F380968

General Info

Members Datasets Scaffolds Average Seq Length
276 156 552 508

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100109553|Ga0070706_1001095531
Length 568
Sequence MYQVIARKYRPQSFSDVVNQEHVKTTLQNAIAQNRIAHGYIFSGQRGTGKTTVARILARCLNCVKGPTDQPCGVCSSCIEIAAGNAVDVIEIDAASNRGINEMRELRENVRYQPARDRYKIFIVDEAHQITSEAFNALLKTIEEPPAWVIFVLCTTEAHKIPATIASRCQHFSFRSVDFEEVVARMDWICHQEGIEADAEVLAVLAQAGEGSVRDSLSALDQAIACCGAKLDAVEVRALLGAFSLDALEQVTQALTDSNSGRMLEVVDQLERNGHNLQHFSRELARYFRNILVAKISGKDTRLIAASPRERERLERIAASFSEEDLTRYLQLSLELFTDLQASLQPRFHLEIGLVRMVQAGRMTSIEEALAGLESGRAGEGAKGRGAEMRDGGTGRTGDAEKPAPRPQPPVASVPSSAPKRPSPFELDRMKKAGSREPQSVGATALMGQIHWRERLHAALIELNMPFTADAIQHSEIRENGAELHFTTPPQFGLSMNAGDLTKAIREVTERQFKIKITVGEVAAVENPAAAPQAVHAEVEQQALANPEVKRFLEVFGGEVRTVRNLKE

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
56 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
89 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
90 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
117 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 0.72
Rhizosphere 89.49
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100109553 3300005467 Bacteria 2570
2 Ga0070658_10002919 3300005327 Bacteria 14175
3 Ga0070683_100000003 3300005329 Bacteria 375084
4 Ga0070683_100010411 3300005329 Bacteria 7998
5 Ga0070683_100172954 3300005329 Bacteria 2050
6 Ga0068869_100097812 3300005334 Bacteria 2216
7 Ga0070666_10010286 3300005335 Bacteria 5848
8 Ga0070680_100003728 3300005336 Bacteria 11380
9 Ga0068868_100034862 3300005338 Bacteria 3887
10 Ga0070660_100015095 3300005339 Bacteria 5574
11 Ga0070660_100170184 3300005339 Bacteria 1759
12 Ga0070659_100013719 3300005366 Bacteria 6040
13 Ga0070714_100002821 3300005435 Bacteria 12818
14 Ga0070711_100008771 3300005439 Bacteria 6205
15 Ga0070663_100031840 3300005455 Bacteria 3628
16 Ga0070681_10068644 3300005458 Bacteria 3511
17 Ga0070681_10092682 3300005458 Bacteria 2969
18 Ga0070681_10208575 3300005458 Bacteria 1870
19 Ga0070679_100093521 3300005530 Bacteria 2994
20 Ga0070684_100000014 3300005535 Bacteria 158815
21 Ga0070684_100074862 3300005535 Bacteria 2985
22 Ga0070697_100036952 3300005536 Bacteria 3945
23 Ga0068853_100077469 3300005539 Bacteria 2904
24 Ga0070696_100011381 3300005546 Bacteria 5959
25 Ga0068855_100006924 3300005563 Bacteria 13751
26 Ga0068855_100018469 3300005563 Bacteria 8380
27 Ga0068855_100023314 3300005563 Bacteria 7413
28 Ga0068855_100156336 3300005563 Bacteria 2590
29 Ga0068855_100193791 3300005563 Bacteria 2290
30 Ga0068855_100223141 3300005563 Bacteria 2112
31 Ga0068855_100236407 3300005563 Bacteria 2043
32 Ga0070664_100111271 3300005564 Bacteria 2390
33 Ga0068857_100077256 3300005577 Bacteria 2970
34 Ga0068856_100001755 3300005614 Bacteria 22674
35 Ga0068856_100022608 3300005614 Bacteria 6113
36 Ga0068856_100122998 3300005614 Bacteria 2597
37 Ga0068856_100270709 3300005614 Bacteria 1714
38 Ga0068859_100111352 3300005617 Bacteria 2800
39 Ga0068863_100047600 3300005841 Bacteria 4067
40 Ga0068858_100021987 3300005842 Bacteria 5957
41 Ga0068858_100060382 3300005842 Bacteria 3504
42 Ga0068858_100143926 3300005842 Bacteria 2238
43 Ga0068858_100261174 3300005842 Bacteria 1646
44 Ga0068860_100020682 3300005843 Bacteria 6375
45 Ga0081455_10074976 3300005937 Bacteria 2792
46 Ga0070717_10002642 3300006028 Bacteria 12624
47 Ga0070717_10047285 3300006028 Bacteria 3524
48 Ga0097621_100004895 3300006237 Bacteria 9389
49 Ga0097621_100033233 3300006237 Bacteria 4106
50 Ga0097621_100128103 3300006237 Bacteria 2157
51 Ga0068871_100015366 3300006358 Bacteria 5727
52 Ga0068871_100125799 3300006358 Bacteria 2169
53 Ga0075431_100001305 3300006847 Bacteria 22799
54 Ga0075431_100032058 3300006847 Bacteria 5415
55 Ga0075436_100001903 3300006914 Bacteria 14332
56 Ga0097620_100111353 3300006931 Bacteria 2800
57 Ga0105240_10002132 3300009093 Bacteria 32323
58 Ga0105240_10005509 3300009093 Bacteria 18864
59 Ga0105240_10005577 3300009093 Bacteria 18707
60 Ga0105240_10006740 3300009093 Bacteria 16817
61 Ga0105240_10162186 3300009093 Bacteria 2654
62 Ga0105245_10032993 3300009098 Bacteria 4585
63 Ga0105245_10040128 3300009098 Bacteria 4168
64 Ga0105245_10071716 3300009098 Bacteria 3146
65 Ga0105245_10102948 3300009098 Bacteria 2644
66 Ga0105241_10056037 3300009174 Bacteria 3021
67 Ga0105242_10105231 3300009176 Bacteria 2396
68 Ga0105242_10172096 3300009176 Bacteria 1904
69 Ga0105242_10203158 3300009176 Bacteria 1761
70 Ga0105248_10010342 3300009177 Bacteria 10269
71 Ga0105248_10238128 3300009177 Bacteria 2049
72 Ga0105237_10001641 3300009545 Bacteria 29041
73 Ga0105237_10134278 3300009545 Bacteria 2469
74 Ga0105238_10029359 3300009551 Bacteria 5602
75 Ga0105238_10036778 3300009551 Bacteria 4978
76 Ga0105238_10105210 3300009551 Bacteria 2803
77 Ga0105249_10004805 3300009553 Bacteria 11662
78 Ga0105239_10035735 3300010375 Bacteria 5455
79 Ga0105239_10051805 3300010375 Bacteria 4499
80 Ga0105246_10028169 3300011119 Bacteria 3688
81 Ga0157373_10055773 3300013100 Bacteria 2807
82 Ga0157370_10055350 3300013104 Bacteria 3779
83 Ga0157370_10074252 3300013104 Bacteria 3208
84 Ga0157370_10146922 3300013104 Bacteria 2195
85 Ga0157369_10002412 3300013105 Bacteria 22451
86 Ga0157369_10010268 3300013105 Bacteria 10683
87 Ga0157369_10012948 3300013105 Bacteria 9451
88 Ga0157369_10079538 3300013105 Bacteria 3511
89 Ga0157369_10088804 3300013105 Bacteria 3300
90 Ga0157374_10018232 3300013296 Bacteria 6193
91 Ga0157378_10064912 3300013297 Bacteria 3266
92 Ga0157378_10097910 3300013297 Bacteria 2674
93 Ga0163162_10051884 3300013306 Bacteria 4117
94 Ga0157372_10220961 3300013307 Bacteria 2196
95 Ga0157375_10005487 3300013308 Bacteria 11027
96 Ga0157375_10126797 3300013308 Bacteria 2668
97 Ga0163163_10005820 3300014325 Bacteria 10715
98 Ga0163163_10072250 3300014325 Bacteria 3439
99 Ga0157379_10095505 3300014968 Bacteria 2667
100 Ga0157376_10015634 3300014969 Bacteria 5739
101 Ga0213873_10000623 3300021358 Bacteria 5783
102 Ga0213872_10000138 3300021361 Bacteria 65490
103 Ga0213876_10001745 3300021384 Bacteria 13192
104 Ga0213876_10014931 3300021384 Bacteria 4117
105 Ga0213876_10028140 3300021384 Bacteria 2964
106 Ga0213875_10000006 3300021388 Bacteria 579005
107 Ga0213875_10000032 3300021388 Bacteria 172918
108 Ga0213875_10002100 3300021388 Bacteria 12220
109 Ga0213875_10003231 3300021388 Bacteria 9357
110 Ga0213875_10008656 3300021388 Bacteria 5197
111 Ga0213875_10015687 3300021388 Bacteria 3685
112 Ga0213871_10002042 3300021441 Bacteria 3614
113 Ga0207680_10090116 3300025903 Bacteria 1948
114 Ga0207695_10007356 3300025913 Bacteria 14049
115 Ga0207695_10009657 3300025913 Bacteria 11894
116 Ga0207695_10014863 3300025913 Bacteria 9191
117 Ga0207695_10019753 3300025913 Bacteria 7745
118 Ga0207695_10021385 3300025913 Bacteria 7382
119 Ga0207695_10022372 3300025913 Bacteria 7177
120 Ga0207671_10083836 3300025914 Bacteria 2393
121 Ga0207671_10108536 3300025914 Bacteria 2109
122 Ga0207671_10136563 3300025914 Bacteria 1886
123 Ga0207663_10116776 3300025916 Bacteria 1820
124 Ga0207660_10022296 3300025917 Bacteria 4266
125 Ga0207657_10060268 3300025919 Bacteria 3257
126 Ga0207652_10107711 3300025921 Bacteria 2468
127 Ga0207652_10145779 3300025921 Bacteria 2119
128 Ga0207694_10018153 3300025924 Bacteria 5318
129 Ga0207694_10042568 3300025924 Bacteria 3503
130 Ga0207694_10072797 3300025924 Bacteria 2687
131 Ga0207694_10081328 3300025924 Bacteria 2544
132 Ga0207687_10015808 3300025927 Bacteria 4954
133 Ga0207687_10020395 3300025927 Bacteria 4396
134 Ga0207700_10070960 3300025928 Bacteria 2680
135 Ga0207700_10091179 3300025928 Bacteria 2407
136 Ga0207664_10001784 3300025929 Bacteria 14178
137 Ga0207644_10117610 3300025931 Bacteria 2019
138 Ga0207690_10024516 3300025932 Bacteria 3779
139 Ga0207706_10046642 3300025933 Bacteria 3837
140 Ga0207711_10005538 3300025941 Bacteria 10677
141 Ga0207661_10000014 3300025944 Bacteria 322246
142 Ga0207661_10009339 3300025944 Bacteria 7029
143 Ga0207661_10036162 3300025944 Bacteria 3853
144 Ga0207667_10010408 3300025949 Bacteria 10874
145 Ga0207667_10020795 3300025949 Bacteria 7288
146 Ga0207667_10024452 3300025949 Bacteria 6632
147 Ga0207667_10028766 3300025949 Bacteria 6033
148 Ga0207667_10120834 3300025949 Bacteria 2700
149 Ga0207712_10008564 3300025961 Bacteria 6467
150 Ga0207677_10009808 3300026023 Bacteria 5396
151 Ga0207703_10011093 3300026035 Bacteria 7019
152 Ga0207703_10033391 3300026035 Bacteria 4079
153 Ga0207702_10012972 3300026078 Bacteria 6932
154 Ga0207702_10028665 3300026078 Bacteria 4628
155 Ga0207648_10019178 3300026089 Bacteria 6172
156 Ga0207676_10009235 3300026095 Bacteria 7016
157 Ga0207674_10037681 3300026116 Bacteria 5025
158 Ga0207683_10065343 3300026121 Bacteria 3207
159 Ga0207698_10128747 3300026142 Bacteria 2159
160 Ga0268266_10012734 3300028379 Bacteria 7268
161 Ga0265338_10038888 3300028800 Bacteria 4499
162 Ga0265338_10060548 3300028800 Bacteria 3325
163 Ga0265328_10005577 3300031239 Bacteria 5382
164 Ga0265320_10000699 3300031240 Bacteria 25600
165 Ga0265340_10005654 3300031247 Bacteria 6915
166 Ga0265331_10001349 3300031250 Bacteria 18084
167 Ga0265331_10043508 3300031250 Bacteria 2175
168 Ga0265316_10000612 3300031344 Bacteria 39686
169 Ga0265316_10001254 3300031344 Bacteria 27274
170 Ga0265316_10011374 3300031344 Bacteria 8031
171 Ga0265316_10089437 3300031344 Bacteria 2350
172 Ga0265313_10002499 3300031595 Bacteria 15834
173 Ga0265314_10000833 3300031711 Bacteria 36549
174 Ga0265314_10010494 3300031711 Bacteria 7723
175 Ga0265314_10016159 3300031711 Bacteria 5909
176 Ga0265314_10017264 3300031711 Bacteria 5670
177 Ga0265342_10007866 3300031712 Bacteria 7739
178 Ga0265342_10079102 3300031712 Bacteria 1902
179 Ga0373953_0009734 3300035117 Bacteria 3320
180 Ga0373953_0039380 3300035117 Bacteria 1873
181 Ga0373954_0000765 3300035118 Bacteria 12406
182 Ga0373954_0024512 3300035118 Bacteria 2751
183 Ga0373946_0036215 3300035171 Bacteria 2000
184 Ga0373955_0093134 3300035172 Bacteria 1720
185 Ga0373927_0001960 3300035695 Bacteria 15201
186 Ga0373927_0003515 3300035695 Bacteria 11212
187 Ga0373927_0005750 3300035695 Bacteria 8517
188 Ga0373933_0008604 3300035724 Bacteria 5566
189 Ga0373947_0000974 3300035725 Bacteria 17486
190 Ga0373947_0017787 3300035725 Bacteria 4089
191 Ga0373937_0002349 3300036401 Bacteria 15773
192 Ga0373937_0008033 3300036401 Bacteria 9149
193 Ga0373937_0024860 3300036401 Bacteria 5406
194 Ga0373937_0247724 3300036401 Bacteria 1679
195 Ga0373925_0001356 3300037068 Bacteria 21339
196 Ga0373925_0032235 3300037068 Bacteria 3856
197 Ga0373925_0120418 3300037068 Bacteria 2037
198 Ga0373925_0138151 3300037068 Bacteria 1906
199 Ga0395900_0126967 3300037418 Bacteria 2616
200 Ga0436364_0229975 3300037853 Bacteria 5848
201 Ga0436364_0403604 3300037853 Bacteria 63400
202 Ga0436364_0468316 3300037853 Bacteria 11922
203 Ga0436364_0478514 3300037853 Bacteria 578677
204 Ga0436364_0599273 3300037853 Bacteria 2915
205 Ga0436364_0870750 3300037853 Bacteria 4065
206 Ga0436364_1061626 3300037853 Bacteria 2407
207 Ga0436364_1105375 3300037853 Bacteria 139847
208 Ga0436364_1298431 3300037853 Bacteria 5096
209 Ga0436364_1548942 3300037853 Bacteria 22734
210 Ga0436365_0202626 3300039437 Bacteria 36993
211 Ga0436365_0719903 3300039437 Bacteria 7620
212 Ga0436365_1617620 3300039437 Bacteria 4713
213 Ga0436365_1729618 3300039437 Bacteria 5017
214 Ga0436360_0477583 3300039438 Bacteria 47726
215 Ga0436361_1089336 3300039447 Bacteria 150546
216 Ga0436363_0246336 3300039450 Bacteria 8811
217 Ga0436363_0908016 3300039450 Bacteria 2470
218 Ga0436363_1588665 3300039450 Bacteria 6417
219 Ga0436362_0085458 3300039453 Bacteria 1836
220 Ga0436362_0195703 3300039453 Bacteria 4763
221 Ga0436362_1208510 3300039453 Bacteria 9192
222 Ga0466966_0068852 3300044684 Unclassified 2221
223 Ga0495651_0065415 3300046462 Bacteria 2777
224 Ga0495580_0000423 3300046472 Bacteria 35086
225 Ga0495580_0041470 3300046472 Bacteria 3283
226 Ga0495582_0007282 3300046473 Bacteria 6131
227 Ga0495665_0057498 3300046531 Bacteria 2053
228 Ga0495634_0036413 3300046642 Bacteria 3366
229 Ga0495623_0085331 3300046679 Bacteria 1947
230 Ga0495658_0073017 3300046683 Bacteria 1996
231 Ga0495669_0017104 3300046684 Bacteria 3109
232 Ga0495613_0047792 3300046689 Bacteria 3161
233 Ga0495604_0029258 3300047317 Bacteria 4382
234 Ga0495674_0013233 3300047319 Bacteria 7757
235 Ga0495674_0072156 3300047319 Bacteria 2978
236 Ga0495684_0001750 3300047471 Bacteria 17435
237 Ga0495684_0003985 3300047471 Bacteria 11517
238 Ga0495684_0035337 3300047471 Bacteria 3833
239 Ga0496102_0165573 3300048905 Bacteria 2080
240 Ga0496112_0011140 3300048915 Bacteria 8199
241 Ga0501033_0024564 3300049570 Bacteria 4547
242 Ga0501034_0012244 3300049571 Bacteria 8864
243 Ga0501034_0078250 3300049571 Bacteria 3312
244 Ga0501036_0001161 3300049572 Bacteria 20016
245 Ga0501037_0002899 3300049573 Bacteria 12439
246 Ga0501038_0003330 3300049574 Bacteria 14988
247 Ga0501039_0004802 3300049575 Bacteria 10235
248 Ga0501042_0055270 3300049578 Bacteria 2833
249 Ga0501043_0002231 3300049579 Bacteria 16502
250 Ga0501046_0003849 3300049580 Bacteria 13735
251 Ga0501047_0066124 3300049581 Bacteria 3485
252 Ga0501048_0006421 3300049582 Bacteria 8935
253 Ga0501068_0006777 3300049584 Bacteria 6330
254 Ga0501069_0009002 3300049585 Bacteria 5268
255 Ga0501070_0050421 3300049586 Bacteria 3456
256 Ga0501072_0000504 3300049588 Bacteria 28106
257 Ga0501073_0000638 3300049589 Bacteria 24591
258 Ga0501074_0001339 3300049590 Bacteria 16344
259 Ga0501076_0120182 3300049592 Bacteria 2127
260 Ga0501077_0007535 3300049593 Bacteria 6713
261 Ga0501079_0008663 3300049741 Bacteria 7714
262 Ga0501080_0095782 3300049742 Bacteria 2756
263 Ga0501035_0022462 3300049822 Bacteria 5794
264 Ga0501035_0121583 3300049822 Bacteria 2282
265 Ga0501044_0002342 3300049823 Bacteria 21610
266 Ga0501044_0020698 3300049823 Bacteria 7022
267 Ga0501044_0031527 3300049823 Bacteria 5579
268 nmdc:mga0qj67_51726_c1 3300050509 Bacteria 3249
269 nmdc:mga06r32_19126_c1 3300050510 Bacteria 6284
270 nmdc:mga06r32_26665_c1 3300050510 Bacteria 5390
271 nmdc:mga08x19_3318_c1 3300050514 Bacteria 9623
272 Ga0495601_0025954 3300053077 Bacteria 3615
273 Ga0500568_0000591 3300053139 Bacteria 26375
274 Ga0501084_0006155 3300054114 Bacteria 9866
275 Ga0501082_0001403 3300060353 Bacteria 21228
276 Ga0501082_0008481 3300060353 Bacteria 8861
277 Ga0070706_100109553
278 Ga0070658_10002919
279 Ga0070683_100000003
280 Ga0070683_100010411
281 Ga0070683_100172954
282 Ga0068869_100097812
283 Ga0070666_10010286
284 Ga0070680_100003728
285 Ga0068868_100034862
286 Ga0070660_100015095
287 Ga0070660_100170184
288 Ga0070659_100013719
289 Ga0070714_100002821
290 Ga0070711_100008771
291 Ga0070663_100031840
292 Ga0070681_10068644
293 Ga0070681_10092682
294 Ga0070681_10208575
295 Ga0070679_100093521
296 Ga0070684_100000014
297 Ga0070684_100074862
298 Ga0070697_100036952
299 Ga0068853_100077469
300 Ga0070696_100011381
301 Ga0068855_100006924
302 Ga0068855_100018469
303 Ga0068855_100023314
304 Ga0068855_100156336
305 Ga0068855_100193791
306 Ga0068855_100223141
307 Ga0068855_100236407
308 Ga0070664_100111271
309 Ga0068857_100077256
310 Ga0068856_100001755
311 Ga0068856_100022608
312 Ga0068856_100122998
313 Ga0068856_100270709
314 Ga0068859_100111352
315 Ga0068863_100047600
316 Ga0068858_100021987
317 Ga0068858_100060382
318 Ga0068858_100143926
319 Ga0068858_100261174
320 Ga0068860_100020682
321 Ga0081455_10074976
322 Ga0070717_10002642
323 Ga0070717_10047285
324 Ga0097621_100004895
325 Ga0097621_100033233
326 Ga0097621_100128103
327 Ga0068871_100015366
328 Ga0068871_100125799
329 Ga0075431_100001305
330 Ga0075431_100032058
331 Ga0075436_100001903
332 Ga0097620_100111353
333 Ga0105240_10002132
334 Ga0105240_10005509
335 Ga0105240_10005577
336 Ga0105240_10006740
337 Ga0105240_10162186
338 Ga0105245_10032993
339 Ga0105245_10040128
340 Ga0105245_10071716
341 Ga0105245_10102948
342 Ga0105241_10056037
343 Ga0105242_10105231
344 Ga0105242_10172096
345 Ga0105242_10203158
346 Ga0105248_10010342
347 Ga0105248_10238128
348 Ga0105237_10001641
349 Ga0105237_10134278
350 Ga0105238_10029359
351 Ga0105238_10036778
352 Ga0105238_10105210
353 Ga0105249_10004805
354 Ga0105239_10035735
355 Ga0105239_10051805
356 Ga0105246_10028169
357 Ga0157373_10055773
358 Ga0157370_10055350
359 Ga0157370_10074252
360 Ga0157370_10146922
361 Ga0157369_10002412
362 Ga0157369_10010268
363 Ga0157369_10012948
364 Ga0157369_10079538
365 Ga0157369_10088804
366 Ga0157374_10018232
367 Ga0157378_10064912
368 Ga0157378_10097910
369 Ga0163162_10051884
370 Ga0157372_10220961
371 Ga0157375_10005487
372 Ga0157375_10126797
373 Ga0163163_10005820
374 Ga0163163_10072250
375 Ga0157379_10095505
376 Ga0157376_10015634
377 Ga0213873_10000623
378 Ga0213872_10000138
379 Ga0213876_10001745
380 Ga0213876_10014931
381 Ga0213876_10028140
382 Ga0213875_10000006
383 Ga0213875_10000032
384 Ga0213875_10002100
385 Ga0213875_10003231
386 Ga0213875_10008656
387 Ga0213875_10015687
388 Ga0213871_10002042
389 Ga0207680_10090116
390 Ga0207695_10007356
391 Ga0207695_10009657
392 Ga0207695_10014863
393 Ga0207695_10019753
394 Ga0207695_10021385
395 Ga0207695_10022372
396 Ga0207671_10083836
397 Ga0207671_10108536
398 Ga0207671_10136563
399 Ga0207663_10116776
400 Ga0207660_10022296
401 Ga0207657_10060268
402 Ga0207652_10107711
403 Ga0207652_10145779
404 Ga0207694_10018153
405 Ga0207694_10042568
406 Ga0207694_10072797
407 Ga0207694_10081328
408 Ga0207687_10015808
409 Ga0207687_10020395
410 Ga0207700_10070960
411 Ga0207700_10091179
412 Ga0207664_10001784
413 Ga0207644_10117610
414 Ga0207690_10024516
415 Ga0207706_10046642
416 Ga0207711_10005538
417 Ga0207661_10000014
418 Ga0207661_10009339
419 Ga0207661_10036162
420 Ga0207667_10010408
421 Ga0207667_10020795
422 Ga0207667_10024452
423 Ga0207667_10028766
424 Ga0207667_10120834
425 Ga0207712_10008564
426 Ga0207677_10009808
427 Ga0207703_10011093
428 Ga0207703_10033391
429 Ga0207702_10012972
430 Ga0207702_10028665
431 Ga0207648_10019178
432 Ga0207676_10009235
433 Ga0207674_10037681
434 Ga0207683_10065343
435 Ga0207698_10128747
436 Ga0268266_10012734
437 Ga0265338_10038888
438 Ga0265338_10060548
439 Ga0265328_10005577
440 Ga0265320_10000699
441 Ga0265340_10005654
442 Ga0265331_10001349
443 Ga0265331_10043508
444 Ga0265316_10000612
445 Ga0265316_10001254
446 Ga0265316_10011374
447 Ga0265316_10089437
448 Ga0265313_10002499
449 Ga0265314_10000833
450 Ga0265314_10010494
451 Ga0265314_10016159
452 Ga0265314_10017264
453 Ga0265342_10007866
454 Ga0265342_10079102
455 Ga0373953_0009734
456 Ga0373953_0039380
457 Ga0373954_0000765
458 Ga0373954_0024512
459 Ga0373946_0036215
460 Ga0373955_0093134
461 Ga0373927_0001960
462 Ga0373927_0003515
463 Ga0373927_0005750
464 Ga0373933_0008604
465 Ga0373947_0000974
466 Ga0373947_0017787
467 Ga0373937_0002349
468 Ga0373937_0008033
469 Ga0373937_0024860
470 Ga0373937_0247724
471 Ga0373925_0001356
472 Ga0373925_0032235
473 Ga0373925_0120418
474 Ga0373925_0138151
475 Ga0395900_0126967
476 Ga0436364_0229975
477 Ga0436364_0403604
478 Ga0436364_0468316
479 Ga0436364_0478514
480 Ga0436364_0599273
481 Ga0436364_0870750
482 Ga0436364_1061626
483 Ga0436364_1105375
484 Ga0436364_1298431
485 Ga0436364_1548942
486 Ga0436365_0202626
487 Ga0436365_0719903
488 Ga0436365_1617620
489 Ga0436365_1729618
490 Ga0436360_0477583
491 Ga0436361_1089336
492 Ga0436363_0246336
493 Ga0436363_0908016
494 Ga0436363_1588665
495 Ga0436362_0085458
496 Ga0436362_0195703
497 Ga0436362_1208510
498 Ga0466966_0068852
499 Ga0495651_0065415
500 Ga0495580_0000423
501 Ga0495580_0041470
502 Ga0495582_0007282
503 Ga0495665_0057498
504 Ga0495634_0036413
505 Ga0495623_0085331
506 Ga0495658_0073017
507 Ga0495669_0017104
508 Ga0495613_0047792
509 Ga0495604_0029258
510 Ga0495674_0013233
511 Ga0495674_0072156
512 Ga0495684_0001750
513 Ga0495684_0003985
514 Ga0495684_0035337
515 Ga0496102_0165573
516 Ga0496112_0011140
517 Ga0501033_0024564
518 Ga0501034_0012244
519 Ga0501034_0078250
520 Ga0501036_0001161
521 Ga0501037_0002899
522 Ga0501038_0003330
523 Ga0501039_0004802
524 Ga0501042_0055270
525 Ga0501043_0002231
526 Ga0501046_0003849
527 Ga0501047_0066124
528 Ga0501048_0006421
529 Ga0501068_0006777
530 Ga0501069_0009002
531 Ga0501070_0050421
532 Ga0501072_0000504
533 Ga0501073_0000638
534 Ga0501074_0001339
535 Ga0501076_0120182
536 Ga0501077_0007535
537 Ga0501079_0008663
538 Ga0501080_0095782
539 Ga0501035_0022462
540 Ga0501035_0121583
541 Ga0501044_0002342
542 Ga0501044_0020698
543 Ga0501044_0031527
544 nmdc:mga0qj67_51726_c1
545 nmdc:mga06r32_19126_c1
546 nmdc:mga06r32_26665_c1
547 nmdc:mga08x19_3318_c1
548 Ga0495601_0025954
549 Ga0500568_0000591
550 Ga0501084_0006155
551 Ga0501082_0001403
552 Ga0501082_0008481

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

19

178

0.97

PF12169

DNA_pol3_gamma3

DNA polymerase III subunits gamma and tau domain III

231

373

0.96

PF22608

DNAX_ATPase_lid

DNA polymerase III clamp loader subunit, ATPase lid domain

181

229

0.94

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

40

177

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.9538 4 241
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.9461 4 241
6vvo-assembly1.cif.gz_C structure of the human clamp loader (replication factor c, rfc) bound to the sliding clamp (proliferating cell nuclear antigen, pcna) 0.8508 6 359
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.8463 6 242
2chq-assembly1.cif.gz_A replication factor c adpnp complex 0.8445 8 361
ID Description Score Start End Superfamily
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9473 4 177 3.40.50.300
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.942 4 177 3.40.50.300
1njfB02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9413 177 240 1.10.8.60
1njfD02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9411 177 241 1.10.8.60
af_P9WNT9_180_242_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9407 181 241 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A534E2D4-F1-model_v4 deleted 0.9799 6 194
AF-A0A7X2MT47-F1-model_v4 DNA polymerase III subunit gamma/tau (EC 2.7.7.7) 0.9709 29 214 GO:0003887
GO:0005524
GO:0006261
GO:0009360
GO:0016887
GO:0046872
AF-A0A3C1SIS5-F1-model_v4 DNA polymerase III subunit gamma/tau (EC 2.7.7.7) 0.9667 1 188 GO:0003887
GO:0005524
GO:0006261
GO:0009360
GO:0016887
AF-X1CYH6-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9621 1 199 GO:0003887
GO:0005524
GO:0006261
GO:0009360
GO:0016887
AF-X1IH18-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9604 2 228 GO:0003887
GO:0005524
GO:0006261
GO:0009360
GO:0016887
GO:0046872

Map