F381722

General Info

Members Datasets Scaffolds Average Seq Length
277 160 554 416

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100255831|Ga0075434_1002558312
Length 442
Sequence MNRSQNNMCGVVLSPGQSVELVVERPAAGGAMIARVDRQIVLVTGAIPGERVKARIERVSKHVAFASTAAVDEPSADRREAFSDPLCGGCTYSHIAYARQLAIKSDVIADAFTRIGRIVLPAPVRVAGSAEEGYRMRARLHVRNRRVGFFREGTHEICDARISRQLLPATCDVIDRVTAVVRSLGSDAIREIELSENVDASERVVHVDATQPLDARALDAMSTLEGLTPGPHVSDRITIDGRPFTLRRHVLAFFQGNRYLLSDLVSHVSARVPLGSAVIDLYAGVGLFAVAAAALRGASVVAVEGDRVAAADLHANASAAGGQLTSVRADVEGFLRGLGGWRGGGVPRQAWDALSLSKGAAQPLEVLIVDPPRTGLSREALDGILQVRPPRLVYVSCDVATLARDARRIIDTGYTIDRIDAFDLFPNTPHVETVTVFDRDRT

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
78 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
79 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
80 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
81 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
82 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
83 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
86 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.69
Rhizosphere 95.31
Stem 0
Stem Tuber 0
Unclassified 7.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100255831 3300006871 Bacteria 1770
2 Ga0070690_100049667 3300005330 Unclassified 2675
3 Ga0070670_100046694 3300005331 Bacteria 3725
4 Ga0070689_100065544 3300005340 Unclassified 2829
5 Ga0070691_10010602 3300005341 Bacteria 4208
6 Ga0070687_100111996 3300005343 Bacteria 1546
7 Ga0070671_100147289 3300005355 Bacteria 1988
8 Ga0070705_100004319 3300005440 Bacteria 6924
9 Ga0070700_100082287 3300005441 Unclassified 2082
10 Ga0070694_100026094 3300005444 Bacteria 3784
11 Ga0070708_100100947 3300005445 Bacteria 2642
12 Ga0070663_100082908 3300005455 Bacteria 2360
13 Ga0070662_100055799 3300005457 Bacteria 2867
14 Ga0070681_10062388 3300005458 Bacteria 3701
15 Ga0070681_10148005 3300005458 Bacteria 2276
16 Ga0068867_100008742 3300005459 Bacteria 7149
17 Ga0070707_100052808 3300005468 Bacteria 3897
18 Ga0070698_100053729 3300005471 Bacteria 4093
19 Ga0070698_100095286 3300005471 Unclassified 2954
20 Ga0070699_100058568 3300005518 Bacteria 3337
21 Ga0070699_100177160 3300005518 Bacteria 1891
22 Ga0070684_100001256 3300005535 Bacteria 18193
23 Ga0070697_100006950 3300005536 Bacteria 8799
24 Ga0070697_100019885 3300005536 Bacteria 5307
25 Ga0070686_100002768 3300005544 Bacteria 9659
26 Ga0070686_100049579 3300005544 Bacteria 2665
27 Ga0070695_100001838 3300005545 Bacteria 11967
28 Ga0070695_100006527 3300005545 Bacteria 6894
29 Ga0070696_100076060 3300005546 Bacteria 2369
30 Ga0070704_100001713 3300005549 Bacteria 11957
31 Ga0070704_100011464 3300005549 Bacteria 5434
32 Ga0070704_100097808 3300005549 Bacteria 2203
33 Ga0070704_100179426 3300005549 Bacteria 1692
34 Ga0070704_100299139 3300005549 Bacteria 1340
35 Ga0070664_100001512 3300005564 Bacteria 18540
36 Ga0068854_100011151 3300005578 Bacteria 5837
37 Ga0070702_100002300 3300005615 Bacteria 8189
38 Ga0068852_100111199 3300005616 Bacteria 2491
39 Ga0068859_100014182 3300005617 Bacteria 7991
40 Ga0068859_100024078 3300005617 Bacteria 6110
41 Ga0068859_100165394 3300005617 Bacteria 2292
42 Ga0068864_100047642 3300005618 Bacteria 3682
43 Ga0068864_100087986 3300005618 Bacteria 2735
44 Ga0068864_100197616 3300005618 Bacteria 1846
45 Ga0068861_100033667 3300005719 Bacteria 3782
46 Ga0068861_100148900 3300005719 Bacteria 1918
47 Ga0068870_10063410 3300005840 Unclassified 1993
48 Ga0068858_100017424 3300005842 Bacteria 6738
49 Ga0068858_100032825 3300005842 Bacteria 4821
50 Ga0081539_10010273 3300005985 Bacteria 7643
51 Ga0068871_100222888 3300006358 Bacteria 1634
52 Ga0075433_10064287 3300006852 Bacteria 3216
53 Ga0075433_10223501 3300006852 Unclassified 1672
54 Ga0075434_100014912 3300006871 Bacteria 7435
55 Ga0075434_100305673 3300006871 Bacteria 1611
56 Ga0068865_100076817 3300006881 Bacteria 2385
57 Ga0068865_100127203 3300006881 Bacteria 1904
58 Ga0075436_100003393 3300006914 Bacteria 10911
59 Ga0075436_100106249 3300006914 Bacteria 1958
60 Ga0097620_100014181 3300006931 Bacteria 7991
61 Ga0097620_100024078 3300006931 Bacteria 6110
62 Ga0097620_100165404 3300006931 Bacteria 2292
63 Ga0075435_100000194 3300007076 Bacteria 36738
64 Ga0075435_100009423 3300007076 Bacteria 7068
65 Ga0075435_100013513 3300007076 Bacteria 6076
66 Ga0075435_100028109 3300007076 Bacteria 4408
67 Ga0075435_100037179 3300007076 Bacteria 3875
68 Ga0075435_100227708 3300007076 Bacteria 1584
69 Ga0105240_10061383 3300009093 Bacteria 4684
70 Ga0111539_10032075 3300009094 Bacteria 6381
71 Ga0105245_10108158 3300009098 Bacteria 2582
72 Ga0105247_10043617 3300009101 Bacteria 2749
73 Ga0114129_10000192 3300009147 Bacteria 68551
74 Ga0114129_10001078 3300009147 Bacteria 35880
75 Ga0114129_10003659 3300009147 Bacteria 21614
76 Ga0114129_10470355 3300009147 Unclassified 1646
77 Ga0105243_10093999 3300009148 Bacteria 2475
78 Ga0105242_10020811 3300009176 Bacteria 5145
79 Ga0105248_10026415 3300009177 Bacteria 6459
80 Ga0105248_10074572 3300009177 Bacteria 3813
81 Ga0105248_10136587 3300009177 Bacteria 2766
82 Ga0105248_10273930 3300009177 Unclassified 1900
83 Ga0105249_10091012 3300009553 Unclassified 2853
84 Ga0157374_10193949 3300013296 Bacteria 1987
85 Ga0163163_10000206 3300014325 Bacteria 60942
86 Ga0163163_10010521 3300014325 Bacteria 8324
87 Ga0163163_10127193 3300014325 Unclassified 2586
88 Ga0163163_10181143 3300014325 Bacteria 2154
89 Ga0157380_10005355 3300014326 Bacteria 8966
90 Ga0157379_10032412 3300014968 Bacteria 4659
91 Ga0157379_10078758 3300014968 Bacteria 2952
92 Ga0157376_10008346 3300014969 Bacteria 7472
93 Ga0207645_10015258 3300025907 Bacteria 5112
94 Ga0207707_10156662 3300025912 Bacteria 1992
95 Ga0207662_10060870 3300025918 Unclassified 2265
96 Ga0207646_10082810 3300025922 Bacteria 2869
97 Ga0207646_10120595 3300025922 Bacteria 2356
98 Ga0207650_10008256 3300025925 Bacteria 7108
99 Ga0207706_10045083 3300025933 Bacteria 3908
100 Ga0207711_10070812 3300025941 Unclassified 3025
101 Ga0207661_10006957 3300025944 Bacteria 8021
102 Ga0207679_10002090 3300025945 Bacteria 12396
103 Ga0207712_10065828 3300025961 Unclassified 2588
104 Ga0207640_10003402 3300025981 Bacteria 8575
105 Ga0207678_10107281 3300026067 Bacteria 2382
106 Ga0207708_10000748 3300026075 Bacteria 24397
107 Ga0207648_10075640 3300026089 Bacteria 2935
108 Ga0207648_10112638 3300026089 Bacteria 2389
109 Ga0207676_10100988 3300026095 Bacteria 2391
110 Ga0207675_100006273 3300026118 Bacteria 11284
111 Ga0207675_100066959 3300026118 Bacteria 3357
112 Ga0207698_10119598 3300026142 Bacteria 2227
113 Ga0207428_10014294 3300027907 Bacteria 6908
114 Ga0207428_10044954 3300027907 Bacteria 3561
115 Ga0307405_10119618 3300031731 Bacteria 1800
116 Ga0307413_10158175 3300031824 Bacteria 1588
117 Ga0307416_100064545 3300032002 Bacteria 3004
118 Ga0307411_10036434 3300032005 Bacteria 3082
119 Ga0373950_0006189 3300034818 Bacteria 1816
120 Ga0373958_0001558 3300034819 Bacteria 3101
121 Ga0373929_0001729 3300035085 Bacteria 4104
122 Ga0373949_0002286 3300035090 Bacteria 4985
123 Ga0373932_0000981 3300035112 Bacteria 8263
124 Ga0373941_0007226 3300035115 Bacteria 2711
125 Ga0373956_0002115 3300035119 Bacteria 8230
126 Ga0373955_0009637 3300035172 Bacteria 4534
127 Ga0373942_0006346 3300035207 Bacteria 2730
128 Ga0373961_0002729 3300035241 Bacteria 4513
129 Ga0373931_0002045 3300035691 Bacteria 8870
130 Ga0373933_0002184 3300035724 Bacteria 11197
131 Ga0373937_0000136 3300036401 Bacteria 71049
132 Ga0373937_0358387 3300036401 Bacteria 1382
133 Ga0373925_0057138 3300037068 Bacteria 2924
134 Ga0373925_0065216 3300037068 Bacteria 2743
135 Ga0439435_0033177 3300042436 Bacteria 1412
136 Ga0451576_0006662 3300045051 Bacteria 14096
137 Ga0451576_0013255 3300045051 Bacteria 9225
138 Ga0495592_0032420 3300046454 Bacteria 3942
139 Ga0495651_0100075 3300046462 Unclassified 2160
140 Ga0495580_0037375 3300046472 Bacteria 3486
141 Ga0495608_0016333 3300046511 Bacteria 5136
142 Ga0495628_0042841 3300046516 Bacteria 3608
143 Ga0495630_0079626 3300046517 Bacteria 2471
144 Ga0495652_0119553 3300046529 Bacteria 2104
145 Ga0495640_0037863 3300046533 Unclassified 3398
146 Ga0495587_0142521 3300046536 Bacteria 1367
147 Ga0495667_0037818 3300046559 Bacteria 3215
148 Ga0495634_0074252 3300046642 Bacteria 2235
149 Ga0495635_0045416 3300046663 Bacteria 3032
150 Ga0495613_0001062 3300046689 Bacteria 20990
151 Ga0495684_0000515 3300047471 Bacteria 31395
152 Ga0496101_0000530 3300048904 Bacteria 23540
153 Ga0496102_0099243 3300048905 Bacteria 2703
154 Ga0496104_0036980 3300048907 Bacteria 4565
155 Ga0496105_0027283 3300048908 Bacteria 4663
156 Ga0496108_0002599 3300048911 Bacteria 14462
157 Ga0496108_0014579 3300048911 Bacteria 6416
158 Ga0496109_0072198 3300048912 Bacteria 3170
159 Ga0496110_0098048 3300048913 Bacteria 2626
160 Ga0496112_0003047 3300048915 Bacteria 13714
161 Ga0496112_0010798 3300048915 Bacteria 8306
162 Ga0496114_0001057 3300048917 Bacteria 20697
163 Ga0496114_0076124 3300048917 Bacteria 2828
164 Ga0496115_0069651 3300048918 Unclassified 2850
165 Ga0501031_0005626 3300049568 Bacteria 8165
166 Ga0501032_0008498 3300049569 Bacteria 7486
167 Ga0501032_0013608 3300049569 Bacteria 5779
168 Ga0501033_0017969 3300049570 Bacteria 5339
169 Ga0501034_0012012 3300049571 Bacteria 8950
170 Ga0501034_0017211 3300049571 Bacteria 7415
171 Ga0501034_0030970 3300049571 Bacteria 5436
172 Ga0501034_0196109 3300049571 Bacteria 1979
173 Ga0501034_0257206 3300049571 Bacteria 1689
174 Ga0501036_0011937 3300049572 Bacteria 7202
175 Ga0501036_0052243 3300049572 Bacteria 3461
176 Ga0501037_0004178 3300049573 Bacteria 10469
177 Ga0501037_0005492 3300049573 Bacteria 9243
178 Ga0501037_0005624 3300049573 Bacteria 9137
179 Ga0501037_0025869 3300049573 Bacteria 4334
180 Ga0501038_0012416 3300049574 Bacteria 7787
181 Ga0501038_0038133 3300049574 Bacteria 4209
182 Ga0501038_0144526 3300049574 Bacteria 1943
183 Ga0501038_0264546 3300049574 Bacteria 1358
184 Ga0501039_0007080 3300049575 Bacteria 8545
185 Ga0501039_0062978 3300049575 Bacteria 2874
186 Ga0501040_0008644 3300049576 Bacteria 6613
187 Ga0501042_0031129 3300049578 Bacteria 3775
188 Ga0501043_0001682 3300049579 Bacteria 19204
189 Ga0501043_0024591 3300049579 Bacteria 4726
190 Ga0501043_0051217 3300049579 Bacteria 3244
191 Ga0501043_0063186 3300049579 Bacteria 2907
192 Ga0501043_0076638 3300049579 Unclassified 2627
193 Ga0501046_0037414 3300049580 Bacteria 3899
194 Ga0501046_0076226 3300049580 Bacteria 2598
195 Ga0501046_0123302 3300049580 Unclassified 1970
196 Ga0501047_0001367 3300049581 Bacteria 23956
197 Ga0501047_0017791 3300049581 Bacteria 6808
198 Ga0501047_0034914 3300049581 Bacteria 4855
199 Ga0501047_0041963 3300049581 Bacteria 4421
200 Ga0501047_0096048 3300049581 Unclassified 2842
201 Ga0501048_0003570 3300049582 Bacteria 11837
202 Ga0501048_0020346 3300049582 Bacteria 4864
203 Ga0501048_0031287 3300049582 Bacteria 3850
204 Ga0501048_0053889 3300049582 Bacteria 2858
205 Ga0501048_0076790 3300049582 Bacteria 2357
206 Ga0501067_0000172 3300049583 Bacteria 36346
207 Ga0501067_0012539 3300049583 Bacteria 4703
208 Ga0501067_0030935 3300049583 Bacteria 2970
209 Ga0501067_0113708 3300049583 Bacteria 1505
210 Ga0501068_0007379 3300049584 Bacteria 6089
211 Ga0501068_0016949 3300049584 Bacteria 4208
212 Ga0501069_0006454 3300049585 Bacteria 6133
213 Ga0501069_0074609 3300049585 Bacteria 1903
214 Ga0501070_0048067 3300049586 Bacteria 3544
215 Ga0501072_0026677 3300049588 Bacteria 4505
216 Ga0501072_0043396 3300049588 Bacteria 3534
217 Ga0501072_0170789 3300049588 Bacteria 1735
218 Ga0501073_0009032 3300049589 Bacteria 7358
219 Ga0501073_0019572 3300049589 Bacteria 4884
220 Ga0501073_0023168 3300049589 Bacteria 4462
221 Ga0501073_0030398 3300049589 Bacteria 3856
222 Ga0501073_0032143 3300049589 Bacteria 3743
223 Ga0501073_0107309 3300049589 Unclassified 1937
224 Ga0501074_0001301 3300049590 Bacteria 16561
225 Ga0501074_0010804 3300049590 Bacteria 6630
226 Ga0501075_0057051 3300049591 Bacteria 2940
227 Ga0501075_0159591 3300049591 Unclassified 1720
228 Ga0501076_0000425 3300049592 Bacteria 26599
229 Ga0501076_0009440 3300049592 Bacteria 7206
230 Ga0501077_0075738 3300049593 Bacteria 2131
231 Ga0501079_0004158 3300049741 Bacteria 10724
232 Ga0501079_0005447 3300049741 Bacteria 9484
233 Ga0501079_0047575 3300049741 Bacteria 3309
234 Ga0501080_0002731 3300049742 Bacteria 15484
235 Ga0501080_0020159 3300049742 Bacteria 6171
236 Ga0501080_0061708 3300049742 Bacteria 3489
237 Ga0501080_0221048 3300049742 Bacteria 1733
238 Ga0501083_0000427 3300049744 Bacteria 27115
239 Ga0501083_0006734 3300049744 Bacteria 8152
240 Ga0501083_0064308 3300049744 Bacteria 2445
241 Ga0501083_0115945 3300049744 Bacteria 1758
242 Ga0501035_0002531 3300049822 Bacteria 17868
243 Ga0501044_0002518 3300049823 Bacteria 20880
244 Ga0501044_0023244 3300049823 Bacteria 6595
245 Ga0501044_0023830 3300049823 Bacteria 6505
246 Ga0501044_0088339 3300049823 Bacteria 3129
247 Ga0501045_0008236 3300049824 Bacteria 7259
248 Ga0501045_0038857 3300049824 Bacteria 3462
249 nmdc:mga05p37_353436_c1 3300050507 Bacteria 1730
250 nmdc:mga05p37_35431_c1 3300050507 Bacteria 6119
251 nmdc:mga05p37_81320_c1 3300050507 Bacteria 3991
252 nmdc:mga05p37_8953_c1 3300050507 Bacteria 11838
253 nmdc:mga08y16_11800_c1 3300050511 Bacteria 9179
254 nmdc:mga08y16_138776_c1 3300050511 Bacteria 2527
255 nmdc:mga08y16_6254_c1 3300050511 Bacteria 12484
256 nmdc:mga0n895_165084_c1 3300050512 Bacteria 2246
257 nmdc:mga0n895_296598_c1 3300050512 Bacteria 1639
258 nmdc:mga0n895_399_c1 3300050512 Bacteria 29189
259 nmdc:mga0n895_4609_c1 3300050512 Bacteria 11361
260 nmdc:mga0rr50_2_c1 3300050513 Bacteria 373938
261 nmdc:mga0rr50_52859_c1 3300050513 Bacteria 3020
262 nmdc:mga0rr50_95845_c1 3300050513 Bacteria 2320
263 nmdc:mga08x19_230_c1 3300050514 Bacteria 42633
264 nmdc:mga0a205_251032_c1 3300050515 Unclassified 1648
265 nmdc:mga0a205_42759_c1 3300050515 Bacteria 4366
266 Ga0495601_0031757 3300053077 Bacteria 3283
267 Ga0495619_0003589 3300053085 Bacteria 9999
268 Ga0501084_0003826 3300054114 Bacteria 12241
269 Ga0501084_0041500 3300054114 Bacteria 3849
270 Ga0501084_0111363 3300054114 Bacteria 2301
271 Ga0590074_012390 3300059423 Bacteria 1434
272 Ga0590075_000815 3300059424 Bacteria 8188
273 Ga0590077_000760 3300059426 Bacteria 8438
274 Ga0501082_0020787 3300060353 Bacteria 5660
275 Ga0501082_0043564 3300060353 Bacteria 3870
276 Ga0501082_0193996 3300060353 Bacteria 1766
277 Ga0530510_0105477 3300061734 Bacteria 2062
278 Ga0075434_100255831
279 Ga0070690_100049667
280 Ga0070670_100046694
281 Ga0070689_100065544
282 Ga0070691_10010602
283 Ga0070687_100111996
284 Ga0070671_100147289
285 Ga0070705_100004319
286 Ga0070700_100082287
287 Ga0070694_100026094
288 Ga0070708_100100947
289 Ga0070663_100082908
290 Ga0070662_100055799
291 Ga0070681_10062388
292 Ga0070681_10148005
293 Ga0068867_100008742
294 Ga0070707_100052808
295 Ga0070698_100053729
296 Ga0070698_100095286
297 Ga0070699_100058568
298 Ga0070699_100177160
299 Ga0070684_100001256
300 Ga0070697_100006950
301 Ga0070697_100019885
302 Ga0070686_100002768
303 Ga0070686_100049579
304 Ga0070695_100001838
305 Ga0070695_100006527
306 Ga0070696_100076060
307 Ga0070704_100001713
308 Ga0070704_100011464
309 Ga0070704_100097808
310 Ga0070704_100179426
311 Ga0070704_100299139
312 Ga0070664_100001512
313 Ga0068854_100011151
314 Ga0070702_100002300
315 Ga0068852_100111199
316 Ga0068859_100014182
317 Ga0068859_100024078
318 Ga0068859_100165394
319 Ga0068864_100047642
320 Ga0068864_100087986
321 Ga0068864_100197616
322 Ga0068861_100033667
323 Ga0068861_100148900
324 Ga0068870_10063410
325 Ga0068858_100017424
326 Ga0068858_100032825
327 Ga0081539_10010273
328 Ga0068871_100222888
329 Ga0075433_10064287
330 Ga0075433_10223501
331 Ga0075434_100014912
332 Ga0075434_100305673
333 Ga0068865_100076817
334 Ga0068865_100127203
335 Ga0075436_100003393
336 Ga0075436_100106249
337 Ga0097620_100014181
338 Ga0097620_100024078
339 Ga0097620_100165404
340 Ga0075435_100000194
341 Ga0075435_100009423
342 Ga0075435_100013513
343 Ga0075435_100028109
344 Ga0075435_100037179
345 Ga0075435_100227708
346 Ga0105240_10061383
347 Ga0111539_10032075
348 Ga0105245_10108158
349 Ga0105247_10043617
350 Ga0114129_10000192
351 Ga0114129_10001078
352 Ga0114129_10003659
353 Ga0114129_10470355
354 Ga0105243_10093999
355 Ga0105242_10020811
356 Ga0105248_10026415
357 Ga0105248_10074572
358 Ga0105248_10136587
359 Ga0105248_10273930
360 Ga0105249_10091012
361 Ga0157374_10193949
362 Ga0163163_10000206
363 Ga0163163_10010521
364 Ga0163163_10127193
365 Ga0163163_10181143
366 Ga0157380_10005355
367 Ga0157379_10032412
368 Ga0157379_10078758
369 Ga0157376_10008346
370 Ga0207645_10015258
371 Ga0207707_10156662
372 Ga0207662_10060870
373 Ga0207646_10082810
374 Ga0207646_10120595
375 Ga0207650_10008256
376 Ga0207706_10045083
377 Ga0207711_10070812
378 Ga0207661_10006957
379 Ga0207679_10002090
380 Ga0207712_10065828
381 Ga0207640_10003402
382 Ga0207678_10107281
383 Ga0207708_10000748
384 Ga0207648_10075640
385 Ga0207648_10112638
386 Ga0207676_10100988
387 Ga0207675_100006273
388 Ga0207675_100066959
389 Ga0207698_10119598
390 Ga0207428_10014294
391 Ga0207428_10044954
392 Ga0307405_10119618
393 Ga0307413_10158175
394 Ga0307416_100064545
395 Ga0307411_10036434
396 Ga0373950_0006189
397 Ga0373958_0001558
398 Ga0373929_0001729
399 Ga0373949_0002286
400 Ga0373932_0000981
401 Ga0373941_0007226
402 Ga0373956_0002115
403 Ga0373955_0009637
404 Ga0373942_0006346
405 Ga0373961_0002729
406 Ga0373931_0002045
407 Ga0373933_0002184
408 Ga0373937_0000136
409 Ga0373937_0358387
410 Ga0373925_0057138
411 Ga0373925_0065216
412 Ga0439435_0033177
413 Ga0451576_0006662
414 Ga0451576_0013255
415 Ga0495592_0032420
416 Ga0495651_0100075
417 Ga0495580_0037375
418 Ga0495608_0016333
419 Ga0495628_0042841
420 Ga0495630_0079626
421 Ga0495652_0119553
422 Ga0495640_0037863
423 Ga0495587_0142521
424 Ga0495667_0037818
425 Ga0495634_0074252
426 Ga0495635_0045416
427 Ga0495613_0001062
428 Ga0495684_0000515
429 Ga0496101_0000530
430 Ga0496102_0099243
431 Ga0496104_0036980
432 Ga0496105_0027283
433 Ga0496108_0002599
434 Ga0496108_0014579
435 Ga0496109_0072198
436 Ga0496110_0098048
437 Ga0496112_0003047
438 Ga0496112_0010798
439 Ga0496114_0001057
440 Ga0496114_0076124
441 Ga0496115_0069651
442 Ga0501031_0005626
443 Ga0501032_0008498
444 Ga0501032_0013608
445 Ga0501033_0017969
446 Ga0501034_0012012
447 Ga0501034_0017211
448 Ga0501034_0030970
449 Ga0501034_0196109
450 Ga0501034_0257206
451 Ga0501036_0011937
452 Ga0501036_0052243
453 Ga0501037_0004178
454 Ga0501037_0005492
455 Ga0501037_0005624
456 Ga0501037_0025869
457 Ga0501038_0012416
458 Ga0501038_0038133
459 Ga0501038_0144526
460 Ga0501038_0264546
461 Ga0501039_0007080
462 Ga0501039_0062978
463 Ga0501040_0008644
464 Ga0501042_0031129
465 Ga0501043_0001682
466 Ga0501043_0024591
467 Ga0501043_0051217
468 Ga0501043_0063186
469 Ga0501043_0076638
470 Ga0501046_0037414
471 Ga0501046_0076226
472 Ga0501046_0123302
473 Ga0501047_0001367
474 Ga0501047_0017791
475 Ga0501047_0034914
476 Ga0501047_0041963
477 Ga0501047_0096048
478 Ga0501048_0003570
479 Ga0501048_0020346
480 Ga0501048_0031287
481 Ga0501048_0053889
482 Ga0501048_0076790
483 Ga0501067_0000172
484 Ga0501067_0012539
485 Ga0501067_0030935
486 Ga0501067_0113708
487 Ga0501068_0007379
488 Ga0501068_0016949
489 Ga0501069_0006454
490 Ga0501069_0074609
491 Ga0501070_0048067
492 Ga0501072_0026677
493 Ga0501072_0043396
494 Ga0501072_0170789
495 Ga0501073_0009032
496 Ga0501073_0019572
497 Ga0501073_0023168
498 Ga0501073_0030398
499 Ga0501073_0032143
500 Ga0501073_0107309
501 Ga0501074_0001301
502 Ga0501074_0010804
503 Ga0501075_0057051
504 Ga0501075_0159591
505 Ga0501076_0000425
506 Ga0501076_0009440
507 Ga0501077_0075738
508 Ga0501079_0004158
509 Ga0501079_0005447
510 Ga0501079_0047575
511 Ga0501080_0002731
512 Ga0501080_0020159
513 Ga0501080_0061708
514 Ga0501080_0221048
515 Ga0501083_0000427
516 Ga0501083_0006734
517 Ga0501083_0064308
518 Ga0501083_0115945
519 Ga0501035_0002531
520 Ga0501044_0002518
521 Ga0501044_0023244
522 Ga0501044_0023830
523 Ga0501044_0088339
524 Ga0501045_0008236
525 Ga0501045_0038857
526 nmdc:mga05p37_353436_c1
527 nmdc:mga05p37_35431_c1
528 nmdc:mga05p37_81320_c1
529 nmdc:mga05p37_8953_c1
530 nmdc:mga08y16_11800_c1
531 nmdc:mga08y16_138776_c1
532 nmdc:mga08y16_6254_c1
533 nmdc:mga0n895_165084_c1
534 nmdc:mga0n895_296598_c1
535 nmdc:mga0n895_399_c1
536 nmdc:mga0n895_4609_c1
537 nmdc:mga0rr50_2_c1
538 nmdc:mga0rr50_52859_c1
539 nmdc:mga0rr50_95845_c1
540 nmdc:mga08x19_230_c1
541 nmdc:mga0a205_251032_c1
542 nmdc:mga0a205_42759_c1
543 Ga0495601_0031757
544 Ga0495619_0003589
545 Ga0501084_0003826
546 Ga0501084_0041500
547 Ga0501084_0111363
548 Ga0590074_012390
549 Ga0590075_000815
550 Ga0590077_000760
551 Ga0501082_0020787
552 Ga0501082_0043564
553 Ga0501082_0193996
554 Ga0530510_0105477

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01938

TRAM

TRAM domain

13

69

0.96

PF05958

tRNA_U5-meth_tr

tRNA (Uracil-5-)-methyltransferase

227

440

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yvc-assembly1.cif.gz_A solution structure of the conserved protein from the gene locus mmp0076 of methanococcus maripaludis. northeast structural genomics target mrr5. 0.9223 2 58
1yez-assembly1.cif.gz_A solution structure of the conserved protein from the gene locus mm1357 of methanosarcina mazei. northeast structural genomics target mar30. 0.8709 1 58
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.8547 1 413
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.8527 1 413
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.8387 4 58
ID Description Score Start End Superfamily
af_Q58074_11_77_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9491 2 58 2.40.50.140
af_O07191_4_80_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9125 1 74 2.40.50.140
af_A0A1D8PCG3_83_165_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.905 4 68 2.40.50.140
af_Q2FWZ3_2_80_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8942 1 74 2.40.50.140
af_Q8II27_675_856_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8936 243 413 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A2E1RQ27-F1-model_v4 SAM-dependent methyltransferase 0.9798 340 413 GO:0006396
GO:0008173
GO:0008757
GO:0009451
GO:0032259
AF-A0A4Y7S2T2-F1-model_v4 23S rRNA (Uracil-C(5))-methyltransferase RlmCD (EC 2.1.1.189) 0.9728 336 412 GO:0070041
GO:0070475
AF-A0A7X9GAQ5-F1-model_v4 23S rRNA (Uracil-5-)-methyltransferase RumA 0.9726 335 413 GO:0006396
GO:0008173
GO:0032259
AF-Q3S679-F1-model_v4 TrmA 0.9674 1 62
AF-A0A2V8CB76-F1-model_v4 TRAM domain-containing protein 0.9661 1 413 GO:0070041
GO:0070475

Map