F381746

General Info

Members Datasets Scaffolds Average Seq Length
277 219 554 489

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10002580|Ga0105247_100025806
Length 537
Sequence MRHATGHRGNGGAVARVIVIGAGVGGLACAARLAAAGHRVEVHERAATVGGKLGTAAIDGYTFDTGPSLLTMPWVFEDLFAATGDGLREVLAVRRLEEIARYRFADGTRLRAHADDAAFTAELDAVLGPGAGASWGRLMERAGRMWRATEGPFLSQPLAGASTLLRLAARSPRDIAVIAPTRTLRQLGSTMLRGPGAAELRMMLDRYATYTGSDPRRAPAALAVIPYAERAFGGWYIDGGLRALADALADRAREHGAEIVTGSEVTAIRLRGGRTVGVTLGDGTPRPADAVVANADAGTVWRDLLPARGSPPRSRRRGWTAPGRDARCEPSLAGFVLLLALEPGAPRPGAQHTVLFPADYDAEFDAVFGGRMPADPTVYISAPADPALAPPGGQAWFVLVNAPRHVPAGGLRALAGGPAGGDRRAGVDWDMPGRASAYADHVLDLMASRGLDVRCHLRHRRILTPADTERATATPGGAIYGTSSNGPAAAFLRPANATGVGGLFLVGGSSHPGGGLPLVTLSAKIVTGLVQDWLAGR

Samples

Sample ID Description Type Environment
1 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
110 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
111 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
145 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
146 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
147 2501939600 Micromonospora sp. L5 Isolate Unclassified
148 2508501039 Frankia saprophytica CN3 Isolate Nodule
149 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
150 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
151 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
152 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
153 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
154 2517572101 Frankia sp. DC12 Isolate Nodule
155 2527291627 Frankia casuarinae Thr Isolate Nodule
156 2527291629 Frankia sp. BMG5.23 Isolate Nodule
157 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
158 2576861822 Frankia sp. CeD Isolate Nodule
159 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
160 2619618881 Frankia sp. ACN1ag Isolate Unclassified
161 2619619003 Frankia sp. CpI1-P Isolate Nodule
162 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
163 2626541554 Frankia sp. AvcI.1 Isolate Nodule
164 2643221679 Angustibacter sp. Root456 Isolate Unclassified
165 2671180195 Frankia sp. CcI49 Isolate Nodule
166 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
167 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
168 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
169 2684623036 Frankia sp. CgIM4 Isolate Nodule
170 2687453737 Frankia sp. BMG5.36 Isolate Nodule
171 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
172 2710264753 Frankia sp. KB5 Isolate Nodule
173 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
174 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
175 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
176 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
177 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
178 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
179 2773857922 Frankia sp. CcI49 Isolate Nodule
180 2773857924 Frankia sp. CgIS1 Isolate Nodule
181 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
182 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
183 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
184 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
185 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
186 2855683550 Micromonospora sp. RP3T Isolate Unclassified
187 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
188 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
189 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
190 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
191 2858882152 Micromonospora noduli MED15 Isolate Nodule
192 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
193 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
194 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
195 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
196 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
197 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
198 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
199 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
200 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
201 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
202 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
203 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
204 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
205 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
206 2902582711 Micromonospora sp. AP08 Isolate Unclassified
207 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
208 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
209 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
210 637000116 Frankia casuarinae CcI3 Isolate Nodule
211 649633069 Micromonospora sp. L5 Isolate Unclassified
212 8002784119 Frankia sp. AgB1.9 Isolate Nodule
213 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
214 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
215 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
216 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
217 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
218 8054920844 Frankia tisae Agncl-8 Isolate Nodule
219 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 73.65
Metatranscriptomes 0
Isolates 26.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.17
Nodule 9.39
Rhizoplane 8.66
Rhizosphere 61.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105247_10002580 3300009101 Bacteria 12268
2 Ga0070658_10006251 3300005327 Bacteria 9648
3 Ga0068869_100016445 3300005334 Bacteria 4986
4 Ga0070680_100017544 3300005336 Bacteria 5645
5 Ga0070682_100035547 3300005337 Bacteria 3042
6 Ga0068868_100209830 3300005338 Bacteria 1627
7 Ga0070660_100055051 3300005339 Bacteria 3073
8 Ga0070689_100090653 3300005340 Bacteria 2409
9 Ga0070692_10014795 3300005345 Bacteria 3674
10 Ga0070668_100008727 3300005347 Bacteria 7528
11 Ga0070671_100000962 3300005355 Bacteria 21083
12 Ga0070659_100054087 3300005366 Bacteria 3161
13 Ga0070709_10049612 3300005434 Bacteria 2626
14 Ga0070714_100007761 3300005435 Bacteria 8358
15 Ga0070713_100024130 3300005436 Bacteria 4732
16 Ga0070711_100103074 3300005439 Bacteria 2079
17 Ga0070663_100017051 3300005455 Bacteria 4731
18 Ga0070679_100046156 3300005530 Bacteria 4342
19 Ga0070684_100014281 3300005535 Bacteria 6428
20 Ga0070684_100054633 3300005535 Bacteria 3480
21 Ga0070696_100040024 3300005546 Bacteria 3236
22 Ga0070693_100076955 3300005547 Bacteria 1979
23 Ga0070665_100091517 3300005548 Bacteria 3046
24 Ga0070664_100001407 3300005564 Bacteria 19217
25 Ga0068857_100080649 3300005577 Bacteria 2906
26 Ga0068857_100138359 3300005577 Bacteria 2200
27 Ga0068854_100084405 3300005578 Bacteria 2350
28 Ga0068856_100230410 3300005614 Bacteria 1868
29 Ga0070702_100010683 3300005615 Bacteria 4534
30 Ga0070702_100022401 3300005615 Bacteria 3339
31 Ga0068852_100047875 3300005616 Bacteria 3651
32 Ga0068859_100000042 3300005617 Bacteria 158982
33 Ga0068859_100000814 3300005617 Bacteria 31733
34 Ga0068859_100039517 3300005617 Bacteria 4733
35 Ga0068864_100005817 3300005618 Bacteria 10111
36 Ga0068861_100060551 3300005719 Bacteria 2902
37 Ga0068851_10025475 3300005834 Bacteria 2902
38 Ga0068863_100001046 3300005841 Bacteria 27696
39 Ga0068858_100000036 3300005842 Bacteria 138467
40 Ga0068858_100018312 3300005842 Bacteria 6558
41 Ga0068858_100037065 3300005842 Bacteria 4520
42 Ga0068860_100068955 3300005843 Bacteria 3361
43 Ga0068862_100005142 3300005844 Bacteria 10999
44 Ga0081455_10002250 3300005937 Bacteria 22976
45 Ga0081455_10009254 3300005937 Bacteria 10145
46 Ga0081538_10000003 3300005981 Bacteria 211728
47 Ga0081540_1002572 3300005983 Bacteria 14727
48 Ga0081539_10005753 3300005985 Bacteria 12379
49 Ga0081539_10009625 3300005985 Bacteria 8021
50 Ga0070717_10018401 3300006028 Bacteria 5454
51 Ga0070712_100022289 3300006175 Bacteria 4171
52 Ga0068871_100076113 3300006358 Bacteria 2771
53 Ga0075428_100082501 3300006844 Bacteria 3508
54 Ga0075428_100222669 3300006844 Bacteria 2037
55 Ga0075433_10033418 3300006852 Bacteria 4409
56 Ga0075434_100053732 3300006871 Bacteria 4002
57 Ga0075429_100080780 3300006880 Bacteria 2835
58 Ga0075436_100007423 3300006914 Bacteria 7496
59 Ga0097620_100000042 3300006931 Bacteria 158982
60 Ga0097620_100000814 3300006931 Bacteria 31733
61 Ga0097620_100039516 3300006931 Bacteria 4733
62 Ga0075435_100002284 3300007076 Bacteria 12659
63 Ga0105245_10024608 3300009098 Bacteria 5289
64 Ga0105245_10058813 3300009098 Bacteria 3460
65 Ga0105247_10000041 3300009101 Bacteria 158571
66 Ga0105247_10033891 3300009101 Bacteria 3108
67 Ga0114129_10182359 3300009147 Bacteria 2856
68 Ga0114129_10264378 3300009147 Bacteria 2304
69 Ga0105241_10067934 3300009174 Bacteria 2760
70 Ga0105248_10000153 3300009177 Bacteria 80607
71 Ga0105248_10034174 3300009177 Bacteria 5684
72 Ga0105237_10114480 3300009545 Bacteria 2690
73 Ga0105246_10007064 3300011119 Bacteria 6873
74 Ga0157373_10097862 3300013100 Bacteria 2065
75 Ga0157370_10141434 3300013104 Bacteria 2242
76 Ga0157374_10026879 3300013296 Bacteria 5183
77 Ga0157372_10149017 3300013307 Bacteria 2699
78 Ga0163163_10004570 3300014325 Bacteria 11814
79 Ga0163163_10019895 3300014325 Bacteria 6314
80 Ga0157377_10018317 3300014745 Bacteria 3637
81 Ga0157379_10000062 3300014968 Bacteria 68612
82 Ga0157379_10003627 3300014968 Bacteria 13100
83 Ga0157379_10208338 3300014968 Bacteria 1769
84 Ga0207710_10000012 3300025900 Bacteria 409603
85 Ga0207710_10000038 3300025900 Bacteria 241794
86 Ga0207688_10012032 3300025901 Bacteria 4708
87 Ga0207647_10018727 3300025904 Bacteria 4674
88 Ga0207645_10022738 3300025907 Bacteria 4075
89 Ga0207643_10001144 3300025908 Bacteria 15739
90 Ga0207705_10021019 3300025909 Bacteria 4657
91 Ga0207684_10092905 3300025910 Bacteria 2572
92 Ga0207654_10095274 3300025911 Bacteria 1823
93 Ga0207693_10044374 3300025915 Bacteria 3494
94 Ga0207663_10069998 3300025916 Bacteria 2259
95 Ga0207657_10037208 3300025919 Bacteria 4348
96 Ga0207649_10020238 3300025920 Bacteria 3813
97 Ga0207650_10036916 3300025925 Bacteria 3557
98 Ga0207659_10037953 3300025926 Bacteria 3348
99 Ga0207659_10117104 3300025926 Bacteria 2035
100 Ga0207644_10042028 3300025931 Bacteria 3237
101 Ga0207670_10043620 3300025936 Bacteria 2963
102 Ga0207691_10088259 3300025940 Bacteria 2781
103 Ga0207711_10001205 3300025941 Bacteria 24479
104 Ga0207689_10006172 3300025942 Bacteria 10606
105 Ga0207689_10006554 3300025942 Bacteria 10271
106 Ga0207661_10004996 3300025944 Bacteria 9298
107 Ga0207679_10064279 3300025945 Bacteria 2742
108 Ga0207668_10003552 3300025972 Bacteria 9164
109 Ga0207640_10047833 3300025981 Bacteria 2762
110 Ga0207640_10057272 3300025981 Bacteria 2562
111 Ga0207677_10043830 3300026023 Bacteria 2977
112 Ga0207677_10165193 3300026023 Bacteria 1724
113 Ga0207703_10000063 3300026035 Bacteria 127040
114 Ga0207703_10011749 3300026035 Bacteria 6814
115 Ga0207678_10003462 3300026067 Bacteria 14206
116 Ga0207678_10004415 3300026067 Bacteria 12653
117 Ga0207702_10003224 3300026078 Bacteria 15071
118 Ga0207702_10010274 3300026078 Bacteria 7842
119 Ga0207702_10109543 3300026078 Bacteria 2452
120 Ga0207641_10001285 3300026088 Bacteria 24995
121 Ga0207641_10080501 3300026088 Bacteria 2826
122 Ga0207641_10137637 3300026088 Bacteria 2199
123 Ga0207676_10002994 3300026095 Bacteria 12048
124 Ga0207676_10089874 3300026095 Bacteria 2518
125 Ga0207674_10039257 3300026116 Bacteria 4909
126 Ga0207674_10204225 3300026116 Bacteria 1925
127 Ga0207675_100083902 3300026118 Bacteria 2989
128 Ga0207683_10035233 3300026121 Bacteria 4353
129 Ga0207683_10081132 3300026121 Bacteria 2879
130 Ga0207698_10038085 3300026142 Bacteria 3549
131 Ga0207698_10051131 3300026142 Bacteria 3158
132 Ga0207428_10023785 3300027907 Bacteria 5146
133 Ga0268266_10079621 3300028379 Bacteria 2853
134 Ga0268265_10003668 3300028380 Bacteria 10949
135 Ga0307515_10008871 3300028794 Bacteria 19529
136 Ga0307512_10002625 3300030522 Bacteria 22257
137 Ga0307512_10005363 3300030522 Bacteria 13410
138 Ga0307513_10018857 3300031456 Bacteria 8231
139 Ga0307513_10040773 3300031456 Bacteria 5131
140 Ga0307508_10005569 3300031616 Bacteria 11962
141 Ga0307508_10112876 3300031616 Bacteria 2318
142 Ga0316578_10041726 3300031728 Bacteria 2658
143 Ga0307516_10030026 3300031730 Bacteria 5489
144 Ga0307413_10115255 3300031824 Bacteria 1808
145 Ga0307407_10039389 3300031903 Bacteria 2628
146 Ga0307409_100025997 3300031995 Bacteria 4120
147 Ga0373951_0000217 3300035091 Bacteria 20347
148 Ga0373942_0000062 3300035207 Bacteria 22455
149 Ga0316574_0004559 3300035398 Bacteria 7277
150 Ga0373927_0022047 3300035695 Bacteria 4174
151 Ga0316584_0005784 3300036712 Bacteria 8338
152 Ga0439448_0016995 3300042005 Bacteria 2218
153 Ga0466961_0018431 3300044693 Bacteria 4490
154 Ga0466963_0102254 3300044694 Bacteria 1962
155 Ga0466957_0038300 3300044842 Bacteria 2889
156 Ga0466959_0063723 3300045049 Bacteria 2676
157 Ga0466959_0071978 3300045049 Bacteria 2503
158 Ga0466967_0001816 3300045976 Bacteria 12818
159 Ga0466967_0024200 3300045976 Bacteria 4989
160 Ga0466967_0138823 3300045976 Bacteria 2262
161 Ga0495629_0046241 3300046459 Bacteria 3053
162 Ga0495632_0042137 3300046519 Bacteria 2290
163 Ga0496100_0039513 3300048903 Bacteria 2997
164 Ga0496102_0024558 3300048905 Bacteria 5358
165 Ga0496102_0077572 3300048905 Bacteria 3057
166 Ga0496104_0012607 3300048907 Bacteria 7607
167 Ga0496104_0027648 3300048907 Bacteria 5251
168 Ga0496105_0001965 3300048908 Bacteria 14779
169 Ga0496105_0013314 3300048908 Bacteria 6527
170 Ga0496105_0087109 3300048908 Bacteria 2581
171 Ga0496106_0005694 3300048909 Bacteria 9214
172 Ga0496106_0007284 3300048909 Bacteria 8174
173 Ga0496108_0001250 3300048911 Bacteria 19874
174 Ga0496108_0008680 3300048911 Bacteria 8239
175 Ga0496109_0001212 3300048912 Bacteria 21448
176 Ga0496109_0021383 3300048912 Bacteria 5720
177 Ga0496110_0003722 3300048913 Bacteria 11745
178 Ga0496110_0010014 3300048913 Bacteria 7692
179 Ga0496111_0005634 3300048914 Bacteria 8058
180 Ga0496111_0017946 3300048914 Bacteria 4894
181 Ga0496111_0051152 3300048914 Bacteria 2982
182 Ga0496112_0006297 3300048915 Bacteria 10413
183 Ga0496113_0001032 3300048916 Bacteria 14993
184 Ga0496113_0004404 3300048916 Bacteria 8644
185 Ga0496113_0033687 3300048916 Bacteria 3732
186 Ga0496116_0000150 3300048919 Bacteria 141440
187 Ga0496118_0008565 3300048921 Bacteria 10536
188 Ga0496118_0023300 3300048921 Bacteria 5382
189 Ga0496119_0001744 3300048922 Bacteria 25348
190 Ga0496119_0003900 3300048922 Bacteria 15180
191 Ga0496119_0056733 3300048922 Bacteria 2372
192 Ga0496120_0000340 3300048923 Bacteria 77467
193 Ga0496121_0003716 3300048924 Bacteria 21401
194 Ga0496121_0015148 3300048924 Bacteria 8108
195 Ga0501068_0081822 3300049584 Bacteria 1983
196 nmdc:mga08y16_10449_c1 3300050511 Bacteria 9738
197 nmdc:mga08y16_11409_c1 3300050511 Bacteria 9337
198 Ga0495619_0018061 3300053085 Bacteria 4473
199 Ga0500644_0010255 3300053088 Bacteria 2531
200 Ga0500646_0001969 3300053090 Bacteria 5369
201 Ga0500583_0030160 3300053092 Bacteria 2373
202 Ga0500594_0006496 3300053118 Bacteria 2630
203 Ga0500652_005248 3300053131 Bacteria 4064
204 Ga0500600_0075879 3300053149 Bacteria 1831
205 2501945141 2501939600 Bacteria 6907073
206 2508675767 2508501039 Bacteria 9978592
207 2515495111 2515154088 Bacteria 5526283
208 2515719111 2515154129 Bacteria 5584369
209 2515754934 2515154137 Bacteria 5711575
210 2516083318 2515154202 Bacteria 5471270
211 2516088577 2515154203 Bacteria 5458536
212 2517763880 2517572101 Bacteria 6884336
213 2528203212 2527291627 Bacteria 5309833
214 2528213059 2527291629 Bacteria 5267418
215 2546949275 2546825537 Bacteria 5389291
216 2579748021 2576861822 Bacteria 5004595
217 2579852891 2579778521 Bacteria 7624758
218 2619854065 2619618881 Bacteria 7521104
219 2620348958 2619619003 Bacteria 7619552
220 2623590841 2622736626 Bacteria 7181580
221 2626639566 2626541554 Bacteria 7741902
222 2644446159 2643221679 Bacteria 3839507
223 2671832920 2671180195 Bacteria 9757215
224 2676200879 2675902999 Bacteria 9438463
225 2676483524 2675903059 Bacteria 8644972
226 2686537274 2684623035 Bacteria 8032739
227 2686544901 2684623036 Bacteria 5199090
228 2689957770 2687453737 Bacteria 11203906
229 2689991098 2687453743 Bacteria 8361025
230 2710602012 2710264753 Bacteria 5455564
231 2731908085 2731639228 Bacteria 4187555
232 2753037792 2751185725 Bacteria 5740550
233 2753268335 2751185782 Bacteria 11227053
234 2753325660 2751185792 Bacteria 5739090
235 2772644186 2772190715 Bacteria 6959372
236 2774845457 2773857921 Bacteria 9435764
237 2774851076 2773857922 Bacteria 9757215
238 2774863540 2773857924 Bacteria 5256821
239 2831936315 2831935698 Bacteria 5963223
240 2832010536 2832004796 Bacteria 6538017
241 2852680394 2852677369 Bacteria 3768884
242 2855676411 2855670206 Bacteria 7120389
243 2855678667 2855676851 Bacteria 7063653
244 2855686724 2855683550 Bacteria 7134265
245 2856864502 2856858025 Bacteria 7255264
246 2857289302 2857288857 Bacteria 7189066
247 2857486380 2857481737 Bacteria 4761446
248 2858855186 2858848962 Bacteria 6963058
249 2858888751 2858882152 Bacteria 7230291
250 2858889025 2858888857 Bacteria 7060307
251 2858897402 2858895516 Bacteria 7378898
252 2858905779 2858902515 Bacteria 7086037
253 2866066254 2866065130 Bacteria 6518152
254 2867303514 2867302475 Bacteria 7087181
255 2867316130 2867312974 Bacteria 7058875
256 2867320996 2867319477 Bacteria 7069771
257 2867511753 2867507094 Bacteria 6506033
258 2869051554 2869048445 Bacteria 6875584
259 2869067386 2869061728 Bacteria 7112407
260 2869075224 2869068681 Bacteria 7205615
261 2880489663 2880489317 Bacteria 7096270
262 2880496040 2880495981 Bacteria 7340502
263 2895887253 2895880812 Bacteria 11255272
264 2902583412 2902582711 Bacteria 6187705
265 2929224717 2929219909 Bacteria 6984360
266 2929232344 2929226422 Bacteria 7248583
267 2996227548 2996221748 Bacteria 6799777
268 637878729 637000116 Bacteria 5433628
269 649813970 649633069 Bacteria 6962533
270 8002790058 8002784119 Bacteria 9788632
271 8003862122 8003856774 Bacteria 7675274
272 8054707752 8054704163 Bacteria 7247792
273 8054732804 8054727385 Bacteria 7558670
274 8054739007 8054734606 Bacteria 6947278
275 8054916486 8054913762 Bacteria 7713009
276 8054922289 8054920844 Bacteria 7068637
277 8055162891 8055157932 Bacteria 6429399
278 Ga0105247_10002580
279 Ga0070658_10006251
280 Ga0068869_100016445
281 Ga0070680_100017544
282 Ga0070682_100035547
283 Ga0068868_100209830
284 Ga0070660_100055051
285 Ga0070689_100090653
286 Ga0070692_10014795
287 Ga0070668_100008727
288 Ga0070671_100000962
289 Ga0070659_100054087
290 Ga0070709_10049612
291 Ga0070714_100007761
292 Ga0070713_100024130
293 Ga0070711_100103074
294 Ga0070663_100017051
295 Ga0070679_100046156
296 Ga0070684_100014281
297 Ga0070684_100054633
298 Ga0070696_100040024
299 Ga0070693_100076955
300 Ga0070665_100091517
301 Ga0070664_100001407
302 Ga0068857_100080649
303 Ga0068857_100138359
304 Ga0068854_100084405
305 Ga0068856_100230410
306 Ga0070702_100010683
307 Ga0070702_100022401
308 Ga0068852_100047875
309 Ga0068859_100000042
310 Ga0068859_100000814
311 Ga0068859_100039517
312 Ga0068864_100005817
313 Ga0068861_100060551
314 Ga0068851_10025475
315 Ga0068863_100001046
316 Ga0068858_100000036
317 Ga0068858_100018312
318 Ga0068858_100037065
319 Ga0068860_100068955
320 Ga0068862_100005142
321 Ga0081455_10002250
322 Ga0081455_10009254
323 Ga0081538_10000003
324 Ga0081540_1002572
325 Ga0081539_10005753
326 Ga0081539_10009625
327 Ga0070717_10018401
328 Ga0070712_100022289
329 Ga0068871_100076113
330 Ga0075428_100082501
331 Ga0075428_100222669
332 Ga0075433_10033418
333 Ga0075434_100053732
334 Ga0075429_100080780
335 Ga0075436_100007423
336 Ga0097620_100000042
337 Ga0097620_100000814
338 Ga0097620_100039516
339 Ga0075435_100002284
340 Ga0105245_10024608
341 Ga0105245_10058813
342 Ga0105247_10000041
343 Ga0105247_10033891
344 Ga0114129_10182359
345 Ga0114129_10264378
346 Ga0105241_10067934
347 Ga0105248_10000153
348 Ga0105248_10034174
349 Ga0105237_10114480
350 Ga0105246_10007064
351 Ga0157373_10097862
352 Ga0157370_10141434
353 Ga0157374_10026879
354 Ga0157372_10149017
355 Ga0163163_10004570
356 Ga0163163_10019895
357 Ga0157377_10018317
358 Ga0157379_10000062
359 Ga0157379_10003627
360 Ga0157379_10208338
361 Ga0207710_10000012
362 Ga0207710_10000038
363 Ga0207688_10012032
364 Ga0207647_10018727
365 Ga0207645_10022738
366 Ga0207643_10001144
367 Ga0207705_10021019
368 Ga0207684_10092905
369 Ga0207654_10095274
370 Ga0207693_10044374
371 Ga0207663_10069998
372 Ga0207657_10037208
373 Ga0207649_10020238
374 Ga0207650_10036916
375 Ga0207659_10037953
376 Ga0207659_10117104
377 Ga0207644_10042028
378 Ga0207670_10043620
379 Ga0207691_10088259
380 Ga0207711_10001205
381 Ga0207689_10006172
382 Ga0207689_10006554
383 Ga0207661_10004996
384 Ga0207679_10064279
385 Ga0207668_10003552
386 Ga0207640_10047833
387 Ga0207640_10057272
388 Ga0207677_10043830
389 Ga0207677_10165193
390 Ga0207703_10000063
391 Ga0207703_10011749
392 Ga0207678_10003462
393 Ga0207678_10004415
394 Ga0207702_10003224
395 Ga0207702_10010274
396 Ga0207702_10109543
397 Ga0207641_10001285
398 Ga0207641_10080501
399 Ga0207641_10137637
400 Ga0207676_10002994
401 Ga0207676_10089874
402 Ga0207674_10039257
403 Ga0207674_10204225
404 Ga0207675_100083902
405 Ga0207683_10035233
406 Ga0207683_10081132
407 Ga0207698_10038085
408 Ga0207698_10051131
409 Ga0207428_10023785
410 Ga0268266_10079621
411 Ga0268265_10003668
412 Ga0307515_10008871
413 Ga0307512_10002625
414 Ga0307512_10005363
415 Ga0307513_10018857
416 Ga0307513_10040773
417 Ga0307508_10005569
418 Ga0307508_10112876
419 Ga0316578_10041726
420 Ga0307516_10030026
421 Ga0307413_10115255
422 Ga0307407_10039389
423 Ga0307409_100025997
424 Ga0373951_0000217
425 Ga0373942_0000062
426 Ga0316574_0004559
427 Ga0373927_0022047
428 Ga0316584_0005784
429 Ga0439448_0016995
430 Ga0466961_0018431
431 Ga0466963_0102254
432 Ga0466957_0038300
433 Ga0466959_0063723
434 Ga0466959_0071978
435 Ga0466967_0001816
436 Ga0466967_0024200
437 Ga0466967_0138823
438 Ga0495629_0046241
439 Ga0495632_0042137
440 Ga0496100_0039513
441 Ga0496102_0024558
442 Ga0496102_0077572
443 Ga0496104_0012607
444 Ga0496104_0027648
445 Ga0496105_0001965
446 Ga0496105_0013314
447 Ga0496105_0087109
448 Ga0496106_0005694
449 Ga0496106_0007284
450 Ga0496108_0001250
451 Ga0496108_0008680
452 Ga0496109_0001212
453 Ga0496109_0021383
454 Ga0496110_0003722
455 Ga0496110_0010014
456 Ga0496111_0005634
457 Ga0496111_0017946
458 Ga0496111_0051152
459 Ga0496112_0006297
460 Ga0496113_0001032
461 Ga0496113_0004404
462 Ga0496113_0033687
463 Ga0496116_0000150
464 Ga0496118_0008565
465 Ga0496118_0023300
466 Ga0496119_0001744
467 Ga0496119_0003900
468 Ga0496119_0056733
469 Ga0496120_0000340
470 Ga0496121_0003716
471 Ga0496121_0015148
472 Ga0501068_0081822
473 nmdc:mga08y16_10449_c1
474 nmdc:mga08y16_11409_c1
475 Ga0495619_0018061
476 Ga0500644_0010255
477 Ga0500646_0001969
478 Ga0500583_0030160
479 Ga0500594_0006496
480 Ga0500652_005248
481 Ga0500600_0075879
482 2501945141
483 2508675767
484 2515495111
485 2515719111
486 2515754934
487 2516083318
488 2516088577
489 2517763880
490 2528203212
491 2528213059
492 2546949275
493 2579748021
494 2579852891
495 2619854065
496 2620348958
497 2623590841
498 2626639566
499 2644446159
500 2671832920
501 2676200879
502 2676483524
503 2686537274
504 2686544901
505 2689957770
506 2689991098
507 2710602012
508 2731908085
509 2753037792
510 2753268335
511 2753325660
512 2772644186
513 2774845457
514 2774851076
515 2774863540
516 2831936315
517 2832010536
518 2852680394
519 2855676411
520 2855678667
521 2855686724
522 2856864502
523 2857289302
524 2857486380
525 2858855186
526 2858888751
527 2858889025
528 2858897402
529 2858905779
530 2866066254
531 2867303514
532 2867316130
533 2867320996
534 2867511753
535 2869051554
536 2869067386
537 2869075224
538 2880489663
539 2880496040
540 2895887253
541 2902583412
542 2929224717
543 2929232344
544 2996227548
545 637878729
546 649813970
547 8002790058
548 8003862122
549 8054707752
550 8054732804
551 8054739007
552 8054916486
553 8054922289
554 8055162891

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

16

84

0.92

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

19

82

0.92

PF01266

DAO

FAD dependent oxidoreductase

16

321

0.83

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

24

317

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f12-assembly1.cif.gz_A l-3-hydroxyacyl-coa dehydrogenase complexed with 3-hydroxybutyryl-coa 1.006 2 30
4j0e-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 1.006 2 31
4j0e-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 1.003 2 31
6aa8-assembly1.cif.gz_F crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with nad+ 1.001 1 30
3rqs-assembly1.cif.gz_B crystal structure of human l-3- hydroxyacyl-coa dehydrogenase (ec1.1.1.35) from mitochondria at the resolution 2.0 a, northeast structural genomics consortium target hr487, mitochondrial protein partnership 1.001 2 30
ID Description Score Start End Superfamily
af_P9WN77_2_187_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.003 2 28 3.40.50.720
af_Q2G1C9_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.002 2 29 3.40.50.720
4j0fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9971 2 31 3.40.50.720
af_Q8S1G9_1_195_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9971 2 31 3.40.50.720
af_A7YT47_359_542_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9953 2 31 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A838KDT3-F1-model_v4 Phytoene desaturase 0.9663 2 416 GO:0016117
GO:0016491
AF-A0A2G4GNL5-F1-model_v4 Amine oxidase domain-containing protein 0.9639 2 470 GO:0016117
GO:0016491
AF-A0A5B7RBY0-F1-model_v4 Phytoene desaturase 0.9637 2 469 GO:0016117
GO:0016491
AF-A0A2I2KMT5-F1-model_v4 Phytoene desaturase 0.9623 2 469 GO:0016117
GO:0016491
AF-A0A6M6J9T8-F1-model_v4 Phytoene desaturase 0.9622 2 469 GO:0016117
GO:0016491

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