F381877

General Info

Members Datasets Scaffolds Average Seq Length
277 182 223 455

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10067987|Ga0307414_100679871
Length 492
Sequence LRRRPAACSVSSNRPSAPLARPALRGPIRRTPLTFQPSLPPQPLSPLDGRYRSAVTGLADFLSEAGLNRARVEVEVEWLIALTDRSLFETSPLSDADKERLRALYRNFGQAEIDWLAEKEAVTQHDVKAIEYLVRDRLSTLGLDAIAELTHFACTSEDINSASYALTVKRAVEEVWLPALDTVIAKLRELAVEHADAAMLSRTHGQPATPSTMGKELAVFAWRLERVRGQIAASDYLAKFSGATGTWSAHLAADPDVNWPEVAREYIEDLGLGFNILTTQIESHDWQVELYDRVRHAGGILHNLATDIWTYISLGYFAQIPVAGATGSSTMPHKINPIRFENAEANLELSAALLGSLSQTLVTSRLQRDLTDSTTQRNIGVAFGHSLLALDNLRRGLNEISLARDVLLADLDVNWEVLAEAIQTVIRAEVVAGRSTISDPYALLKELTRGHRVGAAELASFVEGLEIGDAAKQRLLALTPATYIGIAERLAK

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221566 Microbacterium sp. Root166 Isolate Unclassified
3 2643221575 Microbacterium sp. Root61 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221619 Agromyces sp. Root81 Isolate Unclassified
6 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
7 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
8 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
9 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
10 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
11 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
12 2773857759 Microbacterium sp. 1294 Isolate Unclassified
13 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
14 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
15 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
16 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
17 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
18 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
19 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
20 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
21 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
22 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
23 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
24 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
25 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
26 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
27 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
28 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
29 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
30 2919069694 Microbacterium sp. 1154 Isolate Unclassified
31 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
32 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
33 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
34 2928153084 Leifsonia sp. 563 Isolate Unclassified
35 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
36 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
37 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
38 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
39 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
40 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
41 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
42 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
43 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
44 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
45 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
46 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
47 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
48 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
49 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
50 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
51 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
52 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
53 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
54 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
55 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
56 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
57 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
58 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
59 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
60 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
61 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
62 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
63 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
64 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
67 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
68 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
69 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
70 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
71 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
72 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
73 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
79 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
91 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
94 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
96 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
104 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
165 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
166 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
167 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
168 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
169 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
170 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
174 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
177 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
178 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
179 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
180 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
181 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
182 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.7
Metatranscriptomes 1.81
Isolates 19.49

Biome Distribution

Category Percentage (%)
Aerial Root 0.72
Bulb 0
Endosphere 21.66
Nodule 0
Rhizoplane 6.14
Rhizosphere 42.24
Stem 0
Stem Tuber 0.36
Unclassified 28.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020584 3300001979 Bacteria 2299
2 JGI24737J22298_10020779 3300001990 Bacteria 2094
3 JGI24735J21928_10003469 3300002067 Bacteria 5370
4 JGI25164J39214_1000853 3300002772 Bacteria 10460
5 JGI25165J46597_1000005 3300003214 Bacteria 623702
6 Ga0006562J51391_1085494 3300003578 Bacteria 7878
7 Ga0006562J51391_1085495 3300003578 Bacteria 4148
8 Ga0006562J51391_1201759 3300003578 Bacteria 2142
9 Ga0006562J51391_1201760 3300003578 Bacteria 2110
10 Ga0055539_1000014 3300003752 Bacteria 381086
11 Ga0055533_1000002 3300003756 Bacteria 1196393
12 Ga0055525_1000421 3300003759 Bacteria 25425
13 Ga0055527_1000004 3300003760 Bacteria 570634
14 Ga0055542_1000019 3300003762 Bacteria 341174
15 Ga0055529_1000008 3300003763 Bacteria 394786
16 Ga0055530_10000647 3300003791 Bacteria 29932
17 Ga0055531_10002191 3300003794 Bacteria 13313
18 Ga0055531_10003082 3300003794 Bacteria 10778
19 Ga0065165_1000552 3300005262 Bacteria 56291
20 Ga0070658_10000065 3300005327 Bacteria 104621
21 Ga0070710_10020995 3300005437 Bacteria 3397
22 Ga0068855_100070656 3300005563 Bacteria 4061
23 Ga0075365_10002879 3300006038 Bacteria 8662
24 Ga0075365_10071978 3300006038 Bacteria 2328
25 Ga0075368_10016413 3300006042 Bacteria 2760
26 Ga0075364_10004818 3300006051 Bacteria 7812
27 Ga0075364_10007470 3300006051 Bacteria 6493
28 Ga0075364_10023881 3300006051 Bacteria 3874
29 Ga0075367_10000216 3300006178 Bacteria 19221
30 Ga0075369_10000141 3300006186 Bacteria 19971
31 Ga0075369_10004051 3300006186 Bacteria 5383
32 Ga0075366_10016162 3300006195 Bacteria 4286
33 Ga0075370_10005857 3300006353 Bacteria 6143
34 Ga0105244_10017958 3300009036 Bacteria 3982
35 Ga0105243_10002622 3300009148 Bacteria 14960
36 Ga0105237_10055543 3300009545 Bacteria 3965
37 Ga0105239_10390833 3300010375 Bacteria 1573
38 Ga0157370_10111203 3300013104 Bacteria 2561
39 Ga0157369_10070625 3300013105 Bacteria 3751
40 Ga0157369_10075972 3300013105 Bacteria 3601
41 Ga0157369_10191149 3300013105 Bacteria 2151
42 Ga0171462_1002 3300013250 Bacteria 1052134
43 Ga0157372_10135802 3300013307 Bacteria 2832
44 Ga0197907_10407506 3300020069 Bacteria 1837
45 Ga0209566_100056 3300025225 Bacteria 209595
46 Ga0209674_100001 3300025226 Bacteria 4013750
47 Ga0209672_100011 3300025228 Bacteria 856297
48 Ga0209147_101954 3300025229 Bacteria 6086
49 Ga0209563_100001 3300025230 Bacteria 4013775
50 Ga0207427_100024 3300025231 Bacteria 438403
51 Ga0209437_100243 3300025233 Bacteria 88712
52 Ga0209258_101144 3300025242 Bacteria 10900
53 Ga0209646_1000030 3300025246 Bacteria 384216
54 Ga0209677_100001 3300025253 Bacteria 4013787
55 Ga0209677_100271 3300025253 Bacteria 34642
56 Ga0209148_1000023 3300025254 Bacteria 680511
57 Ga0209233_1000001 3300025261 Bacteria 2992747
58 Ga0209455_1000023 3300025272 Bacteria 680449
59 Ga0209455_1003248 3300025272 Bacteria 5859
60 Ga0209758_1007327 3300025297 Bacteria 7557
61 Ga0209050_1000101 3300025298 Bacteria 230076
62 Ga0209257_1000220 3300025304 Bacteria 135116
63 Ga0207655_1036883 3300025728 Bacteria 2161
64 Ga0207647_10017560 3300025904 Bacteria 4863
65 Ga0207705_10000001 3300025909 Bacteria 2061880
66 Ga0207709_10001563 3300025935 Bacteria 15694
67 Ga0207678_10025082 3300026067 Bacteria 5206
68 Ga0209813_10001611 3300027866 Bacteria 5084
69 Ga0307515_10044613 3300028794 Bacteria 6842
70 Ga0265338_10011059 3300028800 Bacteria 10471
71 Ga0307406_10000027 3300031901 Bacteria 91856
72 Ga0307416_100132829 3300032002 Bacteria 2245
73 Ga0307414_10067987 3300032004 Bacteria 2555
74 Ga0395899_0008741 3300037312 Bacteria 7795
75 Ga0395899_0035153 3300037312 Bacteria 3762
76 Ga0395900_0001470 3300037418 Bacteria 28112
77 Ga0395898_0000355 3300037466 Bacteria 101003
78 Ga0466972_0020153 3300044658 Bacteria 3332
79 Ga0466965_0000004 3300044683 Bacteria 229348
80 Ga0466966_0015831 3300044684 Bacteria 4983
81 Ga0466970_0000082 3300044765 Bacteria 38992
82 Ga0466970_0035230 3300044765 Bacteria 2652
83 Ga0466970_0041185 3300044765 Bacteria 2454
84 Ga0466957_0019765 3300044842 Bacteria 3964
85 Ga0466957_0032230 3300044842 Bacteria 3137
86 Ga0466957_0081559 3300044842 Bacteria 2015
87 Ga0466960_0051245 3300044901 Bacteria 1993
88 Ga0466959_0053685 3300045049 Bacteria 2945
89 Ga0466958_0024031 3300045836 Bacteria 3583
90 Ga0466958_0083488 3300045836 Bacteria 1969
91 Ga0495645_0004865 3300046543 Bacteria 9181
92 Ga0496100_0077763 3300048903 Bacteria 2231
93 Ga0496101_0015420 3300048904 Bacteria 5150
94 Ga0496101_0021310 3300048904 Bacteria 4452
95 Ga0496102_0083304 3300048905 Bacteria 2951
96 Ga0496103_0014158 3300048906 Bacteria 4734
97 Ga0496105_0034324 3300048908 Bacteria 4171
98 Ga0496106_0206842 3300048909 Bacteria 1563
99 Ga0496107_0015986 3300048910 Bacteria 5265
100 Ga0496107_0064802 3300048910 Bacteria 2649
101 Ga0496109_0049164 3300048912 Bacteria 3838
102 Ga0496109_0108726 3300048912 Bacteria 2577
103 Ga0496111_0010453 3300048914 Bacteria 6228
104 Ga0496112_0018469 3300048915 Bacteria 6567
105 Ga0496113_0069551 3300048916 Bacteria 2674
106 Ga0496113_0070404 3300048916 Bacteria 2659
107 Ga0496115_0038538 3300048918 Bacteria 3792
108 Ga0496115_0103506 3300048918 Bacteria 2335
109 Ga0496116_0065031 3300048919 Bacteria 2341
110 Ga0496117_0000014 3300048920 Bacteria 584427
111 Ga0496117_0000964 3300048920 Bacteria 44066
112 Ga0496117_0001084 3300048920 Bacteria 41243
113 Ga0496117_0001956 3300048920 Bacteria 27420
114 Ga0496117_0071231 3300048920 Bacteria 2330
115 Ga0496117_0082839 3300048920 Bacteria 2099
116 Ga0496118_0003428 3300048921 Bacteria 20002
117 Ga0496118_0007615 3300048921 Bacteria 11408
118 Ga0496118_0023160 3300048921 Bacteria 5404
119 Ga0496118_0056491 3300048921 Bacteria 2950
120 Ga0496119_0000989 3300048922 Bacteria 36539
121 Ga0496119_0001425 3300048922 Bacteria 28914
122 Ga0496119_0006616 3300048922 Bacteria 10670
123 Ga0496119_0041822 3300048922 Bacteria 2913
124 Ga0496119_0044644 3300048922 Bacteria 2787
125 Ga0496119_0093167 3300048922 Bacteria 1707
126 Ga0496120_0000284 3300048923 Bacteria 85391
127 Ga0496120_0006048 3300048923 Bacteria 9404
128 Ga0496120_0013574 3300048923 Bacteria 5474
129 Ga0496120_0015890 3300048923 Bacteria 4943
130 Ga0496120_0065018 3300048923 Bacteria 2023
131 Ga0496121_0049298 3300048924 Bacteria 3572
132 Ga0496122_0000071 3300048925 Bacteria 222537
133 Ga0496122_0000235 3300048925 Bacteria 124769
134 Ga0496122_0014607 3300048925 Bacteria 7579
135 Ga0496122_0048124 3300048925 Bacteria 3283
136 Ga0496123_0000006 3300048926 Bacteria 647258
137 Ga0496123_0000036 3300048926 Bacteria 265722
138 Ga0496123_0002841 3300048926 Bacteria 20475
139 Ga0496124_0006427 3300048927 Bacteria 12812
140 Ga0496124_0007880 3300048927 Bacteria 11220
141 Ga0496124_0045016 3300048927 Bacteria 3784
142 Ga0496125_0000192 3300048928 Bacteria 130383
143 Ga0496125_0008135 3300048928 Bacteria 11040
144 Ga0496125_0008341 3300048928 Bacteria 10870
145 Ga0496125_0087051 3300048928 Bacteria 2360
146 Ga0496125_0132392 3300048928 Bacteria 1752
147 Ga0496126_0001804 3300048929 Bacteria 31365
148 Ga0496126_0002769 3300048929 Bacteria 23107
149 Ga0496126_0006452 3300048929 Bacteria 13068
150 Ga0496126_0013087 3300048929 Bacteria 8465
151 Ga0496126_0060417 3300048929 Bacteria 3408
152 Ga0496126_0079412 3300048929 Bacteria 2904
153 Ga0496126_0092052 3300048929 Bacteria 2665
154 Ga0501031_0018794 3300049568 Bacteria 4499
155 Ga0501031_0098204 3300049568 Bacteria 1911
156 Ga0501032_0005975 3300049569 Bacteria 8985
157 Ga0501032_0009280 3300049569 Bacteria 7128
158 Ga0501032_0014624 3300049569 Bacteria 5559
159 Ga0501032_0089747 3300049569 Bacteria 2040
160 Ga0501033_0001662 3300049570 Bacteria 19465
161 Ga0501033_0007647 3300049570 Bacteria 8399
162 Ga0501033_0055056 3300049570 Bacteria 2941
163 Ga0501034_0001664 3300049571 Bacteria 28624
164 Ga0501034_0003826 3300049571 Bacteria 16960
165 Ga0501034_0016782 3300049571 Bacteria 7508
166 Ga0501034_0022765 3300049571 Bacteria 6382
167 Ga0501034_0026026 3300049571 Bacteria 5959
168 Ga0501034_0045204 3300049571 Bacteria 4450
169 Ga0501034_0065888 3300049571 Bacteria 3636
170 Ga0501036_0003208 3300049572 Bacteria 13052
171 Ga0501036_0016182 3300049572 Bacteria 6228
172 Ga0501036_0176311 3300049572 Bacteria 1800
173 Ga0501037_0007551 3300049573 Bacteria 7961
174 Ga0501037_0054128 3300049573 Bacteria 2935
175 Ga0501038_0002760 3300049574 Bacteria 16354
176 Ga0501038_0004529 3300049574 Bacteria 12938
177 Ga0501038_0004642 3300049574 Bacteria 12787
178 Ga0501038_0027760 3300049574 Bacteria 5031
179 Ga0501038_0029936 3300049574 Bacteria 4820
180 Ga0501038_0037466 3300049574 Bacteria 4251
181 Ga0501039_0115332 3300049575 Bacteria 2102
182 Ga0501039_0200643 3300049575 Bacteria 1568
183 Ga0501042_0119743 3300049578 Bacteria 1895
184 Ga0501043_0094249 3300049579 Bacteria 2354
185 Ga0501046_0020554 3300049580 Bacteria 5457
186 Ga0501047_0004738 3300049581 Bacteria 12791
187 Ga0501047_0173879 3300049581 Bacteria 2022
188 Ga0501048_0002150 3300049582 Bacteria 15032
189 Ga0501048_0004283 3300049582 Bacteria 10874
190 Ga0501068_0037201 3300049584 Bacteria 2914
191 Ga0501070_0000407 3300049586 Bacteria 39131
192 Ga0501070_0002133 3300049586 Bacteria 17366
193 Ga0501070_0015686 3300049586 Bacteria 6370
194 Ga0501070_0020804 3300049586 Bacteria 5504
195 Ga0501070_0025123 3300049586 Bacteria 4995
196 Ga0501073_0000063 3300049589 Bacteria 66508
197 Ga0501080_0178676 3300049742 Bacteria 1954
198 Ga0501035_0022368 3300049822 Bacteria 5805
199 Ga0501035_0146733 3300049822 Bacteria 2048
200 Ga0501044_0020321 3300049823 Bacteria 7088
201 Ga0501044_0027078 3300049823 Bacteria 6065
202 Ga0501045_0026242 3300049824 Bacteria 4189
203 Ga0501045_0032076 3300049824 Bacteria 3806
204 nmdc:mga00v17_2377_c1 3300050491 Bacteria 9634
205 nmdc:mga00v17_30759_c1 3300050491 Bacteria 3160
206 nmdc:mga00v17_63065_c1 3300050491 Bacteria 2282
207 nmdc:mga0yw44_60045_c1 3300050492 Bacteria 2328
208 nmdc:mga0yw44_93677_c1 3300050492 Bacteria 1903
209 nmdc:mga0yw44_994_c1 3300050492 Bacteria 10822
210 nmdc:mga0k408_10208_c1 3300050493 Bacteria 5077
211 nmdc:mga04h51_690_c1 3300050495 Bacteria 7864
212 nmdc:mga07m45_45811_c1 3300050496 Bacteria 2456
213 nmdc:mga07m45_705_c2 3300050496 Bacteria 4226
214 nmdc:mga0sz30_11151_c1 3300050516 Bacteria 3462
215 nmdc:mga0sz30_140_c1 3300050516 Bacteria 26858
216 Ga0500593_000794 3300053117 Bacteria 11807
217 Ga0500559_0000534 3300053136 Bacteria 26496
218 Ga0500559_0001023 3300053136 Bacteria 17163
219 Ga0500559_0002050 3300053136 Bacteria 10788
220 Ga0500568_0000099 3300053139 Bacteria 80197
221 Ga0500573_0010185 3300053140 Bacteria 5241
222 Ga0500577_0012259 3300053142 Bacteria 2584
223 Ga0501084_0218073 3300054114 Bacteria 1610

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044765 Ga0466970_0041185 Ga0466970_0041185_415_1617 400
2 3300044901 Ga0466960_0051245 Ga0466960_0051245_110_1312 400
3 iso_pu_bacteria 2728369380 2730231265 413
4 iso_pu_bacteria 2747842429 2747952637 413
5 iso_pu_bacteria 2852646457 2852649121 413
6 iso_pu_bacteria 2946033335 2946035757 413
7 iso_pu_bacteria 8004182704 8004183886 413
8 iso_pu_bacteria 8004212874 8004212924 415
9 3300025246 Ga0209646_1000030 Ga0209646_1000030108 417
10 3300049571 Ga0501034_0001664 Ga0501034_0001664_9428_10681 417
11 3300049574 Ga0501038_0002760 Ga0501038_0002760_5913_7166 417
12 3300006038 Ga0075365_10002879 Ga0075365_100028798 419
13 3300006042 Ga0075368_10016413 Ga0075368_100164133 419
14 3300006178 Ga0075367_10000216 Ga0075367_100002166 419
15 3300006186 Ga0075369_10000141 Ga0075369_1000014118 419
16 3300006195 Ga0075366_10016162 Ga0075366_100161623 419
17 3300006353 Ga0075370_10005857 Ga0075370_100058575 419
18 3300027866 Ga0209813_10001611 Ga0209813_100016116 419
19 3300050493 nmdc:mga0k408_10208_c1 nmdc:mga0k408_10208_c1_2820_4079 419
20 3300050495 nmdc:mga04h51_690_c1 nmdc:mga04h51_690_c1_5214_6473 419
21 3300050496 nmdc:mga07m45_705_c2 nmdc:mga07m45_705_c2_2360_3619 419
22 3300050516 nmdc:mga0sz30_140_c1 nmdc:mga0sz30_140_c1_14492_15751 419
23 3300046543 Ga0495645_0004865 Ga0495645_0004865_7728_9107 427
24 3300006051 Ga0075364_10004818 Ga0075364_100048187 438
25 3300048920 Ga0496117_0001084 Ga0496117_0001084_7727_9043 438
26 3300048921 Ga0496118_0023160 Ga0496118_0023160_2840_4156 438
27 3300048928 Ga0496125_0008135 Ga0496125_0008135_8078_9394 438
28 3300048929 Ga0496126_0001804 Ga0496126_0001804_24504_25820 438
29 3300050491 nmdc:mga00v17_30759_c1 nmdc:mga00v17_30759_c1_113_1429 438
30 3300003578 Ga0006562J51391_1085494 Ga0006562J51391_10854945 440
31 3300003578 Ga0006562J51391_1085495 Ga0006562J51391_10854952 440
32 3300048909 Ga0496106_0206842 Ga0496106_0206842_16_1338 440
33 iso_pu_bacteria 2945968032 2945969539 445
34 3300053136 Ga0500559_0002050 Ga0500559_0002050_4783_6168 446
35 3300013104 Ga0157370_10111203 Ga0157370_101112032 447
36 3300048920 Ga0496117_0000964 Ga0496117_0000964_30058_31416 451
37 3300048921 Ga0496118_0007615 Ga0496118_0007615_4375_5733 451
38 3300048922 Ga0496119_0001425 Ga0496119_0001425_13481_14839 451
39 3300048923 Ga0496120_0015890 Ga0496120_0015890_2611_3969 451
40 3300048925 Ga0496122_0000235 Ga0496122_0000235_33429_34787 451
41 3300048926 Ga0496123_0000036 Ga0496123_0000036_89987_91345 451
42 3300048927 Ga0496124_0007880 Ga0496124_0007880_5900_7258 451
43 3300048929 Ga0496126_0079412 Ga0496126_0079412_55_1413 451
44 3300048922 Ga0496119_0041822 Ga0496119_0041822_377_1735 452
45 iso_pu_bacteria 2643221575 2643887596 453
46 iso_pu_bacteria 2643221635 2644197563 454
47 iso_pu_bacteria 2966924647 2966926935 454
48 iso_pu_bacteria 2585428157 2588107476 455
49 iso_pu_bacteria 2643221619 2644112851 455
50 iso_pu_bacteria 2643221632 2644181858 455
51 iso_pu_bacteria 2757320536 2758225416 455
52 iso_pu_bacteria 2773857758 2774379543 455
53 iso_pu_bacteria 2773857759 2774382348 455
54 iso_pu_bacteria 2773857763 2774397527 455
55 iso_pu_bacteria 2808606306 2808629332 455
56 iso_pu_bacteria 2808606447 2809225911 455
57 iso_pu_bacteria 2821268502 2821271780 455
58 iso_pu_bacteria 2833709550 2833712830 455
59 iso_pu_bacteria 2844841374 2844844287 455
60 iso_pu_bacteria 2852632344 2852635190 455
61 iso_pu_bacteria 2857720070 2857721784 455
62 iso_pu_bacteria 2870628048 2870628757 455
63 iso_pu_bacteria 2884763398 2884767331 455
64 iso_pu_bacteria 2904509784 2904512928 455
65 iso_pu_bacteria 2906799679 2906802826 455
66 iso_pu_bacteria 2908678064 2908679437 455
67 iso_pu_bacteria 2919055335 2919056254 455
68 iso_pu_bacteria 2919069694 2919070073 455
69 iso_pu_bacteria 2919523602 2919526256 455
70 iso_pu_bacteria 2928090899 2928093577 455
71 iso_pu_bacteria 2928121344 2928122697 455
72 iso_pu_bacteria 2928153084 2928154383 455
73 iso_pu_bacteria 2974294766 2974295588 455
74 iso_pu_bacteria 2974324384 2974324609 455
75 iso_pu_bacteria 2977228692 2977229624 455
76 iso_pu_bacteria 2977236895 2977238325 455
77 iso_pu_bacteria 2977251589 2977252538 455
78 iso_pu_bacteria 2977264416 2977264897 455
79 iso_pu_bacteria 2984542743 2984543893 455
80 iso_pu_bacteria 2984580707 2984582744 455
81 iso_pu_bacteria 2995726249 2995726335 455
82 iso_pu_bacteria 8016254467 8016255830 455
83 iso_pu_bacteria 8045830549 8045833125 455
84 iso_pu_bacteria 8055034563 8055037744 455
85 iso_pu_bacteria 8055037949 8055039912 455
86 3300053140 Ga0500573_0010185 Ga0500573_0010185_1368_2747 456
87 3300032004 Ga0307414_10067987 Ga0307414_100679871 457
88 3300044765 Ga0466970_0000082 Ga0466970_0000082_20844_22220 457
89 3300044842 Ga0466957_0032230 Ga0466957_0032230_56_1432 457
90 iso_pu_bacteria 2946041624 2946041931 457
91 3300045836 Ga0466958_0083488 Ga0466958_0083488_132_1529 458
92 iso_pu_bacteria 2808606368 2808884244 458
93 iso_pu_bacteria 2811994872 2812325147 458
94 3300001979 JGI24740J21852_10020584 JGI24740J21852_100205843 459
95 3300001990 JGI24737J22298_10020779 JGI24737J22298_100207791 459
96 3300002067 JGI24735J21928_10003469 JGI24735J21928_100034694 459
97 3300002772 JGI25164J39214_1000853 JGI25164J39214_10008537 459
98 3300003214 JGI25165J46597_1000005 JGI25165J46597_1000005394 459
99 3300003578 Ga0006562J51391_1201759 Ga0006562J51391_12017591 459
100 3300003578 Ga0006562J51391_1201760 Ga0006562J51391_12017602 459
101 3300003752 Ga0055539_1000014 Ga0055539_100001444 459
102 3300003756 Ga0055533_1000002 Ga0055533_1000002831 459
103 3300003759 Ga0055525_1000421 Ga0055525_100042116 459
104 3300003760 Ga0055527_1000004 Ga0055527_1000004348 459
105 3300003762 Ga0055542_1000019 Ga0055542_1000019136 459
106 3300003763 Ga0055529_1000008 Ga0055529_1000008229 459
107 3300003791 Ga0055530_10000647 Ga0055530_100006479 459
108 3300003794 Ga0055531_10002191 Ga0055531_100021912 459
109 3300003794 Ga0055531_10003082 Ga0055531_100030829 459
110 3300005262 Ga0065165_1000552 Ga0065165_100055244 459
111 3300005327 Ga0070658_10000065 Ga0070658_100000658 459
112 3300005437 Ga0070710_10020995 Ga0070710_100209954 459
113 3300005563 Ga0068855_100070656 Ga0068855_1000706565 459
114 3300006038 Ga0075365_10071978 Ga0075365_100719782 459
115 3300006051 Ga0075364_10007470 Ga0075364_100074704 459
116 3300006051 Ga0075364_10023881 Ga0075364_100238812 459
117 3300006186 Ga0075369_10004051 Ga0075369_100040515 459
118 3300009036 Ga0105244_10017958 Ga0105244_100179584 459
119 3300009148 Ga0105243_10002622 Ga0105243_1000262212 459
120 3300009545 Ga0105237_10055543 Ga0105237_100555434 459
121 3300010375 Ga0105239_10390833 Ga0105239_103908332 459
122 3300013105 Ga0157369_10070625 Ga0157369_100706253 459
123 3300013105 Ga0157369_10075972 Ga0157369_100759722 459
124 3300013105 Ga0157369_10191149 Ga0157369_101911492 459
125 3300013250 Ga0171462_1002 Ga0171462_1002126 459
126 3300013307 Ga0157372_10135802 Ga0157372_101358022 459
127 3300020069 Ga0197907_10407506 Ga0197907_104075061 459
128 3300025225 Ga0209566_100056 Ga0209566_100056181 459
129 3300025226 Ga0209674_100001 Ga0209674_1000012735 459
130 3300025228 Ga0209672_100011 Ga0209672_100011348 459
131 3300025229 Ga0209147_101954 Ga0209147_1019547 459
132 3300025230 Ga0209563_100001 Ga0209563_1000012735 459
133 3300025231 Ga0207427_100024 Ga0207427_100024212 459
134 3300025233 Ga0209437_100243 Ga0209437_10024334 459
135 3300025242 Ga0209258_101144 Ga0209258_1011442 459
136 3300025253 Ga0209677_100001 Ga0209677_1000012735 459
137 3300025253 Ga0209677_100271 Ga0209677_1002714 459
138 3300025254 Ga0209148_1000023 Ga0209148_1000023186 459
139 3300025261 Ga0209233_1000001 Ga0209233_1000001255 459
140 3300025272 Ga0209455_1000023 Ga0209455_1000023186 459
141 3300025272 Ga0209455_1003248 Ga0209455_10032486 459
142 3300025297 Ga0209758_1007327 Ga0209758_10073274 459
143 3300025298 Ga0209050_1000101 Ga0209050_1000101174 459
144 3300025304 Ga0209257_1000220 Ga0209257_100022022 459
145 3300025728 Ga0207655_1036883 Ga0207655_10368832 459
146 3300025904 Ga0207647_10017560 Ga0207647_100175603 459
147 3300025909 Ga0207705_10000001 Ga0207705_100000011003 459
148 3300025935 Ga0207709_10001563 Ga0207709_1000156310 459
149 3300026067 Ga0207678_10025082 Ga0207678_100250826 459
150 3300028794 Ga0307515_10044613 Ga0307515_100446135 459
151 3300028800 Ga0265338_10011059 Ga0265338_100110595 459
152 3300031901 Ga0307406_10000027 Ga0307406_1000002755 459
153 3300032002 Ga0307416_100132829 Ga0307416_1001328291 459
154 3300037312 Ga0395899_0008741 Ga0395899_0008741_4287_5666 459
155 3300037312 Ga0395899_0035153 Ga0395899_0035153_537_1916 459
156 3300037418 Ga0395900_0001470 Ga0395900_0001470_3416_4795 459
157 3300037466 Ga0395898_0000355 Ga0395898_0000355_35646_37025 459
158 3300044658 Ga0466972_0020153 Ga0466972_0020153_1769_3148 459
159 3300044683 Ga0466965_0000004 Ga0466965_0000004_157379_158761 459
160 3300044684 Ga0466966_0015831 Ga0466966_0015831_3214_4593 459
161 3300044765 Ga0466970_0035230 Ga0466970_0035230_491_1876 459
162 3300044842 Ga0466957_0019765 Ga0466957_0019765_1558_2937 459
163 3300044842 Ga0466957_0081559 Ga0466957_0081559_363_1748 459
164 3300045049 Ga0466959_0053685 Ga0466959_0053685_1070_2449 459
165 3300045836 Ga0466958_0024031 Ga0466958_0024031_529_1908 459
166 3300048903 Ga0496100_0077763 Ga0496100_0077763_680_2059 459
167 3300048904 Ga0496101_0015420 Ga0496101_0015420_678_2057 459
168 3300048904 Ga0496101_0021310 Ga0496101_0021310_1683_3062 459
169 3300048905 Ga0496102_0083304 Ga0496102_0083304_268_1647 459
170 3300048906 Ga0496103_0014158 Ga0496103_0014158_2499_3878 459
171 3300048908 Ga0496105_0034324 Ga0496105_0034324_979_2358 459
172 3300048910 Ga0496107_0015986 Ga0496107_0015986_574_1953 459
173 3300048910 Ga0496107_0064802 Ga0496107_0064802_533_1912 459
174 3300048912 Ga0496109_0049164 Ga0496109_0049164_1026_2405 459
175 3300048912 Ga0496109_0108726 Ga0496109_0108726_197_1576 459
176 3300048914 Ga0496111_0010453 Ga0496111_0010453_895_2274 459
177 3300048915 Ga0496112_0018469 Ga0496112_0018469_3766_5145 459
178 3300048916 Ga0496113_0069551 Ga0496113_0069551_292_1671 459
179 3300048916 Ga0496113_0070404 Ga0496113_0070404_1136_2515 459
180 3300048918 Ga0496115_0038538 Ga0496115_0038538_559_1938 459
181 3300048918 Ga0496115_0103506 Ga0496115_0103506_260_1639 459
182 3300048919 Ga0496116_0065031 Ga0496116_0065031_835_2214 459
183 3300048920 Ga0496117_0000014 Ga0496117_0000014_335419_336798 459
184 3300048920 Ga0496117_0001956 Ga0496117_0001956_8944_10323 459
185 3300048920 Ga0496117_0071231 Ga0496117_0071231_270_1649 459
186 3300048920 Ga0496117_0082839 Ga0496117_0082839_584_1963 459
187 3300048921 Ga0496118_0003428 Ga0496118_0003428_7128_8507 459
188 3300048921 Ga0496118_0056491 Ga0496118_0056491_34_1413 459
189 3300048922 Ga0496119_0000989 Ga0496119_0000989_28450_29829 459
190 3300048922 Ga0496119_0006616 Ga0496119_0006616_3519_4901 459
191 3300048922 Ga0496119_0044644 Ga0496119_0044644_52_1431 459
192 3300048922 Ga0496119_0093167 Ga0496119_0093167_112_1491 459
193 3300048923 Ga0496120_0000284 Ga0496120_0000284_7172_8551 459
194 3300048923 Ga0496120_0006048 Ga0496120_0006048_7744_9123 459
195 3300048923 Ga0496120_0013574 Ga0496120_0013574_2045_3424 459
196 3300048923 Ga0496120_0065018 Ga0496120_0065018_29_1408 459
197 3300048924 Ga0496121_0049298 Ga0496121_0049298_651_2030 459
198 3300048925 Ga0496122_0000071 Ga0496122_0000071_38669_40048 459
199 3300048925 Ga0496122_0014607 Ga0496122_0014607_89_1468 459
200 3300048925 Ga0496122_0048124 Ga0496122_0048124_1025_2404 459
201 3300048926 Ga0496123_0000006 Ga0496123_0000006_463393_464772 459
202 3300048926 Ga0496123_0002841 Ga0496123_0002841_10545_11924 459
203 3300048927 Ga0496124_0006427 Ga0496124_0006427_10722_12101 459
204 3300048927 Ga0496124_0045016 Ga0496124_0045016_662_2044 459
205 3300048928 Ga0496125_0000192 Ga0496125_0000192_1342_2733 459
206 3300048928 Ga0496125_0008341 Ga0496125_0008341_6386_7765 459
207 3300048928 Ga0496125_0087051 Ga0496125_0087051_950_2329 459
208 3300048928 Ga0496125_0132392 Ga0496125_0132392_35_1414 459
209 3300048929 Ga0496126_0002769 Ga0496126_0002769_19496_20878 459
210 3300048929 Ga0496126_0006452 Ga0496126_0006452_2125_3504 459
211 3300048929 Ga0496126_0013087 Ga0496126_0013087_613_1995 459
212 3300048929 Ga0496126_0060417 Ga0496126_0060417_240_1619 459
213 3300048929 Ga0496126_0092052 Ga0496126_0092052_707_2086 459
214 3300049568 Ga0501031_0018794 Ga0501031_0018794_1050_2435 459
215 3300049568 Ga0501031_0098204 Ga0501031_0098204_419_1810 459
216 3300049569 Ga0501032_0005975 Ga0501032_0005975_3050_4435 459
217 3300049569 Ga0501032_0009280 Ga0501032_0009280_3670_5052 459
218 3300049569 Ga0501032_0014624 Ga0501032_0014624_2372_3754 459
219 3300049569 Ga0501032_0089747 Ga0501032_0089747_114_1496 459
220 3300049570 Ga0501033_0001662 Ga0501033_0001662_14650_16035 459
221 3300049570 Ga0501033_0007647 Ga0501033_0007647_3690_5072 459
222 3300049570 Ga0501033_0055056 Ga0501033_0055056_1333_2715 459
223 3300049571 Ga0501034_0003826 Ga0501034_0003826_4469_5854 459
224 3300049571 Ga0501034_0016782 Ga0501034_0016782_3411_4793 459
225 3300049571 Ga0501034_0022765 Ga0501034_0022765_1097_2479 459
226 3300049571 Ga0501034_0026026 Ga0501034_0026026_3126_4508 459
227 3300049571 Ga0501034_0045204 Ga0501034_0045204_1247_2629 459
228 3300049571 Ga0501034_0065888 Ga0501034_0065888_1971_3350 459
229 3300049572 Ga0501036_0003208 Ga0501036_0003208_8258_9643 459
230 3300049572 Ga0501036_0016182 Ga0501036_0016182_4695_6083 459
231 3300049572 Ga0501036_0176311 Ga0501036_0176311_38_1420 459
232 3300049573 Ga0501037_0007551 Ga0501037_0007551_3072_4460 459
233 3300049573 Ga0501037_0054128 Ga0501037_0054128_546_1925 459
234 3300049574 Ga0501038_0004529 Ga0501038_0004529_3296_4681 459
235 3300049574 Ga0501038_0004642 Ga0501038_0004642_5863_7245 459
236 3300049574 Ga0501038_0027760 Ga0501038_0027760_2682_4064 459
237 3300049574 Ga0501038_0029936 Ga0501038_0029936_2148_3530 459
238 3300049574 Ga0501038_0037466 Ga0501038_0037466_2590_3978 459
239 3300049575 Ga0501039_0115332 Ga0501039_0115332_454_1839 459
240 3300049575 Ga0501039_0200643 Ga0501039_0200643_60_1442 459
241 3300049578 Ga0501042_0119743 Ga0501042_0119743_202_1587 459
242 3300049579 Ga0501043_0094249 Ga0501043_0094249_322_1701 459
243 3300049580 Ga0501046_0020554 Ga0501046_0020554_3022_4407 459
244 3300049581 Ga0501047_0004738 Ga0501047_0004738_10356_11741 459
245 3300049581 Ga0501047_0173879 Ga0501047_0173879_583_1962 459
246 3300049582 Ga0501048_0002150 Ga0501048_0002150_2086_3474 459
247 3300049582 Ga0501048_0004283 Ga0501048_0004283_8537_9922 459
248 3300049584 Ga0501068_0037201 Ga0501068_0037201_1045_2427 459
249 3300049586 Ga0501070_0000407 Ga0501070_0000407_30577_31956 459
250 3300049586 Ga0501070_0002133 Ga0501070_0002133_4598_5989 459
251 3300049586 Ga0501070_0015686 Ga0501070_0015686_593_1975 459
252 3300049586 Ga0501070_0020804 Ga0501070_0020804_500_1882 459
253 3300049586 Ga0501070_0025123 Ga0501070_0025123_3402_4784 459
254 3300049589 Ga0501073_0000063 Ga0501073_0000063_27414_28805 459
255 3300049742 Ga0501080_0178676 Ga0501080_0178676_113_1504 459
256 3300049822 Ga0501035_0022368 Ga0501035_0022368_3498_4883 459
257 3300049822 Ga0501035_0146733 Ga0501035_0146733_210_1616 459
258 3300049823 Ga0501044_0020321 Ga0501044_0020321_1279_2664 459
259 3300049823 Ga0501044_0027078 Ga0501044_0027078_2151_3530 459
260 3300049824 Ga0501045_0026242 Ga0501045_0026242_1055_2443 459
261 3300049824 Ga0501045_0032076 Ga0501045_0032076_632_2038 459
262 3300050491 nmdc:mga00v17_2377_c1 nmdc:mga00v17_2377_c1_6531_7919 459
263 3300050491 nmdc:mga00v17_63065_c1 nmdc:mga00v17_63065_c1_430_1815 459
264 3300050492 nmdc:mga0yw44_60045_c1 nmdc:mga0yw44_60045_c1_290_1678 459
265 3300050492 nmdc:mga0yw44_93677_c1 nmdc:mga0yw44_93677_c1_103_1488 459
266 3300050492 nmdc:mga0yw44_994_c1 nmdc:mga0yw44_994_c1_619_2007 459
267 3300050496 nmdc:mga07m45_45811_c1 nmdc:mga07m45_45811_c1_270_1685 459
268 3300050516 nmdc:mga0sz30_11151_c1 nmdc:mga0sz30_11151_c1_1165_2550 459
269 3300053117 Ga0500593_000794 Ga0500593_000794_1650_3038 459
270 3300053136 Ga0500559_0000534 Ga0500559_0000534_6983_8371 459
271 3300053136 Ga0500559_0001023 Ga0500559_0001023_11059_12444 459
272 3300053139 Ga0500568_0000099 Ga0500568_0000099_59933_61315 459
273 3300053142 Ga0500577_0012259 Ga0500577_0012259_1179_2567 459
274 3300054114 Ga0501084_0218073 Ga0501084_0218073_28_1434 459
275 iso_pu_bacteria 2643221566 2643847320 459
276 iso_pu_bacteria 2643221597 2643997290 459
277 iso_pu_bacteria 8002811521 8002813134 459

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08328

ASL_C

Adenylosuccinate lyase C-terminal

364

484

0.99

PF00206

Lyase_1

Lyase

49

349

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ptr-assembly1.cif.gz_B-2 crystal structure of escherichia coli adenylosuccinate lyase mutant h171a with bound adenylosuccinate substrate 0.9519 8 457
3gzh-assembly1.cif.gz_A crystal structure of phosphate-bound adenylosuccinate lyase from e. coli 0.9507 8 459
2ptq-assembly1.cif.gz_A crystal structure of escherichia coli adenylosuccinate lyase mutant h171n with bound amp and fumarate 0.9506 8 457
2ptr-assembly1.cif.gz_A-2 crystal structure of escherichia coli adenylosuccinate lyase mutant h171a with bound adenylosuccinate substrate 0.9445 8 457
4nsl-assembly1.cif.gz_C x-ray crystal structure of adenylosuccinate lyase from salmonella typhimurium 0.9368 8 458
ID Description Score Start End Superfamily
af_Q8RY94_455_518_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9579 380 448 1.20.200.10
af_Q8GUN7_446_509_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9476 380 448 1.20.200.10
af_Q8RY94_455_518_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9291 380 448 1.20.200.10
4efcB02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9258 116 379 1.20.200.10
af_Q8GUN7_446_509_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9194 380 448 1.20.200.10
ID Description Score Start End GO Terms
AF-A0A7G3D8S3-F1-model_v4 deleted 0.9694 67 204
AF-A0A2G9P700-F1-model_v4 Adenylosuccinate lyase 0.9621 8 457 GO:0004018
GO:0006188
AF-A0A1F6R4S4-F1-model_v4 Adenylosuccinate lyase (ASL) (EC 4.3.2.2) (Adenylosuccinase) 0.9614 8 459 GO:0004018
GO:0006189
GO:0044208
GO:0070626
AF-A0A7Y9MWN5-F1-model_v4 Adenylosuccinate lyase (EC 4.3.2.2) 0.9597 93 456 GO:0004018
GO:0006188
GO:0070626
AF-A0A6N8UH19-F1-model_v4 Adenylosuccinate lyase (EC 4.3.2.2) 0.9587 8 458 GO:0004018
GO:0006188
GO:0070626

Feature Viewer

pLDDT pTM Quality
89.53 0.89 High
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Predicted Structure (AlphaFold2)

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