F381784

General Info

Members Datasets Scaffolds Average Seq Length
277 166 256 475

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10009605|Ga0163162_100096056
Length 547
Sequence MSSTIANVRRLSNRASPHGSTGRPRSRKHNDTPNQAESECSPHSAADTPELFALGKAWSLLRAMTAVVALTAAVSGCAVGPDYEAPSTHLAPFHNRVATNDARPSTPAPPLDTWWTGFNDPTLATVVQRVLAQNLDLAAAFARVQQARAVAAGAGAQLLPTLDFDASGTALHQSLQSPIGSIARTLPGYSRDQRDSTAGAVASWEIDVAGGLRRNAAAAREEAQAAQAEQLGTRITVAADAADAYLQIRGFQARLAVTQDQIDTDARLLELVRVRRRAGASDEREIAQAEALLKQAMATVPVLRTALEAQMNRLDVLMGAQPGTYAEELAIPGPIPAIPRIDDSDQPLDVLRRRPDIIAAERRLAASNERIGAAIADYYPKVSLSGLLGFDSISASHLFTASAFQAAGTGALRWRLFDFGRVDAEVRQARGANAEALALYRLSVLKAAEDVENAFTALSQTEARRQELQDEVASLTRARDLSERAYKAGAITLTDVLDADRQLLVARDELDSVRAELARAAVGTFRALGGGWASPSDVRTASAGVLF

Samples

Sample ID Description Type Environment
1 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
2 2547132374 Acidovorax radicis N35 Isolate Unclassified
3 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
4 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
5 2643221717 Acidovorax sp. Root267 Isolate Unclassified
6 2739367700 Dyella sp. YR388 Isolate Unclassified
7 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
8 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
9 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
10 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
11 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
12 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
13 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
14 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
15 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
16 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
17 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
18 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
19 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
20 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
21 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
22 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
23 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
24 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
25 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
64 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
97 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
98 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
104 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
115 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
118 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
119 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
122 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
131 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
132 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
155 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
161 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
162 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
163 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
166 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.42
Metatranscriptomes 0
Isolates 7.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.83
Nodule 1.08
Rhizoplane 7.58
Rhizosphere 62.09
Stem 0
Stem Tuber 0
Unclassified 18.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007373 3300001979 Bacteria 4476
2 JGI25151J46595_10006237 3300003187 Bacteria 6026
3 rootH2_10009642 3300003320 Bacteria 34527
4 rootH2_10128022 3300003320 Bacteria 3574
5 JGI25160J50197_1000138 3300003354 Bacteria 65562
6 Ga0055524_1000216 3300003775 Bacteria 61153
7 Ga0055536_1000063 3300003781 Bacteria 99049
8 Ga0055534_1000193 3300003784 Bacteria 44748
9 Ga0055534_1001206 3300003784 Bacteria 10831
10 Ga0065165_1001078 3300005262 Bacteria 32546
11 Ga0065703_1000146 3300005272 Bacteria 26902
12 Ga0070658_10054977 3300005327 Bacteria 3233
13 Ga0068868_100075248 3300005338 Bacteria 2698
14 Ga0070669_100006362 3300005353 Bacteria 8508
15 Ga0070671_100005038 3300005355 Bacteria 10535
16 Ga0070679_100049821 3300005530 Bacteria 4172
17 Ga0070697_100012724 3300005536 Bacteria 6588
18 Ga0070697_100045707 3300005536 Bacteria 3549
19 Ga0070665_100000070 3300005548 Bacteria 200681
20 Ga0070665_100002304 3300005548 Bacteria 21181
21 Ga0070665_100003726 3300005548 Bacteria 16142
22 Ga0070665_100004451 3300005548 Bacteria 14719
23 Ga0070665_100088087 3300005548 Bacteria 3110
24 Ga0068855_100052785 3300005563 Bacteria 4785
25 Ga0068855_100201501 3300005563 Bacteria 2240
26 Ga0068858_100000653 3300005842 Bacteria 36191
27 Ga0068860_100050155 3300005843 Bacteria 3974
28 Ga0068862_100018497 3300005844 Bacteria 5803
29 Ga0068862_100052127 3300005844 Bacteria 3500
30 Ga0075434_100080063 3300006871 Plasmid 3263
31 Ga0075436_100075164 3300006914 Bacteria 2339
32 Ga0075435_100129571 3300007076 Bacteria 2111
33 Ga0105251_10001150 3300009011 Bacteria 23013
34 Ga0105244_10002796 3300009036 Bacteria 12976
35 Ga0105240_10000236 3300009093 Bacteria 110204
36 Ga0105240_10000477 3300009093 Bacteria 74075
37 Ga0105240_10010197 3300009093 Bacteria 13224
38 Ga0105240_10014690 3300009093 Bacteria 10683
39 Ga0105240_10084272 3300009093 Bacteria 3898
40 Ga0105240_10311680 3300009093 Bacteria 1797
41 Ga0105243_10000010 3300009148 Bacteria 316672
42 Ga0105243_10005703 3300009148 Bacteria 9678
43 Ga0105243_10037883 3300009148 Bacteria 3752
44 Ga0105248_10019815 3300009177 Bacteria 7450
45 Ga0105237_10043484 3300009545 Bacteria 4524
46 Ga0105237_10046695 3300009545 Bacteria 4356
47 Ga0105237_10047792 3300009545 Bacteria 4302
48 Ga0105237_10091514 3300009545 Bacteria 3031
49 Ga0105237_10100552 3300009545 Bacteria 2883
50 Ga0105238_10001467 3300009551 Bacteria 23687
51 Ga0105238_10003140 3300009551 Bacteria 16486
52 Ga0105238_10007396 3300009551 Bacteria 11003
53 Ga0105239_10000110 3300010375 Bacteria 115508
54 Ga0105239_10002972 3300010375 Bacteria 21142
55 Ga0105239_10064406 3300010375 Bacteria 4024
56 Ga0157373_10002770 3300013100 Bacteria 13257
57 Ga0157371_10001115 3300013102 Bacteria 29118
58 Ga0157370_10009784 3300013104 Bacteria 10169
59 Ga0157369_10086030 3300013105 Bacteria 3358
60 Ga0157374_10026834 3300013296 Bacteria 5187
61 Ga0157374_10158544 3300013296 Bacteria 2204
62 Ga0163162_10009605 3300013306 Bacteria 9412
63 Ga0163162_10012458 3300013306 Bacteria 8309
64 Ga0163163_10079355 3300014325 Bacteria 3281
65 Ga0182008_10023124 3300014497 Bacteria 3178
66 Ga0157379_10075232 3300014968 Bacteria 3023
67 Ga0163161_10025019 3300017792 Bacteria 4221
68 Ga0213872_10000612 3300021361 Bacteria 27051
69 Ga0213872_10006232 3300021361 Bacteria 6024
70 Ga0213872_10007989 3300021361 Bacteria 5149
71 Ga0213872_10016943 3300021361 Bacteria 3375
72 Ga0209672_100697 3300025228 Bacteria 16844
73 Ga0209565_1000072 3300025263 Bacteria 164988
74 Ga0209565_1007142 3300025263 Bacteria 3043
75 Ga0209675_1000049 3300025291 Bacteria 215042
76 Ga0209675_1000065 3300025291 Bacteria 174791
77 Ga0209675_1003183 3300025291 Bacteria 7965
78 Ga0209676_1000044 3300025292 Bacteria 416215
79 Ga0209025_1000147 3300025294 Bacteria 180008
80 Ga0209025_1003503 3300025294 Bacteria 14754
81 Ga0209564_1000080 3300025295 Bacteria 263547
82 Ga0209564_1000130 3300025295 Bacteria 194399
83 Ga0209564_1000253 3300025295 Bacteria 114335
84 Ga0209256_1000126 3300025299 Bacteria 165242
85 Ga0209256_1000127 3300025299 Bacteria 164393
86 Ga0207426_1000018 3300025302 Bacteria 566740
87 Ga0207696_1007842 3300025711 Bacteria 4139
88 Ga0207713_1005167 3300025735 Bacteria 8249
89 Ga0207705_10075935 3300025909 Bacteria 2442
90 Ga0207695_10001342 3300025913 Bacteria 41747
91 Ga0207695_10009068 3300025913 Bacteria 12362
92 Ga0207695_10022859 3300025913 Bacteria 7083
93 Ga0207671_10000500 3300025914 Bacteria 53262
94 Ga0207652_10002471 3300025921 Bacteria 15575
95 Ga0207681_10013575 3300025923 Bacteria 5045
96 Ga0207694_10000419 3300025924 Bacteria 39631
97 Ga0207694_10000907 3300025924 Bacteria 26215
98 Ga0207644_10000327 3300025931 Bacteria 30858
99 Ga0207709_10000001 3300025935 Bacteria 2228154
100 Ga0207709_10003795 3300025935 Bacteria 8874
101 Ga0207709_10060718 3300025935 Bacteria 2358
102 Ga0207667_10073766 3300025949 Bacteria 3545
103 Ga0207658_10004528 3300025986 Bacteria 9653
104 Ga0207677_10087706 3300026023 Bacteria 2253
105 Ga0207703_10000437 3300026035 Bacteria 43844
106 Ga0207678_10202169 3300026067 Bacteria 1699
107 Ga0207641_10242343 3300026088 Bacteria 1680
108 Ga0268266_10000004 3300028379 Bacteria 1495817
109 Ga0268266_10000174 3300028379 Bacteria 115953
110 Ga0268266_10003013 3300028379 Bacteria 17303
111 Ga0268266_10003107 3300028379 Bacteria 16917
112 Ga0268266_10009012 3300028379 Bacteria 8821
113 Ga0268266_10029507 3300028379 Bacteria 4662
114 Ga0268266_10068030 3300028379 Bacteria 3083
115 Ga0268266_10235835 3300028379 Bacteria 1687
116 Ga0268265_10002551 3300028380 Bacteria 13634
117 Ga0268265_10111731 3300028380 Bacteria 2232
118 Ga0268264_10010295 3300028381 Bacteria 7738
119 Ga0268264_10035294 3300028381 Bacteria 4116
120 Ga0265338_10001259 3300028800 Bacteria 41748
121 Ga0307412_10001433 3300031911 Bacteria 13280
122 Ga0307510_10003576 3300033180 Bacteria 18154
123 Ga0307510_10037921 3300033180 Bacteria 5337
124 Ga0436365_0392867 3300039437 Bacteria 4384
125 Ga0436361_0106436 3300039447 Bacteria 8819
126 Ga0436361_0329722 3300039447 Bacteria 5655
127 Ga0436361_0501595 3300039447 Bacteria 4286
128 Ga0436361_0589128 3300039447 Bacteria 5773
129 Ga0436361_0703869 3300039447 Bacteria 2244
130 Ga0436361_0725040 3300039447 Bacteria 5332
131 Ga0436361_0726990 3300039447 Bacteria 13581
132 Ga0436361_0854298 3300039447 Bacteria 36657
133 Ga0436361_0941207 3300039447 Bacteria 2855
134 Ga0439466_0038574 3300041411 Bacteria 1604
135 Ga0466977_0000031 3300044666 Bacteria 22874
136 Ga0495591_006298 3300046458 Bacteria 5275
137 Ga0495638_0000062 3300046460 Bacteria 188223
138 Ga0495653_0000411 3300046463 Bacteria 34290
139 Ga0495650_0007271 3300046471 Bacteria 6699
140 Ga0495580_0002775 3300046472 Bacteria 15082
141 Ga0495605_0000007 3300046474 Bacteria 358289
142 Ga0495605_0001662 3300046474 Bacteria 14294
143 Ga0495584_0001516 3300046491 Bacteria 13807
144 Ga0495583_0000007 3300046506 Bacteria 434661
145 Ga0495583_0000030 3300046506 Bacteria 254970
146 Ga0495606_0000090 3300046507 Bacteria 154737
147 Ga0495606_0000109 3300046507 Bacteria 139572
148 Ga0495606_0000249 3300046507 Bacteria 94749
149 Ga0495606_0001501 3300046507 Bacteria 31006
150 Ga0495606_0033199 3300046507 Bacteria 3563
151 Ga0495610_0000080 3300046512 Bacteria 114528
152 Ga0495610_0001681 3300046512 Bacteria 19429
153 Ga0495610_0003481 3300046512 Bacteria 12245
154 Ga0495620_0000129 3300046515 Bacteria 61499
155 Ga0495628_0120378 3300046516 Bacteria 2014
156 Ga0495630_0020414 3300046517 Bacteria 4885
157 Ga0495648_0015475 3300046524 Bacteria 5538
158 Ga0495654_0001901 3300046530 Bacteria 13879
159 Ga0495665_0016122 3300046531 Bacteria 4025
160 Ga0495609_0000004 3300046538 Bacteria 697346
161 Ga0495597_0001518 3300046542 Bacteria 16519
162 Ga0495645_0110632 3300046543 Bacteria 1944
163 Ga0495622_0009553 3300046557 Bacteria 4489
164 Ga0495633_0000020 3300046558 Bacteria 227180
165 Ga0495611_0002209 3300046648 Bacteria 9046
166 Ga0495625_0020804 3300046660 Bacteria 5059
167 Ga0495625_0050876 3300046660 Bacteria 2971
168 Ga0495625_0164553 3300046660 Bacteria 1484
169 Ga0495661_0000009 3300046665 Bacteria 291327
170 Ga0495588_0001940 3300046674 Bacteria 8835
171 Ga0495624_0016519 3300046690 Bacteria 4967
172 Ga0495671_0011249 3300046692 Bacteria 4934
173 Ga0495649_0001656 3300046694 Bacteria 16575
174 Ga0495589_0000748 3300046794 Bacteria 20855
175 Ga0495604_0001491 3300047317 Bacteria 19298
176 Ga0495674_0056809 3300047319 Bacteria 3426
177 Ga0495676_0000540 3300047321 Bacteria 31009
178 Ga0495683_0000003 3300047323 Bacteria 383992
179 Ga0495675_0040440 3300047444 Bacteria 2971
180 Ga0495675_0050558 3300047444 Bacteria 2642
181 Ga0495679_001919 3300047446 Bacteria 11118
182 Ga0495673_0002904 3300047469 Bacteria 11625
183 Ga0495673_0013078 3300047469 Bacteria 4372
184 Ga0495673_0020013 3300047469 Bacteria 3340
185 Ga0495686_0001465 3300047472 Bacteria 25695
186 Ga0495686_0004974 3300047472 Bacteria 10687
187 Ga0495614_0000702 3300048089 Bacteria 14101
188 Ga0496100_0000149 3300048903 Bacteria 38827
189 Ga0496100_0022014 3300048903 Bacteria 3850
190 Ga0496101_0000204 3300048904 Bacteria 45284
191 Ga0496101_0002782 3300048904 Bacteria 10725
192 Ga0496101_0021497 3300048904 Bacteria 4434
193 Ga0496102_0000114 3300048905 Bacteria 114310
194 Ga0496102_0000298 3300048905 Bacteria 63657
195 Ga0496102_0157419 3300048905 Bacteria 2136
196 Ga0496103_0000253 3300048906 Bacteria 51430
197 Ga0496103_0000429 3300048906 Bacteria 36512
198 Ga0496103_0001956 3300048906 Bacteria 13325
199 Ga0496105_0003088 3300048908 Bacteria 12245
200 Ga0496105_0003478 3300048908 Bacteria 11653
201 Ga0496107_0037842 3300048910 Bacteria 3463
202 Ga0496107_0047376 3300048910 Bacteria 3096
203 Ga0496107_0051719 3300048910 Bacteria 2964
204 Ga0496115_0001964 3300048918 Bacteria 14674
205 Ga0496115_0003074 3300048918 Bacteria 11986
206 Ga0496115_0025940 3300048918 Bacteria 4568
207 Ga0496116_0000412 3300048919 Bacteria 61089
208 Ga0496117_0000171 3300048920 Bacteria 135051
209 Ga0496117_0000207 3300048920 Bacteria 114310
210 Ga0496117_0008244 3300048920 Bacteria 9931
211 Ga0496117_0041226 3300048920 Bacteria 3385
212 Ga0496118_0000276 3300048921 Bacteria 90379
213 Ga0496118_0001267 3300048921 Bacteria 38755
214 Ga0496118_0003403 3300048921 Bacteria 20102
215 Ga0496118_0006220 3300048921 Bacteria 13205
216 Ga0496118_0006870 3300048921 Bacteria 12327
217 Ga0496119_0000029 3300048922 Bacteria 243194
218 Ga0496119_0000575 3300048922 Bacteria 49434
219 Ga0496119_0002565 3300048922 Bacteria 19762
220 Ga0496119_0017832 3300048922 Bacteria 5322
221 Ga0496119_0069705 3300048922 Bacteria 2065
222 Ga0496120_0000015 3300048923 Bacteria 310795
223 Ga0496120_0000039 3300048923 Bacteria 202237
224 Ga0496120_0001145 3300048923 Bacteria 34039
225 Ga0496121_0000017 3300048924 Bacteria 546415
226 Ga0496121_0000408 3300048924 Bacteria 85494
227 Ga0496121_0004389 3300048924 Bacteria 19038
228 Ga0496121_0027579 3300048924 Bacteria 5311
229 Ga0496121_0101619 3300048924 Bacteria 2217
230 Ga0496122_0027800 3300048925 Bacteria 4823
231 Ga0496123_0050687 3300048926 Bacteria 2771
232 Ga0496124_0000210 3300048927 Bacteria 114310
233 Ga0496124_0041672 3300048927 Bacteria 3959
234 Ga0496124_0051301 3300048927 Bacteria 3511
235 Ga0496125_0001874 3300048928 Bacteria 28883
236 Ga0496126_0000064 3300048929 Bacteria 255729
237 Ga0496126_0004410 3300048929 Bacteria 16855
238 Ga0496126_0004796 3300048929 Bacteria 15891
239 Ga0496126_0020946 3300048929 Bacteria 6399
240 Ga0496126_0066179 3300048929 Bacteria 3232
241 Ga0496126_0066926 3300048929 Bacteria 3211
242 Ga0496126_0100029 3300048929 Bacteria 2539
243 Ga0495678_000007 3300049459 Bacteria 448039
244 Ga0495682_0003622 3300049460 Bacteria 6812
245 Ga0495682_0009438 3300049460 Bacteria 3807
246 nmdc:mga00v17_333_c1 3300050491 Bacteria 26573
247 nmdc:mga07m45_422_c1 3300050496 Bacteria 17511
248 nmdc:mga0rr50_173583_c1 3300050513 Bacteria 1758
249 nmdc:mga08x19_95095_c1 3300050514 Bacteria 1971
250 nmdc:mga0a205_39691_c1 3300050515 Bacteria 4530
251 Ga0500571_000014 3300053110 Bacteria 67097
252 Ga0500608_010558 3300053122 Bacteria 3969
253 Ga0500658_0000018 3300053134 Bacteria 141217
254 Ga0500559_0009196 3300053136 Bacteria 4289
255 Ga0500616_0003789 3300053153 Bacteria 11230
256 Ga0500636_0011903 3300053177 Bacteria 5095

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041411 Ga0439466_0038574 Ga0439466_0038574_136_1293 385
2 3300048922 Ga0496119_0000575 Ga0496119_0000575_18864_20108 387
3 3300048923 Ga0496120_0001145 Ga0496120_0001145_27703_28947 387
4 3300014968 Ga0157379_10075232 Ga0157379_100752322 392
5 iso_pu_bacteria 2928526807 2928529853 417
6 3300009545 Ga0105237_10100552 Ga0105237_101005522 424
7 3300009093 Ga0105240_10311680 Ga0105240_103116801 425
8 3300009545 Ga0105237_10047792 Ga0105237_100477924 425
9 3300028800 Ga0265338_10001259 Ga0265338_1000125911 426
10 3300005548 Ga0070665_100000070 Ga0070665_1000000707 431
11 3300028379 Ga0268266_10003107 Ga0268266_100031077 431
12 3300048905 Ga0496102_0157419 Ga0496102_0157419_673_2097 431
13 3300048906 Ga0496103_0001956 Ga0496103_0001956_1615_3039 431
14 3300048920 Ga0496117_0008244 Ga0496117_0008244_5323_6747 431
15 3300048921 Ga0496118_0006220 Ga0496118_0006220_4178_5602 431
16 3300048927 Ga0496124_0041672 Ga0496124_0041672_1443_2867 431
17 3300050515 nmdc:mga0a205_39691_c1 nmdc:mga0a205_39691_c1_1540_2925 431
18 3300028381 Ga0268264_10010295 Ga0268264_100102952 432
19 3300039437 Ga0436365_0392867 Ga0436365_0392867_541_2010 433
20 3300048929 Ga0496126_0066926 Ga0496126_0066926_642_2105 433
21 3300031911 Ga0307412_10001433 Ga0307412_100014335 434
22 3300005355 Ga0070671_100005038 Ga0070671_1000050383 436
23 3300005844 Ga0068862_100018497 Ga0068862_1000184976 436
24 3300025931 Ga0207644_10000327 Ga0207644_1000032723 436
25 3300028380 Ga0268265_10002551 Ga0268265_100025512 436
26 3300005563 Ga0068855_100052785 Ga0068855_1000527852 437
27 3300025949 Ga0207667_10073766 Ga0207667_100737662 437
28 3300046660 Ga0495625_0164553 Ga0495625_0164553_126_1466 437
29 3300025291 Ga0209675_1000049 Ga0209675_100004971 439
30 3300003775 Ga0055524_1000216 Ga0055524_100021631 440
31 3300003784 Ga0055534_1000193 Ga0055534_100019315 440
32 3300005338 Ga0068868_100075248 Ga0068868_1000752482 440
33 3300005843 Ga0068860_100050155 Ga0068860_1000501552 440
34 3300009093 Ga0105240_10010197 Ga0105240_100101979 440
35 3300009551 Ga0105238_10007396 Ga0105238_100073966 440
36 3300010375 Ga0105239_10002972 Ga0105239_100029726 440
37 3300013296 Ga0157374_10026834 Ga0157374_100268341 440
38 3300013306 Ga0163162_10012458 Ga0163162_100124581 440
39 3300014325 Ga0163163_10079355 Ga0163163_100793552 440
40 3300025263 Ga0209565_1000072 Ga0209565_100007233 440
41 3300025295 Ga0209564_1000130 Ga0209564_100013032 440
42 3300025299 Ga0209256_1000126 Ga0209256_100012632 440
43 3300025913 Ga0207695_10009068 Ga0207695_100090684 440
44 3300025914 Ga0207671_10000500 Ga0207671_1000050026 440
45 3300026023 Ga0207677_10087706 Ga0207677_100877062 440
46 3300028381 Ga0268264_10035294 Ga0268264_100352942 440
47 3300046507 Ga0495606_0000109 Ga0495606_0000109_79109_80467 441
48 3300046512 Ga0495610_0000080 Ga0495610_0000080_62789_64147 441
49 3300025913 Ga0207695_10022859 Ga0207695_100228593 442
50 3300009093 Ga0105240_10000236 Ga0105240_1000023614 443
51 3300025913 Ga0207695_10001342 Ga0207695_1000134223 443
52 3300003320 rootH2_10009642 rootH2_1000964229 444
53 3300006871 Ga0075434_100080063 Ga0075434_1000800635 444
54 3300028379 Ga0268266_10068030 Ga0268266_100680302 444
55 3300048908 Ga0496105_0003088 Ga0496105_0003088_2455_3903 444
56 3300048922 Ga0496119_0000029 Ga0496119_0000029_120967_122415 444
57 3300048923 Ga0496120_0000039 Ga0496120_0000039_79823_81271 444
58 3300009093 Ga0105240_10014690 Ga0105240_100146902 445
59 3300009545 Ga0105237_10043484 Ga0105237_100434842 445
60 3300013296 Ga0157374_10158544 Ga0157374_101585442 445
61 3300009148 Ga0105243_10005703 Ga0105243_100057033 446
62 3300009545 Ga0105237_10091514 Ga0105237_100915141 446
63 3300025935 Ga0207709_10003795 Ga0207709_100037954 446
64 3300047472 Ga0495686_0004974 Ga0495686_0004974_3308_4651 446
65 3300026088 Ga0207641_10242343 Ga0207641_102423432 447
66 3300048922 Ga0496119_0002565 Ga0496119_0002565_9786_11297 447
67 3300048923 Ga0496120_0000015 Ga0496120_0000015_255562_257073 447
68 3300050491 nmdc:mga00v17_333_c1 nmdc:mga00v17_333_c1_23673_25148 447
69 3300046507 Ga0495606_0000090 Ga0495606_0000090_71705_73162 448
70 3300048903 Ga0496100_0022014 Ga0496100_0022014_2369_3817 449
71 3300048904 Ga0496101_0021497 Ga0496101_0021497_1002_2450 449
72 3300048910 Ga0496107_0047376 Ga0496107_0047376_1226_2674 449
73 3300048910 Ga0496107_0051719 Ga0496107_0051719_226_1674 449
74 3300048918 Ga0496115_0025940 Ga0496115_0025940_73_1521 449
75 3300048920 Ga0496117_0041226 Ga0496117_0041226_1009_2457 449
76 3300048921 Ga0496118_0003403 Ga0496118_0003403_3140_4588 449
77 3300048924 Ga0496121_0000408 Ga0496121_0000408_68938_70386 449
78 3300048929 Ga0496126_0004410 Ga0496126_0004410_11812_13260 449
79 3300005548 Ga0070665_100003726 Ga0070665_1000037262 450
80 3300028379 Ga0268266_10003013 Ga0268266_1000301314 450
81 3300005353 Ga0070669_100006362 Ga0070669_1000063626 451
82 3300009011 Ga0105251_10001150 Ga0105251_100011504 451
83 3300025299 Ga0209256_1000127 Ga0209256_100012775 451
84 3300025735 Ga0207713_1005167 Ga0207713_10051676 451
85 3300025923 Ga0207681_10013575 Ga0207681_100135753 451
86 3300039447 Ga0436361_0703869 Ga0436361_0703869_551_1957 451
87 3300046474 Ga0495605_0001662 Ga0495605_0001662_8677_10233 451
88 3300046506 Ga0495583_0000030 Ga0495583_0000030_195651_197057 451
89 3300046507 Ga0495606_0001501 Ga0495606_0001501_1581_3137 451
90 3300047469 Ga0495673_0020013 Ga0495673_0020013_1049_2455 451
91 3300049460 Ga0495682_0009438 Ga0495682_0009438_1670_3076 451
92 3300021361 Ga0213872_10000612 Ga0213872_1000061224 452
93 3300039447 Ga0436361_0854298 Ga0436361_0854298_31275_32687 452
94 3300005548 Ga0070665_100002304 Ga0070665_10000230410 453
95 3300005548 Ga0070665_100088087 Ga0070665_1000880873 453
96 3300009545 Ga0105237_10046695 Ga0105237_100466955 453
97 3300028379 Ga0268266_10009012 Ga0268266_100090126 453
98 3300028379 Ga0268266_10029507 Ga0268266_100295072 453
99 3300048929 Ga0496126_0004796 Ga0496126_0004796_3189_4628 453
100 3300005844 Ga0068862_100052127 Ga0068862_1000521274 454
101 3300025986 Ga0207658_10004528 Ga0207658_100045286 454
102 3300028380 Ga0268265_10111731 Ga0268265_101117312 454
103 iso_pu_bacteria 2775507255 2778126553 454
104 3300005842 Ga0068858_100000653 Ga0068858_10000065332 455
105 3300026035 Ga0207703_10000437 Ga0207703_1000043711 455
106 3300033180 Ga0307510_10037921 Ga0307510_100379216 455
107 3300048928 Ga0496125_0001874 Ga0496125_0001874_26763_28220 455
108 3300048929 Ga0496126_0066179 Ga0496126_0066179_1715_3139 455
109 3300025263 Ga0209565_1007142 Ga0209565_10071422 456
110 3300025291 Ga0209675_1003183 Ga0209675_10031834 456
111 3300025294 Ga0209025_1003503 Ga0209025_100350315 456
112 3300048926 Ga0496123_0050687 Ga0496123_0050687_310_1719 456
113 3300021361 Ga0213872_10016943 Ga0213872_100169433 457
114 3300039447 Ga0436361_0329722 Ga0436361_0329722_3519_4925 457
115 3300039447 Ga0436361_0501595 Ga0436361_0501595_1310_2716 457
116 3300039447 Ga0436361_0589128 Ga0436361_0589128_297_1703 457
117 3300039447 Ga0436361_0726990 Ga0436361_0726990_2387_3820 457
118 3300046460 Ga0495638_0000062 Ga0495638_0000062_12889_14442 457
119 3300005536 Ga0070697_100045707 Ga0070697_1000457072 459
120 3300007076 Ga0075435_100129571 Ga0075435_1001295712 459
121 3300050513 nmdc:mga0rr50_173583_c1 nmdc:mga0rr50_173583_c1_81_1526 459
122 3300047472 Ga0495686_0001465 Ga0495686_0001465_19975_21417 460
123 3300003187 JGI25151J46595_10006237 JGI25151J46595_100062374 461
124 3300003781 Ga0055536_1000063 Ga0055536_100006349 461
125 3300003784 Ga0055534_1001206 Ga0055534_10012067 461
126 3300021361 Ga0213872_10007989 Ga0213872_100079892 461
127 3300025291 Ga0209675_1000065 Ga0209675_1000065148 461
128 3300025292 Ga0209676_1000044 Ga0209676_1000044149 461
129 3300025294 Ga0209025_1000147 Ga0209025_100014750 461
130 3300025295 Ga0209564_1000080 Ga0209564_1000080148 461
131 3300025295 Ga0209564_1000253 Ga0209564_100025399 461
132 3300028379 Ga0268266_10000004 Ga0268266_100000041334 463
133 3300046512 Ga0495610_0001681 Ga0495610_0001681_14475_15929 463
134 3300046557 Ga0495622_0009553 Ga0495622_0009553_1206_2759 463
135 3300046660 Ga0495625_0020804 Ga0495625_0020804_2195_3748 463
136 3300048924 Ga0496121_0000017 Ga0496121_0000017_56147_57550 463
137 3300005530 Ga0070679_100049821 Ga0070679_1000498212 466
138 3300025921 Ga0207652_10002471 Ga0207652_100024715 466
139 3300048922 Ga0496119_0017832 Ga0496119_0017832_555_2054 466
140 3300046524 Ga0495648_0015475 Ga0495648_0015475_3778_5265 467
141 3300046530 Ga0495654_0001901 Ga0495654_0001901_9249_10736 467
142 3300046538 Ga0495609_0000004 Ga0495609_0000004_141008_142495 467
143 3300047446 Ga0495679_001919 Ga0495679_001919_1208_2695 467
144 3300049459 Ga0495678_000007 Ga0495678_000007_84648_86135 467
145 3300039447 Ga0436361_0725040 Ga0436361_0725040_2091_3575 468
146 3300046472 Ga0495580_0002775 Ga0495580_0002775_6412_8118 472
147 iso_pu_bacteria 2839094727 2839098480 472
148 3300005327 Ga0070658_10054977 Ga0070658_100549773 473
149 3300009551 Ga0105238_10003140 Ga0105238_1000314010 473
150 3300025909 Ga0207705_10075935 Ga0207705_100759353 473
151 3300025924 Ga0207694_10000419 Ga0207694_1000041935 473
152 3300033180 Ga0307510_10003576 Ga0307510_1000357612 473
153 3300046458 Ga0495591_006298 Ga0495591_006298_2245_3789 473
154 3300046471 Ga0495650_0007271 Ga0495650_0007271_1204_2721 473
155 3300046474 Ga0495605_0000007 Ga0495605_0000007_138476_139993 473
156 3300046506 Ga0495583_0000007 Ga0495583_0000007_97180_98697 473
157 3300046512 Ga0495610_0003481 Ga0495610_0003481_3557_5101 473
158 3300046515 Ga0495620_0000129 Ga0495620_0000129_43492_45036 473
159 3300046542 Ga0495597_0001518 Ga0495597_0001518_7384_8928 473
160 3300046558 Ga0495633_0000020 Ga0495633_0000020_85025_86569 473
161 3300046648 Ga0495611_0002209 Ga0495611_0002209_4464_6008 473
162 3300046660 Ga0495625_0050876 Ga0495625_0050876_750_2183 473
163 3300046665 Ga0495661_0000009 Ga0495661_0000009_97455_98999 473
164 3300046692 Ga0495671_0011249 Ga0495671_0011249_1487_3031 473
165 3300046794 Ga0495589_0000748 Ga0495589_0000748_11811_13355 473
166 3300047323 Ga0495683_0000003 Ga0495683_0000003_75919_77463 473
167 3300047469 Ga0495673_0013078 Ga0495673_0013078_1337_2881 473
168 3300049460 Ga0495682_0003622 Ga0495682_0003622_1103_2656 473
169 3300005548 Ga0070665_100004451 Ga0070665_1000044519 474
170 3300010375 Ga0105239_10064406 Ga0105239_100644062 474
171 3300028379 Ga0268266_10000174 Ga0268266_1000017417 474
172 3300028379 Ga0268266_10235835 Ga0268266_102358351 474
173 iso_pu_bacteria 2547132374 2548497157 475
174 iso_pu_bacteria 2643221717 2644647479 475
175 3300013102 Ga0157371_10001115 Ga0157371_1000111521 476
176 3300025228 Ga0209672_100697 Ga0209672_10069714 476
177 3300046507 Ga0495606_0000249 Ga0495606_0000249_7484_9037 476
178 3300046694 Ga0495649_0001656 Ga0495649_0001656_11412_12965 476
179 3300048904 Ga0496101_0002782 Ga0496101_0002782_2204_3661 476
180 3300048918 Ga0496115_0001964 Ga0496115_0001964_7457_9010 476
181 3300048918 Ga0496115_0003074 Ga0496115_0003074_7191_8702 476
182 3300048929 Ga0496126_0020946 Ga0496126_0020946_3962_5515 476
183 iso_pu_bacteria 2599185359 2600224622 476
184 iso_pu_bacteria 2818991466 2819715820 476
185 3300048924 Ga0496121_0101619 Ga0496121_0101619_520_1989 477
186 3300005272 Ga0065703_1000146 Ga0065703_100014615 478
187 3300009148 Ga0105243_10000010 Ga0105243_10000010155 478
188 3300009551 Ga0105238_10001467 Ga0105238_100014677 478
189 3300013100 Ga0157373_10002770 Ga0157373_100027704 478
190 3300013104 Ga0157370_10009784 Ga0157370_100097842 478
191 3300025711 Ga0207696_1007842 Ga0207696_10078422 478
192 3300025924 Ga0207694_10000907 Ga0207694_1000090715 478
193 3300025935 Ga0207709_10000001 Ga0207709_10000001412 478
194 iso_pu_bacteria 2834641062 2834643622 478
195 3300005563 Ga0068855_100201501 Ga0068855_1002015012 479
196 3300009093 Ga0105240_10000477 Ga0105240_1000047716 479
197 3300010375 Ga0105239_10000110 Ga0105239_1000011044 479
198 3300047317 Ga0495604_0001491 Ga0495604_0001491_5760_7241 479
199 3300047444 Ga0495675_0040440 Ga0495675_0040440_259_1740 479
200 3300048905 Ga0496102_0000114 Ga0496102_0000114_23077_24579 479
201 3300048906 Ga0496103_0000429 Ga0496103_0000429_24027_25529 479
202 3300048919 Ga0496116_0000412 Ga0496116_0000412_23041_24543 479
203 3300048920 Ga0496117_0000207 Ga0496117_0000207_89732_91234 479
204 3300048921 Ga0496118_0001267 Ga0496118_0001267_14177_15679 479
205 3300048922 Ga0496119_0069705 Ga0496119_0069705_20_1522 479
206 3300048927 Ga0496124_0000210 Ga0496124_0000210_89732_91234 479
207 iso_pu_bacteria 2773857672 2774130151 479
208 iso_pu_bacteria 2919527303 2919533612 479
209 iso_pu_bacteria 2974298342 2974300521 479
210 3300003354 JGI25160J50197_1000138 JGI25160J50197_100013834 480
211 3300005262 Ga0065165_1001078 Ga0065165_10010784 480
212 3300006914 Ga0075436_100075164 Ga0075436_1000751642 480
213 3300009093 Ga0105240_10084272 Ga0105240_100842721 480
214 3300009148 Ga0105243_10037883 Ga0105243_100378834 480
215 3300013105 Ga0157369_10086030 Ga0157369_100860303 480
216 3300025302 Ga0207426_1000018 Ga0207426_1000018383 480
217 3300025935 Ga0207709_10060718 Ga0207709_100607182 480
218 3300039447 Ga0436361_0941207 Ga0436361_0941207_902_2380 480
219 3300046463 Ga0495653_0000411 Ga0495653_0000411_1674_3152 480
220 3300046491 Ga0495584_0001516 Ga0495584_0001516_9029_10513 480
221 3300046507 Ga0495606_0033199 Ga0495606_0033199_1934_3412 480
222 3300046516 Ga0495628_0120378 Ga0495628_0120378_444_1922 480
223 3300046517 Ga0495630_0020414 Ga0495630_0020414_1213_2691 480
224 3300046531 Ga0495665_0016122 Ga0495665_0016122_171_1649 480
225 3300046543 Ga0495645_0110632 Ga0495645_0110632_298_1776 480
226 3300046690 Ga0495624_0016519 Ga0495624_0016519_2721_4199 480
227 3300047319 Ga0495674_0056809 Ga0495674_0056809_1536_3014 480
228 3300047444 Ga0495675_0050558 Ga0495675_0050558_622_2100 480
229 3300048903 Ga0496100_0000149 Ga0496100_0000149_15110_16588 480
230 3300048904 Ga0496101_0000204 Ga0496101_0000204_7048_8526 480
231 3300048905 Ga0496102_0000298 Ga0496102_0000298_36731_38209 480
232 3300048906 Ga0496103_0000253 Ga0496103_0000253_11852_13330 480
233 3300048908 Ga0496105_0003478 Ga0496105_0003478_4484_5962 480
234 3300048910 Ga0496107_0037842 Ga0496107_0037842_551_2029 480
235 3300048920 Ga0496117_0000171 Ga0496117_0000171_96815_98293 480
236 3300048921 Ga0496118_0000276 Ga0496118_0000276_52171_53649 480
237 3300048924 Ga0496121_0004389 Ga0496121_0004389_16551_18029 480
238 3300048927 Ga0496124_0051301 Ga0496124_0051301_410_1885 480
239 3300048929 Ga0496126_0100029 Ga0496126_0100029_789_2267 480
240 3300050514 nmdc:mga08x19_95095_c1 nmdc:mga08x19_95095_c1_179_1621 480
241 iso_pu_bacteria 2513237166 2514053742 480
242 iso_pu_bacteria 2921643360 2921653727 480
243 3300003320 rootH2_10128022 rootH2_101280222 481
244 3300013306 Ga0163162_10009605 Ga0163162_100096056 481
245 3300014497 Ga0182008_10023124 Ga0182008_100231242 481
246 3300026067 Ga0207678_10202169 Ga0207678_102021692 481
247 3300047469 Ga0495673_0002904 Ga0495673_0002904_520_2046 481
248 iso_pu_bacteria 2600255292 2601668254 481
249 iso_pu_bacteria 2857547612 2857550471 481
250 iso_pu_bacteria 2932410948 2932411994 481
251 iso_pu_bacteria 2932416698 2932418440 481
252 iso_pu_bacteria 2739367700 2739733109 482
253 3300021361 Ga0213872_10006232 Ga0213872_100062323 483
254 3300039447 Ga0436361_0106436 Ga0436361_0106436_2220_3860 483
255 3300044666 Ga0466977_0000031 Ga0466977_0000031_5254_6801 483
256 3300048921 Ga0496118_0006870 Ga0496118_0006870_9417_10940 483
257 3300048929 Ga0496126_0000064 Ga0496126_0000064_68308_69831 483
258 3300005536 Ga0070697_100012724 Ga0070697_1000127247 484
259 iso_pu_bacteria 2808606384 2808969590 484
260 iso_pu_bacteria 2808606390 2809004766 484
261 iso_pu_bacteria 2808606391 2809011295 484
262 3300009036 Ga0105244_10002796 Ga0105244_1000279610 485
263 3300009177 Ga0105248_10019815 Ga0105248_100198154 485
264 3300017792 Ga0163161_10025019 Ga0163161_100250192 485
265 3300046674 Ga0495588_0001940 Ga0495588_0001940_584_2041 485
266 3300047321 Ga0495676_0000540 Ga0495676_0000540_7097_8554 485
267 3300048089 Ga0495614_0000702 Ga0495614_0000702_1969_3426 485
268 3300048924 Ga0496121_0027579 Ga0496121_0027579_777_2234 485
269 3300048925 Ga0496122_0027800 Ga0496122_0027800_1111_2568 485
270 3300050496 nmdc:mga07m45_422_c1 nmdc:mga07m45_422_c1_9151_10638 485
271 3300053110 Ga0500571_000014 Ga0500571_000014_48681_50138 485
272 3300053122 Ga0500608_010558 Ga0500608_010558_287_1744 485
273 3300053134 Ga0500658_0000018 Ga0500658_0000018_91635_93092 485
274 3300053136 Ga0500559_0009196 Ga0500559_0009196_2024_3481 485
275 3300053153 Ga0500616_0003789 Ga0500616_0003789_8564_10021 485
276 3300053177 Ga0500636_0011903 Ga0500636_0011903_2734_4191 485
277 3300001979 JGI24740J21852_10007373 JGI24740J21852_100073734 486

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

349

529

0.94

PF02321

OEP

Outer membrane efflux protein

123

319

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5azp-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8444 19 478
5azs-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8433 19 472
5azp-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8426 19 478
5azs-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8415 19 472
5azs-assembly1.cif.gz_C crystal structure of a membrane protein from pseudomonas aeruginosa 0.8393 19 475
ID Description Score Start End Superfamily
2f1mC03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9432 186 252 1.10.287.470
1vf7M03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9387 193 249 1.10.287.470
1vf7L03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9348 193 249 1.10.287.470
1vf7B03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9335 193 249 1.10.287.470
1vf7C03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9284 193 249 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A5R8QRI2-F1-model_v4 deleted 0.9145 289 475
AF-A0A0B8P6F3-F1-model_v4 RND efflux system, outer membrane lipoprotein cmeC 0.904 137 478 GO:0009279
GO:0015562
AF-A0A6L7JTN8-F1-model_v4 deleted 0.8883 175 480
AF-A0A3S0CAC0-F1-model_v4 Efflux transporter outer membrane subunit 0.876 128 481 GO:0005886
GO:0015562
AF-A0A3D4XQ36-F1-model_v4 Efflux transporter outer membrane subunit 0.8749 17 475 GO:0009279
GO:0015562

Feature Viewer

pLDDT pTM Quality
82.35 0.78 High
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Predicted Structure (AlphaFold2)

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