F382080

General Info

Members Datasets Scaffolds Average Seq Length
277 197 554 486

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221561|2643828135
Length 544
Sequence TFVDQVKLHVAAGRGGNGVASVHREKFKPLGGPDGGNGGPGGSVILRVDPDITTLIDYHHSPVRRGENGRQGAGSHKNGAHGADMVLPIPDGTVVTDDKGNVIADMVGAGTELVIAKGGNGGLGNAALASSKRKAPGFALLGEPGDELDIVLELKVVADIGLVGFPSAGKSSLIAAISRARPKIADYPFTTLVPNLGVVRAGDTTFTVADVPGLIEGAADGRGLGHDFLRHIERCAALLHVIDTATIEPGRNPVEDLDIMENELSRYGGLEDRPRLVALNKVDVPDGRDIASFVVEELRDRGLRVFEVSAASGEGMRELTFAMAELVSRARAEKPVVEVPRMVIRPKSADGSGDFTIKETGEGWRVRGEKPERWVRQTDFNNEEAVGFLADRLNALGVEKKLVELGAEEGDAVLIGHADNAVVFDFKPGIEAGAEMLGRRGEDERLREERPAATRRRDIQEQMPERSETETRADVARRLDSGDAGPMSYVVGSEEDPDWNEFDPDAQVAGEGTDASEDAVAEQVDGTDVAEDATTERATEADES

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
38 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
74 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
75 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
76 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
77 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
78 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
93 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
143 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
147 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
154 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
155 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
156 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 2643221561 Nocardioides sp. Root151 Isolate Unclassified
162 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
163 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
164 2643221576 Nocardioides sp. Root614 Isolate Unclassified
165 2643221590 Nocardioides sp. Root682 Isolate Unclassified
166 2643221615 Nocardioides sp. Root224 Isolate Unclassified
167 2643221617 Nocardioides sp. Root79 Isolate Unclassified
168 2643221620 Nocardioides sp. Root240 Isolate Unclassified
169 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
170 2643221641 Nocardioides sp. Root122 Isolate Unclassified
171 2643221649 Leifsonia sp. Root4 Isolate Unclassified
172 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
173 2643221696 Nocardioides sp. Root140 Isolate Unclassified
174 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
175 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
176 2738541305 Nocardioides sp. CF167 Isolate Unclassified
177 2739367898 Nocardioides sp. CF479 Isolate Unclassified
178 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
179 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
180 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
181 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
182 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
183 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
184 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
185 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
186 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
187 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
188 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
189 2891562705 Microbispora tritici MT50 Isolate Unclassified
190 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
191 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
192 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
193 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
194 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
195 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
196 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
197 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.2
Metatranscriptomes 1.44
Isolates 13.36

Biome Distribution

Category Percentage (%)
Aerial Root 0.72
Bulb 0
Endosphere 12.27
Nodule 0.36
Rhizoplane 6.5
Rhizosphere 66.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100143399 3300005331 Bacteria 2066
2 Ga0070682_100018625 3300005337 Bacteria 4063
3 Ga0070660_100036431 3300005339 Bacteria 3727
4 Ga0070691_10062286 3300005341 Bacteria 1796
5 Ga0070659_100030400 3300005366 Bacteria 4180
6 Ga0070659_100199228 3300005366 Bacteria 1648
7 Ga0070714_100030929 3300005435 Bacteria 4460
8 Ga0070701_10001495 3300005438 Bacteria 8661
9 Ga0070700_100002680 3300005441 Bacteria 9097
10 Ga0070681_10032293 3300005458 Bacteria 5253
11 Ga0070698_100020921 3300005471 Bacteria 6855
12 Ga0070679_100004648 3300005530 Bacteria 12673
13 Ga0070684_100021783 3300005535 Bacteria 5338
14 Ga0070672_100016091 3300005543 Bacteria 5349
15 Ga0068855_100106481 3300005563 Bacteria 3223
16 Ga0070664_100026514 3300005564 Bacteria 4807
17 Ga0068856_100101731 3300005614 Bacteria 2866
18 Ga0070702_100027149 3300005615 Bacteria 3085
19 Ga0068861_100012521 3300005719 Bacteria 5917
20 Ga0068861_100049241 3300005719 Bacteria 3189
21 Ga0068870_10004805 3300005840 Bacteria 5841
22 Ga0068860_100001180 3300005843 Bacteria 28624
23 Ga0081455_10006334 3300005937 Bacteria 12707
24 Ga0081455_10007174 3300005937 Bacteria 11782
25 Ga0081455_10011144 3300005937 Bacteria 9048
26 Ga0081455_10014161 3300005937 Bacteria 7835
27 Ga0081455_10041641 3300005937 Bacteria 4037
28 Ga0081455_10067796 3300005937 Bacteria 2972
29 Ga0081539_10000170 3300005985 Bacteria 152854
30 Ga0081539_10000682 3300005985 Bacteria 67986
31 Ga0075365_10018085 3300006038 Bacteria 4327
32 Ga0075365_10020619 3300006038 Bacteria 4091
33 Ga0075365_10046817 3300006038 Bacteria 2841
34 Ga0075365_10049592 3300006038 Bacteria 2766
35 Ga0075365_10057721 3300006038 Bacteria 2582
36 Ga0075365_10059522 3300006038 Bacteria 2546
37 Ga0075365_10065852 3300006038 Bacteria 2429
38 Ga0075365_10123564 3300006038 Bacteria 1787
39 Ga0075368_10008846 3300006042 Bacteria 3607
40 Ga0075363_100001624 3300006048 Bacteria 8657
41 Ga0075363_100005455 3300006048 Bacteria 5660
42 Ga0075363_100015057 3300006048 Bacteria 3793
43 Ga0075367_10003367 3300006178 Bacteria 7606
44 Ga0075370_10003880 3300006353 Bacteria 7165
45 Ga0075370_10014839 3300006353 Bacteria 4161
46 Ga0075370_10037705 3300006353 Bacteria 2718
47 Ga0075428_100163535 3300006844 Bacteria 2415
48 Ga0075431_100219432 3300006847 Bacteria 1940
49 Ga0068865_100004169 3300006881 Bacteria 8700
50 Ga0105245_10052108 3300009098 Bacteria 3670
51 Ga0105245_10174057 3300009098 Bacteria 2052
52 Ga0105243_10007573 3300009148 Bacteria 8342
53 Ga0105243_10030084 3300009148 Bacteria 4179
54 Ga0105238_10098746 3300009551 Bacteria 2904
55 Ga0105238_10157324 3300009551 Bacteria 2248
56 Ga0105239_10128633 3300010375 Bacteria 2816
57 Ga0157372_10164221 3300013307 Bacteria 2567
58 Ga0157372_10172105 3300013307 Bacteria 2506
59 Ga0163163_10016604 3300014325 Bacteria 6845
60 Ga0163163_10092876 3300014325 Bacteria 3033
61 Ga0157377_10011946 3300014745 Bacteria 4352
62 Ga0206354_11465456 3300020081 Bacteria 2695
63 Ga0206353_11170554 3300020082 Bacteria 5234
64 Ga0213875_10032580 3300021388 Bacteria 2462
65 Ga0224712_10015863 3300022467 Bacteria 2460
66 Ga0207643_10005670 3300025908 Bacteria 6679
67 Ga0207707_10010447 3300025912 Bacteria 8055
68 Ga0207660_10138233 3300025917 Bacteria 1861
69 Ga0207657_10019609 3300025919 Bacteria 6414
70 Ga0207657_10075331 3300025919 Bacteria 2848
71 Ga0207694_10120458 3300025924 Bacteria 2095
72 Ga0207664_10030982 3300025929 Bacteria 4089
73 Ga0207690_10012467 3300025932 Bacteria 5084
74 Ga0207690_10137829 3300025932 Bacteria 1794
75 Ga0207691_10004838 3300025940 Bacteria 13020
76 Ga0207679_10020909 3300025945 Bacteria 4426
77 Ga0207640_10127077 3300025981 Bacteria 1837
78 Ga0207678_10057384 3300026067 Bacteria 3350
79 Ga0207708_10004020 3300026075 Bacteria 10818
80 Ga0207708_10027251 3300026075 Bacteria 4326
81 Ga0207702_10069481 3300026078 Bacteria 3028
82 Ga0207648_10001192 3300026089 Bacteria 29118
83 Ga0207648_10037750 3300026089 Bacteria 4254
84 Ga0207676_10158380 3300026095 Bacteria 1959
85 Ga0207674_10043936 3300026116 Bacteria 4605
86 Ga0207675_100012420 3300026118 Bacteria 7957
87 Ga0207428_10004557 3300027907 Bacteria 13127
88 Ga0268264_10000987 3300028381 Bacteria 29098
89 Ga0265340_10006963 3300031247 Bacteria 6172
90 Ga0307408_100040741 3300031548 Bacteria 3290
91 Ga0307407_10019196 3300031903 Bacteria 3476
92 Ga0307407_10058996 3300031903 Bacteria 2233
93 Ga0307412_10012017 3300031911 Bacteria 5031
94 Ga0307409_100070380 3300031995 Bacteria 2776
95 Ga0307409_100082828 3300031995 Bacteria 2599
96 Ga0307416_100051292 3300032002 Bacteria 3294
97 Ga0307415_100002830 3300032126 Bacteria 8687
98 Ga0373925_0000001 3300037068 Bacteria 402692
99 Ga0395900_0017058 3300037418 Bacteria 7413
100 Ga0395900_0017198 3300037418 Bacteria 7380
101 Ga0395900_0069154 3300037418 Bacteria 3629
102 Ga0395900_0103132 3300037418 Bacteria 2930
103 Ga0395898_0009689 3300037466 Bacteria 10101
104 Ga0395898_0017301 3300037466 Bacteria 7365
105 Ga0436364_1546886 3300037853 Bacteria 5866
106 Ga0395901_0006306 3300038443 Bacteria 12014
107 Ga0451833_0276161 3300041491 Bacteria 4559
108 Ga0451837_1052852 3300041494 Bacteria 3865
109 Ga0451853_0057221 3300041512 Bacteria 7174
110 Ga0451853_3021530 3300041512 Bacteria 2000
111 Ga0439445_0004879 3300042004 Bacteria 3048
112 Ga0439446_0019179 3300042156 Bacteria 1921
113 Ga0439434_0007913 3300042435 Bacteria 3117
114 Ga0466969_0043421 3300044656 Bacteria 2240
115 Ga0466969_0056602 3300044656 Bacteria 1914
116 Ga0466972_0018370 3300044658 Bacteria 3495
117 Ga0466972_0037395 3300044658 Bacteria 2374
118 Ga0466965_0007730 3300044683 Bacteria 4947
119 Ga0466966_0001007 3300044684 Bacteria 17992
120 Ga0466966_0014281 3300044684 Bacteria 5258
121 Ga0466966_0026977 3300044684 Bacteria 3746
122 Ga0466966_0057499 3300044684 Bacteria 2459
123 Ga0466966_0065322 3300044684 Bacteria 2288
124 Ga0466961_0005078 3300044693 Bacteria 8281
125 Ga0466961_0006966 3300044693 Bacteria 7190
126 Ga0466961_0028801 3300044693 Bacteria 3572
127 Ga0466963_0068044 3300044694 Bacteria 2391
128 Ga0466971_0002183 3300044719 Bacteria 8272
129 Ga0466970_0007151 3300044765 Bacteria 5588
130 Ga0466970_0008701 3300044765 Bacteria 5113
131 Ga0466970_0013504 3300044765 Bacteria 4188
132 Ga0466957_0011088 3300044842 Bacteria 5188
133 Ga0466960_0017066 3300044901 Bacteria 3160
134 Ga0466960_0066833 3300044901 Bacteria 1779
135 Ga0466959_0007811 3300045049 Bacteria 7527
136 Ga0466959_0037699 3300045049 Bacteria 3572
137 Ga0466967_0023415 3300045976 Bacteria 5060
138 Ga0466967_0073632 3300045976 Bacteria 3065
139 Ga0466967_0078509 3300045976 Bacteria 2974
140 Ga0466967_0161606 3300045976 Bacteria 2103
141 Ga0466967_0217286 3300045976 Bacteria 1815
142 Ga0495653_0037777 3300046463 Bacteria 3791
143 Ga0495662_0000253 3300046476 Bacteria 22699
144 Ga0495666_0001455 3300046526 Bacteria 11535
145 Ga0495665_0006386 3300046531 Bacteria 6362
146 Ga0495640_0010020 3300046533 Bacteria 7347
147 Ga0495645_0030122 3300046543 Bacteria 3952
148 Ga0495634_0033911 3300046642 Bacteria 3504
149 Ga0495635_0074159 3300046663 Bacteria 2331
150 Ga0495623_0008769 3300046679 Bacteria 6565
151 Ga0495670_0066569 3300046691 Bacteria 1818
152 Ga0495581_0005940 3300047315 Bacteria 7077
153 Ga0495604_0001196 3300047317 Bacteria 21428
154 Ga0495675_0014932 3300047444 Bacteria 4911
155 Ga0496100_0084513 3300048903 Bacteria 2151
156 Ga0496102_0025344 3300048905 Bacteria 5279
157 Ga0496102_0118102 3300048905 Bacteria 2475
158 Ga0496105_0004021 3300048908 Bacteria 10999
159 Ga0496105_0071006 3300048908 Bacteria 2878
160 Ga0496107_0004467 3300048910 Bacteria 9484
161 Ga0496108_0082588 3300048911 Bacteria 2725
162 Ga0496109_0039506 3300048912 Bacteria 4271
163 Ga0496109_0073164 3300048912 Bacteria 3149
164 Ga0496109_0082821 3300048912 Bacteria 2958
165 Ga0496110_0030022 3300048913 Bacteria 4684
166 Ga0496110_0093916 3300048913 Bacteria 2685
167 Ga0496111_0098485 3300048914 Bacteria 2147
168 Ga0496113_0045261 3300048916 Bacteria 3263
169 Ga0496114_0010799 3300048917 Bacteria 7269
170 Ga0496114_0091535 3300048917 Bacteria 2583
171 Ga0496114_0195867 3300048917 Bacteria 1769
172 Ga0496115_0001227 3300048918 Bacteria 18411
173 Ga0496117_0000216 3300048920 Bacteria 111598
174 Ga0496123_0006786 3300048926 Bacteria 10995
175 Ga0496124_0019382 3300048927 Bacteria 6333
176 Ga0501318_001122 3300049534 Bacteria 2004
177 Ga0501031_0002886 3300049568 Bacteria 10985
178 Ga0501032_0022106 3300049569 Bacteria 4414
179 Ga0501032_0050951 3300049569 Bacteria 2791
180 Ga0501033_0037875 3300049570 Bacteria 3608
181 Ga0501033_0064247 3300049570 Bacteria 2701
182 Ga0501034_0011971 3300049571 Bacteria 8966
183 Ga0501037_0030371 3300049573 Bacteria 3994
184 Ga0501037_0036142 3300049573 Bacteria 3641
185 Ga0501038_0008979 3300049574 Bacteria 9172
186 Ga0501039_0006825 3300049575 Bacteria 8685
187 Ga0501039_0045335 3300049575 Bacteria 3397
188 Ga0501039_0045595 3300049575 Bacteria 3387
189 Ga0501041_0002007 3300049577 Bacteria 11447
190 Ga0501042_0015522 3300049578 Bacteria 5216
191 Ga0501042_0024296 3300049578 Bacteria 4250
192 Ga0501043_0039304 3300049579 Bacteria 3718
193 Ga0501043_0086168 3300049579 Bacteria 2468
194 Ga0501046_0000184 3300049580 Bacteria 63497
195 Ga0501046_0102430 3300049580 Bacteria 2195
196 Ga0501047_0030501 3300049581 Bacteria 5197
197 Ga0501067_0038315 3300049583 Bacteria 2662
198 Ga0501070_0014863 3300049586 Bacteria 6549
199 Ga0501071_0018493 3300049587 Bacteria 4825
200 Ga0501071_0055572 3300049587 Bacteria 2858
201 Ga0501071_0178034 3300049587 Bacteria 1593
202 Ga0501072_0031891 3300049588 Bacteria 4125
203 Ga0501073_0107304 3300049589 Bacteria 1937
204 Ga0501076_0022853 3300049592 Bacteria 4811
205 Ga0501077_0073445 3300049593 Bacteria 2167
206 Ga0501079_0016088 3300049741 Bacteria 5716
207 Ga0501079_0075833 3300049741 Bacteria 2601
208 Ga0501080_0164141 3300049742 Bacteria 2050
209 Ga0501080_0197532 3300049742 Bacteria 1847
210 Ga0501035_0007374 3300049822 Bacteria 10279
211 Ga0501044_0010047 3300049823 Bacteria 10284
212 nmdc:mga03n38_3131_c1 3300050490 Bacteria 5262
213 nmdc:mga00v17_14491_c1 3300050491 Bacteria 4402
214 nmdc:mga00v17_21161_c1 3300050491 Bacteria 3737
215 nmdc:mga0yw44_11004_c1 3300050492 Bacteria 4645
216 nmdc:mga0yw44_14066_c1 3300050492 Bacteria 4235
217 nmdc:mga0yw44_22344_c1 3300050492 Bacteria 3547
218 nmdc:mga0yw44_45943_c1 3300050492 Bacteria 2620
219 nmdc:mga0yw44_60787_c1 3300050492 Bacteria 2315
220 nmdc:mga0yw44_63053_c1 3300050492 Bacteria 2278
221 nmdc:mga0yw44_64502_c1 3300050492 Bacteria 2255
222 nmdc:mga06z11_2774_c1 3300050494 Bacteria 6714
223 nmdc:mga04h51_1226_c1 3300050495 Bacteria 5929
224 nmdc:mga07m45_362_c1 3300050496 Bacteria 17810
225 nmdc:mga05p37_33264_c1 3300050507 Bacteria 6315
226 nmdc:mga08y16_99916_c1 3300050511 Bacteria 3021
227 Ga0495601_0003320 3300053077 Bacteria 9205
228 Ga0495619_0079960 3300053085 Bacteria 2199
229 Ga0500644_0000128 3300053088 Bacteria 46307
230 Ga0500556_0000417 3300053104 Bacteria 30638
231 Ga0500593_001815 3300053117 Bacteria 7667
232 Ga0500573_0024690 3300053140 Bacteria 3455
233 Ga0500616_0000076 3300053153 Bacteria 216836
234 Ga0501084_0054198 3300054114 Bacteria 3354
235 Ga0501084_0251183 3300054114 Bacteria 1493
236 Ga0501082_0132745 3300060353 Bacteria 2160
237 Ga0466962_0002275 3300061719 Bacteria 9104
238 Ga0466962_0003191 3300061719 Bacteria 7789
239 Ga0530510_0013846 3300061734 Bacteria 5680
240 Ga0530510_0176166 3300061734 Bacteria 1585
241 2643828135 2643221561 Bacteria 4984412
242 2555230039 2554235227 Bacteria 3637389
243 2587862804 2585428094 Bacteria 3604039
244 2643893287 2643221576 Bacteria 5214352
245 2643961654 2643221590 Bacteria 5214697
246 2644090067 2643221615 Bacteria 5487866
247 2644102713 2643221617 Bacteria 5139111
248 2644118375 2643221620 Bacteria 5134593
249 2644183217 2643221632 Bacteria 3406696
250 2644231321 2643221641 Bacteria 4490190
251 2644279698 2643221649 Bacteria 3867359
252 2644319912 2643221657 Bacteria 5490246
253 2644531224 2643221696 Bacteria 5431823
254 2655032756 2654587600 Bacteria 3911798
255 2676482452 2675903059 Bacteria 8644972
256 2738871573 2738541305 Bacteria 4910150
257 2740166649 2739367898 Bacteria 4367674
258 2774393757 2773857762 Bacteria 5971770
259 2799184353 2799112218 Bacteria 4315149
260 2809195365 2808606439 Bacteria 5952208
261 2812333966 2811994874 Bacteria 5367947
262 2812350239 2811994878 Bacteria 5992952
263 2855387468 2855386786 Bacteria 4752232
264 2856743217 2856741275 Bacteria 8096094
265 2857484885 2857481737 Bacteria 4761446
266 2857710590 2857710386 Bacteria 3186771
267 2891396155 2891395885 Bacteria 9251614
268 2891558562 2891554331 Bacteria 8812224
269 2891568696 2891562705 Bacteria 8039471
270 2891972138 2891968417 Bacteria 5821697
271 2974326512 2974324384 Bacteria 3750535
272 2984579140 2984576629 Bacteria 4248407
273 2990259966 2990256926 Bacteria 4252839
274 8054612377 8054609563 Bacteria 5170090
275 8055068684 8055066027 Bacteria 9479577
276 8055177166 8055172936 Bacteria 9305943
277 8057349119 8057345674 Bacteria 4160394
278 Ga0070670_100143399
279 Ga0070682_100018625
280 Ga0070660_100036431
281 Ga0070691_10062286
282 Ga0070659_100030400
283 Ga0070659_100199228
284 Ga0070714_100030929
285 Ga0070701_10001495
286 Ga0070700_100002680
287 Ga0070681_10032293
288 Ga0070698_100020921
289 Ga0070679_100004648
290 Ga0070684_100021783
291 Ga0070672_100016091
292 Ga0068855_100106481
293 Ga0070664_100026514
294 Ga0068856_100101731
295 Ga0070702_100027149
296 Ga0068861_100012521
297 Ga0068861_100049241
298 Ga0068870_10004805
299 Ga0068860_100001180
300 Ga0081455_10006334
301 Ga0081455_10007174
302 Ga0081455_10011144
303 Ga0081455_10014161
304 Ga0081455_10041641
305 Ga0081455_10067796
306 Ga0081539_10000170
307 Ga0081539_10000682
308 Ga0075365_10018085
309 Ga0075365_10020619
310 Ga0075365_10046817
311 Ga0075365_10049592
312 Ga0075365_10057721
313 Ga0075365_10059522
314 Ga0075365_10065852
315 Ga0075365_10123564
316 Ga0075368_10008846
317 Ga0075363_100001624
318 Ga0075363_100005455
319 Ga0075363_100015057
320 Ga0075367_10003367
321 Ga0075370_10003880
322 Ga0075370_10014839
323 Ga0075370_10037705
324 Ga0075428_100163535
325 Ga0075431_100219432
326 Ga0068865_100004169
327 Ga0105245_10052108
328 Ga0105245_10174057
329 Ga0105243_10007573
330 Ga0105243_10030084
331 Ga0105238_10098746
332 Ga0105238_10157324
333 Ga0105239_10128633
334 Ga0157372_10164221
335 Ga0157372_10172105
336 Ga0163163_10016604
337 Ga0163163_10092876
338 Ga0157377_10011946
339 Ga0206354_11465456
340 Ga0206353_11170554
341 Ga0213875_10032580
342 Ga0224712_10015863
343 Ga0207643_10005670
344 Ga0207707_10010447
345 Ga0207660_10138233
346 Ga0207657_10019609
347 Ga0207657_10075331
348 Ga0207694_10120458
349 Ga0207664_10030982
350 Ga0207690_10012467
351 Ga0207690_10137829
352 Ga0207691_10004838
353 Ga0207679_10020909
354 Ga0207640_10127077
355 Ga0207678_10057384
356 Ga0207708_10004020
357 Ga0207708_10027251
358 Ga0207702_10069481
359 Ga0207648_10001192
360 Ga0207648_10037750
361 Ga0207676_10158380
362 Ga0207674_10043936
363 Ga0207675_100012420
364 Ga0207428_10004557
365 Ga0268264_10000987
366 Ga0265340_10006963
367 Ga0307408_100040741
368 Ga0307407_10019196
369 Ga0307407_10058996
370 Ga0307412_10012017
371 Ga0307409_100070380
372 Ga0307409_100082828
373 Ga0307416_100051292
374 Ga0307415_100002830
375 Ga0373925_0000001
376 Ga0395900_0017058
377 Ga0395900_0017198
378 Ga0395900_0069154
379 Ga0395900_0103132
380 Ga0395898_0009689
381 Ga0395898_0017301
382 Ga0436364_1546886
383 Ga0395901_0006306
384 Ga0451833_0276161
385 Ga0451837_1052852
386 Ga0451853_0057221
387 Ga0451853_3021530
388 Ga0439445_0004879
389 Ga0439446_0019179
390 Ga0439434_0007913
391 Ga0466969_0043421
392 Ga0466969_0056602
393 Ga0466972_0018370
394 Ga0466972_0037395
395 Ga0466965_0007730
396 Ga0466966_0001007
397 Ga0466966_0014281
398 Ga0466966_0026977
399 Ga0466966_0057499
400 Ga0466966_0065322
401 Ga0466961_0005078
402 Ga0466961_0006966
403 Ga0466961_0028801
404 Ga0466963_0068044
405 Ga0466971_0002183
406 Ga0466970_0007151
407 Ga0466970_0008701
408 Ga0466970_0013504
409 Ga0466957_0011088
410 Ga0466960_0017066
411 Ga0466960_0066833
412 Ga0466959_0007811
413 Ga0466959_0037699
414 Ga0466967_0023415
415 Ga0466967_0073632
416 Ga0466967_0078509
417 Ga0466967_0161606
418 Ga0466967_0217286
419 Ga0495653_0037777
420 Ga0495662_0000253
421 Ga0495666_0001455
422 Ga0495665_0006386
423 Ga0495640_0010020
424 Ga0495645_0030122
425 Ga0495634_0033911
426 Ga0495635_0074159
427 Ga0495623_0008769
428 Ga0495670_0066569
429 Ga0495581_0005940
430 Ga0495604_0001196
431 Ga0495675_0014932
432 Ga0496100_0084513
433 Ga0496102_0025344
434 Ga0496102_0118102
435 Ga0496105_0004021
436 Ga0496105_0071006
437 Ga0496107_0004467
438 Ga0496108_0082588
439 Ga0496109_0039506
440 Ga0496109_0073164
441 Ga0496109_0082821
442 Ga0496110_0030022
443 Ga0496110_0093916
444 Ga0496111_0098485
445 Ga0496113_0045261
446 Ga0496114_0010799
447 Ga0496114_0091535
448 Ga0496114_0195867
449 Ga0496115_0001227
450 Ga0496117_0000216
451 Ga0496123_0006786
452 Ga0496124_0019382
453 Ga0501318_001122
454 Ga0501031_0002886
455 Ga0501032_0022106
456 Ga0501032_0050951
457 Ga0501033_0037875
458 Ga0501033_0064247
459 Ga0501034_0011971
460 Ga0501037_0030371
461 Ga0501037_0036142
462 Ga0501038_0008979
463 Ga0501039_0006825
464 Ga0501039_0045335
465 Ga0501039_0045595
466 Ga0501041_0002007
467 Ga0501042_0015522
468 Ga0501042_0024296
469 Ga0501043_0039304
470 Ga0501043_0086168
471 Ga0501046_0000184
472 Ga0501046_0102430
473 Ga0501047_0030501
474 Ga0501067_0038315
475 Ga0501070_0014863
476 Ga0501071_0018493
477 Ga0501071_0055572
478 Ga0501071_0178034
479 Ga0501072_0031891
480 Ga0501073_0107304
481 Ga0501076_0022853
482 Ga0501077_0073445
483 Ga0501079_0016088
484 Ga0501079_0075833
485 Ga0501080_0164141
486 Ga0501080_0197532
487 Ga0501035_0007374
488 Ga0501044_0010047
489 nmdc:mga03n38_3131_c1
490 nmdc:mga00v17_14491_c1
491 nmdc:mga00v17_21161_c1
492 nmdc:mga0yw44_11004_c1
493 nmdc:mga0yw44_14066_c1
494 nmdc:mga0yw44_22344_c1
495 nmdc:mga0yw44_45943_c1
496 nmdc:mga0yw44_60787_c1
497 nmdc:mga0yw44_63053_c1
498 nmdc:mga0yw44_64502_c1
499 nmdc:mga06z11_2774_c1
500 nmdc:mga04h51_1226_c1
501 nmdc:mga07m45_362_c1
502 nmdc:mga05p37_33264_c1
503 nmdc:mga08y16_99916_c1
504 Ga0495601_0003320
505 Ga0495619_0079960
506 Ga0500644_0000128
507 Ga0500556_0000417
508 Ga0500593_001815
509 Ga0500573_0024690
510 Ga0500616_0000076
511 Ga0501084_0054198
512 Ga0501084_0251183
513 Ga0501082_0132745
514 Ga0466962_0002275
515 Ga0466962_0003191
516 Ga0530510_0013846
517 Ga0530510_0176166
518 2643828135
519 2555230039
520 2587862804
521 2643893287
522 2643961654
523 2644090067
524 2644102713
525 2644118375
526 2644183217
527 2644231321
528 2644279698
529 2644319912
530 2644531224
531 2655032756
532 2676482452
533 2738871573
534 2740166649
535 2774393757
536 2799184353
537 2809195365
538 2812333966
539 2812350239
540 2855387468
541 2856743217
542 2857484885
543 2857710590
544 2891396155
545 2891558562
546 2891568696
547 2891972138
548 2974326512
549 2984579140
550 2990259966
551 8054612377
552 8055068684
553 8055177166
554 8057349119

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01018

GTP1_OBG

GTP1/OBG

3

156

0.99

PF01926

MMR_HSR1

50S ribosome-binding GTPase

159

281

0.91

PF09269

DUF1967

Domain of unknown function (DUF1967)

355

426

0.9

PF02421

FeoB_N

Ferrous iron transport protein B

158

323

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yv5-assembly1.cif.gz_A crystal structure of yjeq from aquifex aeolicus 0.8487 266 312
2rcn-assembly1.cif.gz_A crystal structure of the ribosomal interacting gtpase yjeq from the enterobacterial species salmonella typhimurium. 0.8476 266 315
7of7-assembly1.cif.gz_x structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with mterf4-nsun4 and gtpbp5 (dataset1). 0.8192 8 147
5no4-assembly1.cif.gz_Z rsga-gdpnp bound to the 30s ribosomal subunit (rsga assembly intermediate with us3) 0.813 266 316
3a1w-assembly1.cif.gz_A crystal structue of the g domain of t. maritima feob iron iransporter 0.792 153 319
ID Description Score Start End Superfamily
af_P9WMT1_364_436_3.30.300.350 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;GTP-binding protein OBG, C-terminal domain 0.9609 349 430 3.30.300.350
af_A0A1D6F3W0_673_743_3.30.300.350 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;GTP-binding protein OBG, C-terminal domain 0.9536 367 429 3.30.300.350
af_Q2FXT1_359_430_3.30.300.350 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;GTP-binding protein OBG, C-terminal domain 0.9352 349 428 3.30.300.350
af_P9WMT1_160_350_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9307 151 331 3.40.50.300
af_A0A1D6IXI9_32_94_3.30.300.350 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;GTP-binding protein OBG, C-terminal domain 0.9276 362 418 3.30.300.350
ID Description Score Start End GO Terms
AF-A0A661JLM2-F1-model_v4 GTPase ObgE 0.8829 147 326 GO:0003924
GO:0005525
AF-A0A348W308-F1-model_v4 deleted 0.8799 176 320
AF-A0A800H9P2-F1-model_v4 GTPase ObgE 0.8755 6 149 GO:0003924
GO:0005525
GO:0042254
AF-A0A6P0VT17-F1-model_v4 GTPase ObgE 0.8707 6 159 GO:0003924
GO:0005525
GO:0042254
AF-A0A3C1D7S0-F1-model_v4 GTPase ObgE 0.8699 3 163 GO:0003924
GO:0005525
GO:0042254

Map