F381816

General Info

Members Datasets Scaffolds Average Seq Length
277 199 554 540

Family's Representative Sequence

Representative Sequence 3300025915|Ga0207693_10073311|Ga0207693_100733113
Length 604
Sequence MRLANLQNGTAASTLHSTVISFAHSKMPLGEDLPTAMRKPFLLLTAVFVATIISIAQAQPQSPKPGESKTMAAITGGAGAPTKEASFNGTSWWNYVKVLAADNMEGRETGSAGLRRAQEFVVEQLKRAGLEPVGSASYYQPVRLESRQIVEKESSAALLRDGKVEPLTLGDDVIFNTRIDLAPEVEAPLVFVGYGLTVPEKNYDDLAGLDVKGKVVVILSGSPAEIPGALASHYQTPAERWKALQKAGVIGVISIPNPASMDVPWSRIALNRTHPSMDLADPVFNETAGEKVSMLMNPAKADVLFAGTGHTFNELAALGKDRKPLPHFPLNVSIRSKAKLEKKDVDSANIIAKLPGSDPALKNGYVVLSAHIDHIGIGEPINGDRIYNGAMDNASGSAVLLDVAANLKRSPEKLKRSLLFVFVTGEEKGLLGSKYFTQYPTVDPKSMVADINIDMFLPIIPLKTLVVFGLAESDLGDLATQVAEARGVHVEADPEPQRNIFIRSDQYNFIRHGVPALAMGVAPDPNSPEQKKIFKDWLTNRYHAPSDDLAQPIDFSAAAQYEEIIRGLMLKVANDPQRPEWKADSFFRRYATSQLTSKNGTASP

Samples

Sample ID Description Type Environment
1 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
117 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
118 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
123 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
135 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
136 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
137 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
138 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
168 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
188 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
189 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 2643221584 Caulobacter sp. Root656 Isolate Unclassified
193 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
194 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
195 2849560528 Caulobacter zeae 410 Isolate Unclassified
196 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
197 2851153111 Caulobacter radicis 736 Isolate Unclassified
198 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
199 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.03
Metatranscriptomes 1.08
Isolates 2.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.44
Nodule 0
Rhizoplane 6.5
Rhizosphere 89.53
Stem 0
Stem Tuber 0
Unclassified 9.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207693_10073311 3300025915 Bacteria 2680
2 JGI24034J26672_10002259 3300002239 Bacteria 2633
3 JGI24751J29686_10002674 3300002459 Bacteria 3589
4 rootL2_10040315 3300003322 Bacteria 5712
5 Ga0065707_10134161 3300005295 Bacteria 1869
6 Ga0070676_10001567 3300005328 Bacteria 11606
7 Ga0070683_100005434 3300005329 Bacteria 10645
8 Ga0070683_100074592 3300005329 Unclassified 3168
9 Ga0070670_100018199 3300005331 Bacteria 6029
10 Ga0070677_10006899 3300005333 Bacteria 3774
11 Ga0068869_100004064 3300005334 Bacteria 9056
12 Ga0070666_10010526 3300005335 Bacteria 5785
13 Ga0070660_100005399 3300005339 Bacteria 8847
14 Ga0070689_100016792 3300005340 Bacteria 5364
15 Ga0070668_100011170 3300005347 Bacteria 6686
16 Ga0070668_100053886 3300005347 Bacteria 3101
17 Ga0070671_100127981 3300005355 Bacteria 2138
18 Ga0070674_100039704 3300005356 Bacteria 3180
19 Ga0070688_100003452 3300005365 Bacteria 8135
20 Ga0070659_100003722 3300005366 Bacteria 10876
21 Ga0070709_10000783 3300005434 Bacteria 17817
22 Ga0070713_100007140 3300005436 Bacteria 7811
23 Ga0070713_100007540 3300005436 Bacteria 7647
24 Ga0070713_100133488 3300005436 Bacteria 2191
25 Ga0070710_10011082 3300005437 Bacteria 4445
26 Ga0070701_10000115 3300005438 Bacteria 23160
27 Ga0070711_100007306 3300005439 Bacteria 6718
28 Ga0070711_100076561 3300005439 Bacteria 2372
29 Ga0070708_100011000 3300005445 Bacteria 7353
30 Ga0070681_10011367 3300005458 Bacteria 8807
31 Ga0068867_100012051 3300005459 Bacteria 6107
32 Ga0070685_10020041 3300005466 Bacteria 3616
33 Ga0070685_10032697 3300005466 Bacteria 2915
34 Ga0070707_100074982 3300005468 Bacteria 3263
35 Ga0070707_100175716 3300005468 Bacteria 2087
36 Ga0070698_100014298 3300005471 Bacteria 8391
37 Ga0070684_100010625 3300005535 Bacteria 7299
38 Ga0070697_100102408 3300005536 Unclassified 2379
39 Ga0068853_100032817 3300005539 Bacteria 4401
40 Ga0070665_100001279 3300005548 Bacteria 30150
41 Ga0068855_100037793 3300005563 Bacteria 5738
42 Ga0070664_100023920 3300005564 Bacteria 5048
43 Ga0068854_100028053 3300005578 Bacteria 3886
44 Ga0068856_100070562 3300005614 Bacteria 3456
45 Ga0068856_100080321 3300005614 Bacteria 3234
46 Ga0068852_100001444 3300005616 Bacteria 16025
47 Ga0068864_100090726 3300005618 Bacteria 2694
48 Ga0068870_10000743 3300005840 Bacteria 12546
49 Ga0068863_100012946 3300005841 Bacteria 8045
50 Ga0068863_100022216 3300005841 Bacteria 6058
51 Ga0068858_100102249 3300005842 Unclassified 2673
52 Ga0068860_100066511 3300005843 Bacteria 3424
53 Ga0070717_10003800 3300006028 Bacteria 10860
54 Ga0070717_10006647 3300006028 Bacteria 8524
55 Ga0070717_10046634 3300006028 Unclassified 3547
56 Ga0070717_10059061 3300006028 Bacteria 3172
57 Ga0070717_10066568 3300006028 Bacteria 2996
58 Ga0070717_10073432 3300006028 Bacteria 2859
59 Ga0070716_100000063 3300006173 Bacteria 41771
60 Ga0070716_100004247 3300006173 Bacteria 6820
61 Ga0070716_100029345 3300006173 Bacteria 2973
62 Ga0070712_100000547 3300006175 Bacteria 21740
63 Ga0070712_100018329 3300006175 Bacteria 4546
64 Ga0070712_100027558 3300006175 Bacteria 3794
65 Ga0097621_100048904 3300006237 Bacteria 3433
66 Ga0068871_100044253 3300006358 Bacteria 3579
67 Ga0075434_100015069 3300006871 Bacteria 7402
68 Ga0075434_100031052 3300006871 Bacteria 5265
69 Ga0075434_100036851 3300006871 Unclassified 4838
70 Ga0105245_10000856 3300009098 Bacteria 27593
71 Ga0105245_10017241 3300009098 Bacteria 6301
72 Ga0105245_10092010 3300009098 Bacteria 2792
73 Ga0105245_10151067 3300009098 Bacteria 2196
74 Ga0105247_10009167 3300009101 Bacteria 6023
75 Ga0105241_10025896 3300009174 Bacteria 4361
76 Ga0105242_10073653 3300009176 Bacteria 2840
77 Ga0105248_10126011 3300009177 Unclassified 2889
78 Ga0105237_10032265 3300009545 Bacteria 5303
79 Ga0105237_10079399 3300009545 Bacteria 3271
80 Ga0105238_10007204 3300009551 Bacteria 11134
81 Ga0105249_10135188 3300009553 Bacteria 2358
82 Ga0105239_10024014 3300010375 Bacteria 6715
83 Ga0105246_10004305 3300011119 Bacteria 8658
84 Ga0157373_10001258 3300013100 Bacteria 19350
85 Ga0157369_10011409 3300013105 Bacteria 10091
86 Ga0157369_10031773 3300013105 Bacteria 5809
87 Ga0157374_10069485 3300013296 Bacteria 3316
88 Ga0157378_10043026 3300013297 Unclassified 4010
89 Ga0163162_10042862 3300013306 Unclassified 4530
90 Ga0157372_10007560 3300013307 Bacteria 11553
91 Ga0157372_10139389 3300013307 Bacteria 2793
92 Ga0163163_10001450 3300014325 Bacteria 20041
93 Ga0157380_10007966 3300014326 Bacteria 7546
94 Ga0157377_10001019 3300014745 Bacteria 11815
95 Ga0157379_10011461 3300014968 Bacteria 7737
96 Ga0157376_10000008 3300014969 Bacteria 351192
97 Ga0157376_10000215 3300014969 Bacteria 40000
98 Ga0163161_10009760 3300017792 Bacteria 6652
99 Ga0228598_1000710 3300024227 Bacteria 7095
100 Ga0207697_10004545 3300025315 Bacteria 6609
101 Ga0207656_10027473 3300025321 Bacteria 2328
102 Ga0207692_10040518 3300025898 Bacteria 2299
103 Ga0207688_10004349 3300025901 Bacteria 7727
104 Ga0207647_10002048 3300025904 Bacteria 15405
105 Ga0207699_10008532 3300025906 Bacteria 5065
106 Ga0207699_10012313 3300025906 Unclassified 4348
107 Ga0207699_10109613 3300025906 Bacteria 1767
108 Ga0207645_10001509 3300025907 Bacteria 19050
109 Ga0207643_10000839 3300025908 Bacteria 18640
110 Ga0207684_10123312 3300025910 Bacteria 2222
111 Ga0207654_10003233 3300025911 Bacteria 8232
112 Ga0207707_10076115 3300025912 Unclassified 2928
113 Ga0207693_10001344 3300025915 Bacteria 21727
114 Ga0207693_10009555 3300025915 Bacteria 7898
115 Ga0207693_10012017 3300025915 Bacteria 7000
116 Ga0207663_10000360 3300025916 Bacteria 19773
117 Ga0207663_10004260 3300025916 Bacteria 7098
118 Ga0207663_10104703 3300025916 Unclassified 1908
119 Ga0207662_10002096 3300025918 Bacteria 9909
120 Ga0207657_10001307 3300025919 Bacteria 26452
121 Ga0207649_10000136 3300025920 Bacteria 62562
122 Ga0207652_10158437 3300025921 Unclassified 2028
123 Ga0207646_10002785 3300025922 Bacteria 20387
124 Ga0207646_10036206 3300025922 Unclassified 4456
125 Ga0207646_10056747 3300025922 Bacteria 3500
126 Ga0207646_10069868 3300025922 Bacteria 3136
127 Ga0207646_10115235 3300025922 Bacteria 2414
128 Ga0207650_10000040 3300025925 Bacteria 204095
129 Ga0207687_10001707 3300025927 Bacteria 15151
130 Ga0207687_10039754 3300025927 Unclassified 3221
131 Ga0207700_10008284 3300025928 Bacteria 6425
132 Ga0207700_10015540 3300025928 Bacteria 5026
133 Ga0207700_10112244 3300025928 Bacteria 2196
134 Ga0207644_10042786 3300025931 Bacteria 3211
135 Ga0207706_10000528 3300025933 Bacteria 40520
136 Ga0207686_10089925 3300025934 Bacteria 2024
137 Ga0207665_10000171 3300025939 Bacteria 43744
138 Ga0207665_10002795 3300025939 Bacteria 11697
139 Ga0207665_10004863 3300025939 Bacteria 8944
140 Ga0207665_10013571 3300025939 Bacteria 5359
141 Ga0207691_10001743 3300025940 Bacteria 21447
142 Ga0207689_10000303 3300025942 Bacteria 45120
143 Ga0207661_10000628 3300025944 Bacteria 22667
144 Ga0207679_10000049 3300025945 Bacteria 119045
145 Ga0207651_10015090 3300025960 Bacteria 4479
146 Ga0207703_10030077 3300026035 Bacteria 4290
147 Ga0207678_10000123 3300026067 Bacteria 64544
148 Ga0207702_10018191 3300026078 Bacteria 5813
149 Ga0207641_10000009 3300026088 Bacteria 407901
150 Ga0207648_10001207 3300026089 Bacteria 28952
151 Ga0207676_10000149 3300026095 Bacteria 60541
152 Ga0207674_10000010 3300026116 Bacteria 196710
153 Ga0207675_100020630 3300026118 Bacteria 6142
154 Ga0207683_10062555 3300026121 Bacteria 3278
155 Ga0207698_10084676 3300026142 Bacteria 2571
156 Ga0268266_10000283 3300028379 Bacteria 83686
157 Ga0268265_10018178 3300028380 Bacteria 4869
158 Ga0265770_1000643 3300030878 Unclassified 4845
159 Ga0265760_10000123 3300031090 Bacteria 19733
160 Ga0265760_10010368 3300031090 Bacteria 2661
161 Ga0265320_10029970 3300031240 Bacteria 2812
162 Ga0265339_10075496 3300031249 Bacteria 1789
163 Ga0265316_10003079 3300031344 Bacteria 17012
164 Ga0265316_10039425 3300031344 Unclassified 3794
165 Ga0307408_100000099 3300031548 Bacteria 95526
166 Ga0265314_10003977 3300031711 Bacteria 13983
167 Ga0307412_10141701 3300031911 Bacteria 1762
168 Ga0373955_0005706 3300035172 Bacteria 5605
169 Ga0373924_0000083 3300035410 Bacteria 25493
170 Ga0373935_0010917 3300035692 Bacteria 5454
171 Ga0373935_0021289 3300035692 Bacteria 3969
172 Ga0373927_0034990 3300035695 Bacteria 3266
173 Ga0373927_0066690 3300035695 Bacteria 2328
174 Ga0373933_0059457 3300035724 Bacteria 2302
175 Ga0373937_0050325 3300036401 Bacteria 3816
176 Ga0373925_0035756 3300037068 Unclassified 3666
177 Ga0373925_0048286 3300037068 Bacteria 3171
178 Ga0436363_0770847 3300039450 Bacteria 3907
179 Ga0436362_0814820 3300039453 Bacteria 4946
180 Ga0451576_0065051 3300045051 Bacteria 3797
181 Ga0495629_0037509 3300046459 Unclassified 3416
182 Ga0495638_0016029 3300046460 Bacteria 5022
183 Ga0495650_0000024 3300046471 Bacteria 496674
184 Ga0495580_0000223 3300046472 Bacteria 44018
185 Ga0495580_0002117 3300046472 Bacteria 17415
186 Ga0495580_0008717 3300046472 Bacteria 8039
187 Ga0495580_0011046 3300046472 Bacteria 7001
188 Ga0495582_0007144 3300046473 Bacteria 6203
189 Ga0495594_0011565 3300046499 Unclassified 4589
190 Ga0495583_0000013 3300046506 Bacteria 323372
191 Ga0495654_0000026 3300046530 Bacteria 234940
192 Ga0495657_0027482 3300046675 Unclassified 4014
193 Ga0495658_0081634 3300046683 Bacteria 1899
194 Ga0495613_0069751 3300046689 Unclassified 2562
195 Ga0495674_0042018 3300047319 Bacteria 4081
196 Ga0495674_0046666 3300047319 Unclassified 3845
197 Ga0496101_0040980 3300048904 Bacteria 3300
198 Ga0496102_0087105 3300048905 Bacteria 2885
199 Ga0496102_0121277 3300048905 Bacteria 2442
200 Ga0496104_0003019 3300048907 Bacteria 14496
201 Ga0496104_0204835 3300048907 Unclassified 1884
202 Ga0496105_0021375 3300048908 Bacteria 5237
203 Ga0496108_0025635 3300048911 Bacteria 4860
204 Ga0496109_0000084 3300048912 Bacteria 95803
205 Ga0496112_0000119 3300048915 Bacteria 49202
206 Ga0496112_0000181 3300048915 Bacteria 40475
207 Ga0496112_0057416 3300048915 Bacteria 3832
208 Ga0496112_0065604 3300048915 Bacteria 3583
209 Ga0496113_0001186 3300048916 Bacteria 14245
210 Ga0496113_0038285 3300048916 Bacteria 3525
211 Ga0496114_0143618 3300048917 Bacteria 2068
212 Ga0496114_0161885 3300048917 Bacteria 1946
213 Ga0496115_0001225 3300048918 Bacteria 18422
214 Ga0496115_0080361 3300048918 Bacteria 2654
215 Ga0501031_0009225 3300049568 Bacteria 6413
216 Ga0501033_0002479 3300049570 Bacteria 15646
217 Ga0501033_0038163 3300049570 Bacteria 3593
218 Ga0501034_0043974 3300049571 Bacteria 4517
219 Ga0501036_0005864 3300049572 Bacteria 9950
220 Ga0501036_0025681 3300049572 Bacteria 4971
221 Ga0501036_0047103 3300049572 Bacteria 3651
222 Ga0501037_0002014 3300049573 Bacteria 14721
223 Ga0501038_0004959 3300049574 Bacteria 12361
224 Ga0501038_0005363 3300049574 Bacteria 11910
225 Ga0501039_0004384 3300049575 Bacteria 10642
226 Ga0501039_0024706 3300049575 Bacteria 4616
227 Ga0501040_0067791 3300049576 Bacteria 2460
228 Ga0501042_0012965 3300049578 Bacteria 5662
229 Ga0501043_0071390 3300049579 Bacteria 2727
230 Ga0501046_0006794 3300049580 Bacteria 10094
231 Ga0501046_0066814 3300049580 Bacteria 2801
232 Ga0501047_0003392 3300049581 Bacteria 15077
233 Ga0501047_0033189 3300049581 Bacteria 4982
234 Ga0501048_0003482 3300049582 Bacteria 11959
235 Ga0501048_0021052 3300049582 Bacteria 4777
236 Ga0501067_0000774 3300049583 Bacteria 17182
237 Ga0501068_0002600 3300049584 Bacteria 9554
238 Ga0501068_0035236 3300049584 Bacteria 2986
239 Ga0501069_0002058 3300049585 Bacteria 10104
240 Ga0501069_0006520 3300049585 Bacteria 6101
241 Ga0501070_0005074 3300049586 Bacteria 11218
242 Ga0501071_0010357 3300049587 Bacteria 6245
243 Ga0501072_0107117 3300049588 Bacteria 2223
244 Ga0501073_0016831 3300049589 Bacteria 5297
245 Ga0501073_0017615 3300049589 Bacteria 5172
246 Ga0501074_0008618 3300049590 Bacteria 7384
247 Ga0501079_0004794 3300049741 Bacteria 10028
248 Ga0501079_0006110 3300049741 Bacteria 9028
249 Ga0501080_0044539 3300049742 Bacteria 4130
250 Ga0501081_0092180 3300049743 Bacteria 2132
251 Ga0501083_0052207 3300049744 Bacteria 2747
252 Ga0501035_0001474 3300049822 Bacteria 24086
253 Ga0501035_0023572 3300049822 Bacteria 5646
254 Ga0501044_0009486 3300049823 Bacteria 10596
255 Ga0501044_0026896 3300049823 Bacteria 6088
256 Ga0501044_0196380 3300049823 Bacteria 1977
257 Ga0501045_0004323 3300049824 Bacteria 9797
258 nmdc:mga07m45_29234_c1 3300050496 Bacteria 3046
259 nmdc:mga0n895_18391_c1 3300050512 Bacteria 6465
260 nmdc:mga0n895_33902_c1 3300050512 Unclassified 4910
261 nmdc:mga0rr50_69157_c1 3300050513 Bacteria 2686
262 nmdc:mga0a205_199232_c1 3300050515 Unclassified 1893
263 Ga0495619_0146732 3300053085 Bacteria 1627
264 Ga0500643_003765 3300053087 Bacteria 7113
265 Ga0500556_0000460 3300053104 Bacteria 28688
266 Ga0500627_0002456 3300053158 Bacteria 5499
267 Ga0501084_0028642 3300054114 Bacteria 4657
268 Ga0501084_0087396 3300054114 Bacteria 2617
269 Ga0501082_0021372 3300060353 Bacteria 5582
270 2643929074 2643221584 Bacteria 5511711
271 2792460026 2791355048 Bacteria 5832535
272 2843746972 2843744320 Bacteria 5659202
273 2849565510 2849560528 Bacteria 5393480
274 2849574547 2849573788 Bacteria 5421256
275 2851153112 2851153111 Bacteria 5542585
276 2898331352 2898329390 Bacteria 5168154
277 8057104772 8057101203 Bacteria 5034064
278 Ga0207693_10073311
279 JGI24034J26672_10002259
280 JGI24751J29686_10002674
281 rootL2_10040315
282 Ga0065707_10134161
283 Ga0070676_10001567
284 Ga0070683_100005434
285 Ga0070683_100074592
286 Ga0070670_100018199
287 Ga0070677_10006899
288 Ga0068869_100004064
289 Ga0070666_10010526
290 Ga0070660_100005399
291 Ga0070689_100016792
292 Ga0070668_100011170
293 Ga0070668_100053886
294 Ga0070671_100127981
295 Ga0070674_100039704
296 Ga0070688_100003452
297 Ga0070659_100003722
298 Ga0070709_10000783
299 Ga0070713_100007140
300 Ga0070713_100007540
301 Ga0070713_100133488
302 Ga0070710_10011082
303 Ga0070701_10000115
304 Ga0070711_100007306
305 Ga0070711_100076561
306 Ga0070708_100011000
307 Ga0070681_10011367
308 Ga0068867_100012051
309 Ga0070685_10020041
310 Ga0070685_10032697
311 Ga0070707_100074982
312 Ga0070707_100175716
313 Ga0070698_100014298
314 Ga0070684_100010625
315 Ga0070697_100102408
316 Ga0068853_100032817
317 Ga0070665_100001279
318 Ga0068855_100037793
319 Ga0070664_100023920
320 Ga0068854_100028053
321 Ga0068856_100070562
322 Ga0068856_100080321
323 Ga0068852_100001444
324 Ga0068864_100090726
325 Ga0068870_10000743
326 Ga0068863_100012946
327 Ga0068863_100022216
328 Ga0068858_100102249
329 Ga0068860_100066511
330 Ga0070717_10003800
331 Ga0070717_10006647
332 Ga0070717_10046634
333 Ga0070717_10059061
334 Ga0070717_10066568
335 Ga0070717_10073432
336 Ga0070716_100000063
337 Ga0070716_100004247
338 Ga0070716_100029345
339 Ga0070712_100000547
340 Ga0070712_100018329
341 Ga0070712_100027558
342 Ga0097621_100048904
343 Ga0068871_100044253
344 Ga0075434_100015069
345 Ga0075434_100031052
346 Ga0075434_100036851
347 Ga0105245_10000856
348 Ga0105245_10017241
349 Ga0105245_10092010
350 Ga0105245_10151067
351 Ga0105247_10009167
352 Ga0105241_10025896
353 Ga0105242_10073653
354 Ga0105248_10126011
355 Ga0105237_10032265
356 Ga0105237_10079399
357 Ga0105238_10007204
358 Ga0105249_10135188
359 Ga0105239_10024014
360 Ga0105246_10004305
361 Ga0157373_10001258
362 Ga0157369_10011409
363 Ga0157369_10031773
364 Ga0157374_10069485
365 Ga0157378_10043026
366 Ga0163162_10042862
367 Ga0157372_10007560
368 Ga0157372_10139389
369 Ga0163163_10001450
370 Ga0157380_10007966
371 Ga0157377_10001019
372 Ga0157379_10011461
373 Ga0157376_10000008
374 Ga0157376_10000215
375 Ga0163161_10009760
376 Ga0228598_1000710
377 Ga0207697_10004545
378 Ga0207656_10027473
379 Ga0207692_10040518
380 Ga0207688_10004349
381 Ga0207647_10002048
382 Ga0207699_10008532
383 Ga0207699_10012313
384 Ga0207699_10109613
385 Ga0207645_10001509
386 Ga0207643_10000839
387 Ga0207684_10123312
388 Ga0207654_10003233
389 Ga0207707_10076115
390 Ga0207693_10001344
391 Ga0207693_10009555
392 Ga0207693_10012017
393 Ga0207663_10000360
394 Ga0207663_10004260
395 Ga0207663_10104703
396 Ga0207662_10002096
397 Ga0207657_10001307
398 Ga0207649_10000136
399 Ga0207652_10158437
400 Ga0207646_10002785
401 Ga0207646_10036206
402 Ga0207646_10056747
403 Ga0207646_10069868
404 Ga0207646_10115235
405 Ga0207650_10000040
406 Ga0207687_10001707
407 Ga0207687_10039754
408 Ga0207700_10008284
409 Ga0207700_10015540
410 Ga0207700_10112244
411 Ga0207644_10042786
412 Ga0207706_10000528
413 Ga0207686_10089925
414 Ga0207665_10000171
415 Ga0207665_10002795
416 Ga0207665_10004863
417 Ga0207665_10013571
418 Ga0207691_10001743
419 Ga0207689_10000303
420 Ga0207661_10000628
421 Ga0207679_10000049
422 Ga0207651_10015090
423 Ga0207703_10030077
424 Ga0207678_10000123
425 Ga0207702_10018191
426 Ga0207641_10000009
427 Ga0207648_10001207
428 Ga0207676_10000149
429 Ga0207674_10000010
430 Ga0207675_100020630
431 Ga0207683_10062555
432 Ga0207698_10084676
433 Ga0268266_10000283
434 Ga0268265_10018178
435 Ga0265770_1000643
436 Ga0265760_10000123
437 Ga0265760_10010368
438 Ga0265320_10029970
439 Ga0265339_10075496
440 Ga0265316_10003079
441 Ga0265316_10039425
442 Ga0307408_100000099
443 Ga0265314_10003977
444 Ga0307412_10141701
445 Ga0373955_0005706
446 Ga0373924_0000083
447 Ga0373935_0010917
448 Ga0373935_0021289
449 Ga0373927_0034990
450 Ga0373927_0066690
451 Ga0373933_0059457
452 Ga0373937_0050325
453 Ga0373925_0035756
454 Ga0373925_0048286
455 Ga0436363_0770847
456 Ga0436362_0814820
457 Ga0451576_0065051
458 Ga0495629_0037509
459 Ga0495638_0016029
460 Ga0495650_0000024
461 Ga0495580_0000223
462 Ga0495580_0002117
463 Ga0495580_0008717
464 Ga0495580_0011046
465 Ga0495582_0007144
466 Ga0495594_0011565
467 Ga0495583_0000013
468 Ga0495654_0000026
469 Ga0495657_0027482
470 Ga0495658_0081634
471 Ga0495613_0069751
472 Ga0495674_0042018
473 Ga0495674_0046666
474 Ga0496101_0040980
475 Ga0496102_0087105
476 Ga0496102_0121277
477 Ga0496104_0003019
478 Ga0496104_0204835
479 Ga0496105_0021375
480 Ga0496108_0025635
481 Ga0496109_0000084
482 Ga0496112_0000119
483 Ga0496112_0000181
484 Ga0496112_0057416
485 Ga0496112_0065604
486 Ga0496113_0001186
487 Ga0496113_0038285
488 Ga0496114_0143618
489 Ga0496114_0161885
490 Ga0496115_0001225
491 Ga0496115_0080361
492 Ga0501031_0009225
493 Ga0501033_0002479
494 Ga0501033_0038163
495 Ga0501034_0043974
496 Ga0501036_0005864
497 Ga0501036_0025681
498 Ga0501036_0047103
499 Ga0501037_0002014
500 Ga0501038_0004959
501 Ga0501038_0005363
502 Ga0501039_0004384
503 Ga0501039_0024706
504 Ga0501040_0067791
505 Ga0501042_0012965
506 Ga0501043_0071390
507 Ga0501046_0006794
508 Ga0501046_0066814
509 Ga0501047_0003392
510 Ga0501047_0033189
511 Ga0501048_0003482
512 Ga0501048_0021052
513 Ga0501067_0000774
514 Ga0501068_0002600
515 Ga0501068_0035236
516 Ga0501069_0002058
517 Ga0501069_0006520
518 Ga0501070_0005074
519 Ga0501071_0010357
520 Ga0501072_0107117
521 Ga0501073_0016831
522 Ga0501073_0017615
523 Ga0501074_0008618
524 Ga0501079_0004794
525 Ga0501079_0006110
526 Ga0501080_0044539
527 Ga0501081_0092180
528 Ga0501083_0052207
529 Ga0501035_0001474
530 Ga0501035_0023572
531 Ga0501044_0009486
532 Ga0501044_0026896
533 Ga0501044_0196380
534 Ga0501045_0004323
535 nmdc:mga07m45_29234_c1
536 nmdc:mga0n895_18391_c1
537 nmdc:mga0n895_33902_c1
538 nmdc:mga0rr50_69157_c1
539 nmdc:mga0a205_199232_c1
540 Ga0495619_0146732
541 Ga0500643_003765
542 Ga0500556_0000460
543 Ga0500627_0002456
544 Ga0501084_0028642
545 Ga0501084_0087396
546 Ga0501082_0021372
547 2643929074
548 2792460026
549 2843746972
550 2849565510
551 2849574547
552 2851153112
553 2898331352
554 8057104772

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04389

Peptidase_M28

Peptidase family M28

349

569

0.94

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

367

513

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xjo-assembly1.cif.gz_A structure of aminopeptidase 0.8138 286 511
1tkj-assembly1.cif.gz_A streptomyces griseus aminopeptidase complexed with d-methionine 0.8137 286 511
2anp-assembly1.cif.gz_A functional glutamate 151 to histidine mutant of the aminopeptidase from aeromonas proteolytica. 0.8125 289 515
6ica-assembly3.cif.gz_C the crystal structure of legionella pneumophila lapa aminopeptidase 0.8057 288 515
1amp-assembly1.cif.gz_A crystal structure of aeromonas proteolytica aminopeptidase: a prototypical member of the co-catalytic zinc enzyme family 0.8037 289 515
ID Description Score Start End Superfamily
5ib9A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8152 282 516 3.40.630.10
1xjoA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8138 286 511 3.40.630.10
af_Q59RF7_72_332_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7886 282 515 3.40.630.10
af_O94479_48_334_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7807 282 516 3.40.630.10
af_P38244_57_339_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.768 280 523 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A7W0W0Q8-F1-model_v4 M28 family peptidase 0.9745 29 529 GO:0006508
GO:0008235
AF-A0A3A5GCG4-F1-model_v4 deleted 0.9724 22 529
AF-A0A1Q7MV02-F1-model_v4 Peptidase M28 0.972 21 361 GO:0006508
GO:0008233
AF-A0A1Q6X6I6-F1-model_v4 Peptidase M28 domain-containing protein 0.9661 1 531 GO:0006508
GO:0008235
AF-A0A7V9PI72-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9609 290 531 GO:0006508
GO:0008235

Map