F381340

General Info

Members Datasets Scaffolds Average Seq Length
276 163 552 279

Family's Representative Sequence

Representative Sequence 3300046533|Ga0495640_0065511|Ga0495640_0065511_388_1407
Length 330
Sequence MQTRVMQNCLAIGDFARATHMSVKTLRYYHRVGLLEPADVDADTGYRRYTTGQIPTAQIIRRFRYLDMPVDEVRQVLEAPDIETRNELIAAHLNRLEEGLTRTQGAVSSLRDLLARPAPPELADVGRLRVAATPSAAISETLDIEDAGTWFQGALGELYATLEAQNLSPAGSSGGIFATELFSHGLGQATIFVPCAGSPKPMGRVTSLVVPPAEFATIIHPGAHTDVDRAYGSLATYVTQHALAVDGPIREYYLTYRRDTPDTSRWRTQICWPIFHTGPGPDDAERQPRLRGASVSTAISRATAPVKACSGGVAYPMTSAGPCGPGPGRP

Samples

Sample ID Description Type Environment
1 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
42 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
70 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
73 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
74 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
75 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
84 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
146 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
147 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
148 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
149 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
150 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
151 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
152 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
153 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
154 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
155 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
156 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
159 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
160 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
161 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
162 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
163 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.19
Metatranscriptomes 0.36
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.61
Nodule 0
Rhizoplane 2.9
Rhizosphere 84.06
Stem 0
Stem Tuber 0
Unclassified 3.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495640_0065511 3300046533 Bacteria 2453
2 JGI24740J21852_10016609 3300001979 Bacteria 2655
3 JGI24739J22299_10008950 3300001989 Bacteria 3736
4 JGI24735J21928_10031182 3300002067 Bacteria 1581
5 Ga0055535_1000357 3300003761 Bacteria 44443
6 Ga0055529_1000433 3300003763 Bacteria 42325
7 Ga0055529_1000701 3300003763 Bacteria 22558
8 Ga0055529_1000772 3300003763 Bacteria 20105
9 Ga0070682_100211416 3300005337 Bacteria 1375
10 Ga0068868_100574209 3300005338 Bacteria 996
11 Ga0070674_100299226 3300005356 Bacteria 1282
12 Ga0070667_100029877 3300005367 Bacteria 4544
13 Ga0070667_100216133 3300005367 Bacteria 1705
14 Ga0070703_10025089 3300005406 Bacteria 1766
15 Ga0070709_10002533 3300005434 Bacteria 9884
16 Ga0070709_10003748 3300005434 Bacteria 8170
17 Ga0070709_10005685 3300005434 Bacteria 6759
18 Ga0070714_100042874 3300005435 Bacteria 3824
19 Ga0070714_100050049 3300005435 Plasmid 3558
20 Ga0070714_100404151 3300005435 Unclassified 1291
21 Ga0070714_100646337 3300005435 Bacteria 1018
22 Ga0070713_100009138 3300005436 Bacteria 7072
23 Ga0070713_100024004 3300005436 Bacteria 4742
24 Ga0070713_100063517 3300005436 Bacteria 3096
25 Ga0070713_100342500 3300005436 Bacteria 1385
26 Ga0070713_100609155 3300005436 Bacteria 1038
27 Ga0070710_10004906 3300005437 Bacteria 6329
28 Ga0070710_10009022 3300005437 Bacteria 4874
29 Ga0070711_100018235 3300005439 Bacteria 4478
30 Ga0070711_100040559 3300005439 Bacteria 3140
31 Ga0070708_100014088 3300005445 Bacteria 6572
32 Ga0070708_100501821 3300005445 Bacteria 1145
33 Ga0070663_100079622 3300005455 Bacteria 2405
34 Ga0070706_100040320 3300005467 Bacteria 4310
35 Ga0070706_100163363 3300005467 Bacteria 2079
36 Ga0070706_100517127 3300005467 Unclassified 1110
37 Ga0070707_100004705 3300005468 Bacteria 12779
38 Ga0070707_100053562 3300005468 Unclassified 3868
39 Ga0070707_100112281 3300005468 Bacteria 2643
40 Ga0070707_100283853 3300005468 Bacteria 1609
41 Ga0070698_100010592 3300005471 Bacteria 9824
42 Ga0070698_100025923 3300005471 Bacteria 6107
43 Ga0070698_100046973 3300005471 Bacteria 4414
44 Ga0070698_100224950 3300005471 Bacteria 1810
45 Ga0070698_100228220 3300005471 Bacteria 1795
46 Ga0070699_100033996 3300005518 Bacteria 4406
47 Ga0070699_100043909 3300005518 Bacteria 3869
48 Ga0070699_100101649 3300005518 Bacteria 2520
49 Ga0070699_100276915 3300005518 Bacteria 1502
50 Ga0070697_100021999 3300005536 Bacteria 5059
51 Ga0070697_100044126 3300005536 Bacteria 3611
52 Ga0070665_100040440 3300005548 Bacteria 4687
53 Ga0068855_100024521 3300005563 Bacteria 7217
54 Ga0068854_100001256 3300005578 Bacteria 15227
55 Ga0068856_100049567 3300005614 Bacteria 4139
56 Ga0068856_100422422 3300005614 Bacteria 1353
57 Ga0068852_100006462 3300005616 Bacteria 8467
58 Ga0068852_100148262 3300005616 Bacteria 2178
59 Ga0081455_10012493 3300005937 Bacteria 8473
60 Ga0081455_10039387 3300005937 Bacteria 4177
61 Ga0081455_10081311 3300005937 Bacteria 2653
62 Ga0081540_1015218 3300005983 Bacteria 4879
63 Ga0070717_10024692 3300006028 Bacteria 4775
64 Ga0070717_10043582 3300006028 Bacteria 3663
65 Ga0070717_10069292 3300006028 Bacteria 2937
66 Ga0070717_10070792 3300006028 Bacteria 2907
67 Ga0070717_10097399 3300006028 Bacteria 2492
68 Ga0070717_10156687 3300006028 Bacteria 1973
69 Ga0070715_10022543 3300006163 Bacteria 2457
70 Ga0070715_10081252 3300006163 Bacteria 1472
71 Ga0070716_100008213 3300006173 Bacteria 5172
72 Ga0070716_100048593 3300006173 Bacteria 2399
73 Ga0070716_100209934 3300006173 Bacteria 1300
74 Ga0070712_100001165 3300006175 Bacteria 15922
75 Ga0070712_100014973 3300006175 Bacteria 4986
76 Ga0070712_100029487 3300006175 Bacteria 3678
77 Ga0070712_100103424 3300006175 Bacteria 2111
78 Ga0070712_100108897 3300006175 Bacteria 2063
79 Ga0070712_100345002 3300006175 Bacteria 1217
80 Ga0105240_10440276 3300009093 Bacteria 1460
81 Ga0105241_10000821 3300009174 Bacteria 23559
82 Ga0105248_10070206 3300009177 Bacteria 3934
83 Ga0105239_10390856 3300010375 Bacteria 1573
84 Ga0157372_10042454 3300013307 Bacteria 5030
85 Ga0157372_10311641 3300013307 Bacteria 1832
86 Ga0209258_100189 3300025242 Bacteria 128268
87 Ga0209759_1002030 3300025256 Bacteria 9567
88 Ga0209455_1000092 3300025272 Bacteria 220516
89 Ga0207692_10002962 3300025898 Bacteria 6579
90 Ga0207692_10006955 3300025898 Bacteria 4614
91 Ga0207692_10054983 3300025898 Bacteria 2035
92 Ga0207647_10009516 3300025904 Bacteria 6901
93 Ga0207647_10009719 3300025904 Bacteria 6824
94 Ga0207685_10017972 3300025905 Bacteria 2299
95 Ga0207685_10039844 3300025905 Bacteria 1747
96 Ga0207685_10178026 3300025905 Bacteria 984
97 Ga0207699_10007707 3300025906 Bacteria 5269
98 Ga0207699_10008083 3300025906 Bacteria 5172
99 Ga0207699_10009739 3300025906 Bacteria 4796
100 Ga0207699_10034008 3300025906 Bacteria 2886
101 Ga0207684_10036838 3300025910 Bacteria 4151
102 Ga0207684_10062840 3300025910 Bacteria 3152
103 Ga0207654_10233612 3300025911 Bacteria 1226
104 Ga0207695_10005394 3300025913 Bacteria 16988
105 Ga0207671_10000426 3300025914 Bacteria 58314
106 Ga0207693_10016877 3300025915 Bacteria 5829
107 Ga0207693_10066346 3300025915 Bacteria 2826
108 Ga0207693_10082021 3300025915 Bacteria 2525
109 Ga0207693_10319581 3300025915 Bacteria 1215
110 Ga0207646_10032993 3300025922 Bacteria 4684
111 Ga0207646_10035689 3300025922 Bacteria 4490
112 Ga0207646_10042405 3300025922 Bacteria 4087
113 Ga0207646_10305873 3300025922 Bacteria 1436
114 Ga0207687_10210967 3300025927 Bacteria 1523
115 Ga0207700_10001865 3300025928 Bacteria 11944
116 Ga0207700_10012598 3300025928 Bacteria 5462
117 Ga0207700_10018438 3300025928 Bacteria 4688
118 Ga0207700_10020414 3300025928 Bacteria 4499
119 Ga0207700_10041367 3300025928 Bacteria 3371
120 Ga0207700_10515277 3300025928 Bacteria 1059
121 Ga0207664_10003408 3300025929 Bacteria 10591
122 Ga0207664_10004127 3300025929 Bacteria 9804
123 Ga0207664_10055902 3300025929 Bacteria 3133
124 Ga0207664_10078709 3300025929 Bacteria 2674
125 Ga0207664_10119139 3300025929 Bacteria 2207
126 Ga0207664_10297060 3300025929 Unclassified 1420
127 Ga0207664_10374910 3300025929 Unclassified 1262
128 Ga0207665_10000097 3300025939 Bacteria 56851
129 Ga0207665_10012772 3300025939 Bacteria 5522
130 Ga0207665_10034526 3300025939 Bacteria 3356
131 Ga0207665_10055159 3300025939 Bacteria 2681
132 Ga0207711_10100113 3300025941 Bacteria 2563
133 Ga0207640_10001756 3300025981 Bacteria 11640
134 Ga0207658_10038432 3300025986 Bacteria 3448
135 Ga0207678_10105426 3300026067 Bacteria 2405
136 Ga0207702_10344772 3300026078 Bacteria 1424
137 Ga0207674_10021065 3300026116 Bacteria 7031
138 Ga0207698_10012375 3300026142 Bacteria 5580
139 Ga0268266_10038987 3300028379 Bacteria 4046
140 Ga0265338_10278391 3300028800 Bacteria 1223
141 Ga0307512_10003120 3300030522 Bacteria 19758
142 Ga0307513_10022670 3300031456 Bacteria 7369
143 Ga0307508_10003457 3300031616 Bacteria 15989
144 Ga0307507_10000715 3300033179 Bacteria 72957
145 Ga0373936_0002004 3300035113 Bacteria 7540
146 Ga0373956_0006467 3300035119 Bacteria 4699
147 Ga0373956_0031309 3300035119 Bacteria 2331
148 Ga0373957_0004920 3300035120 Bacteria 4108
149 Ga0373957_0045511 3300035120 Bacteria 1663
150 Ga0373943_0140986 3300035170 Bacteria 1299
151 Ga0373955_0001455 3300035172 Bacteria 10053
152 Ga0373924_0100417 3300035410 Bacteria 1244
153 Ga0373935_0017303 3300035692 Bacteria 4371
154 Ga0373933_0010303 3300035724 Bacteria 5122
155 Ga0373933_0029595 3300035724 Bacteria 3168
156 Ga0373947_0060717 3300035725 Bacteria 2296
157 Ga0373947_0179103 3300035725 Unclassified 1379
158 Ga0373937_0015246 3300036401 Bacteria 6795
159 Ga0372808_002153 3300036459 Bacteria 2219
160 Ga0373925_0000043 3300037068 Bacteria 134268
161 Ga0373925_0077444 3300037068 Bacteria 2523
162 Ga0436364_0465291 3300037853 Unclassified 1374
163 Ga0436360_0422722 3300039438 Bacteria 1270
164 Ga0439442_043832 3300042002 Bacteria 942
165 Ga0466961_0005143 3300044693 Bacteria 8230
166 Ga0495592_0145979 3300046454 Bacteria 1640
167 Ga0495592_0188538 3300046454 Bacteria 1399
168 Ga0495629_0056247 3300046459 Bacteria 2751
169 Ga0495651_0000984 3300046462 Bacteria 22098
170 Ga0495651_0010792 3300046462 Bacteria 7022
171 Ga0495651_0045080 3300046462 Bacteria 3416
172 Ga0495653_0006041 3300046463 Bacteria 9914
173 Ga0495653_0032199 3300046463 Bacteria 4165
174 Ga0495650_0065377 3300046471 Bacteria 1444
175 Ga0495662_0051900 3300046476 Bacteria 1979
176 Ga0495662_0164205 3300046476 Unclassified 1094
177 Ga0495664_0053568 3300046477 Bacteria 2399
178 Ga0495608_0000857 3300046511 Bacteria 21212
179 Ga0495608_0002320 3300046511 Bacteria 13733
180 Ga0495628_0006648 3300046516 Bacteria 10080
181 Ga0495628_0019514 3300046516 Bacteria 5602
182 Ga0495630_0062404 3300046517 Bacteria 2799
183 Ga0495630_0099918 3300046517 Bacteria 2195
184 Ga0495666_0016917 3300046526 Bacteria 3631
185 Ga0495652_0016820 3300046529 Bacteria 6535
186 Ga0495652_0079003 3300046529 Bacteria 2722
187 Ga0495652_0184368 3300046529 Bacteria 1598
188 Ga0495665_0021579 3300046531 Bacteria 3461
189 Ga0495640_0017668 3300046533 Bacteria 5308
190 Ga0495587_0003318 3300046536 Bacteria 10744
191 Ga0495587_0015722 3300046536 Bacteria 4720
192 Ga0495587_0169837 3300046536 Bacteria 1239
193 Ga0495645_0026458 3300046543 Bacteria 4211
194 Ga0495645_0036999 3300046543 Bacteria 3557
195 Ga0495622_0089748 3300046557 Bacteria 1412
196 Ga0495667_0000254 3300046559 Bacteria 34663
197 Ga0495634_0225761 3300046642 Bacteria 1154
198 Ga0495635_0003320 3300046663 Bacteria 11125
199 Ga0495635_0024825 3300046663 Bacteria 4176
200 Ga0495635_0168056 3300046663 Bacteria 1492
201 Ga0495635_0238112 3300046663 Bacteria 1228
202 Ga0495657_0012405 3300046675 Bacteria 6332
203 Ga0495599_0016705 3300046678 Bacteria 4558
204 Ga0495599_0051813 3300046678 Bacteria 2572
205 Ga0495646_0003993 3300046680 Bacteria 9238
206 Ga0495646_0147200 3300046680 Unclassified 1312
207 Ga0495624_0011705 3300046690 Bacteria 6026
208 Ga0495600_0014905 3300046809 Bacteria 4906
209 Ga0495600_0088465 3300046809 Bacteria 2020
210 Ga0495581_0044668 3300047315 Bacteria 2562
211 Ga0495604_0013935 3300047317 Bacteria 6413
212 Ga0495674_0016752 3300047319 Bacteria 6837
213 Ga0495674_0056986 3300047319 Bacteria 3421
214 Ga0495674_0233804 3300047319 Bacteria 1516
215 Ga0495676_0163246 3300047321 Unclassified 1574
216 Ga0495680_0021141 3300047322 Bacteria 5454
217 Ga0495680_0148930 3300047322 Bacteria 1707
218 Ga0495675_0003923 3300047444 Bacteria 9009
219 Ga0495684_0054323 3300047471 Bacteria 3055
220 Ga0495684_0086741 3300047471 Bacteria 2372
221 Ga0495602_0008969 3300048088 Bacteria 10423
222 Ga0495602_0037443 3300048088 Bacteria 4502
223 Ga0495602_0230755 3300048088 Bacteria 1391
224 Ga0496102_0365979 3300048905 Bacteria 1357
225 Ga0496104_0027972 3300048907 Bacteria 5222
226 Ga0496105_0083551 3300048908 Bacteria 2637
227 Ga0496112_0093140 3300048915 Bacteria 2983
228 Ga0496112_0353356 3300048915 Bacteria 1412
229 Ga0496114_0289914 3300048917 Bacteria 1444
230 Ga0496115_0001817 3300048918 Bacteria 15259
231 Ga0496115_0072978 3300048918 Bacteria 2785
232 Ga0496118_0066763 3300048921 Bacteria 2624
233 Ga0496121_0000233 3300048924 Bacteria 119434
234 Ga0496126_0000037 3300048929 Bacteria 353425
235 Ga0496126_0000928 3300048929 Bacteria 50618
236 Ga0501031_0008624 3300049568 Bacteria 6629
237 Ga0501032_0004915 3300049569 Bacteria 9999
238 Ga0501033_0037659 3300049570 Bacteria 3619
239 Ga0501034_0017473 3300049571 Bacteria 7356
240 Ga0501036_0047380 3300049572 Bacteria 3640
241 Ga0501037_0005319 3300049573 Bacteria 9362
242 Ga0501039_0136736 3300049575 Bacteria 1924
243 Ga0501043_0070855 3300049579 Bacteria 2738
244 Ga0501046_0034283 3300049580 Bacteria 4098
245 Ga0501047_0264635 3300049581 Bacteria 1566
246 Ga0501048_0011981 3300049582 Bacteria 6463
247 Ga0501068_0246770 3300049584 Bacteria 1137
248 Ga0501080_0608175 3300049742 Unclassified 970
249 Ga0501035_0020597 3300049822 Bacteria 6056
250 Ga0495601_0093357 3300053077 Bacteria 1938
251 Ga0495601_0093992 3300053077 Bacteria 1932
252 Ga0495601_0106977 3300053077 Bacteria 1809
253 Ga0495601_0108609 3300053077 Bacteria 1795
254 Ga0495612_0057691 3300053078 Bacteria 1603
255 Ga0495612_0067000 3300053078 Bacteria 1493
256 Ga0495595_0038697 3300053084 Bacteria 2174
257 Ga0495619_0023161 3300053085 Bacteria 3979
258 Ga0500644_0028948 3300053088 Bacteria 1737
259 Ga0500651_0024449 3300053093 Bacteria 3788
260 Ga0500566_0005464 3300053094 Bacteria 7560
261 Ga0500640_012873 3300053095 Bacteria 3447
262 Ga0500650_0013147 3300053098 Bacteria 3465
263 Ga0500554_000214 3300053102 Bacteria 12346
264 Ga0500572_002591 3300053111 Bacteria 4297
265 Ga0500594_0003466 3300053118 Bacteria 3468
266 Ga0500595_000344 3300053119 Bacteria 30268
267 Ga0500597_024451 3300053120 Bacteria 2426
268 Ga0500614_000466 3300053123 Bacteria 10533
269 Ga0500652_074529 3300053131 Bacteria 1409
270 Ga0500559_0008156 3300053136 Bacteria 4607
271 Ga0500585_032392 3300053144 Bacteria 1807
272 Ga0500633_0035022 3300053160 Bacteria 1651
273 2753037096 2751185725 Bacteria 5740550
274 2753324965 2751185792 Bacteria 5739090
275 2995470017 2995463766 Bacteria 8577691
276 3003001336 3002998708 Bacteria 11715108
277 Ga0495640_0065511
278 JGI24740J21852_10016609
279 JGI24739J22299_10008950
280 JGI24735J21928_10031182
281 Ga0055535_1000357
282 Ga0055529_1000433
283 Ga0055529_1000701
284 Ga0055529_1000772
285 Ga0070682_100211416
286 Ga0068868_100574209
287 Ga0070674_100299226
288 Ga0070667_100029877
289 Ga0070667_100216133
290 Ga0070703_10025089
291 Ga0070709_10002533
292 Ga0070709_10003748
293 Ga0070709_10005685
294 Ga0070714_100042874
295 Ga0070714_100050049
296 Ga0070714_100404151
297 Ga0070714_100646337
298 Ga0070713_100009138
299 Ga0070713_100024004
300 Ga0070713_100063517
301 Ga0070713_100342500
302 Ga0070713_100609155
303 Ga0070710_10004906
304 Ga0070710_10009022
305 Ga0070711_100018235
306 Ga0070711_100040559
307 Ga0070708_100014088
308 Ga0070708_100501821
309 Ga0070663_100079622
310 Ga0070706_100040320
311 Ga0070706_100163363
312 Ga0070706_100517127
313 Ga0070707_100004705
314 Ga0070707_100053562
315 Ga0070707_100112281
316 Ga0070707_100283853
317 Ga0070698_100010592
318 Ga0070698_100025923
319 Ga0070698_100046973
320 Ga0070698_100224950
321 Ga0070698_100228220
322 Ga0070699_100033996
323 Ga0070699_100043909
324 Ga0070699_100101649
325 Ga0070699_100276915
326 Ga0070697_100021999
327 Ga0070697_100044126
328 Ga0070665_100040440
329 Ga0068855_100024521
330 Ga0068854_100001256
331 Ga0068856_100049567
332 Ga0068856_100422422
333 Ga0068852_100006462
334 Ga0068852_100148262
335 Ga0081455_10012493
336 Ga0081455_10039387
337 Ga0081455_10081311
338 Ga0081540_1015218
339 Ga0070717_10024692
340 Ga0070717_10043582
341 Ga0070717_10069292
342 Ga0070717_10070792
343 Ga0070717_10097399
344 Ga0070717_10156687
345 Ga0070715_10022543
346 Ga0070715_10081252
347 Ga0070716_100008213
348 Ga0070716_100048593
349 Ga0070716_100209934
350 Ga0070712_100001165
351 Ga0070712_100014973
352 Ga0070712_100029487
353 Ga0070712_100103424
354 Ga0070712_100108897
355 Ga0070712_100345002
356 Ga0105240_10440276
357 Ga0105241_10000821
358 Ga0105248_10070206
359 Ga0105239_10390856
360 Ga0157372_10042454
361 Ga0157372_10311641
362 Ga0209258_100189
363 Ga0209759_1002030
364 Ga0209455_1000092
365 Ga0207692_10002962
366 Ga0207692_10006955
367 Ga0207692_10054983
368 Ga0207647_10009516
369 Ga0207647_10009719
370 Ga0207685_10017972
371 Ga0207685_10039844
372 Ga0207685_10178026
373 Ga0207699_10007707
374 Ga0207699_10008083
375 Ga0207699_10009739
376 Ga0207699_10034008
377 Ga0207684_10036838
378 Ga0207684_10062840
379 Ga0207654_10233612
380 Ga0207695_10005394
381 Ga0207671_10000426
382 Ga0207693_10016877
383 Ga0207693_10066346
384 Ga0207693_10082021
385 Ga0207693_10319581
386 Ga0207646_10032993
387 Ga0207646_10035689
388 Ga0207646_10042405
389 Ga0207646_10305873
390 Ga0207687_10210967
391 Ga0207700_10001865
392 Ga0207700_10012598
393 Ga0207700_10018438
394 Ga0207700_10020414
395 Ga0207700_10041367
396 Ga0207700_10515277
397 Ga0207664_10003408
398 Ga0207664_10004127
399 Ga0207664_10055902
400 Ga0207664_10078709
401 Ga0207664_10119139
402 Ga0207664_10297060
403 Ga0207664_10374910
404 Ga0207665_10000097
405 Ga0207665_10012772
406 Ga0207665_10034526
407 Ga0207665_10055159
408 Ga0207711_10100113
409 Ga0207640_10001756
410 Ga0207658_10038432
411 Ga0207678_10105426
412 Ga0207702_10344772
413 Ga0207674_10021065
414 Ga0207698_10012375
415 Ga0268266_10038987
416 Ga0265338_10278391
417 Ga0307512_10003120
418 Ga0307513_10022670
419 Ga0307508_10003457
420 Ga0307507_10000715
421 Ga0373936_0002004
422 Ga0373956_0006467
423 Ga0373956_0031309
424 Ga0373957_0004920
425 Ga0373957_0045511
426 Ga0373943_0140986
427 Ga0373955_0001455
428 Ga0373924_0100417
429 Ga0373935_0017303
430 Ga0373933_0010303
431 Ga0373933_0029595
432 Ga0373947_0060717
433 Ga0373947_0179103
434 Ga0373937_0015246
435 Ga0372808_002153
436 Ga0373925_0000043
437 Ga0373925_0077444
438 Ga0436364_0465291
439 Ga0436360_0422722
440 Ga0439442_043832
441 Ga0466961_0005143
442 Ga0495592_0145979
443 Ga0495592_0188538
444 Ga0495629_0056247
445 Ga0495651_0000984
446 Ga0495651_0010792
447 Ga0495651_0045080
448 Ga0495653_0006041
449 Ga0495653_0032199
450 Ga0495650_0065377
451 Ga0495662_0051900
452 Ga0495662_0164205
453 Ga0495664_0053568
454 Ga0495608_0000857
455 Ga0495608_0002320
456 Ga0495628_0006648
457 Ga0495628_0019514
458 Ga0495630_0062404
459 Ga0495630_0099918
460 Ga0495666_0016917
461 Ga0495652_0016820
462 Ga0495652_0079003
463 Ga0495652_0184368
464 Ga0495665_0021579
465 Ga0495640_0017668
466 Ga0495587_0003318
467 Ga0495587_0015722
468 Ga0495587_0169837
469 Ga0495645_0026458
470 Ga0495645_0036999
471 Ga0495622_0089748
472 Ga0495667_0000254
473 Ga0495634_0225761
474 Ga0495635_0003320
475 Ga0495635_0024825
476 Ga0495635_0168056
477 Ga0495635_0238112
478 Ga0495657_0012405
479 Ga0495599_0016705
480 Ga0495599_0051813
481 Ga0495646_0003993
482 Ga0495646_0147200
483 Ga0495624_0011705
484 Ga0495600_0014905
485 Ga0495600_0088465
486 Ga0495581_0044668
487 Ga0495604_0013935
488 Ga0495674_0016752
489 Ga0495674_0056986
490 Ga0495674_0233804
491 Ga0495676_0163246
492 Ga0495680_0021141
493 Ga0495680_0148930
494 Ga0495675_0003923
495 Ga0495684_0054323
496 Ga0495684_0086741
497 Ga0495602_0008969
498 Ga0495602_0037443
499 Ga0495602_0230755
500 Ga0496102_0365979
501 Ga0496104_0027972
502 Ga0496105_0083551
503 Ga0496112_0093140
504 Ga0496112_0353356
505 Ga0496114_0289914
506 Ga0496115_0001817
507 Ga0496115_0072978
508 Ga0496118_0066763
509 Ga0496121_0000233
510 Ga0496126_0000037
511 Ga0496126_0000928
512 Ga0501031_0008624
513 Ga0501032_0004915
514 Ga0501033_0037659
515 Ga0501034_0017473
516 Ga0501036_0047380
517 Ga0501037_0005319
518 Ga0501039_0136736
519 Ga0501043_0070855
520 Ga0501046_0034283
521 Ga0501047_0264635
522 Ga0501048_0011981
523 Ga0501068_0246770
524 Ga0501080_0608175
525 Ga0501035_0020597
526 Ga0495601_0093357
527 Ga0495601_0093992
528 Ga0495601_0106977
529 Ga0495601_0108609
530 Ga0495612_0057691
531 Ga0495612_0067000
532 Ga0495595_0038697
533 Ga0495619_0023161
534 Ga0500644_0028948
535 Ga0500651_0024449
536 Ga0500566_0005464
537 Ga0500640_012873
538 Ga0500650_0013147
539 Ga0500554_000214
540 Ga0500572_002591
541 Ga0500594_0003466
542 Ga0500595_000344
543 Ga0500597_024451
544 Ga0500614_000466
545 Ga0500652_074529
546 Ga0500559_0008156
547 Ga0500585_032392
548 Ga0500633_0035022
549 2753037096
550 2753324965
551 2995470017
552 3003001336

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13411

MerR_1

MerR HTH family regulatory protein

10

80

0.97

PF00376

MerR

MerR family regulatory protein

12

49

0.91

PF06445

GyrI-like

GyrI-like small molecule binding domain

128

274

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tea-assembly2.cif.gz_C crystal structure of s. aureus glnr-dna complex 0.9073 3 74
4r4e-assembly1.cif.gz_B structure of glnr-dna complex 0.8912 5 73
5i44-assembly4.cif.gz_G-2 structure of raca-dna complex; p21 form 0.8689 3 68
5i44-assembly4.cif.gz_E structure of raca-dna complex; p21 form 0.8585 3 68
1jbg-assembly1.cif.gz_A-2 crystal structure of mtan, the bacillus subtilis multidrug transporter activator, n-terminus 0.856 5 109
ID Description Score Start End Superfamily
1exjA02 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9378 2 70 1.10.1660.10
3d6zA01 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9292 1 70 1.10.1660.10
3iaoA01 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.887 3 74 1.10.1660.10
1exjA02 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.8776 2 70 1.10.1660.10
af_P33358_1_73_1.10.1660.10 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.8736 4 73 1.10.1660.10
ID Description Score Start End GO Terms
AF-A0A2D3UB07-F1-model_v4 deleted 0.9942 4 72
AF-A0A7D3W1L5-F1-model_v4 MerR family transcriptional regulator 0.9663 4 266 GO:0003677
GO:0003700
AF-A0A4U3BJM3-F1-model_v4 deleted 0.9619 5 109
AF-A0A8A9AB85-F1-model_v4 deleted 0.9578 4 104
AF-A0A1C4KZ20-F1-model_v4 DNA-binding transcriptional regulator, MerR family 0.956 4 266 GO:0003677
GO:0003700

Map