F380544

General Info

Members Datasets Scaffolds Average Seq Length
275 151 275 120

Family's Representative Sequence

Representative Sequence 3300035114|Ga0373939_0025007|Ga0373939_0025007_1172_1555
Length 127
Sequence MDIIDAVAGLSALAQHTRLAVFRLLVKAGPDGMPAGAIADALSVPPNTLSTHLAILARAGLVASRRESRSIIYSADQDGTAALLSFLVADCCGGRPDICAPLVRIAERAACEPAKPSRRAKASKGCS

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
91 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
121 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
122 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
145 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
146 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
147 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
150 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.82
Nodule 0
Rhizoplane 0.73
Rhizosphere 90.91
Stem 0
Stem Tuber 0
Unclassified 2.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000155 3300001989 Bacteria 22101
2 JGI24737J22298_10000087 3300001990 Bacteria 27343
3 JGI24738J21930_10001254 3300002075 Bacteria 7132
4 JGI25165J46597_1000003 3300003214 Bacteria 694080
5 JGI25165J46597_1043226 3300003214 Bacteria 578
6 JGI25153J46596_10001292 3300003215 Bacteria 14980
7 Ga0070658_10229447 3300005327 Bacteria 1572
8 Ga0070666_10044851 3300005335 Bacteria 2964
9 Ga0070666_10045833 3300005335 Bacteria 2931
10 Ga0070666_10306427 3300005335 Bacteria 1132
11 Ga0070682_101170876 3300005337 Bacteria 647
12 Ga0068868_100176453 3300005338 Bacteria 1771
13 Ga0068868_100640108 3300005338 Bacteria 946
14 Ga0070660_100017127 3300005339 Bacteria 5276
15 Ga0070660_101304696 3300005339 Bacteria 616
16 Ga0070661_100028540 3300005344 Bacteria 4025
17 Ga0070674_100027851 3300005356 Bacteria 3706
18 Ga0070674_100324571 3300005356 Bacteria 1235
19 Ga0070674_100561522 3300005356 Bacteria 959
20 Ga0070688_100767588 3300005365 Bacteria 752
21 Ga0070713_100777421 3300005436 Bacteria 917
22 Ga0070713_101266894 3300005436 Bacteria 714
23 Ga0070678_100014665 3300005456 Bacteria 4954
24 Ga0070678_100612414 3300005456 Bacteria 973
25 Ga0070662_100225602 3300005457 Bacteria 1497
26 Ga0070681_10000010 3300005458 Bacteria 140126
27 Ga0070679_100000194 3300005530 Bacteria 49506
28 Ga0070679_100031266 3300005530 Bacteria 5258
29 Ga0070679_100388887 3300005530 Bacteria 1341
30 Ga0068853_100033815 3300005539 Bacteria 4337
31 Ga0070672_100293375 3300005543 Bacteria 1377
32 Ga0070665_100054730 3300005548 Bacteria 4001
33 Ga0070665_100146059 3300005548 Bacteria 2368
34 Ga0070665_100203815 3300005548 Bacteria 1978
35 Ga0070665_101476972 3300005548 Bacteria 688
36 Ga0068855_100067162 3300005563 Bacteria 4179
37 Ga0068855_101299510 3300005563 Bacteria 753
38 Ga0068855_101762524 3300005563 Bacteria 630
39 Ga0068857_100291242 3300005577 Bacteria 1503
40 Ga0068854_101198701 3300005578 Bacteria 680
41 Ga0068852_100102527 3300005616 Bacteria 2586
42 Ga0068861_101556436 3300005719 Bacteria 650
43 Ga0068851_10068780 3300005834 Bacteria 1828
44 Ga0068858_100036008 3300005842 Bacteria 4589
45 Ga0097621_100015523 3300006237 Bacteria 5733
46 Ga0097621_100160698 3300006237 Bacteria 1931
47 Ga0097621_101066501 3300006237 Bacteria 758
48 Ga0068871_100013505 3300006358 Bacteria 6062
49 Ga0068871_100102832 3300006358 Bacteria 2395
50 Ga0068871_100109570 3300006358 Bacteria 2322
51 Ga0068871_101440846 3300006358 Bacteria 650
52 Ga0075434_100134747 3300006871 Bacteria 2489
53 Ga0075436_100068807 3300006914 Bacteria 2446
54 Ga0105240_10000444 3300009093 Bacteria 76383
55 Ga0105240_10004603 3300009093 Bacteria 20903
56 Ga0105240_10064287 3300009093 Bacteria 4560
57 Ga0105240_10167607 3300009093 Bacteria 2604
58 Ga0105240_10304754 3300009093 Bacteria 1821
59 Ga0105247_10061296 3300009101 Bacteria 2332
60 Ga0105243_10586939 3300009148 Bacteria 1070
61 Ga0105243_12109248 3300009148 Bacteria 599
62 Ga0105243_12918671 3300009148 Bacteria 518
63 Ga0105241_10058376 3300009174 Bacteria 2963
64 Ga0105241_10362119 3300009174 Bacteria 1262
65 Ga0105241_10365709 3300009174 Bacteria 1256
66 Ga0105248_10000001 3300009177 Bacteria 1881304
67 Ga0105248_11392744 3300009177 Bacteria 793
68 Ga0105237_10239970 3300009545 Bacteria 1814
69 Ga0105237_10868325 3300009545 Bacteria 909
70 Ga0105238_10001458 3300009551 Bacteria 23746
71 Ga0105238_10021981 3300009551 Bacteria 6499
72 Ga0105239_10013077 3300010375 Bacteria 9224
73 Ga0105239_10021339 3300010375 Bacteria 7142
74 Ga0105239_10081966 3300010375 Bacteria 3552
75 Ga0105246_10213407 3300011119 Bacteria 1508
76 Ga0157373_11493957 3300013100 Bacteria 516
77 Ga0157369_10002858 3300013105 Bacteria 20625
78 Ga0157369_10008356 3300013105 Bacteria 11871
79 Ga0157378_10021831 3300013297 Bacteria 5629
80 Ga0157378_10130250 3300013297 Bacteria 2328
81 Ga0157378_10936535 3300013297 Bacteria 898
82 Ga0163162_10979580 3300013306 Bacteria 956
83 Ga0157372_10204052 3300013307 Bacteria 2290
84 Ga0157372_11844016 3300013307 Bacteria 695
85 Ga0163163_12354923 3300014325 Bacteria 591
86 Ga0157379_10027950 3300014968 Bacteria 5019
87 Ga0157376_11046721 3300014969 Bacteria 840
88 Ga0157376_11140603 3300014969 Bacteria 806
89 Ga0213872_10003190 3300021361 Bacteria 9190
90 Ga0213872_10021960 3300021361 Bacteria 2939
91 Ga0213872_10047673 3300021361 Bacteria 1947
92 Ga0213872_10085230 3300021361 Bacteria 1416
93 Ga0213872_10212351 3300021361 Unclassified 826
94 Ga0213876_10529803 3300021384 Bacteria 627
95 Ga0209233_1000015 3300025261 Bacteria 980563
96 Ga0209233_1001453 3300025261 Bacteria 9349
97 Ga0209233_1016047 3300025261 Bacteria 2071
98 Ga0209455_1037995 3300025272 Bacteria 754
99 Ga0209758_1000008 3300025297 Bacteria 1215263
100 Ga0207656_10245210 3300025321 Unclassified 876
101 Ga0207680_10028398 3300025903 Bacteria 3129
102 Ga0207680_10039414 3300025903 Bacteria 2742
103 Ga0207680_10877434 3300025903 Bacteria 643
104 Ga0207645_10116535 3300025907 Bacteria 1732
105 Ga0207705_10154939 3300025909 Bacteria 1718
106 Ga0207654_10218630 3300025911 Bacteria 1262
107 Ga0207707_10000005 3300025912 Bacteria 382024
108 Ga0207695_10000004 3300025913 Bacteria 1288665
109 Ga0207695_10090445 3300025913 Bacteria 3076
110 Ga0207695_10098682 3300025913 Bacteria 2920
111 Ga0207695_10318523 3300025913 Bacteria 1445
112 Ga0207695_10600448 3300025913 Bacteria 982
113 Ga0207695_10612720 3300025913 Bacteria 970
114 Ga0207671_10044003 3300025914 Bacteria 3301
115 Ga0207671_10410186 3300025914 Bacteria 1078
116 Ga0207671_10504975 3300025914 Bacteria 964
117 Ga0207693_10176732 3300025915 Bacteria 1680
118 Ga0207660_10004816 3300025917 Bacteria 8780
119 Ga0207657_10000989 3300025919 Bacteria 30176
120 Ga0207649_10031391 3300025920 Bacteria 3157
121 Ga0207649_11342736 3300025920 Bacteria 566
122 Ga0207652_10018494 3300025921 Bacteria 5718
123 Ga0207652_10030476 3300025921 Bacteria 4518
124 Ga0207694_10000049 3300025924 Bacteria 160541
125 Ga0207694_10230450 3300025924 Bacteria 1512
126 Ga0207664_10996030 3300025929 Bacteria 751
127 Ga0207706_10085045 3300025933 Bacteria 2781
128 Ga0207709_11307510 3300025935 Bacteria 599
129 Ga0207669_10036598 3300025937 Bacteria 2807
130 Ga0207669_10260337 3300025937 Bacteria 1297
131 Ga0207691_10364552 3300025940 Bacteria 1235
132 Ga0207711_10000002 3300025941 Bacteria 1228676
133 Ga0207711_11803626 3300025941 Unclassified 555
134 Ga0207661_10208361 3300025944 Bacteria 1722
135 Ga0207667_10072019 3300025949 Bacteria 3592
136 Ga0207667_10145708 3300025949 Bacteria 2438
137 Ga0207667_11395809 3300025949 Bacteria 674
138 Ga0207640_11152193 3300025981 Bacteria 688
139 Ga0207677_10249057 3300026023 Bacteria 1442
140 Ga0207703_10025415 3300026035 Bacteria 4658
141 Ga0207639_10000300 3300026041 Bacteria 35006
142 Ga0207639_10111100 3300026041 Bacteria 2234
143 Ga0207639_10591324 3300026041 Bacteria 1022
144 Ga0207678_10048333 3300026067 Bacteria 3677
145 Ga0207702_10167850 3300026078 Bacteria 2010
146 Ga0207702_11437573 3300026078 Bacteria 683
147 Ga0207702_11460230 3300026078 Bacteria 677
148 Ga0207641_10088345 3300026088 Bacteria 2706
149 Ga0207683_10892619 3300026121 Bacteria 825
150 Ga0207683_11133336 3300026121 Bacteria 725
151 Ga0207698_10081836 3300026142 Bacteria 2608
152 Ga0207698_10218298 3300026142 Bacteria 1721
153 Ga0207698_11137821 3300026142 Bacteria 794
154 Ga0268266_10049671 3300028379 Bacteria 3598
155 Ga0268266_10062183 3300028379 Bacteria 3221
156 Ga0268266_10115980 3300028379 Bacteria 2378
157 Ga0268266_12064830 3300028379 Bacteria 543
158 Ga0265334_10015091 3300028573 Bacteria 3213
159 Ga0265334_10199865 3300028573 Bacteria 695
160 Ga0265318_10004108 3300028577 Bacteria 7136
161 Ga0265318_10201920 3300028577 Bacteria 727
162 Ga0265318_10350004 3300028577 Bacteria 539
163 Ga0265338_10000007 3300028800 Bacteria 498229
164 Ga0265338_10006586 3300028800 Bacteria 14732
165 Ga0265338_10230313 3300028800 Bacteria 1378
166 Ga0265338_10336322 3300028800 Bacteria 1089
167 Ga0265338_10807490 3300028800 Bacteria 642
168 Ga0265324_10128890 3300029957 Bacteria 859
169 Ga0265330_10518747 3300031235 Bacteria 508
170 Ga0265332_10039230 3300031238 Bacteria 2051
171 Ga0265332_10089327 3300031238 Bacteria 1304
172 Ga0265320_10000202 3300031240 Bacteria 48735
173 Ga0265320_10036072 3300031240 Bacteria 2502
174 Ga0265320_10110383 3300031240 Bacteria 1260
175 Ga0265325_10000001 3300031241 Bacteria 726814
176 Ga0265325_10002537 3300031241 Bacteria 12296
177 Ga0265325_10003104 3300031241 Bacteria 10967
178 Ga0265325_10017336 3300031241 Bacteria 4005
179 Ga0265329_10019608 3300031242 Bacteria 2294
180 Ga0265329_10070347 3300031242 Bacteria 1107
181 Ga0265329_10155934 3300031242 Bacteria 741
182 Ga0265340_10373630 3300031247 Bacteria 629
183 Ga0265339_10000769 3300031249 Bacteria 24846
184 Ga0265339_10007051 3300031249 Bacteria 7298
185 Ga0265339_10293906 3300031249 Bacteria 776
186 Ga0265331_10027053 3300031250 Bacteria 2879
187 Ga0265331_10214632 3300031250 Bacteria 865
188 Ga0265331_10297903 3300031250 Bacteria 722
189 Ga0265316_10500370 3300031344 Bacteria 868
190 Ga0265316_11148201 3300031344 Unclassified 538
191 Ga0265313_10002574 3300031595 Bacteria 15464
192 Ga0265313_10027692 3300031595 Bacteria 2962
193 Ga0265313_10028344 3300031595 Bacteria 2912
194 Ga0265314_10012857 3300031711 Bacteria 6801
195 Ga0265314_10015067 3300031711 Bacteria 6150
196 Ga0265314_10029662 3300031711 Bacteria 4061
197 Ga0265314_10117642 3300031711 Bacteria 1678
198 Ga0265314_10233267 3300031711 Bacteria 1066
199 Ga0265314_10290343 3300031711 Bacteria 921
200 Ga0265342_10135261 3300031712 Bacteria 1378
201 Ga0265342_10514599 3300031712 Unclassified 609
202 Ga0307516_10021204 3300031730 Bacteria 6696
203 Ga0307516_10060083 3300031730 Bacteria 3694
204 Ga0373939_0025007 3300035114 Bacteria 1669
205 Ga0373935_0080841 3300035692 Bacteria 2112
206 Ga0373937_0251642 3300036401 Bacteria 1666
207 Ga0373937_0438222 3300036401 Bacteria 1240
208 Ga0373937_0622694 3300036401 Bacteria 1024
209 Ga0436365_0667602 3300039437 Bacteria 1438
210 Ga0436361_0033289 3300039447 Bacteria 3384
211 Ga0436361_0209159 3300039447 Bacteria 4308
212 Ga0436361_0295484 3300039447 Bacteria 4938
213 Ga0436361_0357466 3300039447 Bacteria 4876
214 Ga0436361_0943985 3300039447 Bacteria 3015
215 Ga0436361_1130956 3300039447 Bacteria 1183
216 Ga0436363_0098309 3300039450 Bacteria 27510
217 Ga0451804_0198627 3300041463 Bacteria 526
218 Ga0451576_0780404 3300045051 Bacteria 1004
219 Ga0495592_0899849 3300046454 Bacteria 520
220 Ga0495650_0033604 3300046471 Bacteria 2281
221 Ga0495664_0109509 3300046477 Bacteria 1667
222 Ga0495630_0185420 3300046517 Bacteria 1587
223 Ga0495632_0306049 3300046519 Bacteria 704
224 Ga0495652_0232467 3300046529 Bacteria 1378
225 Ga0495645_0024639 3300046543 Bacteria 4366
226 Ga0495645_0037033 3300046543 Bacteria 3556
227 Ga0495645_0257103 3300046543 Bacteria 1158
228 Ga0495622_0023076 3300046557 Bacteria 2900
229 Ga0495611_0166959 3300046648 Bacteria 1029
230 Ga0495623_0265233 3300046679 Bacteria 961
231 Ga0495589_0071075 3300046794 Bacteria 1701
232 Ga0495674_0892515 3300047319 Bacteria 687
233 Ga0495675_0050501 3300047444 Bacteria 2644
234 Ga0496100_1642691 3300048903 Bacteria 508
235 Ga0496121_0001729 3300048924 Bacteria 35641
236 Ga0496126_0001133 3300048929 Bacteria 44417
237 Ga0501033_0071112 3300049570 Bacteria 2556
238 Ga0501033_0165452 3300049570 Bacteria 1590
239 Ga0501038_0068135 3300049574 Bacteria 3026
240 Ga0501038_0198123 3300049574 Bacteria 1613
241 Ga0501043_0369012 3300049579 Bacteria 1088
242 Ga0501043_0464565 3300049579 Bacteria 949
243 Ga0501046_0378919 3300049580 Bacteria 1024
244 Ga0501047_0022030 3300049581 Bacteria 6120
245 Ga0501047_0068145 3300049581 Bacteria 3428
246 Ga0501047_0069421 3300049581 Bacteria 3394
247 Ga0501047_0144191 3300049581 Bacteria 2259
248 Ga0501047_0514553 3300049581 Bacteria 1023
249 Ga0501070_0232221 3300049586 Bacteria 1511
250 Ga0501072_1277286 3300049588 Bacteria 569
251 Ga0501079_0628770 3300049741 Bacteria 845
252 Ga0501080_0004780 3300049742 Bacteria 12082
253 Ga0501080_0267719 3300049742 Bacteria 1556
254 Ga0501080_1255865 3300049742 Unclassified 635
255 Ga0501083_0069753 3300049744 Bacteria 2339
256 Ga0501083_0381735 3300049744 Bacteria 916
257 Ga0501035_0028307 3300049822 Bacteria 5116
258 Ga0501035_0714072 3300049822 Bacteria 807
259 Ga0501044_0137830 3300049823 Bacteria 2430
260 Ga0501044_1065569 3300049823 Bacteria 678
261 Ga0501044_1068512 3300049823 Bacteria 677
262 Ga0501044_1287072 3300049823 Bacteria 598
263 Ga0501044_1417084 3300049823 Bacteria 560
264 nmdc:mga0n895_40745_c1 3300050512 Bacteria 4512
265 nmdc:mga08x19_561178_c1 3300050514 Bacteria 808
266 Ga0495601_0649752 3300053077 Bacteria 675
267 Ga0500643_024868 3300053087 Bacteria 1894
268 Ga0500646_0132852 3300053090 Bacteria 810
269 Ga0500592_045016 3300053116 Bacteria 715
270 Ga0500595_011800 3300053119 Bacteria 3403
271 Ga0500655_016767 3300053133 Bacteria 1350
272 Ga0500568_0025727 3300053139 Bacteria 2478
273 Ga0500577_0226763 3300053142 Bacteria 809
274 Ga0500619_008010 3300053154 Bacteria 2540
275 Ga0501082_0501781 3300060353 Bacteria 1061

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_1065569 Ga0501044_1065569_17_349 101
2 3300021384 Ga0213876_10529803 Ga0213876_105298032 102
3 3300039437 Ga0436365_0667602 Ga0436365_0667602_789_1196 102
4 3300005335 Ga0070666_10044851 Ga0070666_100448511 105
5 3300005339 Ga0070660_100017127 Ga0070660_1000171272 105
6 3300005530 Ga0070679_100031266 Ga0070679_1000312662 105
7 3300005548 Ga0070665_100054730 Ga0070665_1000547304 105
8 3300025272 Ga0209455_1037995 Ga0209455_10379952 105
9 3300025903 Ga0207680_10877434 Ga0207680_108774341 105
10 3300025921 Ga0207652_10030476 Ga0207652_100304766 105
11 3300028379 Ga0268266_10062183 Ga0268266_100621832 105
12 3300005338 Ga0068868_100176453 Ga0068868_1001764531 107
13 3300006237 Ga0097621_101066501 Ga0097621_1010665011 107
14 3300006358 Ga0068871_101440846 Ga0068871_1014408461 107
15 3300025261 Ga0209233_1000015 Ga0209233_1000015554 107
16 3300026023 Ga0207677_10249057 Ga0207677_102490572 107
17 3300053087 Ga0500643_024868 Ga0500643_024868_1414_1743 107
18 3300005365 Ga0070688_100767588 Ga0070688_1007675881 108
19 3300006237 Ga0097621_100160698 Ga0097621_1001606983 108
20 3300028577 Ga0265318_10350004 Ga0265318_103500041 108
21 3300031241 Ga0265325_10017336 Ga0265325_100173362 108
22 3300031250 Ga0265331_10297903 Ga0265331_102979031 108
23 3300031595 Ga0265313_10002574 Ga0265313_1000257410 108
24 3300031711 Ga0265314_10117642 Ga0265314_101176422 108
25 3300036401 Ga0373937_0251642 Ga0373937_0251642_518_898 108
26 3300046477 Ga0495664_0109509 Ga0495664_0109509_553_933 108
27 3300046529 Ga0495652_0232467 Ga0495652_0232467_673_1053 108
28 3300046543 Ga0495645_0024639 Ga0495645_0024639_259_639 108
29 3300046679 Ga0495623_0265233 Ga0495623_0265233_335_715 108
30 3300047444 Ga0495675_0050501 Ga0495675_0050501_2224_2604 108
31 3300049579 Ga0501043_0464565 Ga0501043_0464565_154_498 108
32 3300049580 Ga0501046_0378919 Ga0501046_0378919_578_922 108
33 3300049581 Ga0501047_0068145 Ga0501047_0068145_1368_1712 108
34 3300049823 Ga0501044_1068512 Ga0501044_1068512_184_528 108
35 3300053077 Ga0495601_0649752 Ga0495601_0649752_147_527 108
36 3300003214 JGI25165J46597_1000003 JGI25165J46597_1000003227 109
37 3300003214 JGI25165J46597_1043226 JGI25165J46597_10432261 109
38 3300003215 JGI25153J46596_10001292 JGI25153J46596_100012928 109
39 3300005578 Ga0068854_101198701 Ga0068854_1011987012 109
40 3300009093 Ga0105240_10167607 Ga0105240_101676072 109
41 3300013297 Ga0157378_10936535 Ga0157378_109365352 109
42 3300025261 Ga0209233_1001453 Ga0209233_100145315 109
43 3300025297 Ga0209758_1000008 Ga0209758_1000008972 109
44 3300025913 Ga0207695_10318523 Ga0207695_103185231 109
45 3300025920 Ga0207649_11342736 Ga0207649_113427361 109
46 3300025949 Ga0207667_11395809 Ga0207667_113958091 109
47 3300025981 Ga0207640_11152193 Ga0207640_111521932 109
48 3300028577 Ga0265318_10004108 Ga0265318_100041082 109
49 3300028800 Ga0265338_10230313 Ga0265338_102303132 109
50 3300031235 Ga0265330_10518747 Ga0265330_105187471 109
51 3300031240 Ga0265320_10000202 Ga0265320_1000020233 109
52 3300031241 Ga0265325_10002537 Ga0265325_1000253712 109
53 3300031249 Ga0265339_10293906 Ga0265339_102939061 109
54 3300031344 Ga0265316_10500370 Ga0265316_105003701 109
55 3300031711 Ga0265314_10012857 Ga0265314_1001285712 109
56 3300031711 Ga0265314_10290343 Ga0265314_102903432 109
57 3300031712 Ga0265342_10514599 Ga0265342_105145991 109
58 3300036401 Ga0373937_0622694 Ga0373937_0622694_162_521 109
59 3300049579 Ga0501043_0369012 Ga0501043_0369012_41_388 109
60 3300049581 Ga0501047_0022030 Ga0501047_0022030_5425_5772 109
61 3300049586 Ga0501070_0232221 Ga0501070_0232221_830_1177 109
62 3300049823 Ga0501044_1287072 Ga0501044_1287072_229_576 109
63 3300053142 Ga0500577_0226763 Ga0500577_0226763_320_658 109
64 3300005327 Ga0070658_10229447 Ga0070658_102294472 110
65 3300005337 Ga0070682_101170876 Ga0070682_1011708762 110
66 3300005344 Ga0070661_100028540 Ga0070661_1000285403 110
67 3300005356 Ga0070674_100324571 Ga0070674_1003245711 110
68 3300005356 Ga0070674_100561522 Ga0070674_1005615222 110
69 3300005436 Ga0070713_100777421 Ga0070713_1007774212 110
70 3300005436 Ga0070713_101266894 Ga0070713_1012668941 110
71 3300005456 Ga0070678_100014665 Ga0070678_1000146654 110
72 3300005456 Ga0070678_100612414 Ga0070678_1006124142 110
73 3300005530 Ga0070679_100388887 Ga0070679_1003888872 110
74 3300005539 Ga0068853_100033815 Ga0068853_1000338153 110
75 3300005543 Ga0070672_100293375 Ga0070672_1002933753 110
76 3300005548 Ga0070665_100146059 Ga0070665_1001460596 110
77 3300005548 Ga0070665_100203815 Ga0070665_1002038154 110
78 3300005548 Ga0070665_101476972 Ga0070665_1014769721 110
79 3300005563 Ga0068855_101762524 Ga0068855_1017625242 110
80 3300005719 Ga0068861_101556436 Ga0068861_1015564361 110
81 3300005834 Ga0068851_10068780 Ga0068851_100687803 110
82 3300005842 Ga0068858_100036008 Ga0068858_1000360082 110
83 3300006237 Ga0097621_100015523 Ga0097621_1000155238 110
84 3300006358 Ga0068871_100013505 Ga0068871_1000135059 110
85 3300006358 Ga0068871_100102832 Ga0068871_1001028325 110
86 3300006358 Ga0068871_100109570 Ga0068871_1001095705 110
87 3300006871 Ga0075434_100134747 Ga0075434_1001347474 110
88 3300006914 Ga0075436_100068807 Ga0075436_1000688075 110
89 3300009093 Ga0105240_10000444 Ga0105240_1000044429 110
90 3300009093 Ga0105240_10064287 Ga0105240_100642874 110
91 3300009101 Ga0105247_10061296 Ga0105247_100612963 110
92 3300009148 Ga0105243_10586939 Ga0105243_105869392 110
93 3300009148 Ga0105243_12918671 Ga0105243_129186711 110
94 3300009174 Ga0105241_10362119 Ga0105241_103621192 110
95 3300009174 Ga0105241_10365709 Ga0105241_103657093 110
96 3300009177 Ga0105248_11392744 Ga0105248_113927442 110
97 3300009545 Ga0105237_10239970 Ga0105237_102399703 110
98 3300009551 Ga0105238_10001458 Ga0105238_1000145828 110
99 3300009551 Ga0105238_10021981 Ga0105238_100219814 110
100 3300010375 Ga0105239_10013077 Ga0105239_100130775 110
101 3300010375 Ga0105239_10021339 Ga0105239_100213398 110
102 3300011119 Ga0105246_10213407 Ga0105246_102134072 110
103 3300013100 Ga0157373_11493957 Ga0157373_114939572 110
104 3300013105 Ga0157369_10002858 Ga0157369_100028589 110
105 3300013105 Ga0157369_10008356 Ga0157369_100083566 110
106 3300013297 Ga0157378_10021831 Ga0157378_100218313 110
107 3300013297 Ga0157378_10130250 Ga0157378_101302503 110
108 3300013306 Ga0163162_10979580 Ga0163162_109795802 110
109 3300013307 Ga0157372_10204052 Ga0157372_102040524 110
110 3300013307 Ga0157372_11844016 Ga0157372_118440162 110
111 3300014325 Ga0163163_12354923 Ga0163163_123549231 110
112 3300014968 Ga0157379_10027950 Ga0157379_100279508 110
113 3300014969 Ga0157376_11046721 Ga0157376_110467212 110
114 3300014969 Ga0157376_11140603 Ga0157376_111406032 110
115 3300025261 Ga0209233_1016047 Ga0209233_10160474 110
116 3300025321 Ga0207656_10245210 Ga0207656_102452101 110
117 3300025909 Ga0207705_10154939 Ga0207705_101549392 110
118 3300025911 Ga0207654_10218630 Ga0207654_102186302 110
119 3300025913 Ga0207695_10000004 Ga0207695_10000004542 110
120 3300025913 Ga0207695_10090445 Ga0207695_100904454 110
121 3300025913 Ga0207695_10612720 Ga0207695_106127202 110
122 3300025914 Ga0207671_10410186 Ga0207671_104101862 110
123 3300025914 Ga0207671_10504975 Ga0207671_105049752 110
124 3300025915 Ga0207693_10176732 Ga0207693_101767323 110
125 3300025920 Ga0207649_10031391 Ga0207649_100313913 110
126 3300025924 Ga0207694_10000049 Ga0207694_10000049142 110
127 3300025924 Ga0207694_10230450 Ga0207694_102304502 110
128 3300025929 Ga0207664_10996030 Ga0207664_109960302 110
129 3300025937 Ga0207669_10260337 Ga0207669_102603372 110
130 3300025940 Ga0207691_10364552 Ga0207691_103645522 110
131 3300025941 Ga0207711_11803626 Ga0207711_118036262 110
132 3300025944 Ga0207661_10208361 Ga0207661_102083612 110
133 3300025949 Ga0207667_10072019 Ga0207667_100720194 110
134 3300026035 Ga0207703_10025415 Ga0207703_100254154 110
135 3300026041 Ga0207639_10000300 Ga0207639_1000030038 110
136 3300026041 Ga0207639_10111100 Ga0207639_101111002 110
137 3300026041 Ga0207639_10591324 Ga0207639_105913242 110
138 3300026067 Ga0207678_10048333 Ga0207678_100483333 110
139 3300026078 Ga0207702_10167850 Ga0207702_101678504 110
140 3300026078 Ga0207702_11437573 Ga0207702_114375732 110
141 3300026078 Ga0207702_11460230 Ga0207702_114602302 110
142 3300026121 Ga0207683_10892619 Ga0207683_108926192 110
143 3300026121 Ga0207683_11133336 Ga0207683_111333361 110
144 3300026142 Ga0207698_10218298 Ga0207698_102182982 110
145 3300026142 Ga0207698_11137821 Ga0207698_111378212 110
146 3300028379 Ga0268266_10049671 Ga0268266_100496717 110
147 3300028379 Ga0268266_10115980 Ga0268266_101159806 110
148 3300028379 Ga0268266_12064830 Ga0268266_120648301 110
149 3300028573 Ga0265334_10015091 Ga0265334_100150912 110
150 3300028800 Ga0265338_10000007 Ga0265338_10000007502 110
151 3300028800 Ga0265338_10807490 Ga0265338_108074902 110
152 3300029957 Ga0265324_10128890 Ga0265324_101288902 110
153 3300031238 Ga0265332_10039230 Ga0265332_100392301 110
154 3300031238 Ga0265332_10089327 Ga0265332_100893271 110
155 3300031240 Ga0265320_10036072 Ga0265320_100360723 110
156 3300031241 Ga0265325_10000001 Ga0265325_10000001284 110
157 3300031241 Ga0265325_10003104 Ga0265325_1000310411 110
158 3300031242 Ga0265329_10019608 Ga0265329_100196082 110
159 3300031242 Ga0265329_10070347 Ga0265329_100703472 110
160 3300031249 Ga0265339_10000769 Ga0265339_1000076920 110
161 3300031249 Ga0265339_10007051 Ga0265339_100070519 110
162 3300031250 Ga0265331_10214632 Ga0265331_102146321 110
163 3300031344 Ga0265316_11148201 Ga0265316_111482011 110
164 3300031595 Ga0265313_10027692 Ga0265313_100276923 110
165 3300031595 Ga0265313_10028344 Ga0265313_100283445 110
166 3300031711 Ga0265314_10015067 Ga0265314_100150672 110
167 3300031711 Ga0265314_10029662 Ga0265314_100296623 110
168 3300031711 Ga0265314_10233267 Ga0265314_102332671 110
169 3300031712 Ga0265342_10135261 Ga0265342_101352612 110
170 3300031730 Ga0307516_10021204 Ga0307516_100212046 110
171 3300031730 Ga0307516_10060083 Ga0307516_100600832 110
172 3300035692 Ga0373935_0080841 Ga0373935_0080841_482_835 110
173 3300039447 Ga0436361_1130956 Ga0436361_1130956_51_386 110
174 3300039450 Ga0436363_0098309 Ga0436363_0098309_10743_11126 110
175 3300041463 Ga0451804_0198627 Ga0451804_0198627_38_394 110
176 3300045051 Ga0451576_0780404 Ga0451576_0780404_279_641 110
177 3300046454 Ga0495592_0899849 Ga0495592_0899849_70_453 110
178 3300046471 Ga0495650_0033604 Ga0495650_0033604_333_689 110
179 3300046519 Ga0495632_0306049 Ga0495632_0306049_171_524 110
180 3300046543 Ga0495645_0037033 Ga0495645_0037033_1549_1935 110
181 3300046557 Ga0495622_0023076 Ga0495622_0023076_734_1090 110
182 3300046648 Ga0495611_0166959 Ga0495611_0166959_351_704 110
183 3300047319 Ga0495674_0892515 Ga0495674_0892515_104_487 110
184 3300048903 Ga0496100_1642691 Ga0496100_1642691_43_396 110
185 3300048924 Ga0496121_0001729 Ga0496121_0001729_8727_9083 110
186 3300049570 Ga0501033_0071112 Ga0501033_0071112_1822_2181 110
187 3300049570 Ga0501033_0165452 Ga0501033_0165452_1007_1366 110
188 3300049574 Ga0501038_0068135 Ga0501038_0068135_1304_1663 110
189 3300049574 Ga0501038_0198123 Ga0501038_0198123_237_596 110
190 3300049581 Ga0501047_0069421 Ga0501047_0069421_2237_2623 110
191 3300049581 Ga0501047_0144191 Ga0501047_0144191_1112_1498 110
192 3300049581 Ga0501047_0514553 Ga0501047_0514553_338_706 110
193 3300049588 Ga0501072_1277286 Ga0501072_1277286_168_524 110
194 3300049741 Ga0501079_0628770 Ga0501079_0628770_249_635 110
195 3300049742 Ga0501080_0004780 Ga0501080_0004780_2004_2390 110
196 3300049742 Ga0501080_0267719 Ga0501080_0267719_908_1264 110
197 3300049744 Ga0501083_0069753 Ga0501083_0069753_273_629 110
198 3300049744 Ga0501083_0381735 Ga0501083_0381735_373_729 110
199 3300049822 Ga0501035_0028307 Ga0501035_0028307_3569_3928 110
200 3300049822 Ga0501035_0714072 Ga0501035_0714072_438_797 110
201 3300049823 Ga0501044_0137830 Ga0501044_0137830_1299_1658 110
202 3300049823 Ga0501044_1417084 Ga0501044_1417084_167_523 110
203 3300050512 nmdc:mga0n895_40745_c1 nmdc:mga0n895_40745_c1_1653_2015 110
204 3300050514 nmdc:mga08x19_561178_c1 nmdc:mga08x19_561178_c1_116_478 110
205 3300053090 Ga0500646_0132852 Ga0500646_0132852_20_376 110
206 3300053116 Ga0500592_045016 Ga0500592_045016_106_462 110
207 3300053119 Ga0500595_011800 Ga0500595_011800_2933_3289 110
208 3300053133 Ga0500655_016767 Ga0500655_016767_871_1254 110
209 3300053139 Ga0500568_0025727 Ga0500568_0025727_2075_2431 110
210 3300060353 Ga0501082_0501781 Ga0501082_0501781_33_389 110
211 3300005338 Ga0068868_100640108 Ga0068868_1006401082 111
212 3300005339 Ga0070660_101304696 Ga0070660_1013046962 111
213 3300005458 Ga0070681_10000010 Ga0070681_10000010150 111
214 3300005530 Ga0070679_100000194 Ga0070679_10000019412 111
215 3300005563 Ga0068855_101299510 Ga0068855_1012995101 111
216 3300005616 Ga0068852_100102527 Ga0068852_1001025275 111
217 3300009093 Ga0105240_10304754 Ga0105240_103047541 111
218 3300009174 Ga0105241_10058376 Ga0105241_100583763 111
219 3300009177 Ga0105248_10000001 Ga0105248_1000000193 111
220 3300009545 Ga0105237_10868325 Ga0105237_108683252 111
221 3300010375 Ga0105239_10081966 Ga0105239_100819662 111
222 3300021361 Ga0213872_10003190 Ga0213872_100031904 111
223 3300021361 Ga0213872_10021960 Ga0213872_100219602 111
224 3300021361 Ga0213872_10047673 Ga0213872_100476731 111
225 3300021361 Ga0213872_10085230 Ga0213872_100852303 111
226 3300021361 Ga0213872_10212351 Ga0213872_102123512 111
227 3300025907 Ga0207645_10116535 Ga0207645_101165354 111
228 3300025912 Ga0207707_10000005 Ga0207707_10000005150 111
229 3300025913 Ga0207695_10098682 Ga0207695_100986824 111
230 3300025917 Ga0207660_10004816 Ga0207660_100048165 111
231 3300025921 Ga0207652_10018494 Ga0207652_100184943 111
232 3300025941 Ga0207711_10000002 Ga0207711_10000002794 111
233 3300026142 Ga0207698_10081836 Ga0207698_100818365 111
234 3300028573 Ga0265334_10199865 Ga0265334_101998652 111
235 3300028577 Ga0265318_10201920 Ga0265318_102019202 111
236 3300028800 Ga0265338_10336322 Ga0265338_103363222 111
237 3300031240 Ga0265320_10110383 Ga0265320_101103833 111
238 3300031242 Ga0265329_10155934 Ga0265329_101559341 111
239 3300031247 Ga0265340_10373630 Ga0265340_103736301 111
240 3300031250 Ga0265331_10027053 Ga0265331_100270534 111
241 3300035114 Ga0373939_0025007 Ga0373939_0025007_1172_1555 111
242 3300039447 Ga0436361_0033289 Ga0436361_0033289_1580_1918 111
243 3300039447 Ga0436361_0209159 Ga0436361_0209159_2936_3274 111
244 3300039447 Ga0436361_0295484 Ga0436361_0295484_610_948 111
245 3300039447 Ga0436361_0357466 Ga0436361_0357466_2563_2901 111
246 3300039447 Ga0436361_0943985 Ga0436361_0943985_748_1086 111
247 3300046517 Ga0495630_0185420 Ga0495630_0185420_1053_1421 111
248 3300046794 Ga0495589_0071075 Ga0495589_0071075_299_667 111
249 3300048929 Ga0496126_0001133 Ga0496126_0001133_6784_7170 111
250 3300053154 Ga0500619_008010 Ga0500619_008010_696_1085 111
251 3300001989 JGI24739J22299_10000155 JGI24739J22299_1000015513 112
252 3300001990 JGI24737J22298_10000087 JGI24737J22298_1000008720 112
253 3300002075 JGI24738J21930_10001254 JGI24738J21930_100012545 112
254 3300005335 Ga0070666_10045833 Ga0070666_100458334 112
255 3300005335 Ga0070666_10306427 Ga0070666_103064272 112
256 3300005356 Ga0070674_100027851 Ga0070674_1000278515 112
257 3300005457 Ga0070662_100225602 Ga0070662_1002256022 112
258 3300005563 Ga0068855_100067162 Ga0068855_1000671626 112
259 3300005577 Ga0068857_100291242 Ga0068857_1002912422 112
260 3300009093 Ga0105240_10004603 Ga0105240_100046036 112
261 3300009148 Ga0105243_12109248 Ga0105243_121092481 112
262 3300025903 Ga0207680_10028398 Ga0207680_100283982 112
263 3300025903 Ga0207680_10039414 Ga0207680_100394142 112
264 3300025913 Ga0207695_10600448 Ga0207695_106004482 112
265 3300025914 Ga0207671_10044003 Ga0207671_100440032 112
266 3300025919 Ga0207657_10000989 Ga0207657_1000098925 112
267 3300025933 Ga0207706_10085045 Ga0207706_100850452 112
268 3300025935 Ga0207709_11307510 Ga0207709_113075101 112
269 3300025937 Ga0207669_10036598 Ga0207669_100365984 112
270 3300025949 Ga0207667_10145708 Ga0207667_101457082 112
271 3300026088 Ga0207641_10088345 Ga0207641_100883451 112
272 3300028800 Ga0265338_10006586 Ga0265338_1000658618 112
273 3300036401 Ga0373937_0438222 Ga0373937_0438222_652_1050 112
274 3300046543 Ga0495645_0257103 Ga0495645_0257103_702_1100 112
275 3300049742 Ga0501080_1255865 Ga0501080_1255865_190_549 112

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12840

HTH_20

Helix-turn-helix domain

13

65

0.96

PF01022

HTH_5

Bacterial regulatory protein, arsR family

15

64

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j05-assembly1.cif.gz_B structures of two arsr as(iii)-responsive repressors: implications for the mechanism of derepression 0.9462 1 87
8iuh-assembly1.cif.gz_P rna polymerase iii pre-initiation complex open complex 1 0.9367 21 76
6j05-assembly1.cif.gz_A structures of two arsr as(iii)-responsive repressors: implications for the mechanism of derepression 0.9239 1 95
2dk5-assembly1.cif.gz_A solution structure of winged-helix domain in rna polymerase iii 39kda polypeptide 0.9209 14 76
8cll-assembly1.cif.gz_F structural insights into human tfiiic promoter recognition 0.918 14 75
ID Description Score Start End Superfamily
af_P32910_88_152_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9663 17 76 1.10.10.10
af_Q9VD25_77_142_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9651 15 76 1.10.10.10
af_O94553_84_149_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9637 15 76 1.10.10.10
af_Q69XJ1_51_114_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9625 18 74 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9562 15 74 1.10.10.10
ID Description Score Start End GO Terms
AF-I9WSF8-F1-model_v4 deleted 0.9966 1 89
AF-A0A084U5I5-F1-model_v4 Regulatory protein ArsR 0.9952 1 91 GO:0003700
AF-K9H3S7-F1-model_v4 Transcriptional regulator, ArsR family 0.9948 1 90 GO:0003700
GO:0004726
GO:0030946
GO:0046685
GO:0140793
AF-A0A530K0I7-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9939 1 85 GO:0003700
AF-A0A1F3YRF7-F1-model_v4 Transcriptional regulator 0.993 1 87 GO:0003700

Feature Viewer

pLDDT pTM Quality
90.14 0.82 High
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Predicted Structure (AlphaFold2)

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