F381668

General Info

Members Datasets Scaffolds Average Seq Length
277 177 261 705

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100000008|Ga0070665_100000008110
Length 743
Sequence MTGTLRHAAFYSMTSLLKIFLITLPIKTDHMQIETFYYDNRSVKWFGYATMFWSIVGMLAGLWAAIALYYPAMNLGIPATTFGRMRPVHTNAVIFAFVGNGIFMGVYYSLQRLCKARMFSDVLSKIHFWGWQLIIVIGAITLWAGKTTGKEYAELEWPVDIAIAIVWIIFGINMFGTIIKRRESHIYVAIWFAMLHIVNSVELPVSMWKSYSWYAGVQDALVQWWYGHNAVAFFLTTPYLGLMYYFLPKAANRPIYSYRLSIIHFWALIFIYIWAGPHHLLYTALPDWAQSLGVVFSIMLIAPSWGGMLNGLFTLRGAWDKVKEEPVLKFLVVAITCYGMATFEGPMLSLKNVNAISHFTDWTIAHVHIGALGWNGFLTFGVLYWLVPRMWNTNLYSKKLAGTHFWVGTIGIVLYAIPLYWAGFTQSMMWKAFTDEGQLKFQFLETVTHIIPMYVTRSIGGALYIIGALLMVYNLRKTIKKGSFIADEAAEAAPLPDKIPTHGRTYWHRWIERRPMQMLVFSLIAVAIGGMIELIPTFLVKSNIPTITSVKPYTPLELHGRDIYIREGCYLCHSQMVRPFRDEVARYGEYSKAGEFVYDHPFQWGSKRTGPDLAREGGKYPDSWHYNHMMDPTSMSPGSIMPSYTWLLDRELDTSRTESMIRAMRKLGVPYPDGYAISQANKDLDAQEIAIDTALKADKIRAGRNKEIVALIAYLQRLGKDIKAAPKEQTAMKDAEGRAIMGN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
4 2818991444 Filimonas endophytica 3197 Isolate Unclassified
5 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
6 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
7 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
8 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
9 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
10 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
11 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
12 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
13 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
14 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
15 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
16 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
17 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
22 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
23 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
24 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
29 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
30 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
31 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
32 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
33 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
34 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
37 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
40 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
78 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
81 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
82 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
118 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
119 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
126 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
129 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
133 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
134 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
142 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
159 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
160 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
169 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
170 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
171 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
172 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
173 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
174 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.22
Metatranscriptomes 0
Isolates 5.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13
Nodule 0
Rhizoplane 0.72
Rhizosphere 75.09
Stem 0
Stem Tuber 0
Unclassified 11.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_577364 2162886007 Bacteria 146603
2 JGI25154J39366_1000016 3300002738 Bacteria 255057
3 rootH2_10004072 3300003320 Bacteria 38215
4 rootL2_10007636 3300003322 Bacteria 5828
5 rootL2_10007637 3300003322 Bacteria 20947
6 rootL2_10033209 3300003322 Bacteria 7191
7 rootL2_10087812 3300003322 Bacteria 5387
8 rootH1_10072787 3300003323 Bacteria 8912
9 rootH1_10116674 3300003323 Bacteria 7801
10 rootH1_10123356 3300003323 Bacteria 3356
11 JGI25160J50197_1003375 3300003354 Bacteria 7159
12 JGI25160J50197_1004748 3300003354 Bacteria 5808
13 Ga0055542_1004422 3300003762 Bacteria 3425
14 Ga0055528_1000227 3300003790 Bacteria 46980
15 Ga0055531_10000080 3300003794 Bacteria 103922
16 Ga0065165_1000514 3300005262 Bacteria 59489
17 Ga0065704_10073714 3300005289 Bacteria 6855
18 Ga0070658_10007334 3300005327 Bacteria 8903
19 Ga0070683_100011349 3300005329 Bacteria 7696
20 Ga0070683_100014988 3300005329 Bacteria 6800
21 Ga0070670_100028672 3300005331 Bacteria 4791
22 Ga0070670_100042943 3300005331 Bacteria 3887
23 Ga0070670_100078099 3300005331 Bacteria 2844
24 Ga0070666_10000026 3300005335 Bacteria 152379
25 Ga0070666_10066696 3300005335 Bacteria 2443
26 Ga0070682_100000018 3300005337 Bacteria 229427
27 Ga0070689_100056691 3300005340 Bacteria 3038
28 Ga0070661_100065592 3300005344 Bacteria 2668
29 Ga0070669_100011093 3300005353 Bacteria 6396
30 Ga0070669_100038835 3300005353 Bacteria 3457
31 Ga0070675_100067728 3300005354 Bacteria 2954
32 Ga0070674_100049869 3300005356 Bacteria 2880
33 Ga0070688_100008396 3300005365 Bacteria 5604
34 Ga0068867_100037911 3300005459 Bacteria 3506
35 Ga0070685_10012952 3300005466 Bacteria 4391
36 Ga0070684_100013556 3300005535 Bacteria 6578
37 Ga0070684_100057105 3300005535 Bacteria 3407
38 Ga0068853_100003302 3300005539 Bacteria 12344
39 Ga0068853_100006876 3300005539 Bacteria 9076
40 Ga0068853_100017360 3300005539 Bacteria 5942
41 Ga0068853_100084756 3300005539 Bacteria 2777
42 Ga0070665_100000008 3300005548 Bacteria 606341
43 Ga0070665_100018850 3300005548 Bacteria 6918
44 Ga0068855_100010734 3300005563 Bacteria 11053
45 Ga0068855_100011279 3300005563 Bacteria 10791
46 Ga0068855_100070824 3300005563 Bacteria 4056
47 Ga0070664_100055605 3300005564 Bacteria 3361
48 Ga0068857_100001350 3300005577 Bacteria 19312
49 Ga0068856_100007044 3300005614 Bacteria 10983
50 Ga0068856_100018123 3300005614 Bacteria 6827
51 Ga0068852_100071046 3300005616 Bacteria 3055
52 Ga0068859_100000047 3300005617 Bacteria 140570
53 Ga0068859_100015430 3300005617 Bacteria 7674
54 Ga0068859_100020768 3300005617 Bacteria 6591
55 Ga0068859_100025748 3300005617 Bacteria 5900
56 Ga0068864_100018279 3300005618 Bacteria 5854
57 Ga0068864_100027178 3300005618 Bacteria 4829
58 Ga0068863_100011739 3300005841 Bacteria 8472
59 Ga0068860_100000039 3300005843 Bacteria 232543
60 Ga0068860_100004547 3300005843 Bacteria 14160
61 Ga0068862_100031557 3300005844 Bacteria 4474
62 Ga0097621_100023112 3300006237 Bacteria 4836
63 Ga0097621_100025540 3300006237 Bacteria 4623
64 Ga0068871_100014990 3300006358 Bacteria 5795
65 Ga0068865_100005768 3300006881 Bacteria 7526
66 Ga0097620_100000047 3300006931 Bacteria 140570
67 Ga0097620_100015430 3300006931 Bacteria 7674
68 Ga0097620_100020768 3300006931 Bacteria 6591
69 Ga0097620_100025748 3300006931 Bacteria 5900
70 Ga0105240_10000304 3300009093 Bacteria 95162
71 Ga0105240_10002010 3300009093 Bacteria 33532
72 Ga0105240_10101011 3300009093 Bacteria 3509
73 Ga0105247_10004301 3300009101 Bacteria 9106
74 Ga0114129_10000608 3300009147 Bacteria 44314
75 Ga0105241_10025312 3300009174 Bacteria 4410
76 Ga0105242_10025921 3300009176 Bacteria 4643
77 Ga0105242_10080210 3300009176 Bacteria 2727
78 Ga0105237_10000263 3300009545 Bacteria 74133
79 Ga0105237_10000277 3300009545 Bacteria 71828
80 Ga0105237_10002099 3300009545 Bacteria 25171
81 Ga0105237_10013680 3300009545 Bacteria 8498
82 Ga0105237_10037699 3300009545 Bacteria 4885
83 Ga0105238_10013108 3300009551 Bacteria 8365
84 Ga0105238_10029648 3300009551 Bacteria 5573
85 Ga0105249_10000379 3300009553 Bacteria 44182
86 Ga0105239_10004423 3300010375 Bacteria 16811
87 Ga0105239_10024096 3300010375 Bacteria 6703
88 Ga0157373_10006994 3300013100 Bacteria 8405
89 Ga0157373_10047262 3300013100 Bacteria 3070
90 Ga0157371_10000946 3300013102 Bacteria 32431
91 Ga0157371_10019925 3300013102 Bacteria 4942
92 Ga0157371_10021054 3300013102 Bacteria 4794
93 Ga0157369_10128272 3300013105 Bacteria 2688
94 Ga0157374_10000003 3300013296 Bacteria 854471
95 Ga0157374_10011286 3300013296 Bacteria 7728
96 Ga0157374_10021376 3300013296 Bacteria 5757
97 Ga0157378_10014972 3300013297 Bacteria 6791
98 Ga0157378_10023636 3300013297 Bacteria 5406
99 Ga0163162_10002156 3300013306 Bacteria 18459
100 Ga0163162_10003277 3300013306 Bacteria 15501
101 Ga0163162_10027119 3300013306 Bacteria 5665
102 Ga0163162_10037284 3300013306 Bacteria 4851
103 Ga0163162_10053346 3300013306 Bacteria 4063
104 Ga0157372_10019498 3300013307 Bacteria 7313
105 Ga0157372_10068330 3300013307 Bacteria 3994
106 Ga0157372_10121921 3300013307 Bacteria 2995
107 Ga0157375_10057953 3300013308 Bacteria 3830
108 Ga0157375_10067569 3300013308 Bacteria 3572
109 Ga0157375_10176035 3300013308 Bacteria 2289
110 Ga0163163_10000324 3300014325 Bacteria 46281
111 Ga0163163_10006055 3300014325 Bacteria 10520
112 Ga0163163_10008714 3300014325 Bacteria 9022
113 Ga0157377_10018789 3300014745 Bacteria 3599
114 Ga0157379_10013806 3300014968 Bacteria 7078
115 Ga0157379_10034112 3300014968 Bacteria 4535
116 Ga0157379_10038427 3300014968 Bacteria 4270
117 Ga0182005_1000347 3300015265 Bacteria 26332
118 Ga0209436_100381 3300025208 Bacteria 20022
119 Ga0209436_101912 3300025208 Bacteria 6710
120 Ga0209258_100116 3300025242 Bacteria 190317
121 Ga0209646_1000003 3300025246 Bacteria 1160860
122 Ga0209026_1000210 3300025250 Bacteria 81101
123 Ga0209148_1000175 3300025254 Bacteria 129536
124 Ga0209673_1000014 3300025273 Bacteria 537082
125 Ga0209673_1000018 3300025273 Bacteria 458281
126 Ga0209130_1002164 3300025284 Bacteria 10356
127 Ga0209564_1003694 3300025295 Bacteria 10080
128 Ga0209564_1012351 3300025295 Bacteria 3731
129 Ga0209758_1003228 3300025297 Bacteria 15163
130 Ga0209050_1000693 3300025298 Bacteria 50067
131 Ga0207426_1000024 3300025302 Bacteria 534075
132 Ga0207426_1000032 3300025302 Bacteria 457997
133 Ga0207426_1000431 3300025302 Bacteria 68516
134 Ga0207426_1001891 3300025302 Bacteria 15243
135 Ga0209257_1000004 3300025304 Bacteria 1678347
136 Ga0209257_1002351 3300025304 Bacteria 19024
137 Ga0207656_10000436 3300025321 Bacteria 13987
138 Ga0207710_10006316 3300025900 Bacteria 5067
139 Ga0207645_10000564 3300025907 Bacteria 30643
140 Ga0207645_10041585 3300025907 Bacteria 2941
141 Ga0207695_10000412 3300025913 Bacteria 95172
142 Ga0207695_10001215 3300025913 Bacteria 44130
143 Ga0207695_10012621 3300025913 Bacteria 10124
144 Ga0207671_10000957 3300025914 Bacteria 35834
145 Ga0207671_10013995 3300025914 Bacteria 6364
146 Ga0207671_10015694 3300025914 Bacteria 5921
147 Ga0207671_10032437 3300025914 Bacteria 3888
148 Ga0207649_10015090 3300025920 Bacteria 4338
149 Ga0207694_10008342 3300025924 Bacteria 7833
150 Ga0207694_10032985 3300025924 Bacteria 3966
151 Ga0207650_10019969 3300025925 Bacteria 4717
152 Ga0207686_10046541 3300025934 Bacteria 2676
153 Ga0207669_10034054 3300025937 Bacteria 2882
154 Ga0207691_10046284 3300025940 Bacteria 3998
155 Ga0207691_10050075 3300025940 Bacteria 3825
156 Ga0207689_10001048 3300025942 Bacteria 26551
157 Ga0207689_10003017 3300025942 Bacteria 15523
158 Ga0207689_10013738 3300025942 Bacteria 6900
159 Ga0207689_10066251 3300025942 Bacteria 2970
160 Ga0207679_10085312 3300025945 Bacteria 2425
161 Ga0207667_10003280 3300025949 Bacteria 19978
162 Ga0207667_10004880 3300025949 Bacteria 16372
163 Ga0207667_10099200 3300025949 Bacteria 3005
164 Ga0207712_10007017 3300025961 Bacteria 7104
165 Ga0207677_10064183 3300026023 Bacteria 2556
166 Ga0207703_10006034 3300026035 Bacteria 9693
167 Ga0207639_10003269 3300026041 Bacteria 10917
168 Ga0207639_10016837 3300026041 Bacteria 5178
169 Ga0207702_10018536 3300026078 Bacteria 5759
170 Ga0207641_10000038 3300026088 Bacteria 205418
171 Ga0207641_10005678 3300026088 Bacteria 10620
172 Ga0207648_10023744 3300026089 Bacteria 5486
173 Ga0207648_10026296 3300026089 Bacteria 5173
174 Ga0207648_10066250 3300026089 Bacteria 3149
175 Ga0207676_10024286 3300026095 Bacteria 4483
176 Ga0207676_10083070 3300026095 Bacteria 2607
177 Ga0207674_10004958 3300026116 Bacteria 15904
178 Ga0207674_10014563 3300026116 Bacteria 8679
179 Ga0207683_10085206 3300026121 Bacteria 2809
180 Ga0268266_10000016 3300028379 Bacteria 629101
181 Ga0268265_10029850 3300028380 Bacteria 3921
182 Ga0268264_10000080 3300028381 Bacteria 249126
183 Ga0268264_10001099 3300028381 Bacteria 26706
184 Ga0307517_10002012 3300028786 Bacteria 33092
185 Ga0307515_10000001 3300028794 Bacteria 4259510
186 Ga0265324_10014503 3300029957 Bacteria 2914
187 Ga0265331_10007044 3300031250 Bacteria 6556
188 Ga0265327_10000026 3300031251 Bacteria 379288
189 Ga0265327_10000093 3300031251 Bacteria 195220
190 Ga0265327_10000544 3300031251 Bacteria 64453
191 Ga0307509_10055682 3300031507 Bacteria 4201
192 Ga0307508_10007765 3300031616 Bacteria 9966
193 Ga0265314_10007134 3300031711 Bacteria 9739
194 Ga0316576_10038880 3300031727 Bacteria 3414
195 Ga0316578_10010958 3300031728 Bacteria 4724
196 Ga0307516_10002288 3300031730 Bacteria 25839
197 Ga0316585_10011800 3300032137 Bacteria 2580
198 Ga0316584_0016403 3300036712 Bacteria 5310
199 Ga0395900_0048222 3300037418 Bacteria 4388
200 Ga0395898_0030558 3300037466 Bacteria 5390
201 Ga0400490_46667 3300038726 Bacteria 27492
202 Ga0400491_12155 3300038727 Bacteria 3702
203 Ga0439457_009867 3300042014 Bacteria 2210
204 Ga0451577_0000231 3300042876 Bacteria 112899
205 Ga0451577_0008869 3300042876 Bacteria 9734
206 Ga0451577_0105146 3300042876 Bacteria 2523
207 Ga0451577_0108685 3300042876 Bacteria 2479
208 Ga0453684_0000004 3300044712 Bacteria 1469893
209 Ga0453684_0004472 3300044712 Bacteria 29443
210 Ga0453684_0008764 3300044712 Bacteria 17960
211 Ga0453684_0020598 3300044712 Bacteria 9930
212 Ga0453684_0050090 3300044712 Bacteria 5498
213 Ga0466968_0022747 3300044735 Bacteria 2550
214 Ga0466957_0000383 3300044842 Bacteria 21620
215 Ga0466957_0005438 3300044842 Bacteria 7153
216 Ga0451576_0085464 3300045051 Bacteria 3282
217 Ga0495668_0000082 3300046616 Bacteria 154982
218 Ga0495636_0000020 3300047318 Bacteria 75085
219 Ga0495687_000004 3300047443 Bacteria 779298
220 Ga0495686_0000034 3300047472 Bacteria 325038
221 Ga0496114_0000268 3300048917 Bacteria 37948
222 Ga0496115_0029743 3300048918 Bacteria 4293
223 Ga0496121_0000081 3300048924 Bacteria 229506
224 Ga0501032_0010410 3300049569 Bacteria 6706
225 Ga0501033_0066068 3300049570 Bacteria 2660
226 Ga0501034_0000152 3300049571 Bacteria 130576
227 Ga0501034_0005900 3300049571 Bacteria 13300
228 Ga0501034_0006028 3300049571 Bacteria 13102
229 Ga0501034_0059745 3300049571 Bacteria 3829
230 Ga0501036_0013968 3300049572 Bacteria 6677
231 Ga0501038_0059365 3300049574 Bacteria 3276
232 Ga0501039_0002968 3300049575 Bacteria 12695
233 Ga0501043_0030560 3300049579 Bacteria 4233
234 Ga0501043_0073073 3300049579 Bacteria 2694
235 Ga0501047_0021236 3300049581 Bacteria 6233
236 Ga0501048_0021971 3300049582 Bacteria 4670
237 Ga0501068_0025612 3300049584 Bacteria 3470
238 Ga0501070_0004266 3300049586 Bacteria 12293
239 Ga0501217_000847 3300049661 Bacteria 5395
240 Ga0501223_001532 3300049663 Bacteria 5330
241 Ga0501219_000694 3300049703 Bacteria 4665
242 Ga0501080_0041159 3300049742 Bacteria 4306
243 Ga0501083_0007147 3300049744 Bacteria 7927
244 Ga0501241_000273 3300049758 Bacteria 11408
245 Ga0501035_0003970 3300049822 Bacteria 14097
246 Ga0501044_0064399 3300049823 Bacteria 3743
247 Ga0501284_00010 3300050005 Bacteria 136120
248 nmdc:mga05p37_914_c1 3300050507 Bacteria 33336
249 Ga0500578_0000892 3300053086 Bacteria 33791
250 Ga0500578_0011702 3300053086 Bacteria 5665
251 Ga0500644_0000967 3300053088 Bacteria 8993
252 Ga0500646_0006194 3300053090 Bacteria 3040
253 Ga0500583_0000037 3300053092 Bacteria 92466
254 Ga0500583_0008492 3300053092 Bacteria 3689
255 Ga0500569_000126 3300053109 Bacteria 11996
256 Ga0500658_0000612 3300053134 Bacteria 14816
257 Ga0500577_0002174 3300053142 Bacteria 5004
258 Ga0500622_0002606 3300053156 Bacteria 12849
259 Ga0500622_0005268 3300053156 Bacteria 7802
260 Ga0500622_0008330 3300053156 Bacteria 5807
261 Ga0500636_0016804 3300053177 Bacteria 4314

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005335 Ga0070666_10066696 Ga0070666_100666961 612
2 3300009176 Ga0105242_10080210 Ga0105242_100802103 613
3 3300045051 Ga0451576_0085464 Ga0451576_0085464_1378_3255 613
4 3300013105 Ga0157369_10128272 Ga0157369_101282723 618
5 3300003323 rootH1_10123356 rootH1_101233562 627
6 3300005563 Ga0068855_100010734 Ga0068855_1000107347 672
7 3300009545 Ga0105237_10002099 Ga0105237_1000209923 673
8 3300031251 Ga0265327_10000026 Ga0265327_100000267 673
9 3300025949 Ga0207667_10004880 Ga0207667_100048808 675
10 3300005539 Ga0068853_100017360 Ga0068853_1000173604 676
11 3300009551 Ga0105238_10029648 Ga0105238_100296483 676
12 3300025924 Ga0207694_10032985 Ga0207694_100329852 676
13 3300025295 Ga0209564_1003694 Ga0209564_100369410 686
14 3300025297 Ga0209758_1003228 Ga0209758_10032286 686
15 3300002738 JGI25154J39366_1000016 JGI25154J39366_1000016122 687
16 3300003323 rootH1_10072787 rootH1_100727874 687
17 3300003354 JGI25160J50197_1003375 JGI25160J50197_10033754 687
18 3300003790 Ga0055528_1000227 Ga0055528_100022714 687
19 3300005262 Ga0065165_1000514 Ga0065165_100051441 687
20 3300025246 Ga0209646_1000003 Ga0209646_1000003123 687
21 3300025250 Ga0209026_1000210 Ga0209026_100021040 687
22 3300025273 Ga0209673_1000014 Ga0209673_1000014362 687
23 3300025273 Ga0209673_1000018 Ga0209673_1000018310 687
24 3300025295 Ga0209564_1012351 Ga0209564_10123511 687
25 3300025298 Ga0209050_1000693 Ga0209050_100069341 687
26 3300025302 Ga0207426_1000431 Ga0207426_100043140 687
27 3300025302 Ga0207426_1001891 Ga0207426_10018918 687
28 3300025304 Ga0209257_1002351 Ga0209257_100235117 687
29 3300049823 Ga0501044_0064399 Ga0501044_0064399_526_2715 687
30 3300005353 Ga0070669_100011093 Ga0070669_1000110935 689
31 3300005617 Ga0068859_100020768 Ga0068859_1000207685 689
32 3300005618 Ga0068864_100027178 Ga0068864_1000271783 689
33 3300006931 Ga0097620_100020768 Ga0097620_1000207685 689
34 3300009101 Ga0105247_10004301 Ga0105247_100043016 689
35 3300009553 Ga0105249_10000379 Ga0105249_1000037922 689
36 3300025900 Ga0207710_10006316 Ga0207710_100063163 689
37 3300025961 Ga0207712_10007017 Ga0207712_100070173 689
38 3300026095 Ga0207676_10083070 Ga0207676_100830702 689
39 3300044712 Ga0453684_0008764 Ga0453684_0008764_14966_17113 689
40 3300031250 Ga0265331_10007044 Ga0265331_100070444 691
41 3300031711 Ga0265314_10007134 Ga0265314_100071343 691
42 3300031616 Ga0307508_10007765 Ga0307508_100077657 692
43 3300031727 Ga0316576_10038880 Ga0316576_100388803 692
44 3300031728 Ga0316578_10010958 Ga0316578_100109583 692
45 3300032137 Ga0316585_10011800 Ga0316585_100118003 692
46 3300036712 Ga0316584_0016403 Ga0316584_0016403_2284_4443 692
47 3300003354 JGI25160J50197_1004748 JGI25160J50197_10047483 694
48 3300025302 Ga0207426_1000032 Ga0207426_1000032304 694
49 3300047318 Ga0495636_0000020 Ga0495636_0000020_68328_70535 694
50 3300049570 Ga0501033_0066068 Ga0501033_0066068_472_2598 694
51 3300049571 Ga0501034_0005900 Ga0501034_0005900_4800_6926 694
52 3300049571 Ga0501034_0006028 Ga0501034_0006028_2320_4446 694
53 3300049663 Ga0501223_001532 Ga0501223_001532_2075_4243 694
54 3300003323 rootH1_10116674 rootH1_101166742 695
55 3300048918 Ga0496115_0029743 Ga0496115_0029743_1733_3859 695
56 3300005289 Ga0065704_10073714 Ga0065704_100737143 696
57 3300013307 Ga0157372_10019498 Ga0157372_100194984 696
58 3300009545 Ga0105237_10013680 Ga0105237_100136807 697
59 3300010375 Ga0105239_10024096 Ga0105239_100240962 697
60 3300025914 Ga0207671_10015694 Ga0207671_100156944 697
61 3300009147 Ga0114129_10000608 Ga0114129_100006086 698
62 3300042014 Ga0439457_009867 Ga0439457_009867_35_2149 698
63 3300050507 nmdc:mga05p37_914_c1 nmdc:mga05p37_914_c1_1959_4085 698
64 3300053090 Ga0500646_0006194 Ga0500646_0006194_23_2137 698
65 3300053092 Ga0500583_0000037 Ga0500583_0000037_17074_19188 698
66 iso_pu_bacteria 2818991442 2819575012 698
67 iso_pu_bacteria 2821136567 2821141108 698
68 iso_pu_bacteria 2904467357 2904471609 698
69 3300005329 Ga0070683_100011349 Ga0070683_1000113493 699
70 3300005331 Ga0070670_100042943 Ga0070670_1000429433 699
71 3300005340 Ga0070689_100056691 Ga0070689_1000566912 699
72 3300005353 Ga0070669_100038835 Ga0070669_1000388352 699
73 3300005354 Ga0070675_100067728 Ga0070675_1000677283 699
74 3300005356 Ga0070674_100049869 Ga0070674_1000498693 699
75 3300005365 Ga0070688_100008396 Ga0070688_1000083966 699
76 3300005535 Ga0070684_100013556 Ga0070684_1000135564 699
77 3300005535 Ga0070684_100057105 Ga0070684_1000571053 699
78 3300005548 Ga0070665_100018850 Ga0070665_1000188504 699
79 3300005564 Ga0070664_100055605 Ga0070664_1000556053 699
80 3300005577 Ga0068857_100001350 Ga0068857_10000135024 699
81 3300005617 Ga0068859_100015430 Ga0068859_1000154305 699
82 3300005618 Ga0068864_100018279 Ga0068864_1000182795 699
83 3300006237 Ga0097621_100025540 Ga0097621_1000255403 699
84 3300006881 Ga0068865_100005768 Ga0068865_1000057684 699
85 3300006931 Ga0097620_100015430 Ga0097620_1000154305 699
86 3300009174 Ga0105241_10025312 Ga0105241_100253124 699
87 3300009176 Ga0105242_10025921 Ga0105242_100259213 699
88 3300013296 Ga0157374_10011286 Ga0157374_100112868 699
89 3300013296 Ga0157374_10021376 Ga0157374_100213764 699
90 3300013306 Ga0163162_10037284 Ga0163162_100372841 699
91 3300013308 Ga0157375_10057953 Ga0157375_100579532 699
92 3300013308 Ga0157375_10176035 Ga0157375_101760351 699
93 3300014325 Ga0163163_10008714 Ga0163163_100087144 699
94 3300014745 Ga0157377_10018789 Ga0157377_100187892 699
95 3300025907 Ga0207645_10000564 Ga0207645_100005647 699
96 3300025907 Ga0207645_10041585 Ga0207645_100415853 699
97 3300025920 Ga0207649_10015090 Ga0207649_100150903 699
98 3300025934 Ga0207686_10046541 Ga0207686_100465411 699
99 3300025937 Ga0207669_10034054 Ga0207669_100340543 699
100 3300025940 Ga0207691_10050075 Ga0207691_100500753 699
101 3300025942 Ga0207689_10003017 Ga0207689_1000301714 699
102 3300025942 Ga0207689_10013738 Ga0207689_100137382 699
103 3300025945 Ga0207679_10085312 Ga0207679_100853122 699
104 3300026089 Ga0207648_10023744 Ga0207648_100237443 699
105 3300026089 Ga0207648_10026296 Ga0207648_100262962 699
106 3300026095 Ga0207676_10024286 Ga0207676_100242864 699
107 3300026116 Ga0207674_10004958 Ga0207674_1000495814 699
108 3300031507 Ga0307509_10055682 Ga0307509_100556823 699
109 3300042876 Ga0451577_0008869 Ga0451577_0008869_6751_8877 699
110 3300044712 Ga0453684_0020598 Ga0453684_0020598_5940_8066 699
111 3300044842 Ga0466957_0000383 Ga0466957_0000383_17708_19831 699
112 3300046616 Ga0495668_0000082 Ga0495668_0000082_57230_59350 699
113 3300049703 Ga0501219_000694 Ga0501219_000694_853_2970 699
114 3300050005 Ga0501284_00010 Ga0501284_00010_75253_77370 699
115 3300053156 Ga0500622_0002606 Ga0500622_0002606_993_3137 699
116 iso_pu_bacteria 2890804823 2890807568 699
117 iso_pu_bacteria 2929239360 2929240038 699
118 3300005459 Ga0068867_100037911 Ga0068867_1000379112 700
119 3300005563 Ga0068855_100011279 Ga0068855_1000112793 700
120 3300005616 Ga0068852_100071046 Ga0068852_1000710463 700
121 3300009545 Ga0105237_10037699 Ga0105237_100376992 700
122 3300013306 Ga0163162_10053346 Ga0163162_100533462 700
123 3300025914 Ga0207671_10032437 Ga0207671_100324373 700
124 3300044842 Ga0466957_0005438 Ga0466957_0005438_1974_4103 700
125 iso_pu_bacteria 2738541278 2738726060 700
126 3300003322 rootL2_10087812 rootL2_100878123 701
127 3300005327 Ga0070658_10007334 Ga0070658_100073344 701
128 3300005331 Ga0070670_100078099 Ga0070670_1000780993 701
129 3300009545 Ga0105237_10000263 Ga0105237_1000026331 701
130 3300010375 Ga0105239_10004423 Ga0105239_100044234 701
131 3300013100 Ga0157373_10047262 Ga0157373_100472622 701
132 3300013297 Ga0157378_10014972 Ga0157378_100149723 701
133 3300013307 Ga0157372_10121921 Ga0157372_101219213 701
134 3300014325 Ga0163163_10000324 Ga0163163_100003247 701
135 3300014968 Ga0157379_10013806 Ga0157379_100138065 701
136 3300025914 Ga0207671_10000957 Ga0207671_100009573 701
137 3300026023 Ga0207677_10064183 Ga0207677_100641831 701
138 3300026088 Ga0207641_10005678 Ga0207641_1000567810 701
139 3300044735 Ga0466968_0022747 Ga0466968_0022747_348_2477 701
140 3300047472 Ga0495686_0000034 Ga0495686_0000034_298354_300510 701
141 3300053086 Ga0500578_0000892 Ga0500578_0000892_4934_7063 701
142 3300005539 Ga0068853_100003302 Ga0068853_10000330211 702
143 3300005539 Ga0068853_100084756 Ga0068853_1000847562 702
144 3300005548 Ga0070665_100000008 Ga0070665_100000008110 702
145 3300005563 Ga0068855_100070824 Ga0068855_1000708243 702
146 3300005614 Ga0068856_100018123 Ga0068856_1000181234 702
147 3300005617 Ga0068859_100025748 Ga0068859_1000257481 702
148 3300005843 Ga0068860_100000039 Ga0068860_10000003936 702
149 3300006931 Ga0097620_100025748 Ga0097620_1000257481 702
150 3300009093 Ga0105240_10000304 Ga0105240_1000030435 702
151 3300009093 Ga0105240_10002010 Ga0105240_100020105 702
152 3300009093 Ga0105240_10101011 Ga0105240_101010112 702
153 3300009545 Ga0105237_10000277 Ga0105237_1000027753 702
154 3300009551 Ga0105238_10013108 Ga0105238_100131083 702
155 3300013297 Ga0157378_10023636 Ga0157378_100236364 702
156 3300013306 Ga0163162_10003277 Ga0163162_100032779 702
157 3300015265 Ga0182005_1000347 Ga0182005_100034721 702
158 3300025208 Ga0209436_101912 Ga0209436_1019127 702
159 3300025913 Ga0207695_10000412 Ga0207695_1000041252 702
160 3300025913 Ga0207695_10001215 Ga0207695_1000121519 702
161 3300025913 Ga0207695_10012621 Ga0207695_100126216 702
162 3300025924 Ga0207694_10008342 Ga0207694_100083426 702
163 3300025949 Ga0207667_10003280 Ga0207667_1000328017 702
164 3300025949 Ga0207667_10099200 Ga0207667_100992003 702
165 3300026041 Ga0207639_10003269 Ga0207639_1000326911 702
166 3300026078 Ga0207702_10018536 Ga0207702_100185362 702
167 3300028379 Ga0268266_10000016 Ga0268266_10000016109 702
168 3300028381 Ga0268264_10000080 Ga0268264_10000080173 702
169 3300028786 Ga0307517_10002012 Ga0307517_1000201227 702
170 3300031251 Ga0265327_10000093 Ga0265327_10000093119 702
171 3300031730 Ga0307516_10002288 Ga0307516_100022887 702
172 3300042876 Ga0451577_0000231 Ga0451577_0000231_14553_16667 702
173 3300044712 Ga0453684_0000004 Ga0453684_0000004_900211_902325 702
174 3300047443 Ga0495687_000004 Ga0495687_000004_161272_163437 702
175 3300048924 Ga0496121_0000081 Ga0496121_0000081_171069_173177 702
176 3300049579 Ga0501043_0073073 Ga0501043_0073073_55_2247 702
177 3300053086 Ga0500578_0011702 Ga0500578_0011702_3080_5212 702
178 3300053156 Ga0500622_0005268 Ga0500622_0005268_4171_6306 702
179 iso_pu_bacteria 2840677318 2840677718 702
180 iso_pu_bacteria 2883068021 2883071113 702
181 iso_pu_bacteria 2896085136 2896085536 702
182 3300003762 Ga0055542_1004422 Ga0055542_10044223 703
183 3300005337 Ga0070682_100000018 Ga0070682_100000018156 703
184 3300005344 Ga0070661_100065592 Ga0070661_1000655922 703
185 3300005466 Ga0070685_10012952 Ga0070685_100129522 703
186 3300005844 Ga0068862_100031557 Ga0068862_1000315573 703
187 3300006358 Ga0068871_100014990 Ga0068871_1000149904 703
188 3300013296 Ga0157374_10000003 Ga0157374_10000003157 703
189 3300013306 Ga0163162_10027119 Ga0163162_100271193 703
190 3300014968 Ga0157379_10038427 Ga0157379_100384273 703
191 3300025242 Ga0209258_100116 Ga0209258_10011683 703
192 3300025254 Ga0209148_1000175 Ga0209148_100017514 703
193 3300025942 Ga0207689_10066251 Ga0207689_100662512 703
194 3300026116 Ga0207674_10014563 Ga0207674_100145639 703
195 3300026121 Ga0207683_10085206 Ga0207683_100852062 703
196 3300028380 Ga0268265_10029850 Ga0268265_100298501 703
197 3300028794 Ga0307515_10000001 Ga0307515_100000011250 703
198 3300029957 Ga0265324_10014503 Ga0265324_100145033 703
199 3300031251 Ga0265327_10000544 Ga0265327_1000054450 703
200 3300044712 Ga0453684_0050090 Ga0453684_0050090_2434_4626 703
201 3300049571 Ga0501034_0059745 Ga0501034_0059745_641_2773 703
202 3300049581 Ga0501047_0021236 Ga0501047_0021236_2214_4346 703
203 3300053088 Ga0500644_0000967 Ga0500644_0000967_1995_4106 703
204 3300053092 Ga0500583_0008492 Ga0500583_0008492_921_3032 703
205 3300053109 Ga0500569_000126 Ga0500569_000126_8313_10424 703
206 3300053134 Ga0500658_0000612 Ga0500658_0000612_6247_8358 703
207 3300053142 Ga0500577_0002174 Ga0500577_0002174_1528_3639 703
208 3300053177 Ga0500636_0016804 Ga0500636_0016804_85_2196 703
209 3300005539 Ga0068853_100006876 Ga0068853_1000068763 704
210 3300025321 Ga0207656_10000436 Ga0207656_100004366 704
211 3300026041 Ga0207639_10016837 Ga0207639_100168374 704
212 3300049569 Ga0501032_0010410 Ga0501032_0010410_435_2579 704
213 3300049572 Ga0501036_0013968 Ga0501036_0013968_3712_5856 704
214 3300049574 Ga0501038_0059365 Ga0501038_0059365_393_2537 704
215 3300049575 Ga0501039_0002968 Ga0501039_0002968_109_2253 704
216 3300049579 Ga0501043_0030560 Ga0501043_0030560_1954_4098 704
217 3300049582 Ga0501048_0021971 Ga0501048_0021971_778_2922 704
218 3300049584 Ga0501068_0025612 Ga0501068_0025612_86_2230 704
219 3300049586 Ga0501070_0004266 Ga0501070_0004266_6567_8711 704
220 3300049742 Ga0501080_0041159 Ga0501080_0041159_944_3088 704
221 3300049744 Ga0501083_0007147 Ga0501083_0007147_2712_4856 704
222 3300049822 Ga0501035_0003970 Ga0501035_0003970_10066_12210 704
223 3300005614 Ga0068856_100007044 Ga0068856_1000070443 705
224 3300013100 Ga0157373_10006994 Ga0157373_100069944 705
225 3300013102 Ga0157371_10019925 Ga0157371_100199253 705
226 3300013102 Ga0157371_10021054 Ga0157371_100210543 705
227 3300013307 Ga0157372_10068330 Ga0157372_100683303 705
228 3300037418 Ga0395900_0048222 Ga0395900_0048222_314_2518 705
229 3300037466 Ga0395898_0030558 Ga0395898_0030558_1512_3716 705
230 iso_pu_bacteria 8003151029 8003156612 705
231 3300042876 Ga0451577_0108685 Ga0451577_0108685_149_2302 706
232 iso_pu_bacteria 2818991444 2819586259 706
233 iso_pu_bacteria 2818991460 2819676972 706
234 iso_pu_bacteria 2884791551 2884796810 706
235 iso_pu_bacteria 2929154850 2929158829 706
236 iso_pu_bacteria 2945977869 2945980021 706
237 iso_pu_bacteria 2946013367 2946014118 706
238 3300038726 Ga0400490_46667 Ga0400490_46667_11302_13521 707
239 3300038727 Ga0400491_12155 Ga0400491_12155_673_2892 707
240 3300003320 rootH2_10004072 rootH2_1000407211 708
241 3300003322 rootL2_10007636 rootL2_100076363 708
242 3300003322 rootL2_10007637 rootL2_100076375 708
243 3300003322 rootL2_10033209 rootL2_100332093 708
244 3300003794 Ga0055531_10000080 Ga0055531_1000008069 708
245 3300025304 Ga0209257_1000004 Ga0209257_100000469 708
246 3300049758 Ga0501241_000273 Ga0501241_000273_4129_6255 708
247 3300053156 Ga0500622_0008330 Ga0500622_0008330_3050_5176 708
248 3300026089 Ga0207648_10066250 Ga0207648_100662503 709
249 3300049571 Ga0501034_0000152 Ga0501034_0000152_8681_10813 709
250 3300049661 Ga0501217_000847 Ga0501217_000847_856_2991 709
251 3300005329 Ga0070683_100014988 Ga0070683_1000149881 710
252 3300005331 Ga0070670_100028672 Ga0070670_1000286723 710
253 3300014325 Ga0163163_10006055 Ga0163163_100060555 710
254 3300025208 Ga0209436_100381 Ga0209436_10038117 710
255 3300025284 Ga0209130_1002164 Ga0209130_10021643 710
256 3300025302 Ga0207426_1000024 Ga0207426_1000024103 710
257 3300025925 Ga0207650_10019969 Ga0207650_100199692 710
258 3300005335 Ga0070666_10000026 Ga0070666_1000002674 712
259 3300005617 Ga0068859_100000047 Ga0068859_10000004734 712
260 3300005841 Ga0068863_100011739 Ga0068863_1000117397 712
261 3300005843 Ga0068860_100004547 Ga0068860_10000454712 712
262 3300006237 Ga0097621_100023112 Ga0097621_1000231122 712
263 3300006931 Ga0097620_100000047 Ga0097620_10000004734 712
264 3300013306 Ga0163162_10002156 Ga0163162_1000215613 712
265 3300013308 Ga0157375_10067569 Ga0157375_100675693 712
266 3300014968 Ga0157379_10034112 Ga0157379_100341124 712
267 3300025914 Ga0207671_10013995 Ga0207671_100139955 712
268 3300025940 Ga0207691_10046284 Ga0207691_100462842 712
269 3300025942 Ga0207689_10001048 Ga0207689_1000104816 712
270 3300026035 Ga0207703_10006034 Ga0207703_100060349 712
271 3300026088 Ga0207641_10000038 Ga0207641_1000003882 712
272 3300028381 Ga0268264_10001099 Ga0268264_1000109915 712
273 3300042876 Ga0451577_0105146 Ga0451577_0105146_80_2221 712
274 3300013102 Ga0157371_10000946 Ga0157371_1000094619 713
275 3300044712 Ga0453684_0004472 Ga0453684_0004472_19915_22137 713
276 3300048917 Ga0496114_0000268 Ga0496114_0000268_16480_18678 717
277 2162886007 SwRhRL2b_contig_577364 SwRhRL2b_0794.00001150 727

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02433

FixO

Cytochrome C oxidase, mono-heme subunit/FixO

508

722

0.98

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

41

463

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8snh-assembly1.cif.gz_E cytochrome bc1-cbb3 supercomplex from pseudomonas aeruginosa 0.9759 24 477
3mk7-assembly4.cif.gz_K the structure of cbb3 cytochrome oxidase 0.9757 23 477
6xkw-assembly1.cif.gz_n r. capsulatus ciii2civ bipartite super-complex (sc-2a) with ccoh/cy 0.9654 24 473
3mk7-assembly4.cif.gz_K the structure of cbb3 cytochrome oxidase 0.9531 23 477
8snh-assembly1.cif.gz_E cytochrome bc1-cbb3 supercomplex from pseudomonas aeruginosa 0.9452 24 477
ID Description Score Start End Superfamily
5djqA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9745 24 480 1.20.210.10
5djqA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.954 24 480 1.20.210.10
4xydA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8339 26 469 1.20.210.10
4xydA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8112 26 469 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8017 27 478 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A258R6M5-F1-model_v4 Cytochrome C oxidase Cbb3 0.9878 299 475 GO:0004129
GO:0005886
GO:0006119
GO:0015990
GO:0020037
GO:0022904
AF-A0A259K6V1-F1-model_v4 deleted 0.9873 324 475
AF-A0A3D2FEP3-F1-model_v4 Cytochrome oxidase 0.9869 322 475 GO:0004129
GO:0005886
GO:0006119
GO:0015990
GO:0020037
GO:0022904
AF-W1I8C5-F1-model_v4 Cbb3-type cytochrome c oxidase subunit I CooN 0.9864 324 474 GO:0004129
GO:0005886
GO:0006119
GO:0015990
GO:0020037
GO:0022904
AF-H5VBJ3-F1-model_v4 deleted 0.9853 362 474

Feature Viewer

pLDDT pTM Quality
82.54 0.86 High
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Predicted Structure (AlphaFold2)

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