F381893

General Info

Members Datasets Scaffolds Average Seq Length
277 142 554 289

Family's Representative Sequence

Representative Sequence 3300035724|Ga0373933_0336912|Ga0373933_0336912_43_936
Length 297
Sequence VTIREEFDITDWHGPFDPQTRVRAQAALEHGRLLYFPRMPFKLSNSEMEFLDGRLTDGKAKNISLDHTSGKIQGTSATGERAERLAAMIERFGADATGFVKDLLPNYSTVERARTSYRPVEVEGRPYSVIQDDRLLHVDAFPSRPMKNGRRILRFFANVAPQKPNGGGGARHWEVGEPFADFAAKFAPQIRPHFPGKSWAYEKFRVTRGRRSAYDEMMLSLHDAAKRDARYQKTAPHTALDFPPGCCWLVYTDQVLHAALKGEFALEQTFHFDVARMGEPDTAPIKVLERLTGKTLA

Samples

Sample ID Description Type Environment
1 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
97 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
105 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
136 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
137 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
138 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.53
Nodule 0
Rhizoplane 0.36
Rhizosphere 95.31
Stem 0
Stem Tuber 0
Unclassified 14.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373933_0336912 3300035724 Bacteria 979
2 Ga0070658_10003357 3300005327 Bacteria 13201
3 Ga0070658_10016993 3300005327 Bacteria 5822
4 Ga0070658_10212826 3300005327 Bacteria 1633
5 Ga0070683_100041641 3300005329 Bacteria 4227
6 Ga0068869_100491574 3300005334 Bacteria 1023
7 Ga0070666_10063630 3300005335 Bacteria 2501
8 Ga0070666_10320989 3300005335 Bacteria 1105
9 Ga0070680_100054657 3300005336 Bacteria 3261
10 Ga0068868_100040211 3300005338 Bacteria 3638
11 Ga0070660_100020479 3300005339 Bacteria 4861
12 Ga0070675_100164926 3300005354 Bacteria 1908
13 Ga0070671_100086576 3300005355 Bacteria 2622
14 Ga0070674_100275570 3300005356 Bacteria 1331
15 Ga0070688_100046639 3300005365 Bacteria 2684
16 Ga0070714_100293698 3300005435 Bacteria 1513
17 Ga0070713_100209224 3300005436 Bacteria 1765
18 Ga0070681_10196195 3300005458 Bacteria 1938
19 Ga0070681_10217988 3300005458 Unclassified 1824
20 Ga0070681_10257782 3300005458 Unclassified 1656
21 Ga0068867_100044259 3300005459 Bacteria 3261
22 Ga0070679_100071515 3300005530 Bacteria 3460
23 Ga0070679_100090306 3300005530 Bacteria 3051
24 Ga0070679_100274066 3300005530 Bacteria 1641
25 Ga0070684_100051833 3300005535 Bacteria 3566
26 Ga0070684_100387632 3300005535 Bacteria 1287
27 Ga0068853_100275298 3300005539 Bacteria 1551
28 Ga0070665_100000707 3300005548 Bacteria 44382
29 Ga0070665_100039916 3300005548 Bacteria 4719
30 Ga0070665_100048173 3300005548 Bacteria 4279
31 Ga0070665_100055533 3300005548 Bacteria 3971
32 Ga0070665_100108330 3300005548 Unclassified 2781
33 Ga0070665_100640383 3300005548 Unclassified 1076
34 Ga0068855_100015637 3300005563 Bacteria 9131
35 Ga0068855_100177672 3300005563 Bacteria 2408
36 Ga0068855_100274481 3300005563 Bacteria 1874
37 Ga0070664_100074204 3300005564 Bacteria 2920
38 Ga0068857_100172402 3300005577 Unclassified 1967
39 Ga0068857_100315287 3300005577 Bacteria 1443
40 Ga0068854_100156905 3300005578 Bacteria 1759
41 Ga0068856_100031784 3300005614 Bacteria 5165
42 Ga0068852_100225663 3300005616 Bacteria 1783
43 Ga0068864_100108824 3300005618 Bacteria 2466
44 Ga0068864_100579641 3300005618 Unclassified 1087
45 Ga0068858_100129702 3300005842 Bacteria 2363
46 Ga0068858_100148519 3300005842 Bacteria 2202
47 Ga0068860_100150136 3300005843 Unclassified 2244
48 Ga0070715_10149308 3300006163 Unclassified 1143
49 Ga0097621_100002608 3300006237 Bacteria 12358
50 Ga0097621_100038473 3300006237 Bacteria 3839
51 Ga0097621_100099167 3300006237 Bacteria 2448
52 Ga0097621_100111016 3300006237 Bacteria 2317
53 Ga0097621_100116063 3300006237 Unclassified 2266
54 Ga0068871_100000610 3300006358 Bacteria 24579
55 Ga0068871_100005205 3300006358 Bacteria 9093
56 Ga0068871_100078766 3300006358 Bacteria 2725
57 Ga0068871_100111066 3300006358 Bacteria 2306
58 Ga0068865_100028079 3300006881 Bacteria 3723
59 Ga0105240_10012428 3300009093 Bacteria 11755
60 Ga0105240_10014473 3300009093 Bacteria 10772
61 Ga0105240_10026547 3300009093 Bacteria 7598
62 Ga0105240_10028504 3300009093 Bacteria 7293
63 Ga0105240_10043522 3300009093 Bacteria 5712
64 Ga0105240_10360077 3300009093 Bacteria 1648
65 Ga0105240_10391867 3300009093 Unclassified 1566
66 Ga0105240_10814422 3300009093 Bacteria 1011
67 Ga0105240_10841910 3300009093 Unclassified 991
68 Ga0105245_10045912 3300009098 Bacteria 3902
69 Ga0105243_10036401 3300009148 Bacteria 3821
70 Ga0105241_10073860 3300009174 Bacteria 2654
71 Ga0105241_10096636 3300009174 Bacteria 2340
72 Ga0105241_10121177 3300009174 Bacteria 2106
73 Ga0105241_10167917 3300009174 Bacteria 1810
74 Ga0105241_10195108 3300009174 Bacteria 1688
75 Ga0105241_10210173 3300009174 Bacteria 1630
76 Ga0105242_10022503 3300009176 Bacteria 4958
77 Ga0105242_10065511 3300009176 Bacteria 2997
78 Ga0105242_10075142 3300009176 Bacteria 2812
79 Ga0105242_10160321 3300009176 Unclassified 1968
80 Ga0105248_10017313 3300009177 Bacteria 7942
81 Ga0105248_10199085 3300009177 Bacteria 2257
82 Ga0105237_10042623 3300009545 Bacteria 4576
83 Ga0105237_10052628 3300009545 Bacteria 4086
84 Ga0105237_10099646 3300009545 Bacteria 2897
85 Ga0105237_10199917 3300009545 Bacteria 1998
86 Ga0105237_10422224 3300009545 Unclassified 1339
87 Ga0105238_10046896 3300009551 Bacteria 4358
88 Ga0105238_10071239 3300009551 Bacteria 3473
89 Ga0105238_10075582 3300009551 Bacteria 3360
90 Ga0105238_10116174 3300009551 Bacteria 2655
91 Ga0105238_10117428 3300009551 Bacteria 2641
92 Ga0105238_10475288 3300009551 Bacteria 1249
93 Ga0105249_10058799 3300009553 Bacteria 3524
94 Ga0105249_10290122 3300009553 Bacteria 1637
95 Ga0105239_10023500 3300010375 Bacteria 6789
96 Ga0105239_10123310 3300010375 Bacteria 2879
97 Ga0105239_10188599 3300010375 Bacteria 2308
98 Ga0105239_10393172 3300010375 Bacteria 1568
99 Ga0105239_10467082 3300010375 Bacteria 1432
100 Ga0105239_10649292 3300010375 Unclassified 1205
101 Ga0105239_10770948 3300010375 Unclassified 1101
102 Ga0157370_10009312 3300013104 Bacteria 10517
103 Ga0157374_10147062 3300013296 Bacteria 2289
104 Ga0157374_10200528 3300013296 Bacteria 1954
105 Ga0157374_10597807 3300013296 Bacteria 1113
106 Ga0157378_10071215 3300013297 Bacteria 3122
107 Ga0157378_10345714 3300013297 Bacteria 1452
108 Ga0157378_10413096 3300013297 Bacteria 1332
109 Ga0163162_10014849 3300013306 Bacteria 7605
110 Ga0163162_10073078 3300013306 Bacteria 3485
111 Ga0163162_10244864 3300013306 Bacteria 1924
112 Ga0157375_10163458 3300013308 Bacteria 2370
113 Ga0157375_10189639 3300013308 Unclassified 2210
114 Ga0163163_10000016 3300014325 Bacteria 213966
115 Ga0163163_10099898 3300014325 Bacteria 2923
116 Ga0157379_10002781 3300014968 Bacteria 14750
117 Ga0157379_10056031 3300014968 Bacteria 3523
118 Ga0157379_10084977 3300014968 Bacteria 2836
119 Ga0157376_10014998 3300014969 Bacteria 5841
120 Ga0157376_10522007 3300014969 Unclassified 1171
121 Ga0163161_10034533 3300017792 Bacteria 3618
122 Ga0213876_10005787 3300021384 Bacteria 6770
123 Ga0207697_10145890 3300025315 Bacteria 1028
124 Ga0207680_10053461 3300025903 Bacteria 2425
125 Ga0207680_10248436 3300025903 Bacteria 1228
126 Ga0207647_10255397 3300025904 Bacteria 1004
127 Ga0207699_10045391 3300025906 Bacteria 2565
128 Ga0207705_10005859 3300025909 Bacteria 9147
129 Ga0207705_10138285 3300025909 Bacteria 1817
130 Ga0207705_10156321 3300025909 Bacteria 1711
131 Ga0207705_10229179 3300025909 Unclassified 1413
132 Ga0207654_10064324 3300025911 Bacteria 2156
133 Ga0207654_10074832 3300025911 Bacteria 2022
134 Ga0207707_10204363 3300025912 Bacteria 1722
135 Ga0207707_10235146 3300025912 Bacteria 1594
136 Ga0207707_10444699 3300025912 Unclassified 1109
137 Ga0207707_10551567 3300025912 Unclassified 979
138 Ga0207695_10015190 3300025913 Bacteria 9079
139 Ga0207695_10022227 3300025913 Bacteria 7212
140 Ga0207695_10025117 3300025913 Bacteria 6682
141 Ga0207695_10149314 3300025913 Bacteria 2277
142 Ga0207695_10618295 3300025913 Unclassified 964
143 Ga0207671_10081563 3300025914 Bacteria 2426
144 Ga0207671_10118250 3300025914 Bacteria 2024
145 Ga0207671_10219342 3300025914 Bacteria 1490
146 Ga0207693_10037185 3300025915 Bacteria 3837
147 Ga0207657_10002111 3300025919 Bacteria 21491
148 Ga0207657_10030561 3300025919 Bacteria 4888
149 Ga0207652_10196199 3300025921 Bacteria 1816
150 Ga0207694_10011251 3300025924 Bacteria 6758
151 Ga0207694_10068250 3300025924 Unclassified 2776
152 Ga0207694_10090546 3300025924 Bacteria 2414
153 Ga0207650_10175817 3300025925 Unclassified 1704
154 Ga0207650_10322860 3300025925 Bacteria 1265
155 Ga0207687_10096196 3300025927 Unclassified 2170
156 Ga0207686_10030676 3300025934 Bacteria 3186
157 Ga0207686_10060616 3300025934 Bacteria 2396
158 Ga0207669_10140887 3300025937 Unclassified 1674
159 Ga0207704_10088816 3300025938 Unclassified 2023
160 Ga0207711_10002955 3300025941 Bacteria 14865
161 Ga0207689_10028297 3300025942 Bacteria 4690
162 Ga0207689_10260431 3300025942 Bacteria 1435
163 Ga0207667_10032619 3300025949 Bacteria 5609
164 Ga0207667_10067644 3300025949 Unclassified 3721
165 Ga0207651_10056947 3300025960 Bacteria 2693
166 Ga0207712_10141606 3300025961 Bacteria 1846
167 Ga0207712_10456926 3300025961 Bacteria 1084
168 Ga0207640_10168034 3300025981 Unclassified 1631
169 Ga0207640_10317314 3300025981 Unclassified 1239
170 Ga0207658_10304383 3300025986 Bacteria 1374
171 Ga0207703_10022988 3300026035 Bacteria 4895
172 Ga0207702_10516001 3300026078 Unclassified 1166
173 Ga0207648_10004543 3300026089 Bacteria 14230
174 Ga0207648_10006141 3300026089 Bacteria 11973
175 Ga0207648_10469063 3300026089 Bacteria 1148
176 Ga0207676_10520598 3300026095 Unclassified 1132
177 Ga0207674_10032944 3300026116 Bacteria 5430
178 Ga0207683_10097755 3300026121 Bacteria 2619
179 Ga0207683_10268509 3300026121 Bacteria 1558
180 Ga0207698_10089585 3300026142 Unclassified 2513
181 Ga0207698_10195566 3300026142 Bacteria 1806
182 Ga0268266_10001112 3300028379 Bacteria 33635
183 Ga0268266_10018159 3300028379 Bacteria 5996
184 Ga0268266_10511298 3300028379 Bacteria 1147
185 Ga0265318_10000703 3300028577 Bacteria 22479
186 Ga0265330_10043475 3300031235 Unclassified 1987
187 Ga0265325_10003338 3300031241 Bacteria 10544
188 Ga0265340_10014349 3300031247 Bacteria 4142
189 Ga0265340_10084263 3300031247 Bacteria 1493
190 Ga0265339_10021006 3300031249 Bacteria 3807
191 Ga0265339_10025254 3300031249 Bacteria 3412
192 Ga0265331_10024757 3300031250 Bacteria 3033
193 Ga0265331_10029237 3300031250 Bacteria 2752
194 Ga0265316_10025037 3300031344 Bacteria 4986
195 Ga0265313_10004156 3300031595 Bacteria 11249
196 Ga0265313_10009901 3300031595 Bacteria 6124
197 Ga0265313_10014656 3300031595 Bacteria 4618
198 Ga0265342_10085352 3300031712 Bacteria 1817
199 Ga0307516_10026322 3300031730 Bacteria 5909
200 Ga0395899_0127301 3300037312 Bacteria 1821
201 Ga0395900_0026223 3300037418 Bacteria 5968
202 Ga0395900_0071010 3300037418 Bacteria 3579
203 Ga0395898_0009023 3300037466 Bacteria 10498
204 Ga0395898_0058719 3300037466 Bacteria 3744
205 Ga0436365_1599398 3300039437 Bacteria 6456
206 Ga0466967_0502156 3300045976 Bacteria 1190
207 Ga0495606_0036620 3300046507 Bacteria 3340
208 Ga0495630_0519557 3300046517 Unclassified 913
209 Ga0495654_0061811 3300046530 Bacteria 1797
210 Ga0495609_0009143 3300046538 Bacteria 4808
211 Ga0495622_0003303 3300046557 Bacteria 7625
212 Ga0495611_0031317 3300046648 Bacteria 2341
213 Ga0495625_0062780 3300046660 Bacteria 2625
214 Ga0495604_0341016 3300047317 Bacteria 998
215 Ga0496104_0650641 3300048907 Unclassified 963
216 Ga0496121_0000447 3300048924 Bacteria 81300
217 Ga0496126_0171841 3300048929 Bacteria 1846
218 Ga0501033_0004264 3300049570 Bacteria 11494
219 Ga0501033_0035394 3300049570 Bacteria 3743
220 Ga0501033_0067882 3300049570 Bacteria 2622
221 Ga0501033_0126089 3300049570 Bacteria 1856
222 Ga0501033_0205291 3300049570 Bacteria 1406
223 Ga0501033_0236906 3300049570 Bacteria 1295
224 Ga0501033_0309918 3300049570 Bacteria 1110
225 Ga0501034_0008365 3300049571 Bacteria 10941
226 Ga0501034_0127911 3300049571 Bacteria 2525
227 Ga0501036_0084889 3300049572 Bacteria 2676
228 Ga0501036_0443107 3300049572 Bacteria 1082
229 Ga0501037_0013315 3300049573 Bacteria 6062
230 Ga0501037_0042867 3300049573 Bacteria 3325
231 Ga0501037_0084968 3300049573 Unclassified 2291
232 Ga0501038_0035999 3300049574 Bacteria 4344
233 Ga0501038_0140126 3300049574 Bacteria 1979
234 Ga0501038_0164621 3300049574 Unclassified 1800
235 Ga0501039_0002486 3300049575 Bacteria 13718
236 Ga0501042_0084504 3300049578 Bacteria 2276
237 Ga0501043_0005629 3300049579 Bacteria 10088
238 Ga0501043_0089848 3300049579 Bacteria 2414
239 Ga0501043_0130882 3300049579 Bacteria 1966
240 Ga0501043_0151802 3300049579 Bacteria 1813
241 Ga0501046_0001006 3300049580 Bacteria 27557
242 Ga0501047_0004409 3300049581 Bacteria 13253
243 Ga0501047_0011879 3300049581 Bacteria 8239
244 Ga0501047_0015604 3300049581 Bacteria 7239
245 Ga0501047_0028760 3300049581 Bacteria 5360
246 Ga0501047_0039742 3300049581 Bacteria 4550
247 Ga0501047_0132455 3300049581 Bacteria 2373
248 Ga0501047_0171697 3300049581 Bacteria 2037
249 Ga0501047_0435339 3300049581 Bacteria 1142
250 Ga0501048_0001871 3300049582 Bacteria 15968
251 Ga0501068_0054629 3300049584 Bacteria 2419
252 Ga0501069_0008980 3300049585 Bacteria 5274
253 Ga0501070_0013408 3300049586 Bacteria 6912
254 Ga0501072_0007886 3300049588 Bacteria 8084
255 Ga0501073_0023284 3300049589 Bacteria 4449
256 Ga0501074_0002288 3300049590 Bacteria 13324
257 Ga0501079_0005040 3300049741 Bacteria 9804
258 Ga0501080_0077752 3300049742 Bacteria 3086
259 Ga0501080_0403430 3300049742 Bacteria 1230
260 Ga0501083_0009251 3300049744 Bacteria 6955
261 Ga0501035_0017758 3300049822 Bacteria 6562
262 Ga0501035_0045455 3300049822 Bacteria 3951
263 Ga0501035_0077393 3300049822 Bacteria 2939
264 Ga0501044_0007087 3300049823 Bacteria 12338
265 Ga0501044_0337955 3300049823 Bacteria 1427
266 Ga0501044_0659327 3300049823 Bacteria 935
267 Ga0500643_000008 3300053087 Bacteria 457931
268 Ga0500646_0022890 3300053090 Bacteria 1673
269 Ga0500595_003043 3300053119 Bacteria 7967
270 Ga0500595_027023 3300053119 Unclassified 1970
271 Ga0500559_0053433 3300053136 Unclassified 1788
272 Ga0500573_0000051 3300053140 Bacteria 95469
273 Ga0500639_081925 3300053163 Bacteria 1624
274 Ga0501084_0120249 3300054114 Bacteria 2208
275 Ga0501082_0004961 3300060353 Bacteria 11612
276 Ga0501082_0053944 3300060353 Bacteria 3465
277 Ga0501082_0262369 3300060353 Bacteria 1503
278 Ga0373933_0336912
279 Ga0070658_10003357
280 Ga0070658_10016993
281 Ga0070658_10212826
282 Ga0070683_100041641
283 Ga0068869_100491574
284 Ga0070666_10063630
285 Ga0070666_10320989
286 Ga0070680_100054657
287 Ga0068868_100040211
288 Ga0070660_100020479
289 Ga0070675_100164926
290 Ga0070671_100086576
291 Ga0070674_100275570
292 Ga0070688_100046639
293 Ga0070714_100293698
294 Ga0070713_100209224
295 Ga0070681_10196195
296 Ga0070681_10217988
297 Ga0070681_10257782
298 Ga0068867_100044259
299 Ga0070679_100071515
300 Ga0070679_100090306
301 Ga0070679_100274066
302 Ga0070684_100051833
303 Ga0070684_100387632
304 Ga0068853_100275298
305 Ga0070665_100000707
306 Ga0070665_100039916
307 Ga0070665_100048173
308 Ga0070665_100055533
309 Ga0070665_100108330
310 Ga0070665_100640383
311 Ga0068855_100015637
312 Ga0068855_100177672
313 Ga0068855_100274481
314 Ga0070664_100074204
315 Ga0068857_100172402
316 Ga0068857_100315287
317 Ga0068854_100156905
318 Ga0068856_100031784
319 Ga0068852_100225663
320 Ga0068864_100108824
321 Ga0068864_100579641
322 Ga0068858_100129702
323 Ga0068858_100148519
324 Ga0068860_100150136
325 Ga0070715_10149308
326 Ga0097621_100002608
327 Ga0097621_100038473
328 Ga0097621_100099167
329 Ga0097621_100111016
330 Ga0097621_100116063
331 Ga0068871_100000610
332 Ga0068871_100005205
333 Ga0068871_100078766
334 Ga0068871_100111066
335 Ga0068865_100028079
336 Ga0105240_10012428
337 Ga0105240_10014473
338 Ga0105240_10026547
339 Ga0105240_10028504
340 Ga0105240_10043522
341 Ga0105240_10360077
342 Ga0105240_10391867
343 Ga0105240_10814422
344 Ga0105240_10841910
345 Ga0105245_10045912
346 Ga0105243_10036401
347 Ga0105241_10073860
348 Ga0105241_10096636
349 Ga0105241_10121177
350 Ga0105241_10167917
351 Ga0105241_10195108
352 Ga0105241_10210173
353 Ga0105242_10022503
354 Ga0105242_10065511
355 Ga0105242_10075142
356 Ga0105242_10160321
357 Ga0105248_10017313
358 Ga0105248_10199085
359 Ga0105237_10042623
360 Ga0105237_10052628
361 Ga0105237_10099646
362 Ga0105237_10199917
363 Ga0105237_10422224
364 Ga0105238_10046896
365 Ga0105238_10071239
366 Ga0105238_10075582
367 Ga0105238_10116174
368 Ga0105238_10117428
369 Ga0105238_10475288
370 Ga0105249_10058799
371 Ga0105249_10290122
372 Ga0105239_10023500
373 Ga0105239_10123310
374 Ga0105239_10188599
375 Ga0105239_10393172
376 Ga0105239_10467082
377 Ga0105239_10649292
378 Ga0105239_10770948
379 Ga0157370_10009312
380 Ga0157374_10147062
381 Ga0157374_10200528
382 Ga0157374_10597807
383 Ga0157378_10071215
384 Ga0157378_10345714
385 Ga0157378_10413096
386 Ga0163162_10014849
387 Ga0163162_10073078
388 Ga0163162_10244864
389 Ga0157375_10163458
390 Ga0157375_10189639
391 Ga0163163_10000016
392 Ga0163163_10099898
393 Ga0157379_10002781
394 Ga0157379_10056031
395 Ga0157379_10084977
396 Ga0157376_10014998
397 Ga0157376_10522007
398 Ga0163161_10034533
399 Ga0213876_10005787
400 Ga0207697_10145890
401 Ga0207680_10053461
402 Ga0207680_10248436
403 Ga0207647_10255397
404 Ga0207699_10045391
405 Ga0207705_10005859
406 Ga0207705_10138285
407 Ga0207705_10156321
408 Ga0207705_10229179
409 Ga0207654_10064324
410 Ga0207654_10074832
411 Ga0207707_10204363
412 Ga0207707_10235146
413 Ga0207707_10444699
414 Ga0207707_10551567
415 Ga0207695_10015190
416 Ga0207695_10022227
417 Ga0207695_10025117
418 Ga0207695_10149314
419 Ga0207695_10618295
420 Ga0207671_10081563
421 Ga0207671_10118250
422 Ga0207671_10219342
423 Ga0207693_10037185
424 Ga0207657_10002111
425 Ga0207657_10030561
426 Ga0207652_10196199
427 Ga0207694_10011251
428 Ga0207694_10068250
429 Ga0207694_10090546
430 Ga0207650_10175817
431 Ga0207650_10322860
432 Ga0207687_10096196
433 Ga0207686_10030676
434 Ga0207686_10060616
435 Ga0207669_10140887
436 Ga0207704_10088816
437 Ga0207711_10002955
438 Ga0207689_10028297
439 Ga0207689_10260431
440 Ga0207667_10032619
441 Ga0207667_10067644
442 Ga0207651_10056947
443 Ga0207712_10141606
444 Ga0207712_10456926
445 Ga0207640_10168034
446 Ga0207640_10317314
447 Ga0207658_10304383
448 Ga0207703_10022988
449 Ga0207702_10516001
450 Ga0207648_10004543
451 Ga0207648_10006141
452 Ga0207648_10469063
453 Ga0207676_10520598
454 Ga0207674_10032944
455 Ga0207683_10097755
456 Ga0207683_10268509
457 Ga0207698_10089585
458 Ga0207698_10195566
459 Ga0268266_10001112
460 Ga0268266_10018159
461 Ga0268266_10511298
462 Ga0265318_10000703
463 Ga0265330_10043475
464 Ga0265325_10003338
465 Ga0265340_10014349
466 Ga0265340_10084263
467 Ga0265339_10021006
468 Ga0265339_10025254
469 Ga0265331_10024757
470 Ga0265331_10029237
471 Ga0265316_10025037
472 Ga0265313_10004156
473 Ga0265313_10009901
474 Ga0265313_10014656
475 Ga0265342_10085352
476 Ga0307516_10026322
477 Ga0395899_0127301
478 Ga0395900_0026223
479 Ga0395900_0071010
480 Ga0395898_0009023
481 Ga0395898_0058719
482 Ga0436365_1599398
483 Ga0466967_0502156
484 Ga0495606_0036620
485 Ga0495630_0519557
486 Ga0495654_0061811
487 Ga0495609_0009143
488 Ga0495622_0003303
489 Ga0495611_0031317
490 Ga0495625_0062780
491 Ga0495604_0341016
492 Ga0496104_0650641
493 Ga0496121_0000447
494 Ga0496126_0171841
495 Ga0501033_0004264
496 Ga0501033_0035394
497 Ga0501033_0067882
498 Ga0501033_0126089
499 Ga0501033_0205291
500 Ga0501033_0236906
501 Ga0501033_0309918
502 Ga0501034_0008365
503 Ga0501034_0127911
504 Ga0501036_0084889
505 Ga0501036_0443107
506 Ga0501037_0013315
507 Ga0501037_0042867
508 Ga0501037_0084968
509 Ga0501038_0035999
510 Ga0501038_0140126
511 Ga0501038_0164621
512 Ga0501039_0002486
513 Ga0501042_0084504
514 Ga0501043_0005629
515 Ga0501043_0089848
516 Ga0501043_0130882
517 Ga0501043_0151802
518 Ga0501046_0001006
519 Ga0501047_0004409
520 Ga0501047_0011879
521 Ga0501047_0015604
522 Ga0501047_0028760
523 Ga0501047_0039742
524 Ga0501047_0132455
525 Ga0501047_0171697
526 Ga0501047_0435339
527 Ga0501048_0001871
528 Ga0501068_0054629
529 Ga0501069_0008980
530 Ga0501070_0013408
531 Ga0501072_0007886
532 Ga0501073_0023284
533 Ga0501074_0002288
534 Ga0501079_0005040
535 Ga0501080_0077752
536 Ga0501080_0403430
537 Ga0501083_0009251
538 Ga0501035_0017758
539 Ga0501035_0045455
540 Ga0501035_0077393
541 Ga0501044_0007087
542 Ga0501044_0337955
543 Ga0501044_0659327
544 Ga0500643_000008
545 Ga0500646_0022890
546 Ga0500595_003043
547 Ga0500595_027023
548 Ga0500559_0053433
549 Ga0500573_0000051
550 Ga0500639_081925
551 Ga0501084_0120249
552 Ga0501082_0004961
553 Ga0501082_0053944
554 Ga0501082_0262369

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11004

Kdo_hydroxy

3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase

17

296

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yka-assembly1.cif.gz_A crystal structure of the kdo hydroxylase kdoo, a non-heme fe(ii) alphaketoglutarate dependent dioxygenase in complex with cobalt(ii) 0.944 2 287
5yvz-assembly1.cif.gz_A crystal structure of the kdo hydroxylase kdoo, a non-heme fe(ii) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and fe(iii) 0.9417 2 288
5yw0-assembly1.cif.gz_A crystal structure of the kdo hydroxylase kdoo, a non-heme fe(ii) alphaketoglutarate dependent dioxygenase in complex with succinate and fe(iii) 0.9397 2 287
6a2e-assembly1.cif.gz_A apo structure of the kdo hydroxylase kdoo, a non-heme fe(ii) alphaketoglutarate dependent dioxygenase 0.9395 2 287
5yka-assembly1.cif.gz_A crystal structure of the kdo hydroxylase kdoo, a non-heme fe(ii) alphaketoglutarate dependent dioxygenase in complex with cobalt(ii) 0.9345 2 287
ID Description Score Start End Superfamily
3gbfA02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.578 112 260 2.60.120.10
af_Q9VJ97_9_301_2.60.120.650 Mainly Beta;Sandwich;Jelly Rolls;Cupin 0.5399 111 261 2.60.120.650
af_Q54K96_70_313_2.60.120.650 Mainly Beta;Sandwich;Jelly Rolls;Cupin 0.5291 85 262 2.60.120.650
af_P9WI91_4_259_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.5227 15 261 2.60.120.620
5fljL00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.5204 111 268 2.60.120.10
ID Description Score Start End GO Terms
AF-G2JAV8-F1-model_v4 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 0.9715 151 288
AF-A0A5C7VEE7-F1-model_v4 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 0.9669 151 288
AF-A0A1Q3J3G1-F1-model_v4 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 0.9665 37 288
AF-A0A371WT57-F1-model_v4 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 0.9597 2 288
AF-A0A1Q3J3G1-F1-model_v4 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 0.959 37 288

Map