F381012

General Info

Members Datasets Scaffolds Average Seq Length
276 178 552 544

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100000262|Ga0068862_10000026226
Length 545
Sequence MEFVQDAPVLGPTFTDDRVLRSYLARALPDSARTSIEPDLHELGAHAASAWQIARARTPCEPSLTQWDAWGERIDRIEITPVWREGAAMTTRYGFVAAGHDGAHREFARIDQFARVYLYHVASEFYTCPLAMSDGAATALKASGHRALIERAVPRLLARDPAALWLSGQWMTETAGGSDVGNTQTIARRDGARWRLYGRKWFTSAVVGEMALTLARPEGAGEGADALALFYVETRDDNGRWNGIRIDRLKDKLGTRELPTAEIHLDGAITEPVGELAHGVRLIAPVLNVTRTWNTICALATMRRSIALATDYARRRRAFGRPLIEQPLHVATLASMQAEFEAAFQLGFHVAGLLGRTEHGSASDDERALLRILTPVAKLWTGKLAVGIASEACEAFGGAGYIENTGLPLMLRDAQVYPIWEGTTNVLALDLLRVLAKTGLDPVRRAIEDLLTAHEHSAAVRGAFDAASRWLAAHANRRDELEAGARGMALTLARTFAAALLSRHAAWASERGDDRPRAALAVFVGRGLVRLPAHDVAAHRDLLAG

Samples

Sample ID Description Type Environment
1 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
45 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
46 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
47 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
52 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
54 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
55 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
58 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
103 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
111 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
117 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
131 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
150 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
151 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
152 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
153 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
158 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
159 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
160 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
161 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
162 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
163 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
164 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
165 2734482264 Dyella sp. AD052 Isolate Unclassified
166 2738543009 Luteibacter sp. OK325 Isolate Unclassified
167 2739367700 Dyella sp. YR388 Isolate Unclassified
168 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
169 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
170 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
171 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
172 2884411467 Dyella sp. AD56 Isolate Rhizosphere
173 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
174 2919085039 Luteibacter sp. 1214 Isolate Unclassified
175 2919404418 Luteibacter sp. 3190 Isolate Unclassified
176 2928963466 Dyella japonica 1073 Isolate Unclassified
177 2941471342 Luteibacter sp. 621 Isolate Unclassified
178 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.94
Metatranscriptomes 1.09
Isolates 7.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.3
Nodule 0
Rhizoplane 1.81
Rhizosphere 65.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068862_100000262 3300005844 Bacteria 58677
2 JGI24739J22299_10000254 3300001989 Bacteria 17958
3 JGI24737J22298_10000857 3300001990 Bacteria 10849
4 JGI25156J39149_1003332 3300002705 Bacteria 5308
5 JGI25162J39368_1003149 3300002737 Bacteria 5189
6 JGI25157J39369_1000869 3300002741 Bacteria 14630
7 Ga0006562J51391_1067334 3300003578 Bacteria 2930
8 Ga0006562J51391_1067335 3300003578 Bacteria 2914
9 Ga0006562J51391_1090404 3300003578 Bacteria 8254
10 Ga0055525_1000111 3300003759 Bacteria 127836
11 Ga0055527_1000053 3300003760 Bacteria 100725
12 Ga0055527_1000405 3300003760 Bacteria 18026
13 Ga0055535_1000362 3300003761 Bacteria 43772
14 Ga0055535_1001008 3300003761 Bacteria 18009
15 Ga0055535_1001257 3300003761 Bacteria 13972
16 Ga0055542_1000371 3300003762 Bacteria 46425
17 Ga0055542_1000514 3300003762 Bacteria 35180
18 Ga0055542_1000746 3300003762 Bacteria 25060
19 Ga0055542_1001005 3300003762 Bacteria 18009
20 Ga0055529_1000637 3300003763 Bacteria 25807
21 Ga0055529_1000843 3300003763 Bacteria 18009
22 Ga0070666_10108444 3300005335 Bacteria 1919
23 Ga0070682_100004878 3300005337 Bacteria 7445
24 Ga0070660_100018609 3300005339 Bacteria 5078
25 Ga0070661_100010729 3300005344 Bacteria 6375
26 Ga0070661_100036544 3300005344 Bacteria 3571
27 Ga0070659_100003947 3300005366 Bacteria 10551
28 Ga0070667_100003804 3300005367 Bacteria 12831
29 Ga0070663_100024477 3300005455 Bacteria 4065
30 Ga0070685_10013744 3300005466 Bacteria 4277
31 Ga0070679_100022068 3300005530 Bacteria 6219
32 Ga0068853_100010102 3300005539 Bacteria 7627
33 Ga0070686_100000015 3300005544 Bacteria 158823
34 Ga0070665_100000400 3300005548 Bacteria 63418
35 Ga0070665_100012058 3300005548 Bacteria 8721
36 Ga0070665_100075813 3300005548 Bacteria 3370
37 Ga0068855_100063400 3300005563 Bacteria 4313
38 Ga0068857_100000445 3300005577 Bacteria 29380
39 Ga0068854_100013089 3300005578 Bacteria 5438
40 Ga0068854_100026021 3300005578 Bacteria 4017
41 Ga0068859_100003681 3300005617 Bacteria 15616
42 Ga0068851_10008535 3300005834 Bacteria 4740
43 Ga0068865_100015543 3300006881 Bacteria 4856
44 Ga0097620_100003681 3300006931 Bacteria 15616
45 Ga0105240_10016397 3300009093 Bacteria 10031
46 Ga0105240_10092355 3300009093 Bacteria 3696
47 Ga0105247_10017334 3300009101 Bacteria 4324
48 Ga0105247_10048328 3300009101 Bacteria 2613
49 Ga0105248_10012251 3300009177 Bacteria 9456
50 Ga0105237_10001063 3300009545 Bacteria 36895
51 Ga0105237_10001798 3300009545 Bacteria 27695
52 Ga0105238_10008534 3300009551 Bacteria 10254
53 Ga0105238_10211680 3300009551 Bacteria 1915
54 Ga0105239_10002290 3300010375 Bacteria 24460
55 Ga0105239_10038685 3300010375 Bacteria 5227
56 Ga0157314_1000038 3300012500 Bacteria 12920
57 Ga0157370_10068946 3300013104 Bacteria 3341
58 Ga0157370_10102698 3300013104 Bacteria 2677
59 Ga0157369_10001164 3300013105 Bacteria 32826
60 Ga0163162_10063999 3300013306 Bacteria 3722
61 Ga0157372_10076530 3300013307 Bacteria 3778
62 Ga0182006_1000062 3300015261 Bacteria 155622
63 Ga0182005_1000035 3300015265 Bacteria 172168
64 Ga0183369_1007 3300015685 Bacteria 414878
65 Ga0183368_1002 3300015687 Bacteria 1865598
66 Ga0209566_103331 3300025225 Bacteria 2514
67 Ga0209674_100077 3300025226 Bacteria 206312
68 Ga0209674_100222 3300025226 Bacteria 52576
69 Ga0209672_100004 3300025228 Bacteria 1467504
70 Ga0209672_100022 3300025228 Bacteria 374313
71 Ga0209672_100355 3300025228 Bacteria 29113
72 Ga0209672_100943 3300025228 Bacteria 12986
73 Ga0209563_100103 3300025230 Bacteria 151835
74 Ga0209437_100076 3300025233 Bacteria 295194
75 Ga0209258_100003 3300025242 Bacteria 1467504
76 Ga0209258_100004 3300025242 Bacteria 1376422
77 Ga0209258_100606 3300025242 Bacteria 29075
78 Ga0209258_101560 3300025242 Bacteria 7660
79 Ga0209646_1003552 3300025246 Bacteria 3047
80 Ga0209026_1000155 3300025250 Bacteria 108684
81 Ga0209026_1000668 3300025250 Bacteria 20806
82 Ga0209677_102154 3300025253 Bacteria 7699
83 Ga0209148_1000002 3300025254 Bacteria 2399500
84 Ga0209148_1000025 3300025254 Bacteria 663262
85 Ga0209148_1000083 3300025254 Bacteria 270142
86 Ga0209148_1000668 3300025254 Bacteria 29075
87 Ga0209759_1001156 3300025256 Bacteria 16768
88 Ga0209455_1000004 3300025272 Bacteria 1467504
89 Ga0209455_1000084 3300025272 Bacteria 253164
90 Ga0209455_1000095 3300025272 Bacteria 217487
91 Ga0209455_1002893 3300025272 Bacteria 6338
92 Ga0209758_1005918 3300025297 Bacteria 9093
93 Ga0209051_1010701 3300025303 Bacteria 4597
94 Ga0207656_10003152 3300025321 Bacteria 5638
95 Ga0207680_10000001 3300025903 Bacteria 1091453
96 Ga0207647_10000191 3300025904 Bacteria 49647
97 Ga0207695_10001097 3300025913 Bacteria 47167
98 Ga0207695_10003710 3300025913 Bacteria 21274
99 Ga0207671_10000057 3300025914 Bacteria 183729
100 Ga0207671_10001085 3300025914 Bacteria 32918
101 Ga0207649_10017372 3300025920 Bacteria 4077
102 Ga0207652_10018247 3300025921 Bacteria 5754
103 Ga0207694_10000283 3300025924 Bacteria 47844
104 Ga0207650_10037058 3300025925 Bacteria 3551
105 Ga0207690_10001379 3300025932 Bacteria 15251
106 Ga0207667_10000851 3300025949 Bacteria 39363
107 Ga0207667_10027479 3300025949 Bacteria 6192
108 Ga0207640_10002215 3300025981 Bacteria 10456
109 Ga0207639_10006697 3300026041 Bacteria 7835
110 Ga0207678_10002645 3300026067 Bacteria 16279
111 Ga0207678_10006639 3300026067 Bacteria 10257
112 Ga0207702_10004258 3300026078 Bacteria 12772
113 Ga0207641_10050461 3300026088 Bacteria 3520
114 Ga0268266_10000001 3300028379 Bacteria 4040580
115 Ga0268266_10000059 3300028379 Bacteria 269485
116 Ga0268265_10000196 3300028380 Bacteria 70684
117 Ga0268264_10066170 3300028381 Bacteria 3047
118 Ga0307510_10000254 3300033180 Bacteria 48493
119 Ga0395899_0000110 3300037312 Bacteria 140811
120 Ga0395900_0000012 3300037418 Bacteria 401198
121 Ga0395900_0023675 3300037418 Bacteria 6282
122 Ga0395898_0000237 3300037466 Bacteria 139991
123 Ga0395898_0004261 3300037466 Bacteria 15688
124 Ga0395901_0000161 3300038443 Bacteria 87191
125 Ga0395901_0182837 3300038443 Bacteria 2199
126 Ga0466969_0002609 3300044656 Bacteria 9640
127 Ga0466969_0003679 3300044656 Bacteria 8162
128 Ga0466982_0000057 3300044672 Bacteria 30543
129 Ga0466961_0004203 3300044693 Bacteria 9006
130 Ga0466961_0007107 3300044693 Bacteria 7121
131 Ga0466971_0002010 3300044719 Bacteria 8610
132 Ga0466971_0008316 3300044719 Bacteria 4527
133 Ga0466968_0001537 3300044735 Bacteria 8294
134 Ga0466970_0000034 3300044765 Bacteria 50551
135 Ga0466970_0002862 3300044765 Bacteria 8344
136 Ga0466970_0017702 3300044765 Bacteria 3684
137 Ga0466957_0019997 3300044842 Bacteria 3940
138 Ga0466959_0000091 3300045049 Bacteria 57419
139 Ga0466959_0001655 3300045049 Bacteria 13794
140 Ga0466959_0024003 3300045049 Bacteria 4515
141 Ga0466959_0084314 3300045049 Bacteria 2287
142 Ga0466958_0016786 3300045836 Bacteria 4222
143 Ga0466958_0038027 3300045836 Bacteria 2886
144 Ga0495617_000035 3300046452 Bacteria 145195
145 Ga0495617_000456 3300046452 Bacteria 22026
146 Ga0495638_0000019 3300046460 Bacteria 384671
147 Ga0495638_0000059 3300046460 Bacteria 191461
148 Ga0495638_0000288 3300046460 Bacteria 66416
149 Ga0495638_0000619 3300046460 Bacteria 39373
150 Ga0495638_0045040 3300046460 Bacteria 2777
151 Ga0495650_0000206 3300046471 Bacteria 127713
152 Ga0495650_0001006 3300046471 Bacteria 31810
153 Ga0495650_0002043 3300046471 Bacteria 17625
154 Ga0495584_0001286 3300046491 Bacteria 15276
155 Ga0495585_0000131 3300046492 Bacteria 81427
156 Ga0495585_0001877 3300046492 Bacteria 15839
157 Ga0495607_0034793 3300046501 Bacteria 3054
158 Ga0495606_0000299 3300046507 Bacteria 85585
159 Ga0495606_0001067 3300046507 Bacteria 39618
160 Ga0495606_0001786 3300046507 Bacteria 27423
161 Ga0495606_0065703 3300046507 Bacteria 2303
162 Ga0495616_0000027 3300046513 Bacteria 136712
163 Ga0495620_0000643 3300046515 Bacteria 21738
164 Ga0495620_0020387 3300046515 Bacteria 3238
165 Ga0495631_0000079 3300046518 Bacteria 62947
166 Ga0495631_0000249 3300046518 Bacteria 37329
167 Ga0495632_0000019 3300046519 Bacteria 215713
168 Ga0495632_0017362 3300046519 Bacteria 3975
169 Ga0495632_0035678 3300046519 Bacteria 2536
170 Ga0495648_0001174 3300046524 Bacteria 26456
171 Ga0495648_0002200 3300046524 Bacteria 18269
172 Ga0495609_0009949 3300046538 Bacteria 4580
173 Ga0495668_0057760 3300046616 Bacteria 2141
174 Ga0495668_0101163 3300046616 Bacteria 1577
175 Ga0495611_0000001 3300046648 Bacteria 2628469
176 Ga0495611_0000027 3300046648 Bacteria 116663
177 Ga0495625_0000037 3300046660 Bacteria 219383
178 Ga0495625_0045924 3300046660 Bacteria 3154
179 Ga0495625_0122235 3300046660 Bacteria 1770
180 Ga0495661_0008428 3300046665 Bacteria 7128
181 Ga0495670_0000760 3300046691 Bacteria 15478
182 Ga0495670_0001336 3300046691 Bacteria 12035
183 Ga0495671_0004626 3300046692 Bacteria 8164
184 Ga0495649_0013040 3300046694 Bacteria 4806
185 Ga0495589_0000051 3300046794 Bacteria 113624
186 Ga0495660_0000324 3300046810 Bacteria 42272
187 Ga0495660_0000329 3300046810 Bacteria 42056
188 Ga0495679_000001 3300047446 Bacteria 1607568
189 Ga0495673_0000010 3300047469 Bacteria 709599
190 Ga0495673_0000072 3300047469 Bacteria 213166
191 Ga0495686_0000189 3300047472 Bacteria 115804
192 Ga0495686_0001411 3300047472 Bacteria 26403
193 Ga0496106_0000484 3300048909 Bacteria 28287
194 Ga0496106_0042002 3300048909 Bacteria 3428
195 Ga0496113_0038682 3300048916 Bacteria 3508
196 Ga0496115_0000175 3300048918 Bacteria 59610
197 Ga0496115_0000383 3300048918 Bacteria 36509
198 Ga0496117_0003980 3300048920 Bacteria 16691
199 Ga0496118_0000953 3300048921 Bacteria 45266
200 Ga0496118_0002604 3300048921 Bacteria 23997
201 Ga0496118_0003759 3300048921 Bacteria 18755
202 Ga0496121_0000493 3300048924 Bacteria 75558
203 Ga0496121_0001210 3300048924 Bacteria 45020
204 Ga0496121_0002713 3300048924 Bacteria 26462
205 Ga0496122_0029864 3300048925 Bacteria 4584
206 Ga0496123_0004778 3300048926 Bacteria 14002
207 Ga0496123_0032291 3300048926 Bacteria 3794
208 Ga0496124_0008813 3300048927 Bacteria 10477
209 Ga0496125_0003336 3300048928 Bacteria 19575
210 Ga0496125_0025314 3300048928 Bacteria 5437
211 Ga0496126_0018196 3300048929 Bacteria 6972
212 Ga0496126_0045151 3300048929 Bacteria 4052
213 Ga0496126_0172068 3300048929 Bacteria 1844
214 Ga0495678_000028 3300049459 Bacteria 220080
215 Ga0495682_0001444 3300049460 Bacteria 12836
216 Ga0495682_0035995 3300049460 Bacteria 1822
217 Ga0501031_0001173 3300049568 Bacteria 15943
218 Ga0501032_0001856 3300049569 Bacteria 16712
219 Ga0501032_0020963 3300049569 Bacteria 4547
220 Ga0501033_0010213 3300049570 Bacteria 7208
221 Ga0501034_0005105 3300049571 Bacteria 14410
222 Ga0501034_0062787 3300049571 Bacteria 3730
223 Ga0501037_0017131 3300049573 Bacteria 5332
224 Ga0501037_0033736 3300049573 Bacteria 3779
225 Ga0501038_0002196 3300049574 Bacteria 18148
226 Ga0501039_0048203 3300049575 Bacteria 3293
227 Ga0501039_0137815 3300049575 Bacteria 1916
228 Ga0501043_0014327 3300049579 Bacteria 6205
229 Ga0501043_0041584 3300049579 Bacteria 3611
230 Ga0501043_0149280 3300049579 Bacteria 1829
231 Ga0501046_0040278 3300049580 Bacteria 3735
232 Ga0501046_0056463 3300049580 Bacteria 3082
233 Ga0501047_0016869 3300049581 Bacteria 6980
234 Ga0501047_0019509 3300049581 Bacteria 6504
235 Ga0501048_0030485 3300049582 Bacteria 3903
236 Ga0501070_0014723 3300049586 Bacteria 6581
237 Ga0501070_0024622 3300049586 Bacteria 5047
238 Ga0501073_0010646 3300049589 Bacteria 6732
239 Ga0501073_0120427 3300049589 Bacteria 1819
240 Ga0501080_0006056 3300049742 Bacteria 10843
241 Ga0501083_0043197 3300049744 Bacteria 3054
242 Ga0501035_0003959 3300049822 Bacteria 14126
243 Ga0501044_0005362 3300049823 Bacteria 14250
244 Ga0501044_0040680 3300049823 Bacteria 4844
245 Ga0501044_0146845 3300049823 Bacteria 2343
246 nmdc:mga0sz30_5481_c1 3300050516 Bacteria 4245
247 Ga0500610_0000528 3300053079 Bacteria 11780
248 Ga0500643_000053 3300053087 Bacteria 142202
249 Ga0500651_0001296 3300053093 Bacteria 12471
250 Ga0500651_0002079 3300053093 Bacteria 10396
251 Ga0500568_0000426 3300053139 Bacteria 31866
252 Ga0500645_001966 3300053730 Bacteria 9710
253 Ga0500661_008518 3300055283 Bacteria 1887
254 Ga0501082_0007909 3300060353 Bacteria 9181
255 2538833435 2537561836 Bacteria 3910579
256 2595448180 2593339238 Bacteria 4182970
257 2595451458 2593339239 Bacteria 4124669
258 2643829490 2643221562 Bacteria 4048635
259 2643895249 2643221577 Bacteria 3710843
260 2644477421 2643221685 Bacteria 3673288
261 2687584079 2687453130 Bacteria 4227172
262 2721028500 2718218334 Bacteria 4765486
263 2735835911 2734482264 Unclassified 5014763
264 2739229186 2738543009 Bacteria 4944499
265 2739732170 2739367700 Bacteria 4747630
266 2819563283 2818991440 Bacteria 4774720
267 2842915114 2842914999 Bacteria 4419378
268 2842921479 2842918807 Bacteria 4289178
269 2884339712 2884338543 Bacteria 4610696
270 2884413693 2884411467 Bacteria 5246714
271 2904464408 2904463128 Bacteria 4775606
272 2919088939 2919085039 Bacteria 4532964
273 2919404538 2919404418 Bacteria 4232372
274 2928964857 2928963466 Bacteria 5165703
275 2941472585 2941471342 Bacteria 5018624
276 2953997467 2953994433 Bacteria 4303959
277 Ga0068862_100000262
278 JGI24739J22299_10000254
279 JGI24737J22298_10000857
280 JGI25156J39149_1003332
281 JGI25162J39368_1003149
282 JGI25157J39369_1000869
283 Ga0006562J51391_1067334
284 Ga0006562J51391_1067335
285 Ga0006562J51391_1090404
286 Ga0055525_1000111
287 Ga0055527_1000053
288 Ga0055527_1000405
289 Ga0055535_1000362
290 Ga0055535_1001008
291 Ga0055535_1001257
292 Ga0055542_1000371
293 Ga0055542_1000514
294 Ga0055542_1000746
295 Ga0055542_1001005
296 Ga0055529_1000637
297 Ga0055529_1000843
298 Ga0070666_10108444
299 Ga0070682_100004878
300 Ga0070660_100018609
301 Ga0070661_100010729
302 Ga0070661_100036544
303 Ga0070659_100003947
304 Ga0070667_100003804
305 Ga0070663_100024477
306 Ga0070685_10013744
307 Ga0070679_100022068
308 Ga0068853_100010102
309 Ga0070686_100000015
310 Ga0070665_100000400
311 Ga0070665_100012058
312 Ga0070665_100075813
313 Ga0068855_100063400
314 Ga0068857_100000445
315 Ga0068854_100013089
316 Ga0068854_100026021
317 Ga0068859_100003681
318 Ga0068851_10008535
319 Ga0068865_100015543
320 Ga0097620_100003681
321 Ga0105240_10016397
322 Ga0105240_10092355
323 Ga0105247_10017334
324 Ga0105247_10048328
325 Ga0105248_10012251
326 Ga0105237_10001063
327 Ga0105237_10001798
328 Ga0105238_10008534
329 Ga0105238_10211680
330 Ga0105239_10002290
331 Ga0105239_10038685
332 Ga0157314_1000038
333 Ga0157370_10068946
334 Ga0157370_10102698
335 Ga0157369_10001164
336 Ga0163162_10063999
337 Ga0157372_10076530
338 Ga0182006_1000062
339 Ga0182005_1000035
340 Ga0183369_1007
341 Ga0183368_1002
342 Ga0209566_103331
343 Ga0209674_100077
344 Ga0209674_100222
345 Ga0209672_100004
346 Ga0209672_100022
347 Ga0209672_100355
348 Ga0209672_100943
349 Ga0209563_100103
350 Ga0209437_100076
351 Ga0209258_100003
352 Ga0209258_100004
353 Ga0209258_100606
354 Ga0209258_101560
355 Ga0209646_1003552
356 Ga0209026_1000155
357 Ga0209026_1000668
358 Ga0209677_102154
359 Ga0209148_1000002
360 Ga0209148_1000025
361 Ga0209148_1000083
362 Ga0209148_1000668
363 Ga0209759_1001156
364 Ga0209455_1000004
365 Ga0209455_1000084
366 Ga0209455_1000095
367 Ga0209455_1002893
368 Ga0209758_1005918
369 Ga0209051_1010701
370 Ga0207656_10003152
371 Ga0207680_10000001
372 Ga0207647_10000191
373 Ga0207695_10001097
374 Ga0207695_10003710
375 Ga0207671_10000057
376 Ga0207671_10001085
377 Ga0207649_10017372
378 Ga0207652_10018247
379 Ga0207694_10000283
380 Ga0207650_10037058
381 Ga0207690_10001379
382 Ga0207667_10000851
383 Ga0207667_10027479
384 Ga0207640_10002215
385 Ga0207639_10006697
386 Ga0207678_10002645
387 Ga0207678_10006639
388 Ga0207702_10004258
389 Ga0207641_10050461
390 Ga0268266_10000001
391 Ga0268266_10000059
392 Ga0268265_10000196
393 Ga0268264_10066170
394 Ga0307510_10000254
395 Ga0395899_0000110
396 Ga0395900_0000012
397 Ga0395900_0023675
398 Ga0395898_0000237
399 Ga0395898_0004261
400 Ga0395901_0000161
401 Ga0395901_0182837
402 Ga0466969_0002609
403 Ga0466969_0003679
404 Ga0466982_0000057
405 Ga0466961_0004203
406 Ga0466961_0007107
407 Ga0466971_0002010
408 Ga0466971_0008316
409 Ga0466968_0001537
410 Ga0466970_0000034
411 Ga0466970_0002862
412 Ga0466970_0017702
413 Ga0466957_0019997
414 Ga0466959_0000091
415 Ga0466959_0001655
416 Ga0466959_0024003
417 Ga0466959_0084314
418 Ga0466958_0016786
419 Ga0466958_0038027
420 Ga0495617_000035
421 Ga0495617_000456
422 Ga0495638_0000019
423 Ga0495638_0000059
424 Ga0495638_0000288
425 Ga0495638_0000619
426 Ga0495638_0045040
427 Ga0495650_0000206
428 Ga0495650_0001006
429 Ga0495650_0002043
430 Ga0495584_0001286
431 Ga0495585_0000131
432 Ga0495585_0001877
433 Ga0495607_0034793
434 Ga0495606_0000299
435 Ga0495606_0001067
436 Ga0495606_0001786
437 Ga0495606_0065703
438 Ga0495616_0000027
439 Ga0495620_0000643
440 Ga0495620_0020387
441 Ga0495631_0000079
442 Ga0495631_0000249
443 Ga0495632_0000019
444 Ga0495632_0017362
445 Ga0495632_0035678
446 Ga0495648_0001174
447 Ga0495648_0002200
448 Ga0495609_0009949
449 Ga0495668_0057760
450 Ga0495668_0101163
451 Ga0495611_0000001
452 Ga0495611_0000027
453 Ga0495625_0000037
454 Ga0495625_0045924
455 Ga0495625_0122235
456 Ga0495661_0008428
457 Ga0495670_0000760
458 Ga0495670_0001336
459 Ga0495671_0004626
460 Ga0495649_0013040
461 Ga0495589_0000051
462 Ga0495660_0000324
463 Ga0495660_0000329
464 Ga0495679_000001
465 Ga0495673_0000010
466 Ga0495673_0000072
467 Ga0495686_0000189
468 Ga0495686_0001411
469 Ga0496106_0000484
470 Ga0496106_0042002
471 Ga0496113_0038682
472 Ga0496115_0000175
473 Ga0496115_0000383
474 Ga0496117_0003980
475 Ga0496118_0000953
476 Ga0496118_0002604
477 Ga0496118_0003759
478 Ga0496121_0000493
479 Ga0496121_0001210
480 Ga0496121_0002713
481 Ga0496122_0029864
482 Ga0496123_0004778
483 Ga0496123_0032291
484 Ga0496124_0008813
485 Ga0496125_0003336
486 Ga0496125_0025314
487 Ga0496126_0018196
488 Ga0496126_0045151
489 Ga0496126_0172068
490 Ga0495678_000028
491 Ga0495682_0001444
492 Ga0495682_0035995
493 Ga0501031_0001173
494 Ga0501032_0001856
495 Ga0501032_0020963
496 Ga0501033_0010213
497 Ga0501034_0005105
498 Ga0501034_0062787
499 Ga0501037_0017131
500 Ga0501037_0033736
501 Ga0501038_0002196
502 Ga0501039_0048203
503 Ga0501039_0137815
504 Ga0501043_0014327
505 Ga0501043_0041584
506 Ga0501043_0149280
507 Ga0501046_0040278
508 Ga0501046_0056463
509 Ga0501047_0016869
510 Ga0501047_0019509
511 Ga0501048_0030485
512 Ga0501070_0014723
513 Ga0501070_0024622
514 Ga0501073_0010646
515 Ga0501073_0120427
516 Ga0501080_0006056
517 Ga0501083_0043197
518 Ga0501035_0003959
519 Ga0501044_0005362
520 Ga0501044_0040680
521 Ga0501044_0146845
522 nmdc:mga0sz30_5481_c1
523 Ga0500610_0000528
524 Ga0500643_000053
525 Ga0500651_0001296
526 Ga0500651_0002079
527 Ga0500568_0000426
528 Ga0500645_001966
529 Ga0500661_008518
530 Ga0501082_0007909
531 2538833435
532 2595448180
533 2595451458
534 2643829490
535 2643895249
536 2644477421
537 2687584079
538 2721028500
539 2735835911
540 2739229186
541 2739732170
542 2819563283
543 2842915114
544 2842921479
545 2884339712
546 2884413693
547 2904464408
548 2919088939
549 2919404538
550 2928964857
551 2941472585
552 2953997467

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

277

436

0.94

PF18158

AidB_N

Adaptive response protein AidB N-terminal domain

10

161

0.89

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

168

268

0.88

PF22217

ACDH-11_C

Acyl-CoA dehydrogenase 11 C-terminal domain-like

442

521

0.86

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

295

425

0.84

PF22924

ACOX_C_alpha1

Acyl-CoA oxidase, C-alpha1 domain

287

436

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4y9j-assembly1.cif.gz_B crystal structure of caenorhabditis elegans acdh-11 in complex with c11-coa 0.9345 2 535
6sd8-assembly1.cif.gz_X bd2924 apo-form 0.9176 3 504
4y9j-assembly1.cif.gz_B crystal structure of caenorhabditis elegans acdh-11 in complex with c11-coa 0.9162 2 535
6sd8-assembly1.cif.gz_X bd2924 apo-form 0.9106 3 504
5ez3-assembly1.cif.gz_A crystal structure acyl-coa dehydrogenase from brucella melitensis in complex with fad 0.8593 6 543
ID Description Score Start End Superfamily
af_Q9XWZ2_321_475_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9508 277 428 1.20.140.10
af_I6X9J0_277_441_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9402 272 433 1.20.140.10
af_Q9XWZ2_321_475_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9271 277 428 1.20.140.10
af_P9WQG1_243_389_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9204 285 434 1.20.140.10
af_Q55BV1_307_473_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9197 277 432 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A522KQ92-F1-model_v4 Acyl-CoA dehydrogenase 0.9733 265 543 GO:0003995
AF-A0A522KQ92-F1-model_v4 Acyl-CoA dehydrogenase 0.9631 265 543 GO:0003995
AF-A0A197JIG1-F1-model_v4 Acyl-CoA dehydrogenase/oxidase C-terminal 0.9546 60 443 GO:0003995
AF-A0A1F3TT78-F1-model_v4 Acyl-CoA dehydrogenase 0.9488 3 534 GO:0003995
AF-A0A7W1RIU3-F1-model_v4 deleted 0.9433 1 318

Map