F380787

General Info

Members Datasets Scaffolds Average Seq Length
275 171 550 341

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2671180195|2671835287
Length 406
Sequence GTVISPVAPPSRATATRPYGQLHVSTHTIKIQFLPSRGLGDSHARRQVPQQAPEEARFPMKNRFRAVAALALVASLAISACGGGDDDEAGSGGGSGSSTTLHIVGFAVPEAANKAIATEWNKTEAGKGVKFETSYGASGDQSRAVVSGLKADYVHFSVASDVTRLVDAGLVADTWDDGPTKGIVSSSVVVLAVRKGNPKNIKGWDDLIKPGIGIVTPNPASSGSARWNALAAWGHISANGGTDAQAEEYLTKLFANVVSLPSSGRDATTAFLGGTGDVLLAYENEAILARQSGEELDWVVPDTTILIENPGAVLTKADPKAKEWYDFVLSPEGQRQFALKGFRPVIDGVKVDEVEGALDPKNPFPTPKKLLTVKDDFESWSALSKKFFAEDTGIVVKVIAASGKAK

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300012491 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610 Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
74 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
75 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
76 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
77 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
78 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
87 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
88 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
89 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
90 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
124 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
139 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
140 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
141 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
142 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
143 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
144 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
147 2671180195 Frankia sp. CcI49 Isolate Nodule
148 2643221561 Nocardioides sp. Root151 Isolate Unclassified
149 2643221576 Nocardioides sp. Root614 Isolate Unclassified
150 2643221590 Nocardioides sp. Root682 Isolate Unclassified
151 2643221604 Nocardioides sp. Root190 Isolate Unclassified
152 2643221615 Nocardioides sp. Root224 Isolate Unclassified
153 2643221617 Nocardioides sp. Root79 Isolate Unclassified
154 2643221620 Nocardioides sp. Root240 Isolate Unclassified
155 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
156 2643221696 Nocardioides sp. Root140 Isolate Unclassified
157 2738541305 Nocardioides sp. CF167 Isolate Unclassified
158 2739367898 Nocardioides sp. CF479 Isolate Unclassified
159 2773857922 Frankia sp. CcI49 Isolate Nodule
160 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
161 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
162 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
163 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
164 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
165 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
166 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
167 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
168 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
169 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
170 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
171 8002775197 Frankia nepalensis CN7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.18
Metatranscriptomes 0.73
Isolates 9.09

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 16.73
Nodule 1.09
Rhizoplane 1.45
Rhizosphere 73.45
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10007854 3300003203 Bacteria 4853
2 Ga0006562J51391_1047248 3300003578 Bacteria 2960
3 JGI25405J52794_10004918 3300003911 Bacteria 2395
4 Ga0070682_100018287 3300005337 Bacteria 4095
5 Ga0070660_100056190 3300005339 Bacteria 3045
6 Ga0070675_100039987 3300005354 Bacteria 3828
7 Ga0070674_100104941 3300005356 Bacteria 2066
8 Ga0070700_100026584 3300005441 Bacteria 3420
9 Ga0070700_100044792 3300005441 Bacteria 2727
10 Ga0070662_100049431 3300005457 Bacteria 3033
11 Ga0070662_100211080 3300005457 Bacteria 1545
12 Ga0068867_100235988 3300005459 Bacteria 1481
13 Ga0068857_100453621 3300005577 Bacteria 1199
14 Ga0081455_10000386 3300005937 Bacteria 58274
15 Ga0081455_10015163 3300005937 Bacteria 7500
16 Ga0081455_10055917 3300005937 Bacteria 3353
17 Ga0081539_10000085 3300005985 Bacteria 217816
18 Ga0081539_10016078 3300005985 Bacteria 5379
19 Ga0075365_10054072 3300006038 Bacteria 2661
20 Ga0075365_10075326 3300006038 Bacteria 2277
21 Ga0075365_10106669 3300006038 Bacteria 1922
22 Ga0075368_10002546 3300006042 Bacteria 5967
23 Ga0075368_10009965 3300006042 Bacteria 3428
24 Ga0075363_100007094 3300006048 Bacteria 5126
25 Ga0075363_100018686 3300006048 Bacteria 3457
26 Ga0075363_100019322 3300006048 Bacteria 3405
27 Ga0075364_10004842 3300006051 Bacteria 7799
28 Ga0075364_10009553 3300006051 Bacteria 5823
29 Ga0075364_10079978 3300006051 Bacteria 2160
30 Ga0075364_10175173 3300006051 Bacteria 1450
31 Ga0075364_10209633 3300006051 Bacteria 1321
32 Ga0075432_10003444 3300006058 Bacteria 5353
33 Ga0075362_10038931 3300006177 Bacteria 2089
34 Ga0075367_10000633 3300006178 Bacteria 13469
35 Ga0075367_10010789 3300006178 Bacteria 4812
36 Ga0075367_10014383 3300006178 Bacteria 4284
37 Ga0075367_10065979 3300006178 Bacteria 2168
38 Ga0075367_10146569 3300006178 Bacteria 1464
39 Ga0075370_10004069 3300006353 Bacteria 7035
40 Ga0075370_10015471 3300006353 Bacteria 4085
41 Ga0075370_10044366 3300006353 Bacteria 2514
42 Ga0075370_10069228 3300006353 Bacteria 2016
43 Ga0075428_100027956 3300006844 Bacteria 6240
44 Ga0075428_100059742 3300006844 Bacteria 4175
45 Ga0075428_100573506 3300006844 Unclassified 1206
46 Ga0075431_100134710 3300006847 Bacteria 2547
47 Ga0075433_10037610 3300006852 Bacteria 4176
48 Ga0075433_10064273 3300006852 Bacteria 3216
49 Ga0075434_100049424 3300006871 Bacteria 4176
50 Ga0075429_100118223 3300006880 Bacteria 2317
51 Ga0075429_100199970 3300006880 Bacteria 1751
52 Ga0068865_100015783 3300006881 Bacteria 4819
53 Ga0068865_100210177 3300006881 Bacteria 1516
54 Ga0075436_100009555 3300006914 Bacteria 6638
55 Ga0075435_100009517 3300007076 Bacteria 7042
56 Ga0075435_100377881 3300007076 Bacteria 1217
57 Ga0111539_10082167 3300009094 Bacteria 3789
58 Ga0111539_10097860 3300009094 Bacteria 3447
59 Ga0105245_10253769 3300009098 Bacteria 1710
60 Ga0114129_10023486 3300009147 Bacteria 8742
61 Ga0105243_10015077 3300009148 Bacteria 5849
62 Ga0105239_10059585 3300010375 Bacteria 4190
63 Ga0105239_10189145 3300010375 Bacteria 2304
64 Ga0157329_1000775 3300012491 Bacteria 1411
65 Ga0157371_10125811 3300013102 Bacteria 1823
66 Ga0163162_10084539 3300013306 Bacteria 3249
67 Ga0157372_10010486 3300013307 Bacteria 9864
68 Ga0157372_10346964 3300013307 Bacteria 1729
69 Ga0157380_10151317 3300014326 Bacteria 2006
70 Ga0157380_10304905 3300014326 Bacteria 1469
71 Ga0163161_10113787 3300017792 Bacteria 2026
72 Ga0207688_10147247 3300025901 Bacteria 1389
73 Ga0207657_10139291 3300025919 Bacteria 1983
74 Ga0207649_10040393 3300025920 Bacteria 2835
75 Ga0207659_10002829 3300025926 Bacteria 10357
76 Ga0207706_10023240 3300025933 Bacteria 5568
77 Ga0207686_10053332 3300025934 Bacteria 2527
78 Ga0207709_10266208 3300025935 Bacteria 1259
79 Ga0207669_10093649 3300025937 Bacteria 1964
80 Ga0207704_10034828 3300025938 Bacteria 2877
81 Ga0207712_10042021 3300025961 Bacteria 3146
82 Ga0207668_10339310 3300025972 Bacteria 1253
83 Ga0207678_10381206 3300026067 Bacteria 1219
84 Ga0207708_10030355 3300026075 Bacteria 4098
85 Ga0207708_10033405 3300026075 Bacteria 3909
86 Ga0207648_10068321 3300026089 Bacteria 3096
87 Ga0207675_100064903 3300026118 Bacteria 3413
88 Ga0207675_100285474 3300026118 Bacteria 1604
89 Ga0209813_10013989 3300027866 Bacteria 2153
90 Ga0209813_10027173 3300027866 Bacteria 1660
91 Ga0207428_10005992 3300027907 Bacteria 11255
92 Ga0207428_10010437 3300027907 Bacteria 8297
93 Ga0307408_100005601 3300031548 Bacteria 8398
94 Ga0307405_10017324 3300031731 Bacteria 3950
95 Ga0307405_10076149 3300031731 Bacteria 2176
96 Ga0307413_10000286 3300031824 Bacteria 15568
97 Ga0307413_10104377 3300031824 Bacteria 1881
98 Ga0307410_10030831 3300031852 Bacteria 3431
99 Ga0307410_10140606 3300031852 Bacteria 1785
100 Ga0307406_10001794 3300031901 Bacteria 11725
101 Ga0307406_10060850 3300031901 Bacteria 2436
102 Ga0307407_10000470 3300031903 Bacteria 12376
103 Ga0307407_10014909 3300031903 Bacteria 3821
104 Ga0307412_10004591 3300031911 Bacteria 7701
105 Ga0307412_10084267 3300031911 Bacteria 2206
106 Ga0307412_10102268 3300031911 Bacteria 2028
107 Ga0307409_100003470 3300031995 Bacteria 8567
108 Ga0307409_100042738 3300031995 Bacteria 3396
109 Ga0307409_100049989 3300031995 Bacteria 3190
110 Ga0307409_100061985 3300031995 Bacteria 2926
111 Ga0307409_100190112 3300031995 Bacteria 1827
112 Ga0307416_100011198 3300032002 Bacteria 5961
113 Ga0307416_100103227 3300032002 Bacteria 2488
114 Ga0307416_100180354 3300032002 Bacteria 1978
115 Ga0307416_100249093 3300032002 Bacteria 1727
116 Ga0307414_10000435 3300032004 Bacteria 22140
117 Ga0307414_10047602 3300032004 Bacteria 2952
118 Ga0307411_10002436 3300032005 Bacteria 8230
119 Ga0307411_10063531 3300032005 Bacteria 2467
120 Ga0307415_100001368 3300032126 Bacteria 11615
121 Ga0307415_100004415 3300032126 Bacteria 7293
122 Ga0307415_100174341 3300032126 Bacteria 1680
123 Ga0373939_0054925 3300035114 Bacteria 1249
124 Ga0395900_0019324 3300037418 Bacteria 6950
125 Ga0395898_0125964 3300037466 Bacteria 2454
126 Ga0439442_024939 3300042002 Bacteria 1244
127 Ga0439432_019597 3300042006 Bacteria 2253
128 Ga0439450_002820 3300042008 Bacteria 2791
129 Ga0439463_001689 3300042016 Bacteria 5780
130 Ga0439434_0037843 3300042435 Bacteria 1478
131 Ga0439464_0025972 3300042439 Bacteria 1623
132 Ga0439464_0041321 3300042439 Bacteria 1315
133 Ga0466961_0032553 3300044693 Bacteria 3351
134 Ga0466970_0024234 3300044765 Bacteria 3172
135 Ga0466958_0153431 3300045836 Bacteria 1453
136 Ga0495664_0093240 3300046477 Bacteria 1812
137 Ga0495596_0057426 3300046500 Bacteria 1519
138 Ga0495606_0008568 3300046507 Bacteria 8849
139 Ga0495620_0013100 3300046515 Bacteria 4256
140 Ga0495644_0040210 3300046523 Bacteria 1763
141 Ga0495656_0022565 3300046615 Bacteria 2466
142 Ga0495625_0004403 3300046660 Bacteria 13347
143 Ga0495626_0000309 3300048091 Bacteria 51750
144 Ga0496108_0006642 3300048911 Bacteria 9369
145 Ga0496109_0003052 3300048912 Bacteria 13956
146 Ga0496114_0066610 3300048917 Bacteria 3020
147 Ga0496114_0242792 3300048917 Bacteria 1584
148 Ga0501317_004477 3300049533 Bacteria 1455
149 Ga0501031_0000063 3300049568 Bacteria 57266
150 Ga0501032_0000427 3300049569 Bacteria 34916
151 Ga0501032_0009416 3300049569 Bacteria 7078
152 Ga0501033_0000817 3300049570 Bacteria 28434
153 Ga0501033_0001543 3300049570 Bacteria 20356
154 Ga0501034_0002905 3300049571 Bacteria 19916
155 Ga0501034_0072998 3300049571 Bacteria 3440
156 Ga0501034_0098764 3300049571 Bacteria 2915
157 Ga0501036_0000408 3300049572 Bacteria 30363
158 Ga0501036_0083501 3300049572 Bacteria 2700
159 Ga0501037_0000259 3300049573 Bacteria 45657
160 Ga0501037_0005619 3300049573 Bacteria 9141
161 Ga0501037_0184705 3300049573 Bacteria 1478
162 Ga0501038_0000146 3300049574 Bacteria 60336
163 Ga0501038_0018479 3300049574 Bacteria 6294
164 Ga0501038_0024231 3300049574 Bacteria 5414
165 Ga0501038_0102183 3300049574 Bacteria 2386
166 Ga0501039_0000075 3300049575 Bacteria 74491
167 Ga0501039_0070812 3300049575 Bacteria 2709
168 Ga0501040_0005921 3300049576 Bacteria 7918
169 Ga0501040_0020947 3300049576 Bacteria 4360
170 Ga0501040_0122749 3300049576 Bacteria 1823
171 Ga0501041_0042479 3300049577 Bacteria 2763
172 Ga0501042_0033131 3300049578 Bacteria 3662
173 Ga0501043_0000882 3300049579 Bacteria 26619
174 Ga0501043_0024922 3300049579 Bacteria 4693
175 Ga0501043_0130753 3300049579 Bacteria 1967
176 Ga0501046_0000324 3300049580 Bacteria 47936
177 Ga0501046_0002531 3300049580 Bacteria 17096
178 Ga0501046_0007128 3300049580 Bacteria 9834
179 Ga0501047_0020202 3300049581 Bacteria 6394
180 Ga0501047_0142267 3300049581 Bacteria 2276
181 Ga0501048_0001493 3300049582 Bacteria 17753
182 Ga0501048_0003831 3300049582 Bacteria 11473
183 Ga0501048_0018157 3300049582 Bacteria 5174
184 Ga0501067_0015395 3300049583 Bacteria 4234
185 Ga0501067_0019367 3300049583 Bacteria 3766
186 Ga0501069_0000137 3300049585 Bacteria 32103
187 Ga0501069_0053380 3300049585 Bacteria 2251
188 Ga0501069_0072287 3300049585 Bacteria 1934
189 Ga0501070_0001107 3300049586 Bacteria 24195
190 Ga0501070_0017553 3300049586 Bacteria 6007
191 Ga0501071_0007486 3300049587 Bacteria 7175
192 Ga0501071_0052312 3300049587 Bacteria 2945
193 Ga0501071_0327346 3300049587 Bacteria 1164
194 Ga0501073_0119008 3300049589 Bacteria 1831
195 Ga0501074_0000301 3300049590 Bacteria 28455
196 Ga0501074_0007633 3300049590 Bacteria 7828
197 Ga0501074_0137316 3300049590 Bacteria 1749
198 Ga0501074_0261736 3300049590 Bacteria 1230
199 Ga0501075_0123249 3300049591 Bacteria 1973
200 Ga0501076_0026827 3300049592 Bacteria 4465
201 Ga0501080_0000531 3300049742 Bacteria 29982
202 Ga0501080_0138379 3300049742 Bacteria 2252
203 Ga0501080_0149494 3300049742 Bacteria 2159
204 Ga0501080_0151796 3300049742 Bacteria 2141
205 Ga0501081_0012418 3300049743 Bacteria 5597
206 Ga0501083_0056529 3300049744 Bacteria 2629
207 Ga0501083_0070641 3300049744 Bacteria 2322
208 Ga0501035_0000822 3300049822 Bacteria 33112
209 Ga0501035_0049610 3300049822 Bacteria 3761
210 Ga0501035_0168573 3300049822 Bacteria 1892
211 Ga0501044_0005767 3300049823 Bacteria 13702
212 Ga0501044_0025629 3300049823 Bacteria 6251
213 Ga0501044_0106150 3300049823 Bacteria 2821
214 Ga0501045_0009985 3300049824 Bacteria 6639
215 Ga0501045_0266991 3300049824 Bacteria 1274
216 Ga0501045_0323943 3300049824 Bacteria 1147
217 nmdc:mga03683_10744_c1 3300050489 Bacteria 3290
218 nmdc:mga03n38_9283_c1 3300050490 Bacteria 3570
219 nmdc:mga00v17_10654_c1 3300050491 Bacteria 5028
220 nmdc:mga00v17_34248_c1 3300050491 Bacteria 3015
221 nmdc:mga0yw44_10003_c1 3300050492 Bacteria 4824
222 nmdc:mga0yw44_11041_c1 3300050492 Bacteria 4640
223 nmdc:mga0yw44_123488_c1 3300050492 Bacteria 1670
224 nmdc:mga0yw44_3667_c1 3300050492 Bacteria 6867
225 nmdc:mga0yw44_52267_c1 3300050492 Bacteria 2476
226 nmdc:mga0yw44_73608_c1 3300050492 Bacteria 2126
227 nmdc:mga06z11_10891_c1 3300050494 Bacteria 3895
228 nmdc:mga06z11_1943_c1 3300050494 Bacteria 7794
229 nmdc:mga04h51_10733_c1 3300050495 Bacteria 2524
230 nmdc:mga07m45_69804_c1 3300050496 Bacteria 1998
231 nmdc:mga05p37_192152_c1 3300050507 Bacteria 2477
232 nmdc:mga0qj67_269926_c1 3300050509 Bacteria 1379
233 nmdc:mga06r32_89221_c1 3300050510 Bacteria 3010
234 nmdc:mga08y16_29293_c1 3300050511 Bacteria 5801
235 nmdc:mga08y16_69313_c1 3300050511 Bacteria 3677
236 nmdc:mga0n895_7931_c1 3300050512 Bacteria 9156
237 nmdc:mga0rr50_18703_c1 3300050513 Bacteria 4660
238 nmdc:mga0rr50_43466_c1 3300050513 Bacteria 3289
239 nmdc:mga08x19_9398_c1 3300050514 Bacteria 5854
240 nmdc:mga0a205_20326_c1 3300050515 Bacteria 6263
241 nmdc:mga0a205_4610_c1 3300050515 Bacteria 12358
242 nmdc:mga0sz30_20197_c1 3300050516 Bacteria 2685
243 Ga0500644_0000617 3300053088 Bacteria 13341
244 Ga0500641_0098853 3300053096 Bacteria 1250
245 Ga0500556_0002086 3300053104 Bacteria 6866
246 Ga0500593_006624 3300053117 Bacteria 4645
247 Ga0500568_0080743 3300053139 Bacteria 1235
248 Ga0500616_0005628 3300053153 Bacteria 8456
249 Ga0501084_0051195 3300054114 Bacteria 3456
250 Ga0530510_0034313 3300061734 Bacteria 3654
251 2671835287 2671180195 Bacteria 9757215
252 2643827328 2643221561 Bacteria 4984412
253 2643891827 2643221576 Bacteria 5214352
254 2643960879 2643221590 Bacteria 5214697
255 2644032029 2643221604 Bacteria 5014917
256 2644093083 2643221615 Bacteria 5487866
257 2644100437 2643221617 Bacteria 5139111
258 2644116845 2643221620 Bacteria 5134593
259 2644322694 2643221657 Bacteria 5490246
260 2644533845 2643221696 Bacteria 5431823
261 2738871220 2738541305 Bacteria 4910150
262 2740168254 2739367898 Bacteria 4367674
263 2774853443 2773857922 Bacteria 9757215
264 2812334829 2811994874 Bacteria 5367947
265 2831936777 2831935698 Bacteria 5963223
266 2832005130 2832004796 Bacteria 6538017
267 2837275836 2837268691 Bacteria 7850704
268 2855388143 2855386786 Bacteria 4752232
269 2857484619 2857481737 Bacteria 4761446
270 2866068569 2866065130 Bacteria 6518152
271 2867507159 2867507094 Bacteria 6506033
272 2883826657 2883821847 Bacteria 5121194
273 2887480442 2887478801 Bacteria 8972725
274 2984593968 2984592036 Bacteria 3670284
275 8002781387 8002775197 Bacteria 10728764
276 JGI25406J46586_10007854
277 Ga0006562J51391_1047248
278 JGI25405J52794_10004918
279 Ga0070682_100018287
280 Ga0070660_100056190
281 Ga0070675_100039987
282 Ga0070674_100104941
283 Ga0070700_100026584
284 Ga0070700_100044792
285 Ga0070662_100049431
286 Ga0070662_100211080
287 Ga0068867_100235988
288 Ga0068857_100453621
289 Ga0081455_10000386
290 Ga0081455_10015163
291 Ga0081455_10055917
292 Ga0081539_10000085
293 Ga0081539_10016078
294 Ga0075365_10054072
295 Ga0075365_10075326
296 Ga0075365_10106669
297 Ga0075368_10002546
298 Ga0075368_10009965
299 Ga0075363_100007094
300 Ga0075363_100018686
301 Ga0075363_100019322
302 Ga0075364_10004842
303 Ga0075364_10009553
304 Ga0075364_10079978
305 Ga0075364_10175173
306 Ga0075364_10209633
307 Ga0075432_10003444
308 Ga0075362_10038931
309 Ga0075367_10000633
310 Ga0075367_10010789
311 Ga0075367_10014383
312 Ga0075367_10065979
313 Ga0075367_10146569
314 Ga0075370_10004069
315 Ga0075370_10015471
316 Ga0075370_10044366
317 Ga0075370_10069228
318 Ga0075428_100027956
319 Ga0075428_100059742
320 Ga0075428_100573506
321 Ga0075431_100134710
322 Ga0075433_10037610
323 Ga0075433_10064273
324 Ga0075434_100049424
325 Ga0075429_100118223
326 Ga0075429_100199970
327 Ga0068865_100015783
328 Ga0068865_100210177
329 Ga0075436_100009555
330 Ga0075435_100009517
331 Ga0075435_100377881
332 Ga0111539_10082167
333 Ga0111539_10097860
334 Ga0105245_10253769
335 Ga0114129_10023486
336 Ga0105243_10015077
337 Ga0105239_10059585
338 Ga0105239_10189145
339 Ga0157329_1000775
340 Ga0157371_10125811
341 Ga0163162_10084539
342 Ga0157372_10010486
343 Ga0157372_10346964
344 Ga0157380_10151317
345 Ga0157380_10304905
346 Ga0163161_10113787
347 Ga0207688_10147247
348 Ga0207657_10139291
349 Ga0207649_10040393
350 Ga0207659_10002829
351 Ga0207706_10023240
352 Ga0207686_10053332
353 Ga0207709_10266208
354 Ga0207669_10093649
355 Ga0207704_10034828
356 Ga0207712_10042021
357 Ga0207668_10339310
358 Ga0207678_10381206
359 Ga0207708_10030355
360 Ga0207708_10033405
361 Ga0207648_10068321
362 Ga0207675_100064903
363 Ga0207675_100285474
364 Ga0209813_10013989
365 Ga0209813_10027173
366 Ga0207428_10005992
367 Ga0207428_10010437
368 Ga0307408_100005601
369 Ga0307405_10017324
370 Ga0307405_10076149
371 Ga0307413_10000286
372 Ga0307413_10104377
373 Ga0307410_10030831
374 Ga0307410_10140606
375 Ga0307406_10001794
376 Ga0307406_10060850
377 Ga0307407_10000470
378 Ga0307407_10014909
379 Ga0307412_10004591
380 Ga0307412_10084267
381 Ga0307412_10102268
382 Ga0307409_100003470
383 Ga0307409_100042738
384 Ga0307409_100049989
385 Ga0307409_100061985
386 Ga0307409_100190112
387 Ga0307416_100011198
388 Ga0307416_100103227
389 Ga0307416_100180354
390 Ga0307416_100249093
391 Ga0307414_10000435
392 Ga0307414_10047602
393 Ga0307411_10002436
394 Ga0307411_10063531
395 Ga0307415_100001368
396 Ga0307415_100004415
397 Ga0307415_100174341
398 Ga0373939_0054925
399 Ga0395900_0019324
400 Ga0395898_0125964
401 Ga0439442_024939
402 Ga0439432_019597
403 Ga0439450_002820
404 Ga0439463_001689
405 Ga0439434_0037843
406 Ga0439464_0025972
407 Ga0439464_0041321
408 Ga0466961_0032553
409 Ga0466970_0024234
410 Ga0466958_0153431
411 Ga0495664_0093240
412 Ga0495596_0057426
413 Ga0495606_0008568
414 Ga0495620_0013100
415 Ga0495644_0040210
416 Ga0495656_0022565
417 Ga0495625_0004403
418 Ga0495626_0000309
419 Ga0496108_0006642
420 Ga0496109_0003052
421 Ga0496114_0066610
422 Ga0496114_0242792
423 Ga0501317_004477
424 Ga0501031_0000063
425 Ga0501032_0000427
426 Ga0501032_0009416
427 Ga0501033_0000817
428 Ga0501033_0001543
429 Ga0501034_0002905
430 Ga0501034_0072998
431 Ga0501034_0098764
432 Ga0501036_0000408
433 Ga0501036_0083501
434 Ga0501037_0000259
435 Ga0501037_0005619
436 Ga0501037_0184705
437 Ga0501038_0000146
438 Ga0501038_0018479
439 Ga0501038_0024231
440 Ga0501038_0102183
441 Ga0501039_0000075
442 Ga0501039_0070812
443 Ga0501040_0005921
444 Ga0501040_0020947
445 Ga0501040_0122749
446 Ga0501041_0042479
447 Ga0501042_0033131
448 Ga0501043_0000882
449 Ga0501043_0024922
450 Ga0501043_0130753
451 Ga0501046_0000324
452 Ga0501046_0002531
453 Ga0501046_0007128
454 Ga0501047_0020202
455 Ga0501047_0142267
456 Ga0501048_0001493
457 Ga0501048_0003831
458 Ga0501048_0018157
459 Ga0501067_0015395
460 Ga0501067_0019367
461 Ga0501069_0000137
462 Ga0501069_0053380
463 Ga0501069_0072287
464 Ga0501070_0001107
465 Ga0501070_0017553
466 Ga0501071_0007486
467 Ga0501071_0052312
468 Ga0501071_0327346
469 Ga0501073_0119008
470 Ga0501074_0000301
471 Ga0501074_0007633
472 Ga0501074_0137316
473 Ga0501074_0261736
474 Ga0501075_0123249
475 Ga0501076_0026827
476 Ga0501080_0000531
477 Ga0501080_0138379
478 Ga0501080_0149494
479 Ga0501080_0151796
480 Ga0501081_0012418
481 Ga0501083_0056529
482 Ga0501083_0070641
483 Ga0501035_0000822
484 Ga0501035_0049610
485 Ga0501035_0168573
486 Ga0501044_0005767
487 Ga0501044_0025629
488 Ga0501044_0106150
489 Ga0501045_0009985
490 Ga0501045_0266991
491 Ga0501045_0323943
492 nmdc:mga03683_10744_c1
493 nmdc:mga03n38_9283_c1
494 nmdc:mga00v17_10654_c1
495 nmdc:mga00v17_34248_c1
496 nmdc:mga0yw44_10003_c1
497 nmdc:mga0yw44_11041_c1
498 nmdc:mga0yw44_123488_c1
499 nmdc:mga0yw44_3667_c1
500 nmdc:mga0yw44_52267_c1
501 nmdc:mga0yw44_73608_c1
502 nmdc:mga06z11_10891_c1
503 nmdc:mga06z11_1943_c1
504 nmdc:mga04h51_10733_c1
505 nmdc:mga07m45_69804_c1
506 nmdc:mga05p37_192152_c1
507 nmdc:mga0qj67_269926_c1
508 nmdc:mga06r32_89221_c1
509 nmdc:mga08y16_29293_c1
510 nmdc:mga08y16_69313_c1
511 nmdc:mga0n895_7931_c1
512 nmdc:mga0rr50_18703_c1
513 nmdc:mga0rr50_43466_c1
514 nmdc:mga08x19_9398_c1
515 nmdc:mga0a205_20326_c1
516 nmdc:mga0a205_4610_c1
517 nmdc:mga0sz30_20197_c1
518 Ga0500644_0000617
519 Ga0500641_0098853
520 Ga0500556_0002086
521 Ga0500593_006624
522 Ga0500568_0080743
523 Ga0500616_0005628
524 Ga0501084_0051195
525 Ga0530510_0034313
526 2671835287
527 2643827328
528 2643891827
529 2643960879
530 2644032029
531 2644093083
532 2644100437
533 2644116845
534 2644322694
535 2644533845
536 2738871220
537 2740168254
538 2774853443
539 2812334829
540 2831936777
541 2832005130
542 2837275836
543 2855388143
544 2857484619
545 2866068569
546 2867507159
547 2883826657
548 2887480442
549 2984593968
550 8002781387

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13531

SBP_bac_11

Bacterial extracellular solute-binding protein

101

343

0.89

PF13343

SBP_bac_6

Bacterial extracellular solute-binding protein

161

372

0.78

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

107

335

0.77

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

115

363

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ddn-assembly2.cif.gz_B the sulfate-binding protein subi from mycobacterium tuberculosis h37rv 0.9274 18 307
6ddn-assembly2.cif.gz_B the sulfate-binding protein subi from mycobacterium tuberculosis h37rv 0.9212 18 307
5um2-assembly1.cif.gz_A functional and structural characterization of a sulfate-binding protein (sbp) from xanthomonas citri 0.8835 17 318
1sbp-assembly1.cif.gz_A 1.7 angstroms refined structure of sulfate-binding protein involved in active transport and novel mode of sulfate binding 0.872 17 317
1sbp-assembly1.cif.gz_A 1.7 angstroms refined structure of sulfate-binding protein involved in active transport and novel mode of sulfate binding 0.8481 17 317
ID Description Score Start End Superfamily
4rxlA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9536 20 93 3.40.190.10
6ddnB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9371 106 307 3.40.190.10
6ddnB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9309 106 307 3.40.190.10
af_P16700_16_293_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9219 17 263 3.40.50.1100
af_P71744_144_341_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9123 106 307 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A538EU80-F1-model_v4 Sulfate ABC transporter substrate-binding protein 0.9867 17 85 GO:0042597
GO:1902358
AF-K6W9W5-F1-model_v4 Sulfate ABC transporter substrate-binding protein 0.9846 18 100 GO:0016020
GO:0042597
GO:1902358
AF-A0A0S4QRD1-F1-model_v4 Sulfate transport system substrate-binding protein 0.9752 17 324 GO:0042597
GO:1902358
AF-A0A653M3J9-F1-model_v4 Sulfate-binding protein 0.9737 17 322 GO:0042597
GO:1902358
AF-A0A520EC34-F1-model_v4 Extracellular solute-binding protein 0.9727 102 324 GO:0042597
GO:1902358

Map