 Ga0070699_100035760 Ga0070699_1000357602 776
65 3300050515 nmdc:mga0a205_55054_c1 nmdc:mga0a205_55054_c1_574_3222 776
66 3300005444 Ga0070694_100000570 Ga0070694_1000005703 777
67 3300005536 Ga0070697_100013171 Ga0070697_1000131712 777
68 3300005340 Ga0070689_100003526 Ga0070689_1000035266 778
69 3300005365 Ga0070688_100000331 Ga0070688_10000033111 778
70 3300005466 Ga0070685_10000598 Ga0070685_100005985 778
71 3300005468 Ga0070707_100022487 Ga0070707_1000224872 778
72 3300005718 Ga0068866_10002208 Ga0068866_100022083 778
73 3300009177 Ga0105248_10024373 Ga0105248_100243734 778
74 3300025922 Ga0207646_10015007 Ga0207646_100150074 778
75 3300025936 Ga0207670_10000034 Ga0207670_1000003442 778
76 3300025981 Ga0207640_10054891 Ga0207640_100548911 778
77 3300009147 Ga0114129_10074039 Ga0114129_100740393 779
78 3300009147 Ga0114129_10011537 Ga0114129_100115374 780
79 3300009148 Ga0105243_10000399 Ga0105243_1000039914 780
80 3300009176 Ga0105242_10003197 Ga0105242_100031972 780
81 3300013297 Ga0157378_10000015 Ga0157378_10000015111 780
82 3300013308 Ga0157375_10000920 Ga0157375_100009205 780
83 3300025935 Ga0207709_10000683 Ga0207709_1000068311 780
84 3300048909 Ga0496106_0008206 Ga0496106_0008206_4276_6696 780
85 3300050507 nmdc:mga05p37_10939_c1 nmdc:mga05p37_10939_c1_2986_5460 780
86 3300005290 Ga0065712_10000681 Ga0065712_100006811 781
87 3300005293 Ga0065715_10111981 Ga0065715_101119811 781
88 3300005406 Ga0070703_10000017 Ga0070703_1000001710 781
89 3300005441 Ga0070700_100014095 Ga0070700_1000140952 781
90 3300005444 Ga0070694_100001197 Ga0070694_1000011977 781
91 3300005444 Ga0070694_100006980 Ga0070694_1000069803 781
92 3300005937 Ga0081455_10025203 Ga0081455_100252032 781
93 3300009148 Ga0105243_10000120 Ga0105243_1000012020 781
94 3300009148 Ga0105243_10011927 Ga0105243_100119272 781
95 3300009176 Ga0105242_10000008 Ga0105242_1000000830 781
96 3300009551 Ga0105238_10019850 Ga0105238_100198502 781
97 3300013296 Ga0157374_10017329 Ga0157374_100173292 781
98 3300025885 Ga0207653_10000066 Ga0207653_1000006629 781
99 3300025934 Ga0207686_10000023 Ga0207686_1000002329 781
100 3300025935 Ga0207709_10000062 Ga0207709_1000006244 781
101 3300025960 Ga0207651_10031190 Ga0207651_100311901 781
102 3300026075 Ga0207708_10012541 Ga0207708_100125412 781
103 3300009147 Ga0114129_10034429 Ga0114129_100344293 782
104 3300009174 Ga0105241_10002154 Ga0105241_100021544 782
105 3300013296 Ga0157374_10005399 Ga0157374_100053993 782
106 3300013306 Ga0163162_10001776 Ga0163162_1000177611 782
107 3300025911 Ga0207654_10004966 Ga0207654_100049664 782
108 3300050507 nmdc:mga05p37_79969_c1 nmdc:mga05p37_79969_c1_1073_3772 782
109 3300005295 Ga0065707_10001351 Ga0065707_100013514 783
110 3300005354 Ga0070675_100026214 Ga0070675_1000262142 783
111 3300005844 Ga0068862_100024282 Ga0068862_1000242822 783
112 3300050507 nmdc:mga05p37_53044_c1 nmdc:mga05p37_53044_c1_433_2880 783
113 3300050508 nmdc:mga09592_41673_c1 nmdc:mga09592_41673_c1_341_2842 783
114 3300009147 Ga0114129_10039232 Ga0114129_100392323 786
115 3300009148 Ga0105243_10000120 Ga0105243_1000012029 786
116 3300009176 Ga0105242_10000008 Ga0105242_1000000821 786
117 3300025934 Ga0207686_10000023 Ga0207686_1000002320 786
118 3300025935 Ga0207709_10000062 Ga0207709_1000006235 786
119 3300031711 Ga0265314_10001248 Ga0265314_1000124818 786
120 3300050507 nmdc:mga05p37_5209_c1 nmdc:mga05p37_5209_c1_8168_10813 786
121 3300014325 Ga0163163_10003188 Ga0163163_100031884 787
122 3300005468 Ga0070707_100000001 Ga0070707_1000000013 789
123 3300005518 Ga0070699_100023630 Ga0070699_1000236302 789
124 3300009094 Ga0111539_10000574 Ga0111539_1000057424 789
125 3300025922 Ga0207646_10006575 Ga0207646_100065753 789
126 3300027907 Ga0207428_10000135 Ga0207428_1000013519 789
127 3300046539 Ga0495621_0000449 Ga0495621_0000449_6204_8660 789
128 3300050511 nmdc:mga08y16_1673_c1 nmdc:mga08y16_1673_c1_6244_8691 789
129 3300005985 Ga0081539_10006434 Ga0081539_100064349 790
130 3300009094 Ga0111539_10013922 Ga0111539_100139226 790
131 3300027907 Ga0207428_10011014 Ga0207428_100110145 790
132 3300050511 nmdc:mga08y16_1160_c1 nmdc:mga08y16_1160_c1_4637_7282 790
133 3300005440 Ga0070705_100000074 Ga0070705_10000007427 791
134 3300005467 Ga0070706_100025298 Ga0070706_1000252981 791
135 3300005471 Ga0070698_100047856 Ga0070698_1000478563 791
136 3300006847 Ga0075431_100019333 Ga0075431_1000193333 791
137 3300009094 Ga0111539_10010677 Ga0111539_100106778 791
138 3300009551 Ga0105238_10023883 Ga0105238_100238831 791
139 3300025910 Ga0207684_10041698 Ga0207684_100416981 791
140 3300050512 nmdc:mga0n895_131731_c1 nmdc:mga0n895_131731_c1_107_2512 791
141 3300005328 Ga0070676_10012830 Ga0070676_100128302 792
142 3300005345 Ga0070692_10026970 Ga0070692_100269701 792
143 3300005457 Ga0070662_100056841 Ga0070662_1000568411 792
144 3300005548 Ga0070665_100127092 Ga0070665_1001270921 792
145 3300005719 Ga0068861_100007519 Ga0068861_1000075192 792
146 3300005842 Ga0068858_100015165 Ga0068858_1000151655 792
147 3300005844 Ga0068862_100035576 Ga0068862_1000355761 792
148 3300006847 Ga0075431_100017185 Ga0075431_1000171851 792
149 3300006880 Ga0075429_100036615 Ga0075429_1000366152 792
150 3300009177 Ga0105248_10019594 Ga0105248_100195943 792
151 3300013308 Ga0157375_10039254 Ga0157375_100392542 792
152 3300014968 Ga0157379_10021274 Ga0157379_100212742 792
153 3300025907 Ga0207645_10003497 Ga0207645_100034977 792
154 3300025933 Ga0207706_10006225 Ga0207706_100062256 792
155 3300025940 Ga0207691_10004716 Ga0207691_100047166 792
156 3300025981 Ga0207640_10032012 Ga0207640_100320121 792
157 3300026023 Ga0207677_10031346 Ga0207677_100313462 792
158 3300026067 Ga0207678_10023179 Ga0207678_100231792 792
159 3300026075 Ga0207708_10017513 Ga0207708_100175132 792
160 3300026116 Ga0207674_10007842 Ga0207674_100078424 792
161 3300026118 Ga0207675_100002708 Ga0207675_1000027088 792
162 3300028379 Ga0268266_10086324 Ga0268266_100863241 792
163 3300031548 Ga0307408_100007748 Ga0307408_1000077482 792
164 3300031901 Ga0307406_10001965 Ga0307406_100019652 792
165 3300005985 Ga0081539_10000053 Ga0081539_10000053143 793
166 3300028800 Ga0265338_10011287 Ga0265338_100112875 793
167 3300031249 Ga0265339_10011566 Ga0265339_100115662 793
168 3300005439 Ga0070711_100000001 Ga0070711_100000001144 794
169 3300005468 Ga0070707_100000264 Ga0070707_10000026433 794
170 3300005518 Ga0070699_100018011 Ga0070699_1000180112 794
171 3300025916 Ga0207663_10000063 Ga0207663_1000006321 794
172 3300025922 Ga0207646_10000109 Ga0207646_1000010933 794
173 3300025924 Ga0207694_10013163 Ga0207694_100131634 794
174 3300046525 Ga0495663_0000076 Ga0495663_0000076_20308_22764 795
175 3300005843 Ga0068860_100028158 Ga0068860_1000281584 796
176 3300006358 Ga0068871_100002552 Ga0068871_1000025526 796
177 3300013297 Ga0157378_10000622 Ga0157378_100006225 796
178 3300006880 Ga0075429_100028703 Ga0075429_1000287032 797
179 3300009094 Ga0111539_10043514 Ga0111539_100435143 797
180 3300026118 Ga0207675_100059726 Ga0207675_1000597262 797
181 3300027907 Ga0207428_10020160 Ga0207428_100201603 797
182 3300005330 Ga0070690_100043527 Ga0070690_1000435271 798
183 3300005406 Ga0070703_10000017 Ga0070703_100000176 798
184 3300005444 Ga0070694_100001576 Ga0070694_1000015765 798
185 3300005444 Ga0070694_100008904 Ga0070694_1000089043 798
186 3300005458 Ga0070681_10000061 Ga0070681_100000615 798
187 3300005467 Ga0070706_100004865 Ga0070706_10000486511 798
188 3300005841 Ga0068863_100106661 Ga0068863_1001066611 798
189 3300005842 Ga0068858_100037855 Ga0068858_1000378554 798
190 3300005843 Ga0068860_100090348 Ga0068860_1000903482 798
191 3300009094 Ga0111539_10015857 Ga0111539_100158573 798
192 3300009147 Ga0114129_10041907 Ga0114129_100419073 798
193 3300009147 Ga0114129_10085968 Ga0114129_100859682 798
194 3300009148 Ga0105243_10000120 Ga0105243_1000012036 798
195 3300009176 Ga0105242_10000425 Ga0105242_100004259 798
196 3300009177 Ga0105248_10034732 Ga0105248_100347323 798
197 3300009177 Ga0105248_10042497 Ga0105248_100424972 798
198 3300010375 Ga0105239_10057574 Ga0105239_100575742 798
199 3300013297 Ga0157378_10061252 Ga0157378_100612522 798
200 3300013306 Ga0163162_10007182 Ga0163162_100071826 798
201 3300025885 Ga0207653_10000066 Ga0207653_1000006633 798
202 3300025910 Ga0207684_10005420 Ga0207684_1000542013 798
203 3300025912 Ga0207707_10000003 Ga0207707_1000000373 798
204 3300025917 Ga0207660_10002612 Ga0207660_100026122 798
205 3300025921 Ga0207652_10000140 Ga0207652_1000014059 798
206 3300025934 Ga0207686_10000023 Ga0207686_1000002314 798
207 3300025935 Ga0207709_10000062 Ga0207709_1000006229 798
208 3300025936 Ga0207670_10031750 Ga0207670_100317502 798
209 3300025941 Ga0207711_10048535 Ga0207711_100485352 798
210 3300026035 Ga0207703_10082202 Ga0207703_100822021 798
211 3300028381 Ga0268264_10018030 Ga0268264_100180301 798
212 3300005937 Ga0081455_10001603 Ga0081455_100016032 799
213 3300005937 Ga0081455_10024160 Ga0081455_100241603 799
214 3300049577 Ga0501041_0020568 Ga0501041_0020568_654_3068 799
215 3300049587 Ga0501071_0062276 Ga0501071_0062276_150_2564 799
216 3300049592 Ga0501076_0060182 Ga0501076_0060182_400_2814 799
217 3300049743 Ga0501081_0038200 Ga0501081_0038200_329_2743 799
218 3300049824 Ga0501045_0019070 Ga0501045_0019070_1279_3693 799
219 3300060353 Ga0501082_0048145 Ga0501082_0048145_1059_3473 799
220 3300005293 Ga0065715_10091356 Ga0065715_100913562 800
221 3300005331 Ga0070670_100001612 Ga0070670_1000016122 800
222 3300005337 Ga0070682_100000222 Ga0070682_10000022211 800
223 3300005617 Ga0068859_100017917 Ga0068859_1000179172 800
224 3300005937 Ga0081455_10015534 Ga0081455_100155346 800
225 3300006931 Ga0097620_100017920 Ga0097620_1000179202 800
226 3300009094 Ga0111539_10059820 Ga0111539_100598202 800
227 3300044673 Ga0453683_0001399 Ga0453683_0001399_744_3314 800
228 3300046537 Ga0495598_0000129 Ga0495598_0000129_9915_12371 800
229 3300049576 Ga0501040_0035843 Ga0501040_0035843_451_2871 800
230 3300005445 Ga0070708_100000107 Ga0070708_10000010723 801
231 3300005457 Ga0070662_100001236 Ga0070662_1000012364 801
232 3300005518 Ga0070699_100002502 Ga0070699_1000025027 801
233 3300025917 Ga0207660_10057334 Ga0207660_100573342 801
234 3300025919 Ga0207657_10001162 Ga0207657_1000116217 801
235 3300025933 Ga0207706_10000102 Ga0207706_1000010269 801
236 3300026067 Ga0207678_10015249 Ga0207678_100152493 801
237 3300048915 Ga0496112_0085006 Ga0496112_0085006_115_2544 801
238 3300005444 Ga0070694_100001955 Ga0070694_1000019556 802
239 3300028800 Ga0265338_10024004 Ga0265338_100240043 803
240 3300005468 Ga0070707_100000064 Ga0070707_1000000644 804
241 3300005518 Ga0070699_100048585 Ga0070699_1000485852 804
242 3300005617 Ga0068859_100029473 Ga0068859_1000294732 804
243 3300006844 Ga0075428_100013205 Ga0075428_1000132052 804
244 3300006931 Ga0097620_100029473 Ga0097620_1000294732 804
245 3300009094 Ga0111539_10029196 Ga0111539_100291962 804
246 3300025922 Ga0207646_10002166 Ga0207646_100021667 804
247 3300005434 Ga0070709_10000006 Ga0070709_10000006112 805
248 3300025906 Ga0207699_10000003 Ga0207699_10000003138 805
249 3300005444 Ga0070694_100028025 Ga0070694_1000280252 809
250 3300005618 Ga0068864_100008329 Ga0068864_1000083292 809
251 3300009553 Ga0105249_10049863 Ga0105249_100498632 809
252 3300014325 Ga0163163_10016152 Ga0163163_100161523 809
253 3300026095 Ga0207676_10002177 Ga0207676_100021774 809
254 3300050515 nmdc:mga0a205_24694_c1 nmdc:mga0a205_24694_c1_1718_4147 809
255 3300005471 Ga0070698_100003267 Ga0070698_1000032672 810
256 3300005536 Ga0070697_100027904 Ga0070697_1000279042 810
257 3300002459 JGI24751J29686_10000016 JGI24751J29686_1000001628 812
258 3300005334 Ga0068869_100031404 Ga0068869_1000314042 812
259 3300005440 Ga0070705_100016098 Ga0070705_1000160982 812
260 3300005444 Ga0070694_100002463 Ga0070694_1000024633 812
261 3300005444 Ga0070694_100003340 Ga0070694_1000033402 812
262 3300005445 Ga0070708_100000107 Ga0070708_10000010720 812
263 3300005445 Ga0070708_100034916 Ga0070708_1000349162 812
264 3300005467 Ga0070706_100025950 Ga0070706_1000259503 812
265 3300005468 Ga0070707_100036015 Ga0070707_1000360152 812
266 3300005471 Ga0070698_100014845 Ga0070698_1000148453 812
267 3300005518 Ga0070699_100002502 Ga0070699_1000025024 812
268 3300005536 Ga0070697_100009510 Ga0070697_1000095102 812
269 3300005615 Ga0070702_100007758 Ga0070702_1000077582 812
270 3300005834 Ga0068851_10003223 Ga0068851_100032233 812
271 3300009174 Ga0105241_10039264 Ga0105241_100392642 812
272 3300009176 Ga0105242_10031990 Ga0105242_100319902 812
273 3300009545 Ga0105237_10004137 Ga0105237_100041375 812
274 3300013100 Ga0157373_10001059 Ga0157373_1000105911 812
275 3300014325 Ga0163163_10000391 Ga0163163_100003917 812
276 3300025914 Ga0207671_10003078 Ga0207671_100030783 812
277 3300025925 Ga0207650_10000009 Ga0207650_10000009114 812
278 3300025934 Ga0207686_10004413 Ga0207686_100044132 812

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

780

894

0.93

PF02687

FtsX

FtsX-like permease family

361

481

0.81

PF12704

MacB_PCD

MacB-like periplasmic core domain

95

326

0.76

PF12704

MacB_PCD

MacB-like periplasmic core domain

505

748

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7c-assembly1.cif.gz_B-2 heme exporter in the unliganded form 0.8336 690 809
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7655 53 263
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7361 59 258
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7224 59 258
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7117 53 263
ID Description Score Start End Superfamily
af_Q9Y584_69_186_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.4756 317 432 1.10.10.1740
af_Q1PDX9_48_208_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.397 268 423 1.10.1760.20
af_A0A1D6JR45_49_209_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.3926 268 419 1.10.1760.20
af_Q9Y584_69_186_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.3906 317 432 1.10.10.1740
af_A0A2R8QM83_20_199_1.10.287.1260 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3882 283 398 1.10.287.1260
ID Description Score Start End GO Terms
AF-A0A845U2A3-F1-model_v4 ABC transporter permease 0.9704 1 812 GO:0005886
GO:0022857
AF-A0A845U2A3-F1-model_v4 ABC transporter permease 0.9692 1 812 GO:0005886
GO:0022857
AF-A0A2V5XA48-F1-model_v4 ABC transporter permease 0.9691 6 812 GO:0005886
GO:0022857
AF-A0A2V5XA48-F1-model_v4 ABC transporter permease 0.9667 6 812 GO:0005886
GO:0022857
AF-A0A7V9BI38-F1-model_v4 ABC transporter permease 0.9631 1 810 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
82.48 0.74 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map