F380583

General Info

Members Datasets Scaffolds Average Seq Length
275 179 550 305

Family's Representative Sequence

Representative Sequence 3300041451|Ga0451791_0896854|Ga0451791_0896854_11_1120
Length 369
Sequence MTGAAVASPTDVAASLTGQGYLPDEGIATAAFLSISLQRPLLLEGEAGVGKTELAKALAAMTGGELIRLQCYEGIDVSQAVYDWDYARQLLHLRAAEATGETASRSADDLEAELYGERFLIKRALLRAIEPIEGPPPVLLIDEIDRADDEFEAYLLEVLSDYQITVPEIGVYRAGRPPLVVLTSNRTRDVHDALKRRCLYHWVEHPDFEREVAIVKLRVPGVDDALARQVAGAVEALRELNLYKPPGVAETIDWAMALGRLGATRLDEAMVANTLGAVIKYREDGQRTRSEYRFTDKGLALIPVLVALMDWGNTYAADDDGPPITVFHHECGGEVHAALVCEHGHVLEGHRQTRVRPGPGARPLRQSVA

Samples

Sample ID Description Type Environment
1 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
8 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
9 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
10 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
29 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
30 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
54 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
55 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
56 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
57 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
61 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
62 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
65 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
66 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
67 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
68 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
69 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
70 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
73 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
74 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
75 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
76 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
89 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
90 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
111 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
119 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
120 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
123 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
162 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
168 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
169 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
170 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
171 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
172 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
173 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
174 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
175 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
179 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 0.73
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.82
Nodule 0
Rhizoplane 5.45
Rhizosphere 77.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451791_0896854 3300041451 Bacteria 1443
2 Ga0068869_100090134 3300005334 Bacteria 2304
3 Ga0070674_100005961 3300005356 Bacteria 7084
4 Ga0070659_100005915 3300005366 Bacteria 8815
5 Ga0070709_10000160 3300005434 Bacteria 43304
6 Ga0070709_10058433 3300005434 Bacteria 2446
7 Ga0070709_10138024 3300005434 Bacteria 1672
8 Ga0070713_100015434 3300005436 Bacteria 5711
9 Ga0070702_100081642 3300005615 Bacteria 1938
10 Ga0068858_100139140 3300005842 Bacteria 2279
11 Ga0068860_100029269 3300005843 Bacteria 5297
12 Ga0068862_100049395 3300005844 Bacteria 3593
13 Ga0070717_10002519 3300006028 Bacteria 12896
14 Ga0070717_10012272 3300006028 Bacteria 6533
15 Ga0075365_10003285 3300006038 Bacteria 8295
16 Ga0075365_10010802 3300006038 Bacteria 5338
17 Ga0075365_10017758 3300006038 Bacteria 4361
18 Ga0075365_10131958 3300006038 Bacteria 1729
19 Ga0075368_10011029 3300006042 Bacteria 3282
20 Ga0075363_100043770 3300006048 Bacteria 2369
21 Ga0075363_100055769 3300006048 Bacteria 2117
22 Ga0075364_10000967 3300006051 Bacteria 15151
23 Ga0075364_10142711 3300006051 Bacteria 1611
24 Ga0070716_100008243 3300006173 Bacteria 5165
25 Ga0075362_10047494 3300006177 Bacteria 1912
26 Ga0068871_100169077 3300006358 Bacteria 1873
27 Ga0111539_10066886 3300009094 Bacteria 4245
28 Ga0105243_10046413 3300009148 Bacteria 3417
29 Ga0105243_10347835 3300009148 Bacteria 1360
30 Ga0105242_10001872 3300009176 Bacteria 16540
31 Ga0105249_10106695 3300009553 Bacteria 2643
32 Ga0105249_10144885 3300009553 Bacteria 2281
33 Ga0105249_10283543 3300009553 Bacteria 1655
34 Ga0105239_10503628 3300010375 Bacteria 1377
35 Ga0157369_10006637 3300013105 Bacteria 13384
36 Ga0157378_10011793 3300013297 Bacteria 7652
37 Ga0163163_10195843 3300014325 Bacteria 2069
38 Ga0157379_10028993 3300014968 Bacteria 4922
39 Ga0163161_10235768 3300017792 Bacteria 1421
40 Ga0213874_10051633 3300021377 Bacteria 1263
41 Ga0224712_10002452 3300022467 Bacteria 4580
42 Ga0224712_10101281 3300022467 Bacteria 1222
43 Ga0207699_10000118 3300025906 Bacteria 55994
44 Ga0207699_10149630 3300025906 Bacteria 1543
45 Ga0207663_10013559 3300025916 Bacteria 4433
46 Ga0207650_10275709 3300025925 Bacteria 1368
47 Ga0207700_10004322 3300025928 Bacteria 8357
48 Ga0207664_10001110 3300025929 Bacteria 17923
49 Ga0207690_10020745 3300025932 Bacteria 4065
50 Ga0207686_10146707 3300025934 Bacteria 1637
51 Ga0207709_10012788 3300025935 Bacteria 4629
52 Ga0207669_10029317 3300025937 Bacteria 3042
53 Ga0207669_10282938 3300025937 Bacteria 1252
54 Ga0207641_10417139 3300026088 Bacteria 1292
55 Ga0207648_10001856 3300026089 Bacteria 23079
56 Ga0207676_10065383 3300026095 Bacteria 2896
57 Ga0207675_100022266 3300026118 Bacteria 5901
58 Ga0207675_100088308 3300026118 Bacteria 2912
59 Ga0207683_10102568 3300026121 Bacteria 2555
60 Ga0209813_10024914 3300027866 Bacteria 1716
61 Ga0207428_10096482 3300027907 Bacteria 2289
62 Ga0268264_10010297 3300028381 Bacteria 7737
63 Ga0307515_10100325 3300028794 Bacteria 3506
64 Ga0307512_10018396 3300030522 Bacteria 6387
65 Ga0265325_10005853 3300031241 Bacteria 7533
66 Ga0265325_10030315 3300031241 Bacteria 2901
67 Ga0265339_10066921 3300031249 Bacteria 1922
68 Ga0265316_10287192 3300031344 Bacteria 1201
69 Ga0307513_10074595 3300031456 Bacteria 3526
70 Ga0307513_10187315 3300031456 Bacteria 1925
71 Ga0307509_10293241 3300031507 Bacteria 1380
72 Ga0265313_10051785 3300031595 Bacteria 1963
73 Ga0307514_10010980 3300031649 Bacteria 7560
74 Ga0307514_10121930 3300031649 Bacteria 1816
75 Ga0316579_10095673 3300031691 Bacteria 1420
76 Ga0265314_10039345 3300031711 Bacteria 3407
77 Ga0265342_10037329 3300031712 Bacteria 2964
78 Ga0316576_10006097 3300031727 Bacteria 7461
79 Ga0316576_10012566 3300031727 Bacteria 5598
80 Ga0316576_10037266 3300031727 Bacteria 3480
81 Ga0316578_10035188 3300031728 Bacteria 2878
82 Ga0316578_10048055 3300031728 Bacteria 2491
83 Ga0316578_10110187 3300031728 Bacteria 1653
84 Ga0316577_10029906 3300031733 Bacteria 3040
85 Ga0307415_100020686 3300032126 Bacteria 4024
86 Ga0316585_10066812 3300032137 Bacteria 1165
87 Ga0316580_10014199 3300032139 Bacteria 2432
88 Ga0307507_10000433 3300033179 Bacteria 87427
89 Ga0316574_0009899 3300035398 Bacteria 5360
90 Ga0316574_0022334 3300035398 Bacteria 3766
91 Ga0316574_0027683 3300035398 Bacteria 3415
92 Ga0316584_0081495 3300036712 Bacteria 2423
93 Ga0316584_0097144 3300036712 Bacteria 2205
94 Ga0316584_0107358 3300036712 Bacteria 2089
95 Ga0400485_10207 3300038735 Bacteria 33642
96 Ga0400483_119646 3300039062 Bacteria 31679
97 Ga0400483_150785 3300039062 Bacteria 24240
98 Ga0400483_177895 3300039062 Bacteria 2829
99 Ga0400483_202059 3300039062 Bacteria 5829
100 Ga0400483_259530 3300039062 Bacteria 20569
101 Ga0400483_277492 3300039062 Bacteria 4517
102 Ga0436363_0463506 3300039450 Bacteria 2554
103 Ga0451837_1604360 3300041494 Bacteria 2434
104 Ga0451853_2028455 3300041512 Bacteria 2665
105 Ga0439446_0055935 3300042156 Bacteria 1185
106 Ga0451577_0012738 3300042876 Bacteria 7889
107 Ga0453684_0002246 3300044712 Bacteria 47929
108 Ga0466959_0089294 3300045049 Bacteria 2214
109 Ga0495592_0132700 3300046454 Bacteria 1740
110 Ga0495653_0007233 3300046463 Bacteria 9093
111 Ga0495580_0018069 3300046472 Bacteria 5255
112 Ga0495605_0062949 3300046474 Bacteria 1771
113 Ga0495662_0000180 3300046476 Bacteria 25419
114 Ga0495662_0188322 3300046476 Bacteria 1017
115 Ga0495664_0002324 3300046477 Bacteria 10189
116 Ga0495594_0155609 3300046499 Bacteria 1298
117 Ga0495608_0001977 3300046511 Bacteria 14691
118 Ga0495628_0035817 3300046516 Bacteria 3986
119 Ga0495628_0100052 3300046516 Bacteria 2238
120 Ga0495630_0100206 3300046517 Bacteria 2191
121 Ga0495632_0122283 3300046519 Bacteria 1216
122 Ga0495643_0031661 3300046522 Bacteria 2942
123 Ga0495643_0033202 3300046522 Bacteria 2858
124 Ga0495643_0055137 3300046522 Bacteria 2125
125 Ga0495648_0095834 3300046524 Bacteria 1650
126 Ga0495666_0024408 3300046526 Bacteria 2986
127 Ga0495652_0073520 3300046529 Bacteria 2846
128 Ga0495665_0000628 3300046531 Bacteria 17967
129 Ga0495640_0007403 3300046533 Bacteria 8633
130 Ga0495640_0102337 3300046533 Bacteria 1879
131 Ga0495587_0010403 3300046536 Bacteria 5923
132 Ga0495645_0032218 3300046543 Bacteria 3822
133 Ga0495667_0016990 3300046559 Bacteria 4912
134 Ga0495667_0093036 3300046559 Bacteria 1952
135 Ga0495656_0089845 3300046615 Bacteria 1403
136 Ga0495634_0016702 3300046642 Bacteria 5244
137 Ga0495634_0200848 3300046642 Bacteria 1238
138 Ga0495625_0012915 3300046660 Bacteria 6744
139 Ga0495635_0092875 3300046663 Bacteria 2063
140 Ga0495657_0007019 3300046675 Bacteria 8738
141 Ga0495657_0050921 3300046675 Bacteria 2782
142 Ga0495657_0076096 3300046675 Bacteria 2181
143 Ga0495599_0031103 3300046678 Bacteria 3350
144 Ga0495623_0038665 3300046679 Bacteria 3050
145 Ga0495646_0012206 3300046680 Bacteria 5462
146 Ga0495613_0006155 3300046689 Bacteria 8981
147 Ga0495613_0075778 3300046689 Bacteria 2448
148 Ga0495613_0100276 3300046689 Bacteria 2091
149 Ga0495624_0017246 3300046690 Bacteria 4852
150 Ga0495670_0150064 3300046691 Bacteria 1222
151 Ga0495649_0061848 3300046694 Bacteria 2013
152 Ga0495600_0130591 3300046809 Bacteria 1633
153 Ga0495660_0097484 3300046810 Bacteria 1518
154 Ga0495581_0004504 3300047315 Bacteria 8053
155 Ga0495604_0000112 3300047317 Bacteria 68573
156 Ga0495604_0025059 3300047317 Bacteria 4755
157 Ga0495604_0265060 3300047317 Bacteria 1166
158 Ga0495636_0018015 3300047318 Bacteria 2832
159 Ga0495674_0019805 3300047319 Bacteria 6238
160 Ga0495676_0052299 3300047321 Bacteria 3261
161 Ga0495680_0042951 3300047322 Bacteria 3583
162 Ga0495687_002926 3300047443 Bacteria 12984
163 Ga0495685_002020 3300047447 Bacteria 6304
164 Ga0495685_002562 3300047447 Bacteria 5711
165 Ga0495681_0002481 3300047470 Bacteria 13163
166 Ga0495593_0091663 3300047673 Bacteria 1564
167 Ga0495602_0046914 3300048088 Bacteria 3897
168 Ga0495614_0031640 3300048089 Bacteria 2277
169 Ga0495614_0175161 3300048089 Bacteria 963
170 Ga0496100_0280270 3300048903 Bacteria 1242
171 Ga0496102_0065932 3300048905 Bacteria 3319
172 Ga0496102_0121602 3300048905 Bacteria 2439
173 Ga0496103_0128214 3300048906 Bacteria 1619
174 Ga0496104_0055665 3300048907 Bacteria 3740
175 Ga0496105_0099331 3300048908 Bacteria 2403
176 Ga0496105_0491600 3300048908 Bacteria 964
177 Ga0496109_0065251 3300048912 Bacteria 3333
178 Ga0496109_0509029 3300048912 Bacteria 1136
179 Ga0496110_0022032 3300048913 Bacteria 5404
180 Ga0496111_0012961 3300048914 Bacteria 5659
181 Ga0496111_0164386 3300048914 Bacteria 1648
182 Ga0496114_0006081 3300048917 Bacteria 9501
183 Ga0496114_0039295 3300048917 Bacteria 3915
184 Ga0501031_0023486 3300049568 Bacteria 4020
185 Ga0501031_0123920 3300049568 Bacteria 1688
186 Ga0501031_0144680 3300049568 Bacteria 1553
187 Ga0501031_0147205 3300049568 Bacteria 1539
188 Ga0501032_0002410 3300049569 Bacteria 14586
189 Ga0501034_0008101 3300049571 Bacteria 11146
190 Ga0501034_0017722 3300049571 Bacteria 7304
191 Ga0501036_0008752 3300049572 Bacteria 8307
192 Ga0501036_0116150 3300049572 Bacteria 2260
193 Ga0501036_0201625 3300049572 Bacteria 1673
194 Ga0501036_0229003 3300049572 Bacteria 1560
195 Ga0501037_0000990 3300049573 Bacteria 21062
196 Ga0501037_0181555 3300049573 Bacteria 1493
197 Ga0501038_0034302 3300049574 Bacteria 4463
198 Ga0501038_0068786 3300049574 Bacteria 3010
199 Ga0501039_0076150 3300049575 Bacteria 2609
200 Ga0501039_0129045 3300049575 Bacteria 1984
201 Ga0501040_0115780 3300049576 Bacteria 1877
202 Ga0501040_0211727 3300049576 Bacteria 1378
203 Ga0501041_0063077 3300049577 Bacteria 2269
204 Ga0501041_0270199 3300049577 Bacteria 1069
205 Ga0501042_0006471 3300049578 Bacteria 7608
206 Ga0501043_0032484 3300049579 Bacteria 4104
207 Ga0501046_0254319 3300049580 Bacteria 1292
208 Ga0501047_0214170 3300049581 Bacteria 1784
209 Ga0501048_0229226 3300049582 Bacteria 1318
210 Ga0501048_0284661 3300049582 Bacteria 1175
211 Ga0501048_0303837 3300049582 Bacteria 1135
212 Ga0501068_0002107 3300049584 Bacteria 10609
213 Ga0501070_0014881 3300049586 Bacteria 6545
214 Ga0501071_0033123 3300049587 Bacteria 3672
215 Ga0501071_0070828 3300049587 Bacteria 2541
216 Ga0501071_0102756 3300049587 Bacteria 2108
217 Ga0501071_0149334 3300049587 Bacteria 1743
218 Ga0501072_0003014 3300049588 Bacteria 12700
219 Ga0501072_0012644 3300049588 Bacteria 6454
220 Ga0501072_0369281 3300049588 Bacteria 1139
221 Ga0501074_0014617 3300049590 Bacteria 5711
222 Ga0501074_0056862 3300049590 Bacteria 2819
223 Ga0501074_0114006 3300049590 Bacteria 1934
224 Ga0501074_0218540 3300049590 Bacteria 1357
225 Ga0501075_0021009 3300049591 Bacteria 4756
226 Ga0501075_0060537 3300049591 Bacteria 2853
227 Ga0501075_0153912 3300049591 Bacteria 1753
228 Ga0501075_0319439 3300049591 Bacteria 1183
229 Ga0501076_0016786 3300049592 Bacteria 5556
230 Ga0501076_0042514 3300049592 Bacteria 3578
231 Ga0501076_0057774 3300049592 Bacteria 3082
232 Ga0501076_0113791 3300049592 Bacteria 2189
233 Ga0501077_0026970 3300049593 Bacteria 3648
234 Ga0501079_0010268 3300049741 Bacteria 7111
235 Ga0501079_0178212 3300049741 Bacteria 1658
236 Ga0501079_0317186 3300049741 Bacteria 1220
237 Ga0501080_0148622 3300049742 Bacteria 2166
238 Ga0501081_0022061 3300049743 Bacteria 4257
239 Ga0501081_0358836 3300049743 Bacteria 1075
240 Ga0501035_0114940 3300049822 Bacteria 2356
241 Ga0501044_0001258 3300049823 Bacteria 29983
242 Ga0501045_0014183 3300049824 Bacteria 5645
243 Ga0501045_0034894 3300049824 Bacteria 3652
244 Ga0501045_0046651 3300049824 Bacteria 3155
245 Ga0501045_0067073 3300049824 Bacteria 2635
246 Ga0501045_0196973 3300049824 Bacteria 1501
247 nmdc:mga03683_78114_c1 3300050489 Bacteria 1425
248 nmdc:mga03n38_58868_c1 3300050490 Bacteria 1742
249 nmdc:mga00v17_275748_c1 3300050491 Bacteria 1091
250 nmdc:mga00v17_7957_c1 3300050491 Bacteria 5683
251 nmdc:mga0yw44_13574_c1 3300050492 Bacteria 4294
252 nmdc:mga0yw44_30048_c1 3300050492 Bacteria 3144
253 nmdc:mga0yw44_6816_c1 3300050492 Bacteria 5554
254 nmdc:mga04h51_37498_c1 3300050495 Bacteria 1565
255 nmdc:mga08x19_87451_c1 3300050514 Bacteria 2053
256 Ga0495601_0003804 3300053077 Bacteria 8686
257 Ga0500578_0029810 3300053086 Bacteria 3505
258 Ga0500560_025717 3300053107 Bacteria 1731
259 Ga0500569_035307 3300053109 Bacteria 1432
260 Ga0500652_056813 3300053131 Bacteria 1605
261 Ga0500658_0079508 3300053134 Bacteria 1399
262 Ga0500561_0014674 3300053137 Bacteria 1724
263 Ga0500573_0083367 3300053140 Bacteria 1815
264 Ga0500579_077486 3300053143 Bacteria 1880
265 Ga0501084_0014435 3300054114 Bacteria 6546
266 Ga0501084_0016280 3300054114 Bacteria 6175
267 Ga0501084_0091266 3300054114 Bacteria 2558
268 Ga0501084_0180071 3300054114 Bacteria 1784
269 Ga0501084_0370385 3300054114 Bacteria 1210
270 Ga0501082_0013128 3300060353 Bacteria 7123
271 Ga0501082_0221270 3300060353 Bacteria 1647
272 Ga0530510_0025212 3300061734 Bacteria 4251
273 Ga0530510_0028053 3300061734 Bacteria 4036
274 Ga0530510_0060895 3300061734 Bacteria 2732
275 2616696408 2616644814 Bacteria 11555299
276 Ga0451791_0896854
277 Ga0068869_100090134
278 Ga0070674_100005961
279 Ga0070659_100005915
280 Ga0070709_10000160
281 Ga0070709_10058433
282 Ga0070709_10138024
283 Ga0070713_100015434
284 Ga0070702_100081642
285 Ga0068858_100139140
286 Ga0068860_100029269
287 Ga0068862_100049395
288 Ga0070717_10002519
289 Ga0070717_10012272
290 Ga0075365_10003285
291 Ga0075365_10010802
292 Ga0075365_10017758
293 Ga0075365_10131958
294 Ga0075368_10011029
295 Ga0075363_100043770
296 Ga0075363_100055769
297 Ga0075364_10000967
298 Ga0075364_10142711
299 Ga0070716_100008243
300 Ga0075362_10047494
301 Ga0068871_100169077
302 Ga0111539_10066886
303 Ga0105243_10046413
304 Ga0105243_10347835
305 Ga0105242_10001872
306 Ga0105249_10106695
307 Ga0105249_10144885
308 Ga0105249_10283543
309 Ga0105239_10503628
310 Ga0157369_10006637
311 Ga0157378_10011793
312 Ga0163163_10195843
313 Ga0157379_10028993
314 Ga0163161_10235768
315 Ga0213874_10051633
316 Ga0224712_10002452
317 Ga0224712_10101281
318 Ga0207699_10000118
319 Ga0207699_10149630
320 Ga0207663_10013559
321 Ga0207650_10275709
322 Ga0207700_10004322
323 Ga0207664_10001110
324 Ga0207690_10020745
325 Ga0207686_10146707
326 Ga0207709_10012788
327 Ga0207669_10029317
328 Ga0207669_10282938
329 Ga0207641_10417139
330 Ga0207648_10001856
331 Ga0207676_10065383
332 Ga0207675_100022266
333 Ga0207675_100088308
334 Ga0207683_10102568
335 Ga0209813_10024914
336 Ga0207428_10096482
337 Ga0268264_10010297
338 Ga0307515_10100325
339 Ga0307512_10018396
340 Ga0265325_10005853
341 Ga0265325_10030315
342 Ga0265339_10066921
343 Ga0265316_10287192
344 Ga0307513_10074595
345 Ga0307513_10187315
346 Ga0307509_10293241
347 Ga0265313_10051785
348 Ga0307514_10010980
349 Ga0307514_10121930
350 Ga0316579_10095673
351 Ga0265314_10039345
352 Ga0265342_10037329
353 Ga0316576_10006097
354 Ga0316576_10012566
355 Ga0316576_10037266
356 Ga0316578_10035188
357 Ga0316578_10048055
358 Ga0316578_10110187
359 Ga0316577_10029906
360 Ga0307415_100020686
361 Ga0316585_10066812
362 Ga0316580_10014199
363 Ga0307507_10000433
364 Ga0316574_0009899
365 Ga0316574_0022334
366 Ga0316574_0027683
367 Ga0316584_0081495
368 Ga0316584_0097144
369 Ga0316584_0107358
370 Ga0400485_10207
371 Ga0400483_119646
372 Ga0400483_150785
373 Ga0400483_177895
374 Ga0400483_202059
375 Ga0400483_259530
376 Ga0400483_277492
377 Ga0436363_0463506
378 Ga0451837_1604360
379 Ga0451853_2028455
380 Ga0439446_0055935
381 Ga0451577_0012738
382 Ga0453684_0002246
383 Ga0466959_0089294
384 Ga0495592_0132700
385 Ga0495653_0007233
386 Ga0495580_0018069
387 Ga0495605_0062949
388 Ga0495662_0000180
389 Ga0495662_0188322
390 Ga0495664_0002324
391 Ga0495594_0155609
392 Ga0495608_0001977
393 Ga0495628_0035817
394 Ga0495628_0100052
395 Ga0495630_0100206
396 Ga0495632_0122283
397 Ga0495643_0031661
398 Ga0495643_0033202
399 Ga0495643_0055137
400 Ga0495648_0095834
401 Ga0495666_0024408
402 Ga0495652_0073520
403 Ga0495665_0000628
404 Ga0495640_0007403
405 Ga0495640_0102337
406 Ga0495587_0010403
407 Ga0495645_0032218
408 Ga0495667_0016990
409 Ga0495667_0093036
410 Ga0495656_0089845
411 Ga0495634_0016702
412 Ga0495634_0200848
413 Ga0495625_0012915
414 Ga0495635_0092875
415 Ga0495657_0007019
416 Ga0495657_0050921
417 Ga0495657_0076096
418 Ga0495599_0031103
419 Ga0495623_0038665
420 Ga0495646_0012206
421 Ga0495613_0006155
422 Ga0495613_0075778
423 Ga0495613_0100276
424 Ga0495624_0017246
425 Ga0495670_0150064
426 Ga0495649_0061848
427 Ga0495600_0130591
428 Ga0495660_0097484
429 Ga0495581_0004504
430 Ga0495604_0000112
431 Ga0495604_0025059
432 Ga0495604_0265060
433 Ga0495636_0018015
434 Ga0495674_0019805
435 Ga0495676_0052299
436 Ga0495680_0042951
437 Ga0495687_002926
438 Ga0495685_002020
439 Ga0495685_002562
440 Ga0495681_0002481
441 Ga0495593_0091663
442 Ga0495602_0046914
443 Ga0495614_0031640
444 Ga0495614_0175161
445 Ga0496100_0280270
446 Ga0496102_0065932
447 Ga0496102_0121602
448 Ga0496103_0128214
449 Ga0496104_0055665
450 Ga0496105_0099331
451 Ga0496105_0491600
452 Ga0496109_0065251
453 Ga0496109_0509029
454 Ga0496110_0022032
455 Ga0496111_0012961
456 Ga0496111_0164386
457 Ga0496114_0006081
458 Ga0496114_0039295
459 Ga0501031_0023486
460 Ga0501031_0123920
461 Ga0501031_0144680
462 Ga0501031_0147205
463 Ga0501032_0002410
464 Ga0501034_0008101
465 Ga0501034_0017722
466 Ga0501036_0008752
467 Ga0501036_0116150
468 Ga0501036_0201625
469 Ga0501036_0229003
470 Ga0501037_0000990
471 Ga0501037_0181555
472 Ga0501038_0034302
473 Ga0501038_0068786
474 Ga0501039_0076150
475 Ga0501039_0129045
476 Ga0501040_0115780
477 Ga0501040_0211727
478 Ga0501041_0063077
479 Ga0501041_0270199
480 Ga0501042_0006471
481 Ga0501043_0032484
482 Ga0501046_0254319
483 Ga0501047_0214170
484 Ga0501048_0229226
485 Ga0501048_0284661
486 Ga0501048_0303837
487 Ga0501068_0002107
488 Ga0501070_0014881
489 Ga0501071_0033123
490 Ga0501071_0070828
491 Ga0501071_0102756
492 Ga0501071_0149334
493 Ga0501072_0003014
494 Ga0501072_0012644
495 Ga0501072_0369281
496 Ga0501074_0014617
497 Ga0501074_0056862
498 Ga0501074_0114006
499 Ga0501074_0218540
500 Ga0501075_0021009
501 Ga0501075_0060537
502 Ga0501075_0153912
503 Ga0501075_0319439
504 Ga0501076_0016786
505 Ga0501076_0042514
506 Ga0501076_0057774
507 Ga0501076_0113791
508 Ga0501077_0026970
509 Ga0501079_0010268
510 Ga0501079_0178212
511 Ga0501079_0317186
512 Ga0501080_0148622
513 Ga0501081_0022061
514 Ga0501081_0358836
515 Ga0501035_0114940
516 Ga0501044_0001258
517 Ga0501045_0014183
518 Ga0501045_0034894
519 Ga0501045_0046651
520 Ga0501045_0067073
521 Ga0501045_0196973
522 nmdc:mga03683_78114_c1
523 nmdc:mga03n38_58868_c1
524 nmdc:mga00v17_275748_c1
525 nmdc:mga00v17_7957_c1
526 nmdc:mga0yw44_13574_c1
527 nmdc:mga0yw44_30048_c1
528 nmdc:mga0yw44_6816_c1
529 nmdc:mga04h51_37498_c1
530 nmdc:mga08x19_87451_c1
531 Ga0495601_0003804
532 Ga0500578_0029810
533 Ga0500560_025717
534 Ga0500569_035307
535 Ga0500652_056813
536 Ga0500658_0079508
537 Ga0500561_0014674
538 Ga0500573_0083367
539 Ga0500579_077486
540 Ga0501084_0014435
541 Ga0501084_0016280
542 Ga0501084_0091266
543 Ga0501084_0180071
544 Ga0501084_0370385
545 Ga0501082_0013128
546 Ga0501082_0221270
547 Ga0530510_0025212
548 Ga0530510_0028053
549 Ga0530510_0060895
550 2616696408

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

41

203

0.9

PF07728

AAA_5

AAA domain (dynein-related subfamily)

40

198

0.87

PF01638

HxlR

HxlR-like helix-turn-helix

268

320

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c3c-assembly1.cif.gz_B structural characterization of a newly identified component of alpha-carboxysomes: the aaa+ domain protein cso-cbbq 0.812 37 303
5c3c-assembly1.cif.gz_A structural characterization of a newly identified component of alpha-carboxysomes: the aaa+ domain protein cso-cbbq 0.8016 27 303
6l1q-assembly1.cif.gz_C crystal structure of afcbbq2, a moxr aaa+-atpase and cbbqo-type rubisco activase from acidithiobacillus ferrooxidans 0.7802 37 303
5c3c-assembly1.cif.gz_A structural characterization of a newly identified component of alpha-carboxysomes: the aaa+ domain protein cso-cbbq 0.7711 27 303
5c3c-assembly1.cif.gz_B structural characterization of a newly identified component of alpha-carboxysomes: the aaa+ domain protein cso-cbbq 0.7585 37 303
ID Description Score Start End Superfamily
af_P71922_29_212_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9759 30 215 3.40.50.300
af_P71922_29_212_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9655 30 215 3.40.50.300
af_O53705_22_210_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9504 32 216 3.40.50.300
af_O53705_22_210_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9263 32 216 3.40.50.300
af_P33348_59_238_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8408 27 214 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7K0TZP6-F1-model_v4 AAA domain-containing protein 0.9904 14 211 GO:0005524
GO:0016887
AF-A0A6I5C965-F1-model_v4 MoxR family ATPase 0.9877 64 169
AF-A0A1F7QBU3-F1-model_v4 ATPase 0.9867 15 267 GO:0005524
GO:0016887
AF-A0A2W4JI62-F1-model_v4 AAA+ ATPase domain-containing protein 0.9824 12 197 GO:0005524
GO:0016887
AF-A0A7Y2DN89-F1-model_v4 MoxR family ATPase 0.9817 12 302 GO:0005524
GO:0016887

Map