F381457

General Info

Members Datasets Scaffolds Average Seq Length
276 223 174 295

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2508501039|2508676588
Length 333
Sequence ASSSSAAPSSGALSSAEAPAIAPPAAAAPSSTRVGWIGAGVMGAAMAGHLLRAGYPLTVTTRTRDRAKALLDEGASWADTPAGVAAASDVVFSMVGFPEDVREVLLGPDGALSGARPGAVLVDMTTSEPALAIEVAEAAAARGVHALDAPVSGGDVGARNATLSIMIGGPAEVVDAVRPCLDAMGKSIIRQGGPGAGQHTKMVNQILIASTMVGVTEALLYAYRSGLDVERVLESVSGGAAGSWSLSNLAPRIVAGNFAPGFFVDHFVKDLGIALAEARRARLALPGLALANQLYVALQGQGRGRDGTQSLVHALAAMSGQSFPPSAAPGPAS

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
3 2517572101 Frankia sp. DC12 Isolate Nodule
4 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
5 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
6 2554235283 Bacillus safensis VK Isolate Rhizosphere
7 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
8 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
9 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
10 2643221731 Bacillus sp. Root147 Isolate Unclassified
11 2643221732 Bacillus sp. Root239 Isolate Unclassified
12 2643221735 Bacillus sp. Root920 Isolate Unclassified
13 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
14 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
15 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
16 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
17 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
18 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
19 2687453737 Frankia sp. BMG5.36 Isolate Nodule
20 2738541295 Bacillus sp. OK085 Isolate Unclassified
21 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
22 2738543010 Bacillus sp. YR335 Isolate Unclassified
23 2738543017 Bacillus sp. OV186 Isolate Unclassified
24 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
25 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
26 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
27 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
28 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
29 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
30 2811994870 Bacillus sp. JB4 Isolate Unclassified
31 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
32 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
33 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
34 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
35 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
36 2842682962 Bacillus sp. R-72492 Isolate Unclassified
37 2849139964 Bacillus sp. R-71875 Isolate Unclassified
38 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
39 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
40 2857472729 Cohnella sp. R-74144 Isolate Unclassified
41 2857581216 Bacillus sp. R-71922 Isolate Unclassified
42 2857586860 Bacillus sp. R-71935 Isolate Unclassified
43 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
44 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
45 2860837431 Bacillus sp. WR11 Isolate Unclassified
46 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
47 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
48 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
49 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
50 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
51 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
52 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
53 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
54 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
55 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
56 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
57 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
58 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
59 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
60 2919720352 Priestia megaterium 4340 Isolate Unclassified
61 2919726948 Bacillus pumilus 4489 Isolate Unclassified
62 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
63 2929004312 Priestia megaterium 1104 Isolate Unclassified
64 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
65 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
66 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
67 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
68 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
69 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
70 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
71 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
72 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
73 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
74 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
75 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
76 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
77 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
78 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
79 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
80 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
81 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
82 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
83 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
84 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
85 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
86 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
87 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
88 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
89 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
90 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
91 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
92 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
93 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
94 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
95 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
96 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
97 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
98 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
99 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
100 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
101 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
102 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
103 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
104 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
105 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
106 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
107 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
108 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
109 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
110 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
111 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
112 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
113 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
114 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
115 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
116 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
117 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
118 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
119 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
120 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
121 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
124 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
126 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
139 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
140 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
141 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
142 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
143 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
144 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
145 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
146 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
147 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
148 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
149 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
150 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
151 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
152 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
153 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
154 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
155 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
156 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
157 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
158 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
159 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
160 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
161 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
162 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
163 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
164 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
165 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
166 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
167 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
168 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
169 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
170 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
171 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
172 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
173 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
174 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
175 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
176 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
177 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
178 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
179 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
180 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
181 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
182 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
190 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300049548 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
195 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
204 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
205 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
206 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
207 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
209 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
210 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
211 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
212 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
213 8002775197 Frankia nepalensis CN7 Isolate Nodule
214 8002784119 Frankia sp. AgB1.9 Isolate Nodule
215 8022653035 Bacillus sp. Rc4 Isolate Unclassified
216 8022792930 Bacillus sp. Xin Isolate Rhizosphere
217 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
218 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
219 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
220 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
221 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
222 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
223 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.23
Metatranscriptomes 1.81
Isolates 36.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.78
Nodule 2.54
Rhizoplane 4.35
Rhizosphere 56.52
Stem 0
Stem Tuber 0
Unclassified 26.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1002655 3300002987 Bacteria 6662
2 JGI25151J46595_10002079 3300003187 Bacteria 12471
3 JGI25151J46595_10004212 3300003187 Bacteria 7654
4 JGI25151J46595_10004508 3300003187 Bacteria 7360
5 JGI25151J46595_10006825 3300003187 Bacteria 5680
6 JGI25151J46595_10007554 3300003187 Bacteria 5313
7 rootH1_10001066 3300003316 Bacteria 50561
8 rootL2_10007979 3300003322 Bacteria 48999
9 Ga0055538_1000379 3300003751 Bacteria 18310
10 Ga0055532_1000004 3300003758 Bacteria 471824
11 Ga0055532_1000518 3300003758 Bacteria 16851
12 Ga0070670_100115444 3300005331 Bacteria 2315
13 Ga0070714_100534540 3300005435 Bacteria 1121
14 Ga0070707_100275131 3300005468 Bacteria 1637
15 Ga0070698_100031051 3300005471 Bacteria 5539
16 Ga0070699_100447690 3300005518 Bacteria 1171
17 Ga0070679_100271959 3300005530 Bacteria 1648
18 Ga0070665_100740604 3300005548 Bacteria 996
19 Ga0068859_100000055 3300005617 Bacteria 119802
20 Ga0068859_100007639 3300005617 Bacteria 10988
21 Ga0068864_100094844 3300005618 Bacteria 2638
22 Ga0068863_100013567 3300005841 Bacteria 7860
23 Ga0068858_100000242 3300005842 Bacteria 59017
24 Ga0068862_100000039 3300005844 Bacteria 171385
25 Ga0068862_100663863 3300005844 Bacteria 1007
26 Ga0075364_10016092 3300006051 Bacteria 4648
27 Ga0070712_100077584 3300006175 Bacteria 2395
28 Ga0097620_100000055 3300006931 Bacteria 119802
29 Ga0097620_100007639 3300006931 Bacteria 10988
30 Ga0105251_10009246 3300009011 Bacteria 5841
31 Ga0105244_10013687 3300009036 Bacteria 4727
32 Ga0105244_10017729 3300009036 Bacteria 4016
33 Ga0105250_10001190 3300009092 Bacteria 14535
34 Ga0105250_10004506 3300009092 Bacteria 6398
35 Ga0111539_10237393 3300009094 Bacteria 2122
36 Ga0105247_10001385 3300009101 Bacteria 17592
37 Ga0105246_10029942 3300011119 Bacteria 3590
38 Ga0105246_10175131 3300011119 Bacteria 1647
39 Ga0157374_10173337 3300013296 Bacteria 2105
40 Ga0163163_10034214 3300014325 Bacteria 4919
41 Ga0163163_10440267 3300014325 Bacteria 1363
42 Ga0157380_10498942 3300014326 Unclassified 1182
43 Ga0157379_10000099 3300014968 Bacteria 59021
44 Ga0209784_100233 3300025224 Bacteria 36929
45 Ga0209147_100010 3300025229 Bacteria 741391
46 Ga0209147_100069 3300025229 Bacteria 224017
47 Ga0209147_102653 3300025229 Bacteria 4173
48 Ga0209130_1001414 3300025284 Bacteria 15986
49 Ga0209676_1000371 3300025292 Bacteria 83205
50 Ga0209025_1000001 3300025294 Bacteria 1888151
51 Ga0209025_1000218 3300025294 Bacteria 137784
52 Ga0209025_1000751 3300025294 Bacteria 54338
53 Ga0209025_1001192 3300025294 Bacteria 36737
54 Ga0209025_1002725 3300025294 Bacteria 17933
55 Ga0209025_1004279 3300025294 Bacteria 12539
56 Ga0209025_1007396 3300025294 Bacteria 8206
57 Ga0209025_1020314 3300025294 Bacteria 3640
58 Ga0209025_1026757 3300025294 Bacteria 2883
59 Ga0207696_1003120 3300025711 Bacteria 7726
60 Ga0207696_1003757 3300025711 Bacteria 6779
61 Ga0207696_1025605 3300025711 Bacteria 1837
62 Ga0207655_1039002 3300025728 Bacteria 2069
63 Ga0207713_1005673 3300025735 Bacteria 7759
64 Ga0207713_1011335 3300025735 Bacteria 4859
65 Ga0207710_10000191 3300025900 Bacteria 58181
66 Ga0207652_10234710 3300025921 Bacteria 1653
67 Ga0207646_10128235 3300025922 Bacteria 2282
68 Ga0207712_10007940 3300025961 Bacteria 6705
69 Ga0207703_10000262 3300026035 Bacteria 59030
70 Ga0207703_10047662 3300026035 Bacteria 3456
71 Ga0207641_10005623 3300026088 Bacteria 10679
72 Ga0207676_10143508 3300026095 Bacteria 2047
73 Ga0209371_1010120 3300027312 Bacteria 2933
74 Ga0268265_10000020 3300028380 Bacteria 275575
75 Ga0265319_1005101 3300028563 Bacteria 6367
76 Ga0265338_10029736 3300028800 Bacteria 5407
77 Ga0265338_10071730 3300028800 Bacteria 2961
78 Ga0268256_1010814 3300030500 Bacteria 2933
79 Ga0307408_100007540 3300031548 Bacteria 7193
80 Ga0307408_100024179 3300031548 Bacteria 4146
81 Ga0307408_100361397 3300031548 Unclassified 1235
82 Ga0265314_10053889 3300031711 Bacteria 2787
83 Ga0307405_10352440 3300031731 Bacteria 1136
84 Ga0307413_10071754 3300031824 Unclassified 2183
85 Ga0307409_100661910 3300031995 Unclassified 1039
86 Ga0307416_100257540 3300032002 Bacteria 1703
87 Ga0307411_10091664 3300032005 Unclassified 2123
88 Ga0373942_0039215 3300035207 Unclassified 1287
89 Ga0316574_0005815 3300035398 Bacteria 6616
90 Ga0373931_0064625 3300035691 Bacteria 1981
91 Ga0373927_0001782 3300035695 Bacteria 16060
92 Ga0373937_0368918 3300036401 Unclassified 1361
93 Ga0316582_0228608 3300036647 Bacteria 1273
94 Ga0316584_0359838 3300036712 Bacteria 1043
95 Ga0373925_0000119 3300037068 Bacteria 85035
96 Ga0436364_0422064 3300037853 Bacteria 15220
97 Ga0400483_042907 3300039062 Bacteria 17079
98 Ga0400483_170189 3300039062 Bacteria 23283
99 Ga0439460_0067019 3300042461 Bacteria 1105
100 Ga0451577_0036166 3300042876 Bacteria 4447
101 Ga0451577_0040051 3300042876 Bacteria 4208
102 Ga0453684_0001553 3300044712 Bacteria 64147
103 Ga0453684_0001589 3300044712 Bacteria 62571
104 Ga0453684_0027696 3300044712 Bacteria 8113
105 Ga0453684_0227570 3300044712 Bacteria 2155
106 Ga0466959_0369352 3300045049 Bacteria 977
107 Ga0451576_0085958 3300045051 Bacteria 3272
108 Ga0495603_0132087 3300046455 Bacteria 1453
109 Ga0495653_0056607 3300046463 Bacteria 2988
110 Ga0495661_0080419 3300046665 Bacteria 1881
111 Ga0495613_0113097 3300046689 Unclassified 1955
112 Ga0495670_0166183 3300046691 Bacteria 1161
113 Ga0495660_0077232 3300046810 Bacteria 1753
114 Ga0495604_0029492 3300047317 Bacteria 4365
115 Ga0495674_0019222 3300047319 Bacteria 6345
116 Ga0495676_0235170 3300047321 Bacteria 1257
117 Ga0495675_0051156 3300047444 Bacteria 2625
118 Ga0496102_0030676 3300048905 Bacteria 4813
119 Ga0496102_0266432 3300048905 Bacteria 1615
120 Ga0496103_0132536 3300048906 Bacteria 1592
121 Ga0496104_0223727 3300048907 Bacteria 1794
122 Ga0496105_0132986 3300048908 Bacteria 2050
123 Ga0496110_0037847 3300048913 Bacteria 4195
124 Ga0496111_0023660 3300048914 Bacteria 4315
125 Ga0496112_0132596 3300048915 Bacteria 2462
126 Ga0496113_0310111 3300048916 Bacteria 1264
127 Ga0496113_0321579 3300048916 Bacteria 1240
128 Ga0496113_0322026 3300048916 Bacteria 1239
129 Ga0496116_0000227 3300048919 Bacteria 104783
130 Ga0496116_0013529 3300048919 Bacteria 6569
131 Ga0496116_0026751 3300048919 Bacteria 4209
132 Ga0496116_0075682 3300048919 Bacteria 2111
133 Ga0496116_0145913 3300048919 Bacteria 1323
134 Ga0496117_0054668 3300048920 Bacteria 2795
135 Ga0496118_0002652 3300048921 Bacteria 23685
136 Ga0496119_0001766 3300048922 Bacteria 25173
137 Ga0496121_0011049 3300048924 Bacteria 10078
138 Ga0496121_0419053 3300048924 Bacteria 872
139 Ga0496122_0123961 3300048925 Bacteria 1659
140 Ga0496122_0144107 3300048925 Bacteria 1484
141 Ga0496122_0170466 3300048925 Bacteria 1313
142 Ga0496123_0119540 3300048926 Bacteria 1486
143 Ga0496123_0144417 3300048926 Bacteria 1295
144 Ga0496124_0000183 3300048927 Bacteria 124048
145 Ga0496124_0108002 3300048927 Bacteria 2244
146 Ga0496125_0003871 3300048928 Bacteria 17709
147 Ga0496125_0023537 3300048928 Bacteria 5684
148 Ga0496125_0056735 3300048928 Bacteria 3178
149 Ga0501343_000452 3300049132 Bacteria 2378
150 Ga0501315_012609 3300049531 Bacteria 1048
151 Ga0501316_015642 3300049532 Bacteria 915
152 Ga0501332_04084 3300049548 Bacteria 859
153 Ga0501335_001475 3300049551 Bacteria 1810
154 Ga0501032_0019636 3300049569 Bacteria 4724
155 Ga0501033_0003685 3300049570 Bacteria 12464
156 Ga0501034_0251501 3300049571 Bacteria 1712
157 Ga0501037_0006678 3300049573 Bacteria 8437
158 Ga0501042_0134475 3300049578 Bacteria 1783
159 Ga0501046_0001224 3300049580 Bacteria 24859
160 Ga0501047_0128199 3300049581 Bacteria 2417
161 Ga0501048_0070659 3300049582 Bacteria 2465
162 Ga0501070_0354031 3300049586 Bacteria 1191
163 Ga0501071_0136246 3300049587 Bacteria 1827
164 Ga0501245_019723 3300049708 Bacteria 1047
165 Ga0501080_0119398 3300049742 Bacteria 2444
166 Ga0501080_0142645 3300049742 Bacteria 2215
167 Ga0501080_0369500 3300049742 Bacteria 1293
168 Ga0501080_0539016 3300049742 Bacteria 1040
169 Ga0501035_0235500 3300049822 Bacteria 1559
170 Ga0501044_0122038 3300049823 Bacteria 2605
171 nmdc:mga00v17_16809_c1 3300050491 Bacteria 4129
172 nmdc:mga06z11_135215_c1 3300050494 Bacteria 1388
173 Ga0495601_0025018 3300053077 Bacteria 3679
174 Ga0530510_0033275 3300061734 Bacteria 3712

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006175 Ga0070712_100077584 Ga0070712_1000775842 259
2 3300049571 Ga0501034_0251501 Ga0501034_0251501_714_1547 268
3 3300026035 Ga0207703_10047662 Ga0207703_100476621 269
4 3300005617 Ga0068859_100007639 Ga0068859_1000076397 270
5 3300006931 Ga0097620_100007639 Ga0097620_1000076397 270
6 3300003316 rootH1_10001066 rootH1_1000106649 272
7 3300005841 Ga0068863_100013567 Ga0068863_10001356712 272
8 3300026088 Ga0207641_10005623 Ga0207641_100056235 272
9 iso_pu_bacteria 2687453737 2689957006 273
10 3300048922 Ga0496119_0001766 Ga0496119_0001766_1085_2065 275
11 3300049132 Ga0501343_000452 Ga0501343_000452_1513_2343 276
12 3300049548 Ga0501332_04084 Ga0501332_04084_11_841 276
13 3300050494 nmdc:mga06z11_135215_c1 nmdc:mga06z11_135215_c1_104_1045 276
14 3300005530 Ga0070679_100271959 Ga0070679_1002719593 277
15 3300025921 Ga0207652_10234710 Ga0207652_102347101 277
16 3300045049 Ga0466959_0369352 Ga0466959_0369352_50_934 277
17 3300048905 Ga0496102_0266432 Ga0496102_0266432_625_1605 277
18 3300048919 Ga0496116_0000227 Ga0496116_0000227_35603_36583 277
19 3300048920 Ga0496117_0054668 Ga0496117_0054668_832_1812 277
20 3300048921 Ga0496118_0002652 Ga0496118_0002652_11763_12743 277
21 3300048924 Ga0496121_0011049 Ga0496121_0011049_5663_6532 277
22 3300048924 Ga0496121_0419053 Ga0496121_0419053_28_861 277
23 3300050491 nmdc:mga00v17_16809_c1 nmdc:mga00v17_16809_c1_2868_3770 277
24 3300042461 Ga0439460_0067019 Ga0439460_0067019_38_946 280
25 iso_pu_bacteria 3006826541 3006829494 280
26 iso_pu_bacteria 2928510474 2928511519 283
27 iso_pu_bacteria 8054280661 8054284589 283
28 iso_pu_bacteria 2738543010 2739231514 284
29 iso_pu_bacteria 2808606399 2809054768 284
30 iso_pu_bacteria 2860837431 2860838951 284
31 iso_pu_bacteria 2962290636 2962292372 284
32 iso_pu_bacteria 2969136845 2969138345 284
33 iso_pu_bacteria 2969765954 2969767865 284
34 iso_pu_bacteria 2969770375 2969772140 284
35 iso_pu_bacteria 2980492589 2980494142 284
36 iso_pu_bacteria 3006879489 3006880590 284
37 iso_pu_bacteria 8022653035 8022653278 284
38 iso_pu_bacteria 8022948649 8022951672 284
39 iso_pu_bacteria 2684623153 2686996562 285
40 iso_pu_bacteria 2816332186 2816863784 285
41 iso_pu_bacteria 2849139964 2849140688 285
42 iso_pu_bacteria 2857609550 2857610388 285
43 iso_pu_bacteria 3001267043 3001267425 285
44 iso_pu_bacteria 3001272096 3001272893 285
45 iso_pu_bacteria 3006973921 3006974620 285
46 iso_pu_bacteria 3006988479 3006989815 285
47 iso_pu_bacteria 2540341094 2540606532 286
48 iso_pu_bacteria 2554235283 2555469750 286
49 iso_pu_bacteria 2643221731 2644720085 286
50 iso_pu_bacteria 2643221732 2644721453 286
51 iso_pu_bacteria 2643221735 2644739668 286
52 iso_pu_bacteria 2671180330 2672334910 286
53 iso_pu_bacteria 2687453109 2687497814 286
54 iso_pu_bacteria 2738541299 2738837455 286
55 iso_pu_bacteria 2791355222 2793185537 286
56 iso_pu_bacteria 2811994870 2812315695 286
57 iso_pu_bacteria 2818991465 2819708823 286
58 iso_pu_bacteria 2818991468 2819724459 286
59 iso_pu_bacteria 2823526263 2823527690 286
60 iso_pu_bacteria 2842682962 2842685327 286
61 iso_pu_bacteria 2908665501 2908666029 286
62 iso_pu_bacteria 2919093281 2919093778 286
63 iso_pu_bacteria 2919720352 2919723671 286
64 iso_pu_bacteria 2919726948 2919729319 286
65 iso_pu_bacteria 2929004312 2929005473 286
66 iso_pu_bacteria 2954773129 2954774815 286
67 iso_pu_bacteria 2960319331 2960321825 286
68 iso_pu_bacteria 2960375949 2960377084 286
69 iso_pu_bacteria 3006969106 3006970835 286
70 iso_pu_bacteria 8022893055 8022895257 286
71 iso_pu_bacteria 8022914991 8022916095 286
72 3300005435 Ga0070714_100534540 Ga0070714_1005345401 287
73 3300005518 Ga0070699_100447690 Ga0070699_1004476901 287
74 3300005844 Ga0068862_100663863 Ga0068862_1006638632 287
75 3300014325 Ga0163163_10440267 Ga0163163_104402672 287
76 3300025922 Ga0207646_10128235 Ga0207646_101282352 287
77 3300031731 Ga0307405_10352440 Ga0307405_103524401 287
78 iso_pu_bacteria 2857581216 2857584464 287
79 iso_pu_bacteria 8057632132 8057633993 287
80 3300009101 Ga0105247_10001385 Ga0105247_100013852 288
81 3300025900 Ga0207710_10000191 Ga0207710_1000019127 288
82 3300028563 Ga0265319_1005101 Ga0265319_10051014 288
83 3300036401 Ga0373937_0368918 Ga0373937_0368918_12_914 288
84 3300037853 Ga0436364_0422064 Ga0436364_0422064_11239_12120 288
85 3300044712 Ga0453684_0027696 Ga0453684_0027696_5753_6622 288
86 3300046463 Ga0495653_0056607 Ga0495653_0056607_1619_2518 288
87 3300046689 Ga0495613_0113097 Ga0495613_0113097_357_1256 288
88 3300047317 Ga0495604_0029492 Ga0495604_0029492_692_1591 288
89 3300047319 Ga0495674_0019222 Ga0495674_0019222_4626_5525 288
90 3300047444 Ga0495675_0051156 Ga0495675_0051156_1524_2423 288
91 3300049569 Ga0501032_0019636 Ga0501032_0019636_785_1651 288
92 3300049570 Ga0501033_0003685 Ga0501033_0003685_2973_3839 288
93 3300049573 Ga0501037_0006678 Ga0501037_0006678_1298_2164 288
94 3300049578 Ga0501042_0134475 Ga0501042_0134475_564_1430 288
95 3300049580 Ga0501046_0001224 Ga0501046_0001224_9668_10534 288
96 3300049581 Ga0501047_0128199 Ga0501047_0128199_158_1024 288
97 3300049582 Ga0501048_0070659 Ga0501048_0070659_518_1384 288
98 3300049586 Ga0501070_0354031 Ga0501070_0354031_23_889 288
99 3300049742 Ga0501080_0369500 Ga0501080_0369500_229_1095 288
100 3300049822 Ga0501035_0235500 Ga0501035_0235500_64_930 288
101 3300049823 Ga0501044_0122038 Ga0501044_0122038_1709_2575 288
102 3300053077 Ga0495601_0025018 Ga0495601_0025018_891_1793 288
103 iso_pu_bacteria 2738541295 2738812730 288
104 iso_pu_bacteria 2904524088 2904530087 288
105 iso_pu_bacteria 2919143609 2919149446 288
106 iso_pu_bacteria 2919414237 2919414767 288
107 iso_pu_bacteria 2919720352 2919725979 288
108 iso_pu_bacteria 2936361878 2936365086 288
109 iso_pu_bacteria 2990275345 2990279541 288
110 iso_pu_bacteria 3001892409 3001893680 288
111 iso_pu_bacteria 3006984091 3006985720 288
112 iso_pu_bacteria 8057582654 8057586482 288
113 3300025294 Ga0209025_1020314 Ga0209025_10203142 289
114 3300032002 Ga0307416_100257540 Ga0307416_1002575402 289
115 3300035398 Ga0316574_0005815 Ga0316574_0005815_2950_3828 289
116 3300036712 Ga0316584_0359838 Ga0316584_0359838_64_942 289
117 3300046665 Ga0495661_0080419 Ga0495661_0080419_495_1364 289
118 3300048919 Ga0496116_0026751 Ga0496116_0026751_2641_3510 289
119 iso_pu_bacteria 2585428059 2587738458 289
120 iso_pu_bacteria 2857465823 2857470643 289
121 iso_pu_bacteria 2857472729 2857477625 289
122 iso_pu_bacteria 2857591370 2857596743 289
123 iso_pu_bacteria 2919720352 2919726354 289
124 iso_pu_bacteria 8022792930 8022796294 289
125 3300003322 rootL2_10007979 rootL2_1000797912 290
126 3300005331 Ga0070670_100115444 Ga0070670_1001154441 290
127 3300025294 Ga0209025_1000001 Ga0209025_10000011552 290
128 3300031548 Ga0307408_100024179 Ga0307408_1000241795 290
129 3300031548 Ga0307408_100361397 Ga0307408_1003613971 290
130 3300031824 Ga0307413_10071754 Ga0307413_100717542 290
131 3300031995 Ga0307409_100661910 Ga0307409_1006619101 290
132 3300032005 Ga0307411_10091664 Ga0307411_100916641 290
133 3300048914 Ga0496111_0023660 Ga0496111_0023660_3282_4184 290
134 3300048916 Ga0496113_0310111 Ga0496113_0310111_161_1063 290
135 3300048919 Ga0496116_0075682 Ga0496116_0075682_473_1390 290
136 3300048927 Ga0496124_0000183 Ga0496124_0000183_89019_89936 290
137 3300048928 Ga0496125_0003871 Ga0496125_0003871_1858_2730 290
138 3300049587 Ga0501071_0136246 Ga0501071_0136246_837_1739 290
139 iso_pu_bacteria 2510917027 2511179250 290
140 iso_pu_bacteria 2524023129 2524189791 290
141 iso_pu_bacteria 2687453341 2688393447 290
142 iso_pu_bacteria 2857460504 2857461902 290
143 iso_pu_bacteria 2919425241 2919429693 290
144 iso_pu_bacteria 3006978542 3006979008 290
145 iso_pu_bacteria 8057473075 8057478109 290
146 3300005468 Ga0070707_100275131 Ga0070707_1002751312 291
147 3300005471 Ga0070698_100031051 Ga0070698_1000310514 291
148 3300005618 Ga0068864_100094844 Ga0068864_1000948443 291
149 3300009036 Ga0105244_10013687 Ga0105244_100136876 291
150 3300014326 Ga0157380_10498942 Ga0157380_104989421 291
151 3300026095 Ga0207676_10143508 Ga0207676_101435082 291
152 3300027312 Ga0209371_1010120 Ga0209371_10101202 291
153 3300030500 Ga0268256_1010814 Ga0268256_10108142 291
154 3300031548 Ga0307408_100007540 Ga0307408_1000075407 291
155 3300031711 Ga0265314_10053889 Ga0265314_100538892 291
156 3300035207 Ga0373942_0039215 Ga0373942_0039215_53_940 291
157 3300035691 Ga0373931_0064625 Ga0373931_0064625_648_1535 291
158 3300035695 Ga0373927_0001782 Ga0373927_0001782_13478_14365 291
159 3300037068 Ga0373925_0000119 Ga0373925_0000119_1926_2813 291
160 3300046691 Ga0495670_0166183 Ga0495670_0166183_207_1103 291
161 3300048916 Ga0496113_0321579 Ga0496113_0321579_346_1224 291
162 3300048919 Ga0496116_0145913 Ga0496116_0145913_262_1149 291
163 3300049531 Ga0501315_012609 Ga0501315_012609_13_891 291
164 3300049532 Ga0501316_015642 Ga0501316_015642_13_891 291
165 3300049551 Ga0501335_001475 Ga0501335_001475_759_1712 291
166 3300049708 Ga0501245_019723 Ga0501245_019723_70_948 291
167 iso_pu_bacteria 2593339131 2595088989 291
168 iso_pu_bacteria 2738543017 2739268769 291
169 iso_pu_bacteria 2757320391 2757564733 291
170 iso_pu_bacteria 2775507192 2777837158 291
171 iso_pu_bacteria 2857586860 2857587720 291
172 iso_pu_bacteria 2936340661 2936344074 291
173 iso_pu_bacteria 2977254563 2977258503 291
174 iso_pu_bacteria 8002784119 8002786841 291
175 3300002987 JGI25159J45721_1002655 JGI25159J45721_10026556 292
176 3300003187 JGI25151J46595_10002079 JGI25151J46595_100020796 292
177 3300003187 JGI25151J46595_10004212 JGI25151J46595_100042127 292
178 3300003187 JGI25151J46595_10004508 JGI25151J46595_100045085 292
179 3300003187 JGI25151J46595_10006825 JGI25151J46595_100068252 292
180 3300003187 JGI25151J46595_10007554 JGI25151J46595_100075543 292
181 3300003751 Ga0055538_1000379 Ga0055538_10003794 292
182 3300003758 Ga0055532_1000004 Ga0055532_1000004169 292
183 3300003758 Ga0055532_1000518 Ga0055532_10005186 292
184 3300005548 Ga0070665_100740604 Ga0070665_1007406041 292
185 3300005617 Ga0068859_100000055 Ga0068859_10000005569 292
186 3300005842 Ga0068858_100000242 Ga0068858_10000024210 292
187 3300005844 Ga0068862_100000039 Ga0068862_10000003914 292
188 3300006051 Ga0075364_10016092 Ga0075364_100160922 292
189 3300006931 Ga0097620_100000055 Ga0097620_10000005558 292
190 3300009011 Ga0105251_10009246 Ga0105251_100092464 292
191 3300009036 Ga0105244_10017729 Ga0105244_100177293 292
192 3300009092 Ga0105250_10001190 Ga0105250_100011907 292
193 3300009092 Ga0105250_10004506 Ga0105250_100045063 292
194 3300009094 Ga0111539_10237393 Ga0111539_102373932 292
195 3300011119 Ga0105246_10029942 Ga0105246_100299423 292
196 3300011119 Ga0105246_10175131 Ga0105246_101751313 292
197 3300013296 Ga0157374_10173337 Ga0157374_101733372 292
198 3300014325 Ga0163163_10034214 Ga0163163_100342142 292
199 3300014968 Ga0157379_10000099 Ga0157379_1000009910 292
200 3300025224 Ga0209784_100233 Ga0209784_10023316 292
201 3300025229 Ga0209147_100010 Ga0209147_100010332 292
202 3300025229 Ga0209147_100069 Ga0209147_100069122 292
203 3300025229 Ga0209147_102653 Ga0209147_1026532 292
204 3300025284 Ga0209130_1001414 Ga0209130_10014146 292
205 3300025292 Ga0209676_1000371 Ga0209676_100037140 292
206 3300025294 Ga0209025_1000218 Ga0209025_1000218102 292
207 3300025294 Ga0209025_1000751 Ga0209025_10007517 292
208 3300025294 Ga0209025_1001192 Ga0209025_100119221 292
209 3300025294 Ga0209025_1002725 Ga0209025_10027255 292
210 3300025294 Ga0209025_1004279 Ga0209025_10042797 292
211 3300025294 Ga0209025_1007396 Ga0209025_10073963 292
212 3300025294 Ga0209025_1026757 Ga0209025_10267572 292
213 3300025711 Ga0207696_1003120 Ga0207696_10031207 292
214 3300025711 Ga0207696_1003757 Ga0207696_10037573 292
215 3300025711 Ga0207696_1025605 Ga0207696_10256052 292
216 3300025728 Ga0207655_1039002 Ga0207655_10390022 292
217 3300025735 Ga0207713_1005673 Ga0207713_10056732 292
218 3300025735 Ga0207713_1011335 Ga0207713_10113354 292
219 3300025961 Ga0207712_10007940 Ga0207712_100079407 292
220 3300026035 Ga0207703_10000262 Ga0207703_1000026228 292
221 3300028380 Ga0268265_10000020 Ga0268265_1000002033 292
222 3300028800 Ga0265338_10029736 Ga0265338_100297365 292
223 3300028800 Ga0265338_10071730 Ga0265338_100717303 292
224 3300036647 Ga0316582_0228608 Ga0316582_0228608_324_1232 292
225 3300039062 Ga0400483_042907 Ga0400483_042907_7495_8427 292
226 3300039062 Ga0400483_170189 Ga0400483_170189_7687_8616 292
227 3300042876 Ga0451577_0036166 Ga0451577_0036166_2641_3546 292
228 3300042876 Ga0451577_0040051 Ga0451577_0040051_711_1616 292
229 3300044712 Ga0453684_0001553 Ga0453684_0001553_49116_50027 292
230 3300044712 Ga0453684_0001589 Ga0453684_0001589_11863_12747 292
231 3300044712 Ga0453684_0227570 Ga0453684_0227570_254_1159 292
232 3300045051 Ga0451576_0085958 Ga0451576_0085958_648_1553 292
233 3300046455 Ga0495603_0132087 Ga0495603_0132087_409_1305 292
234 3300046810 Ga0495660_0077232 Ga0495660_0077232_682_1563 292
235 3300047321 Ga0495676_0235170 Ga0495676_0235170_17_913 292
236 3300048905 Ga0496102_0030676 Ga0496102_0030676_487_1428 292
237 3300048906 Ga0496103_0132536 Ga0496103_0132536_638_1519 292
238 3300048907 Ga0496104_0223727 Ga0496104_0223727_16_978 292
239 3300048908 Ga0496105_0132986 Ga0496105_0132986_137_1099 292
240 3300048913 Ga0496110_0037847 Ga0496110_0037847_2284_3174 292
241 3300048915 Ga0496112_0132596 Ga0496112_0132596_1297_2178 292
242 3300048916 Ga0496113_0322026 Ga0496113_0322026_328_1209 292
243 3300048919 Ga0496116_0013529 Ga0496116_0013529_4911_5804 292
244 3300048925 Ga0496122_0123961 Ga0496122_0123961_462_1355 292
245 3300048925 Ga0496122_0144107 Ga0496122_0144107_89_982 292
246 3300048925 Ga0496122_0170466 Ga0496122_0170466_401_1294 292
247 3300048926 Ga0496123_0119540 Ga0496123_0119540_95_988 292
248 3300048926 Ga0496123_0144417 Ga0496123_0144417_303_1196 292
249 3300048927 Ga0496124_0108002 Ga0496124_0108002_152_1045 292
250 3300048928 Ga0496125_0023537 Ga0496125_0023537_2128_3021 292
251 3300048928 Ga0496125_0056735 Ga0496125_0056735_172_1065 292
252 3300049742 Ga0501080_0119398 Ga0501080_0119398_1016_1954 292
253 3300049742 Ga0501080_0142645 Ga0501080_0142645_480_1412 292
254 3300049742 Ga0501080_0539016 Ga0501080_0539016_31_951 292
255 3300061734 Ga0530510_0033275 Ga0530510_0033275_2769_3692 292
256 iso_pu_bacteria 2508501039 2508676588 292
257 iso_pu_bacteria 2517572101 2517763215 292
258 iso_pu_bacteria 2643221543 2643737295 292
259 iso_pu_bacteria 2675902999 2676200504 292
260 iso_pu_bacteria 2684623035 2686539484 292
261 iso_pu_bacteria 2773857921 2774845082 292
262 iso_pu_bacteria 2775507177 2777763249 292
263 iso_pu_bacteria 2821111986 2821115462 292
264 iso_pu_bacteria 2864733723 2864738252 292
265 iso_pu_bacteria 2885526491 2885530989 292
266 iso_pu_bacteria 2889042446 2889043535 292
267 iso_pu_bacteria 2895880812 2895890637 292
268 iso_pu_bacteria 2904113452 2904120044 292
269 iso_pu_bacteria 2904162308 2904166755 292
270 iso_pu_bacteria 2904490793 2904495272 292
271 iso_pu_bacteria 2919160200 2919163532 292
272 iso_pu_bacteria 2931384279 2931386996 292
273 iso_pu_bacteria 2939679117 2939682324 292
274 iso_pu_bacteria 2945991243 2945994405 292
275 iso_pu_bacteria 2946053406 2946057203 292
276 iso_pu_bacteria 8002775197 8002780352 292

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

33

193

0.98

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

195

315

0.97

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

33

127

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dll-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9734 7 286
4dll-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9694 5 292
1vpd-assembly1.cif.gz_A x-ray crystal structure of tartronate semialdehyde reductase [salmonella typhimurium lt2] 0.9644 7 291
4dll-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9595 5 292
3q3c-assembly1.cif.gz_A crystal structure of a serine dehydrogenase from pseudomonas aeruginosa pao1 in complex with nad 0.9568 6 289
ID Description Score Start End Superfamily
af_Q9C991_11_173_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.989 6 166 3.40.50.720
af_A0A1D6NCX6_182_311_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9856 169 291 1.10.1040.10
af_P77161_159_292_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9802 169 287 1.10.1040.10
5je8D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9774 5 166 3.40.50.720
af_Q4DFE2_166_292_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9754 168 288 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A649UZ05-F1-model_v4 3-hydroxyisobutyrate dehydrogenase 0.9965 173 286 GO:0051287
AF-A0A150MAW6-F1-model_v4 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.9947 165 292 GO:0008679
GO:0051287
AF-A0A356R5G1-F1-model_v4 Oxidoreductase 0.9909 3 286 GO:0016054
GO:0016491
GO:0050661
GO:0051287
AF-A0A4Y7IRB3-F1-model_v4 Uncharacterized protein 0.9905 6 291 GO:0043248
GO:0050661
GO:0051287
AF-R6VML8-F1-model_v4 deleted 0.9903 166 289

Feature Viewer

pLDDT pTM Quality
95.45 0.91 High
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Predicted Structure (AlphaFold2)

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