F380646

General Info

Members Datasets Scaffolds Average Seq Length
275 214 550 391

Family's Representative Sequence

Representative Sequence 3300046522|Ga0495643_0006604|Ga0495643_0006604_726_2021
Length 431
Sequence MDQCLAQMPAAAAVCITERREIRLPMNLGVELSMSAIHASNALRHFRVLDLSRVRAGPTCVRMLADFGADVIRIEPPAGIDPNETMFAGNRSGGDFQNLNRNKRSLTLNLKKPAGLEVFKRLAQHADVVVENWRPDVKARLGLDYESLRAINPRIILASISGYGQEGPYAWRPGFDQVIQGMSGLMSVTGLPGQGPVRAGLAVADSSSGLYAAIGILIALLERERSGQGQWVQASLLHSLIAMLDFQVARYLTEGDIPEQAGNDHPTSSPMGLFEAADGLFNLGASGEGNWVRLCKAIAKPEWIGAEAYIDEKARRRNRAQLSQSLNEVFRARPVAYWVTLLNEAGVPAGPLYTIPDMCQDPHVLHQKMTEKVTTAEGATVGLVTQPVRLDRTPASIVATAPGWGQHTDEVMAEAGYGPDEIAELKRQGVV

Samples

Sample ID Description Type Environment
1 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
94 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
95 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
114 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
133 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
146 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
147 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
148 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
164 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
176 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
182 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
183 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
184 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
187 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
192 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
193 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
194 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
195 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
196 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
197 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
198 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
199 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
200 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
201 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
202 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
203 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
204 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
205 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
206 2855730933 Achromobacter sp. HZ28 Isolate Nodule
207 2855767633 Achromobacter sp. HZ34 Isolate Nodule
208 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
209 2858950400 Achromobacter sp. K91 Isolate Unclassified
210 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
211 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
212 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
213 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
214 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96
Metatranscriptomes 0.36
Isolates 3.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.82
Nodule 0.73
Rhizoplane 5.45
Rhizosphere 77.09
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495643_0006604 3300046522 Bacteria 7620
2 JGI25151J46595_10000096 3300003187 Bacteria 118213
3 Ga0055540_1002805 3300003792 Bacteria 8915
4 Ga0070676_10011534 3300005328 Bacteria 4806
5 Ga0070670_100050385 3300005331 Bacteria 3578
6 Ga0070689_100017327 3300005340 Bacteria 5288
7 Ga0070668_100010883 3300005347 Bacteria 6769
8 Ga0070668_100220162 3300005347 Bacteria 1565
9 Ga0070669_100027155 3300005353 Bacteria 4120
10 Ga0070675_100029424 3300005354 Bacteria 4430
11 Ga0070674_100027493 3300005356 Bacteria 3728
12 Ga0070667_100084956 3300005367 Bacteria 2714
13 Ga0070694_100016459 3300005444 Bacteria 4654
14 Ga0070678_100024864 3300005456 Bacteria 4017
15 Ga0070678_100102312 3300005456 Bacteria 2223
16 Ga0070698_100040283 3300005471 Bacteria 4802
17 Ga0070672_100044235 3300005543 Bacteria 3437
18 Ga0070704_100058648 3300005549 Bacteria 2743
19 Ga0068852_100017476 3300005616 Bacteria 5629
20 Ga0068859_100015682 3300005617 Bacteria 7614
21 Ga0068859_100060420 3300005617 Bacteria 3819
22 Ga0068864_100145337 3300005618 Bacteria 2143
23 Ga0068858_100005548 3300005842 Bacteria 12347
24 Ga0068860_100003672 3300005843 Bacteria 15792
25 Ga0068860_100010035 3300005843 Bacteria 9388
26 Ga0068862_100002231 3300005844 Bacteria 17370
27 Ga0081540_1046816 3300005983 Bacteria 2180
28 Ga0075368_10008159 3300006042 Bacteria 3720
29 Ga0075363_100009177 3300006048 Bacteria 4644
30 Ga0075364_10055654 3300006051 Bacteria 2588
31 Ga0070715_10111555 3300006163 Bacteria 1291
32 Ga0075362_10008233 3300006177 Bacteria 3980
33 Ga0075366_10051688 3300006195 Bacteria 2442
34 Ga0097621_100066707 3300006237 Bacteria 2965
35 Ga0075370_10036510 3300006353 Bacteria 2760
36 Ga0075428_100257963 3300006844 Bacteria 1878
37 Ga0075431_100009851 3300006847 Bacteria 9593
38 Ga0075431_100031729 3300006847 Bacteria 5442
39 Ga0075434_100094130 3300006871 Bacteria 3000
40 Ga0075429_100000768 3300006880 Bacteria 25287
41 Ga0075436_100079296 3300006914 Bacteria 2274
42 Ga0097620_100015684 3300006931 Bacteria 7614
43 Ga0097620_100060420 3300006931 Bacteria 3819
44 Ga0105240_10009713 3300009093 Bacteria 13584
45 Ga0114129_10011834 3300009147 Bacteria 12410
46 Ga0114129_10017278 3300009147 Bacteria 10275
47 Ga0105243_10000807 3300009148 Bacteria 29842
48 Ga0105241_10034071 3300009174 Bacteria 3825
49 Ga0105237_10423847 3300009545 Bacteria 1336
50 Ga0157378_10061850 3300013297 Bacteria 3343
51 Ga0163162_10252538 3300013306 Bacteria 1895
52 Ga0163163_10022642 3300014325 Bacteria 5954
53 Ga0157380_10064298 3300014326 Bacteria 2944
54 Ga0157379_10003457 3300014968 Bacteria 13366
55 Ga0157376_10087436 3300014969 Bacteria 2690
56 Ga0163161_10017378 3300017792 Bacteria 5033
57 Ga0224712_10013312 3300022467 Bacteria 2615
58 Ga0228598_1003225 3300024227 Bacteria 3516
59 Ga0209676_1000071 3300025292 Bacteria 309464
60 Ga0209025_1000003 3300025294 Bacteria 1366495
61 Ga0209025_1000038 3300025294 Bacteria 380508
62 Ga0209051_1000261 3300025303 Bacteria 87969
63 Ga0209257_1012876 3300025304 Bacteria 3793
64 Ga0207685_10076965 3300025905 Bacteria 1369
65 Ga0207645_10021993 3300025907 Bacteria 4153
66 Ga0207654_10007127 3300025911 Bacteria 5631
67 Ga0207695_10140471 3300025913 Bacteria 2364
68 Ga0207681_10019431 3300025923 Bacteria 4293
69 Ga0207650_10001629 3300025925 Bacteria 15988
70 Ga0207650_10014074 3300025925 Bacteria 5555
71 Ga0207659_10122225 3300025926 Bacteria 1996
72 Ga0207687_10000556 3300025927 Bacteria 25111
73 Ga0207644_10054865 3300025931 Bacteria 2871
74 Ga0207670_10018117 3300025936 Bacteria 4272
75 Ga0207669_10006890 3300025937 Bacteria 5227
76 Ga0207691_10081740 3300025940 Unclassified 2903
77 Ga0207711_10055260 3300025941 Bacteria 3409
78 Ga0207679_10114596 3300025945 Bacteria 2134
79 Ga0207668_10007525 3300025972 Bacteria 6481
80 Ga0207677_10258570 3300026023 Bacteria 1418
81 Ga0207703_10298528 3300026035 Bacteria 1468
82 Ga0207648_10299083 3300026089 Bacteria 1443
83 Ga0207676_10025769 3300026095 Bacteria 4366
84 Ga0207675_100016177 3300026118 Bacteria 6967
85 Ga0207683_10036532 3300026121 Bacteria 4279
86 Ga0207683_10168102 3300026121 Bacteria 1985
87 Ga0207698_10011759 3300026142 Bacteria 5690
88 Ga0209371_1000342 3300027312 Bacteria 50937
89 Ga0209588_1012456 3300027671 Bacteria 2583
90 Ga0268265_10002330 3300028380 Bacteria 14421
91 Ga0268264_10001080 3300028381 Bacteria 26978
92 Ga0268264_10011271 3300028381 Bacteria 7387
93 Ga0265337_1008237 3300028556 Bacteria 3810
94 Ga0307515_10093888 3300028794 Bacteria 3713
95 Ga0268256_1000291 3300030500 Bacteria 50937
96 Ga0307511_10000014 3300030521 Bacteria 127602
97 Ga0307513_10062525 3300031456 Bacteria 3934
98 Ga0307412_10004758 3300031911 Bacteria 7581
99 Ga0307412_10007553 3300031911 Bacteria 6174
100 Ga0307411_10040229 3300032005 Bacteria 2964
101 Ga0307507_10027937 3300033179 Bacteria 6029
102 Ga0373923_0008810 3300035111 Bacteria 3617
103 Ga0373932_0029397 3300035112 Bacteria 1517
104 Ga0373954_0011431 3300035118 Bacteria 3934
105 Ga0373954_0034702 3300035118 Bacteria 2337
106 Ga0373956_0000217 3300035119 Bacteria 22642
107 Ga0373943_0026044 3300035170 Bacteria 2737
108 Ga0373946_0039651 3300035171 Bacteria 1923
109 Ga0373955_0002508 3300035172 Bacteria 8024
110 Ga0373924_0034896 3300035410 Bacteria 2038
111 Ga0373931_0001508 3300035691 Bacteria 10029
112 Ga0373931_0076982 3300035691 Bacteria 1833
113 Ga0373935_0088896 3300035692 Bacteria 2019
114 Ga0373927_0013459 3300035695 Bacteria 5436
115 Ga0373927_0015753 3300035695 Bacteria 4991
116 Ga0373927_0037156 3300035695 Bacteria 3166
117 Ga0373927_0066714 3300035695 Bacteria 2328
118 Ga0373933_0000890 3300035724 Bacteria 18271
119 Ga0373933_0008350 3300035724 Bacteria 5655
120 Ga0373937_0003383 3300036401 Bacteria 13393
121 Ga0373937_0024351 3300036401 Bacteria 5458
122 Ga0373937_0031163 3300036401 Bacteria 4829
123 Ga0373925_0040581 3300037068 Bacteria 3446
124 Ga0395898_0109224 3300037466 Bacteria 2652
125 Ga0395905_0048939 3300037471 Bacteria 3961
126 Ga0436364_1258638 3300037853 Bacteria 2432
127 Ga0451807_1184934 3300041486 Bacteria 3978
128 Ga0451577_0147577 3300042876 Bacteria 2115
129 Ga0451577_0453408 3300042876 Bacteria 1165
130 Ga0466968_0054743 3300044735 Bacteria 1710
131 Ga0451576_0003058 3300045051 Bacteria 23525
132 Ga0451576_0035660 3300045051 Bacteria 5276
133 Ga0495592_0001709 3300046454 Bacteria 15422
134 Ga0495592_0023021 3300046454 Bacteria 4740
135 Ga0495629_0074005 3300046459 Bacteria 2379
136 Ga0495638_0005289 3300046460 Bacteria 9641
137 Ga0495641_0017102 3300046461 Bacteria 3791
138 Ga0495650_0011269 3300046471 Bacteria 4913
139 Ga0495580_0047009 3300046472 Bacteria 3060
140 Ga0495605_0009957 3300046474 Bacteria 5327
141 Ga0495639_0005321 3300046475 Bacteria 5543
142 Ga0495662_0013960 3300046476 Bacteria 3910
143 Ga0495664_0010119 3300046477 Bacteria 5292
144 Ga0495584_0068536 3300046491 Bacteria 1782
145 Ga0495585_0029958 3300046492 Bacteria 3096
146 Ga0495594_0043008 3300046499 Bacteria 2475
147 Ga0495608_0135203 3300046511 Bacteria 1576
148 Ga0495618_0021154 3300046514 Bacteria 4010
149 Ga0495618_0039073 3300046514 Bacteria 2983
150 Ga0495618_0066587 3300046514 Bacteria 2290
151 Ga0495628_0012660 3300046516 Bacteria 7105
152 Ga0495628_0023985 3300046516 Bacteria 4999
153 Ga0495628_0106351 3300046516 Bacteria 2161
154 Ga0495628_0265701 3300046516 Bacteria 1277
155 Ga0495630_0015719 3300046517 Bacteria 5529
156 Ga0495630_0016417 3300046517 Bacteria 5410
157 Ga0495630_0164908 3300046517 Bacteria 1687
158 Ga0495666_0014735 3300046526 Bacteria 3890
159 Ga0495666_0033123 3300046526 Bacteria 2526
160 Ga0495642_0015609 3300046528 Bacteria 2955
161 Ga0495652_0006768 3300046529 Bacteria 10629
162 Ga0495652_0047114 3300046529 Bacteria 3698
163 Ga0495665_0022594 3300046531 Bacteria 3380
164 Ga0495640_0001127 3300046533 Bacteria 20904
165 Ga0495586_0001289 3300046535 Bacteria 14028
166 Ga0495586_0025312 3300046535 Bacteria 3174
167 Ga0495587_0082964 3300046536 Bacteria 1857
168 Ga0495597_0028017 3300046542 Bacteria 2580
169 Ga0495597_0040408 3300046542 Bacteria 2085
170 Ga0495667_0022769 3300046559 Bacteria 4220
171 Ga0495667_0051199 3300046559 Bacteria 2725
172 Ga0495634_0003682 3300046642 Bacteria 12234
173 Ga0495635_0035573 3300046663 Bacteria 3453
174 Ga0495635_0060073 3300046663 Bacteria 2613
175 Ga0495661_0009677 3300046665 Bacteria 6602
176 Ga0495657_0037587 3300046675 Bacteria 3336
177 Ga0495599_0001302 3300046678 Bacteria 14182
178 Ga0495599_0009893 3300046678 Bacteria 5836
179 Ga0495599_0010098 3300046678 Bacteria 5779
180 Ga0495647_0004029 3300046681 Bacteria 4741
181 Ga0495669_0134188 3300046684 Bacteria 1167
182 Ga0495613_0019039 3300046689 Bacteria 5116
183 Ga0495670_0006194 3300046691 Bacteria 5875
184 Ga0495589_0007356 3300046794 Bacteria 5767
185 Ga0495600_0005483 3300046809 Bacteria 7652
186 Ga0495600_0024801 3300046809 Bacteria 3861
187 Ga0495604_0023195 3300047317 Bacteria 4953
188 Ga0495604_0167803 3300047317 Bacteria 1546
189 Ga0495680_0009316 3300047322 Bacteria 8842
190 Ga0495675_0021322 3300047444 Bacteria 4125
191 Ga0495684_0118129 3300047471 Bacteria 1998
192 Ga0495684_0214177 3300047471 Bacteria 1415
193 Ga0495684_0220142 3300047471 Bacteria 1392
194 Ga0495593_0114437 3300047673 Bacteria 1376
195 Ga0496100_0045065 3300048903 Bacteria 2829
196 Ga0496102_0019147 3300048905 Bacteria 6026
197 Ga0496103_0010251 3300048906 Bacteria 5543
198 Ga0496104_0001165 3300048907 Bacteria 22516
199 Ga0496104_0001232 3300048907 Bacteria 22026
200 Ga0496105_0009766 3300048908 Bacteria 7517
201 Ga0496105_0018726 3300048908 Bacteria 5574
202 Ga0496108_0044805 3300048911 Bacteria 3693
203 Ga0496108_0077189 3300048911 Bacteria 2817
204 Ga0496108_0443248 3300048911 Bacteria 1134
205 Ga0496109_0067477 3300048912 Bacteria 3277
206 Ga0496109_0139810 3300048912 Bacteria 2264
207 Ga0496112_0060933 3300048915 Bacteria 3719
208 Ga0496113_0087250 3300048916 Bacteria 2399
209 Ga0496121_0006133 3300048924 Bacteria 15094
210 Ga0496121_0006929 3300048924 Bacteria 13815
211 Ga0496121_0012042 3300048924 Bacteria 9503
212 Ga0496122_0052646 3300048925 Bacteria 3079
213 Ga0496123_0130425 3300048926 Bacteria 1394
214 Ga0496124_0000007 3300048927 Bacteria 883534
215 Ga0496125_0006129 3300048928 Bacteria 13119
216 Ga0496125_0092704 3300048928 Bacteria 2257
217 Ga0496125_0100249 3300048928 Bacteria 2136
218 Ga0496126_0263180 3300048929 Bacteria 1433
219 Ga0501033_0102662 3300049570 Bacteria 2086
220 Ga0501037_0334435 3300049573 Bacteria 1047
221 Ga0501038_0014925 3300049574 Bacteria 7073
222 Ga0501043_0078033 3300049579 Bacteria 2602
223 Ga0501047_0038460 3300049581 Bacteria 4629
224 Ga0501047_0056936 3300049581 Bacteria 3781
225 Ga0501067_0054705 3300049583 Bacteria 2211
226 Ga0501070_0142370 3300049586 Bacteria 1980
227 Ga0501072_0010245 3300049588 Bacteria 7140
228 Ga0501073_0006736 3300049589 Bacteria 8557
229 Ga0501073_0060221 3300049589 Bacteria 2650
230 Ga0501080_0006555 3300049742 Bacteria 10463
231 Ga0501080_0475132 3300049742 Bacteria 1119
232 Ga0501083_0016368 3300049744 Bacteria 5190
233 Ga0501083_0056408 3300049744 Bacteria 2632
234 Ga0501035_0009310 3300049822 Bacteria 9127
235 Ga0501035_0076787 3300049822 Bacteria 2953
236 Ga0501044_0007404 3300049823 Bacteria 12071
237 Ga0501044_0018620 3300049823 Bacteria 7439
238 Ga0501044_0039331 3300049823 Bacteria 4935
239 nmdc:mga03683_5989_c1 3300050489 Bacteria 4142
240 nmdc:mga03n38_3092_c1 3300050490 Bacteria 5284
241 nmdc:mga00v17_84341_c1 3300050491 Bacteria 1989
242 nmdc:mga00v17_911_c1 3300050491 Bacteria 15927
243 nmdc:mga0k408_11290_c1 3300050493 Bacteria 4860
244 nmdc:mga06z11_5449_c1 3300050494 Bacteria 5107
245 nmdc:mga04h51_4575_c1 3300050495 Bacteria 3456
246 nmdc:mga05p37_10233_c1 3300050507 Bacteria 11137
247 nmdc:mga05p37_2602_c1 3300050507 Bacteria 21010
248 nmdc:mga09592_11741_c1 3300050508 Bacteria 7122
249 nmdc:mga06r32_185703_c1 3300050510 Bacteria 2066
250 nmdc:mga06r32_71173_c1 3300050510 Bacteria 3365
251 nmdc:mga08y16_212767_c1 3300050511 Bacteria 2002
252 nmdc:mga0n895_52919_c1 3300050512 Bacteria 3987
253 nmdc:mga0rr50_179817_c1 3300050513 Bacteria 1728
254 nmdc:mga08x19_6696_c1 3300050514 Bacteria 6837
255 nmdc:mga0sz30_18028_c1 3300050516 Bacteria 2821
256 Ga0495601_0108424 3300053077 Bacteria 1797
257 Ga0495619_0045770 3300053085 Bacteria 2875
258 Ga0500646_0000802 3300053090 Bacteria 8721
259 Ga0500562_007879 3300053108 Bacteria 2690
260 Ga0500655_001166 3300053133 Bacteria 5019
261 Ga0500568_0039891 3300053139 Bacteria 1893
262 Ga0500586_004372 3300053145 Bacteria 3450
263 Ga0500604_0000636 3300053151 Bacteria 9639
264 Ga0501084_0005407 3300054114 Bacteria 10470
265 Ga0501082_0151095 3300060353 Bacteria 2017
266 2739612046 2739367655 Bacteria 4051151
267 2855734375 2855730933 Bacteria 7047938
268 2855769965 2855767633 Bacteria 7049357
269 2857544228 2857542790 Bacteria 5326616
270 2858954821 2858950400 Bacteria 6783797
271 2881101379 2881101125 Bacteria 4590519
272 2881414215 2881412998 Bacteria 6492157
273 2887378630 2887375801 Bacteria 5334027
274 2904542308 2904541872 Bacteria 8915136
275 8055226106 8055225921 Bacteria 3341787
276 Ga0495643_0006604
277 JGI25151J46595_10000096
278 Ga0055540_1002805
279 Ga0070676_10011534
280 Ga0070670_100050385
281 Ga0070689_100017327
282 Ga0070668_100010883
283 Ga0070668_100220162
284 Ga0070669_100027155
285 Ga0070675_100029424
286 Ga0070674_100027493
287 Ga0070667_100084956
288 Ga0070694_100016459
289 Ga0070678_100024864
290 Ga0070678_100102312
291 Ga0070698_100040283
292 Ga0070672_100044235
293 Ga0070704_100058648
294 Ga0068852_100017476
295 Ga0068859_100015682
296 Ga0068859_100060420
297 Ga0068864_100145337
298 Ga0068858_100005548
299 Ga0068860_100003672
300 Ga0068860_100010035
301 Ga0068862_100002231
302 Ga0081540_1046816
303 Ga0075368_10008159
304 Ga0075363_100009177
305 Ga0075364_10055654
306 Ga0070715_10111555
307 Ga0075362_10008233
308 Ga0075366_10051688
309 Ga0097621_100066707
310 Ga0075370_10036510
311 Ga0075428_100257963
312 Ga0075431_100009851
313 Ga0075431_100031729
314 Ga0075434_100094130
315 Ga0075429_100000768
316 Ga0075436_100079296
317 Ga0097620_100015684
318 Ga0097620_100060420
319 Ga0105240_10009713
320 Ga0114129_10011834
321 Ga0114129_10017278
322 Ga0105243_10000807
323 Ga0105241_10034071
324 Ga0105237_10423847
325 Ga0157378_10061850
326 Ga0163162_10252538
327 Ga0163163_10022642
328 Ga0157380_10064298
329 Ga0157379_10003457
330 Ga0157376_10087436
331 Ga0163161_10017378
332 Ga0224712_10013312
333 Ga0228598_1003225
334 Ga0209676_1000071
335 Ga0209025_1000003
336 Ga0209025_1000038
337 Ga0209051_1000261
338 Ga0209257_1012876
339 Ga0207685_10076965
340 Ga0207645_10021993
341 Ga0207654_10007127
342 Ga0207695_10140471
343 Ga0207681_10019431
344 Ga0207650_10001629
345 Ga0207650_10014074
346 Ga0207659_10122225
347 Ga0207687_10000556
348 Ga0207644_10054865
349 Ga0207670_10018117
350 Ga0207669_10006890
351 Ga0207691_10081740
352 Ga0207711_10055260
353 Ga0207679_10114596
354 Ga0207668_10007525
355 Ga0207677_10258570
356 Ga0207703_10298528
357 Ga0207648_10299083
358 Ga0207676_10025769
359 Ga0207675_100016177
360 Ga0207683_10036532
361 Ga0207683_10168102
362 Ga0207698_10011759
363 Ga0209371_1000342
364 Ga0209588_1012456
365 Ga0268265_10002330
366 Ga0268264_10001080
367 Ga0268264_10011271
368 Ga0265337_1008237
369 Ga0307515_10093888
370 Ga0268256_1000291
371 Ga0307511_10000014
372 Ga0307513_10062525
373 Ga0307412_10004758
374 Ga0307412_10007553
375 Ga0307411_10040229
376 Ga0307507_10027937
377 Ga0373923_0008810
378 Ga0373932_0029397
379 Ga0373954_0011431
380 Ga0373954_0034702
381 Ga0373956_0000217
382 Ga0373943_0026044
383 Ga0373946_0039651
384 Ga0373955_0002508
385 Ga0373924_0034896
386 Ga0373931_0001508
387 Ga0373931_0076982
388 Ga0373935_0088896
389 Ga0373927_0013459
390 Ga0373927_0015753
391 Ga0373927_0037156
392 Ga0373927_0066714
393 Ga0373933_0000890
394 Ga0373933_0008350
395 Ga0373937_0003383
396 Ga0373937_0024351
397 Ga0373937_0031163
398 Ga0373925_0040581
399 Ga0395898_0109224
400 Ga0395905_0048939
401 Ga0436364_1258638
402 Ga0451807_1184934
403 Ga0451577_0147577
404 Ga0451577_0453408
405 Ga0466968_0054743
406 Ga0451576_0003058
407 Ga0451576_0035660
408 Ga0495592_0001709
409 Ga0495592_0023021
410 Ga0495629_0074005
411 Ga0495638_0005289
412 Ga0495641_0017102
413 Ga0495650_0011269
414 Ga0495580_0047009
415 Ga0495605_0009957
416 Ga0495639_0005321
417 Ga0495662_0013960
418 Ga0495664_0010119
419 Ga0495584_0068536
420 Ga0495585_0029958
421 Ga0495594_0043008
422 Ga0495608_0135203
423 Ga0495618_0021154
424 Ga0495618_0039073
425 Ga0495618_0066587
426 Ga0495628_0012660
427 Ga0495628_0023985
428 Ga0495628_0106351
429 Ga0495628_0265701
430 Ga0495630_0015719
431 Ga0495630_0016417
432 Ga0495630_0164908
433 Ga0495666_0014735
434 Ga0495666_0033123
435 Ga0495642_0015609
436 Ga0495652_0006768
437 Ga0495652_0047114
438 Ga0495665_0022594
439 Ga0495640_0001127
440 Ga0495586_0001289
441 Ga0495586_0025312
442 Ga0495587_0082964
443 Ga0495597_0028017
444 Ga0495597_0040408
445 Ga0495667_0022769
446 Ga0495667_0051199
447 Ga0495634_0003682
448 Ga0495635_0035573
449 Ga0495635_0060073
450 Ga0495661_0009677
451 Ga0495657_0037587
452 Ga0495599_0001302
453 Ga0495599_0009893
454 Ga0495599_0010098
455 Ga0495647_0004029
456 Ga0495669_0134188
457 Ga0495613_0019039
458 Ga0495670_0006194
459 Ga0495589_0007356
460 Ga0495600_0005483
461 Ga0495600_0024801
462 Ga0495604_0023195
463 Ga0495604_0167803
464 Ga0495680_0009316
465 Ga0495675_0021322
466 Ga0495684_0118129
467 Ga0495684_0214177
468 Ga0495684_0220142
469 Ga0495593_0114437
470 Ga0496100_0045065
471 Ga0496102_0019147
472 Ga0496103_0010251
473 Ga0496104_0001165
474 Ga0496104_0001232
475 Ga0496105_0009766
476 Ga0496105_0018726
477 Ga0496108_0044805
478 Ga0496108_0077189
479 Ga0496108_0443248
480 Ga0496109_0067477
481 Ga0496109_0139810
482 Ga0496112_0060933
483 Ga0496113_0087250
484 Ga0496121_0006133
485 Ga0496121_0006929
486 Ga0496121_0012042
487 Ga0496122_0052646
488 Ga0496123_0130425
489 Ga0496124_0000007
490 Ga0496125_0006129
491 Ga0496125_0092704
492 Ga0496125_0100249
493 Ga0496126_0263180
494 Ga0501033_0102662
495 Ga0501037_0334435
496 Ga0501038_0014925
497 Ga0501043_0078033
498 Ga0501047_0038460
499 Ga0501047_0056936
500 Ga0501067_0054705
501 Ga0501070_0142370
502 Ga0501072_0010245
503 Ga0501073_0006736
504 Ga0501073_0060221
505 Ga0501080_0006555
506 Ga0501080_0475132
507 Ga0501083_0016368
508 Ga0501083_0056408
509 Ga0501035_0009310
510 Ga0501035_0076787
511 Ga0501044_0007404
512 Ga0501044_0018620
513 Ga0501044_0039331
514 nmdc:mga03683_5989_c1
515 nmdc:mga03n38_3092_c1
516 nmdc:mga00v17_84341_c1
517 nmdc:mga00v17_911_c1
518 nmdc:mga0k408_11290_c1
519 nmdc:mga06z11_5449_c1
520 nmdc:mga04h51_4575_c1
521 nmdc:mga05p37_10233_c1
522 nmdc:mga05p37_2602_c1
523 nmdc:mga09592_11741_c1
524 nmdc:mga06r32_185703_c1
525 nmdc:mga06r32_71173_c1
526 nmdc:mga08y16_212767_c1
527 nmdc:mga0n895_52919_c1
528 nmdc:mga0rr50_179817_c1
529 nmdc:mga08x19_6696_c1
530 nmdc:mga0sz30_18028_c1
531 Ga0495601_0108424
532 Ga0495619_0045770
533 Ga0500646_0000802
534 Ga0500562_007879
535 Ga0500655_001166
536 Ga0500568_0039891
537 Ga0500586_004372
538 Ga0500604_0000636
539 Ga0501084_0005407
540 Ga0501082_0151095
541 2739612046
542 2855734375
543 2855769965
544 2857544228
545 2858954821
546 2881101379
547 2881414215
548 2887378630
549 2904542308
550 8055226106

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

43

408

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9422 3 371
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9368 4 368
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9359 2 373
5yx6-assembly1.cif.gz_B crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9339 3 372
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9308 2 373
ID Description Score Start End Superfamily
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9878 224 315 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9871 224 315 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9773 224 315 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9766 224 315 3.30.1540.10
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9695 226 312 3.30.1540.10
ID Description Score Start End GO Terms
AF-A0A401TUH6-F1-model_v4 CoA transferase 0.9837 119 340 GO:0008410
AF-A0A3M2ECN0-F1-model_v4 CoA transferase 0.9811 7 393 GO:0008410
AF-A0A2A3G954-F1-model_v4 CoA transferase 0.9739 3 393 GO:0008410
AF-X1CTU1-F1-model_v4 CoA transferase 0.9724 63 280 GO:0008410
AF-A0A2A3G954-F1-model_v4 CoA transferase 0.9715 3 393 GO:0008410

Map