F380341

General Info

Members Datasets Scaffolds Average Seq Length
275 146 275 341

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100027116|Ga0075428_1000271163
Length 375
Sequence LLLVGLLTLSPAPFLLRASATAGQDTSQEQAPPTQTPDPATTAVDAAQPFQDWLNELLNEARGRGFSDALLQETLVGVEPLTRVIASDRSQAELNPGFARYASARLTRQRVTSGQELIRTNADLLERIEKTYGIQPRFLIAFWGLESNYGRLTGRVPVFQALATLAWEPRRASLFRSELFQALMMVDRGFIEAPTMTGSWAGAMGQPQFMPSSYMRYAVDFDGDSRRDIWKSTPDALASMANYLKGFGWNGNQTWGREVKVTPAALEKIVKRIPKRTDGCYAQRNMTERRPLAEWRELGVRQRDGSPLPNASLEAGLVDVGQRKFLVYPNYDAILSYNCAHYYALTVGLLGDALQATKGTKDGTTKITKGTKTAK

Samples

Sample ID Description Type Environment
1 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
107 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
120 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
121 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
144 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.73
Rhizosphere 99.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1003217 3300002076 Bacteria 2278
2 Ga0065712_10000369 3300005290 Bacteria 21661
3 Ga0065707_10020348 3300005295 Bacteria 1609
4 Ga0070676_10004435 3300005328 Bacteria 7382
5 Ga0070690_100009073 3300005330 Bacteria 5752
6 Ga0070670_100003089 3300005331 Bacteria 13772
7 Ga0070670_100008436 3300005331 Bacteria 8788
8 Ga0070670_100112499 3300005331 Bacteria 2346
9 Ga0070677_10026728 3300005333 Bacteria 2166
10 Ga0068869_100006975 3300005334 Bacteria 7191
11 Ga0068869_100035988 3300005334 Bacteria 3513
12 Ga0068869_100193737 3300005334 Bacteria 1600
13 Ga0070666_10006139 3300005335 Bacteria 7387
14 Ga0070680_100378358 3300005336 Bacteria 1205
15 Ga0068868_100190041 3300005338 Bacteria 1707
16 Ga0070689_100123423 3300005340 Bacteria 2070
17 Ga0070687_100055677 3300005343 Bacteria 2066
18 Ga0070661_100003109 3300005344 Bacteria 11423
19 Ga0070668_100191112 3300005347 Bacteria 1677
20 Ga0070669_100047896 3300005353 Bacteria 3119
21 Ga0070669_100112410 3300005353 Bacteria 2068
22 Ga0070669_100159179 3300005353 Bacteria 1753
23 Ga0070675_100033945 3300005354 Bacteria 4138
24 Ga0070675_100073728 3300005354 Bacteria 2834
25 Ga0070675_100123149 3300005354 Unclassified 2204
26 Ga0070675_100134617 3300005354 Bacteria 2108
27 Ga0070675_100135538 3300005354 Unclassified 2101
28 Ga0070671_100010352 3300005355 Bacteria 7482
29 Ga0070671_100068421 3300005355 Bacteria 2962
30 Ga0070674_100007297 3300005356 Bacteria 6511
31 Ga0070674_100112091 3300005356 Bacteria 2005
32 Ga0070673_100005823 3300005364 Bacteria 7942
33 Ga0070673_100011531 3300005364 Bacteria 6036
34 Ga0070673_100030608 3300005364 Bacteria 4031
35 Ga0070688_100208880 3300005365 Bacteria 1370
36 Ga0070701_10021771 3300005438 Bacteria 3065
37 Ga0070700_100016748 3300005441 Bacteria 4178
38 Ga0070694_100106237 3300005444 Bacteria 1993
39 Ga0070678_100088984 3300005456 Unclassified 2362
40 Ga0070662_100015837 3300005457 Bacteria 5057
41 Ga0070662_100119960 3300005457 Bacteria 2015
42 Ga0068867_100010033 3300005459 Bacteria 6675
43 Ga0070707_100111734 3300005468 Bacteria 2650
44 Ga0070672_100015322 3300005543 Bacteria 5456
45 Ga0070672_100045070 3300005543 Bacteria 3409
46 Ga0070672_100085961 3300005543 Bacteria 2528
47 Ga0070672_100165307 3300005543 Unclassified 1837
48 Ga0070686_100048239 3300005544 Bacteria 2697
49 Ga0070704_100008043 3300005549 Bacteria 6301
50 Ga0070704_100303106 3300005549 Bacteria 1332
51 Ga0070664_100006420 3300005564 Bacteria 9488
52 Ga0070664_100013646 3300005564 Bacteria 6621
53 Ga0068857_100070249 3300005577 Bacteria 3119
54 Ga0068857_100088829 3300005577 Bacteria 2765
55 Ga0068859_100036994 3300005617 Bacteria 4899
56 Ga0068859_100167833 3300005617 Bacteria 2275
57 Ga0068859_100215549 3300005617 Bacteria 2007
58 Ga0068864_100022831 3300005618 Bacteria 5247
59 Ga0068861_100017493 3300005719 Bacteria 5092
60 Ga0068861_100081517 3300005719 Bacteria 2533
61 Ga0068851_10021622 3300005834 Bacteria 3124
62 Ga0068870_10124964 3300005840 Bacteria 1486
63 Ga0068860_100027895 3300005843 Bacteria 5437
64 Ga0068860_100285228 3300005843 Bacteria 1614
65 Ga0068860_100296007 3300005843 Bacteria 1584
66 Ga0068871_100169347 3300006358 Bacteria 1871
67 Ga0068871_100325172 3300006358 Bacteria 1355
68 Ga0075428_100015583 3300006844 Bacteria 8428
69 Ga0075428_100018648 3300006844 Bacteria 7670
70 Ga0075428_100027116 3300006844 Bacteria 6342
71 Ga0075428_100056784 3300006844 Bacteria 4286
72 Ga0075430_100004003 3300006846 Bacteria 12427
73 Ga0075430_100021221 3300006846 Bacteria 5521
74 Ga0075430_100039773 3300006846 Bacteria 3980
75 Ga0075430_100051356 3300006846 Bacteria 3475
76 Ga0075431_100000760 3300006847 Bacteria 27921
77 Ga0075431_100013465 3300006847 Bacteria 8260
78 Ga0075431_100083691 3300006847 Bacteria 3294
79 Ga0075433_10001431 3300006852 Bacteria 17606
80 Ga0075433_10007790 3300006852 Bacteria 8513
81 Ga0075434_100008791 3300006871 Bacteria 9402
82 Ga0075434_100015998 3300006871 Bacteria 7208
83 Ga0075429_100006212 3300006880 Bacteria 10337
84 Ga0075429_100015599 3300006880 Bacteria 6584
85 Ga0075429_100023372 3300006880 Bacteria 5364
86 Ga0075429_100134815 3300006880 Bacteria 2161
87 Ga0075429_100149098 3300006880 Bacteria 2048
88 Ga0068865_100137592 3300006881 Bacteria 1837
89 Ga0097620_100036995 3300006931 Bacteria 4899
90 Ga0097620_100167815 3300006931 Bacteria 2275
91 Ga0097620_100215565 3300006931 Bacteria 2007
92 Ga0075435_100017382 3300007076 Bacteria 5443
93 Ga0111539_10000361 3300009094 Bacteria 55975
94 Ga0111539_10001404 3300009094 Bacteria 32079
95 Ga0111539_10001654 3300009094 Bacteria 29754
96 Ga0111539_10030240 3300009094 Bacteria 6585
97 Ga0111539_10045276 3300009094 Bacteria 5267
98 Ga0111539_10081954 3300009094 Bacteria 3794
99 Ga0111539_10503351 3300009094 Bacteria 1411
100 Ga0114129_10003847 3300009147 Bacteria 21166
101 Ga0114129_10010822 3300009147 Bacteria 12999
102 Ga0114129_10071485 3300009147 Bacteria 4838
103 Ga0114129_10163498 3300009147 Bacteria 3039
104 Ga0114129_10227546 3300009147 Bacteria 2513
105 Ga0114129_10354710 3300009147 Bacteria 1942
106 Ga0114129_10763954 3300009147 Bacteria 1236
107 Ga0105242_10330304 3300009176 Bacteria 1402
108 Ga0105248_10682005 3300009177 Bacteria 1159
109 Ga0105249_10038815 3300009553 Bacteria 4321
110 Ga0105246_10128916 3300011119 Bacteria 1886
111 Ga0157375_10258992 3300013308 Unclassified 1901
112 Ga0163163_10000013 3300014325 Bacteria 242522
113 Ga0163163_10027072 3300014325 Bacteria 5487
114 Ga0163163_10032663 3300014325 Bacteria 5029
115 Ga0157380_10001623 3300014326 Bacteria 14823
116 Ga0157380_10010488 3300014326 Bacteria 6666
117 Ga0157380_10030017 3300014326 Bacteria 4161
118 Ga0157380_10188468 3300014326 Bacteria 1819
119 Ga0157377_10011590 3300014745 Bacteria 4407
120 Ga0157376_10156192 3300014969 Bacteria 2063
121 Ga0163161_10351504 3300017792 Bacteria 1172
122 Ga0207697_10001643 3300025315 Bacteria 12097
123 Ga0207688_10092479 3300025901 Bacteria 1738
124 Ga0207680_10044458 3300025903 Bacteria 2612
125 Ga0207645_10018804 3300025907 Bacteria 4539
126 Ga0207645_10106517 3300025907 Bacteria 1812
127 Ga0207643_10013877 3300025908 Bacteria 4370
128 Ga0207662_10028532 3300025918 Bacteria 3227
129 Ga0207662_10093680 3300025918 Bacteria 1851
130 Ga0207662_10130198 3300025918 Bacteria 1586
131 Ga0207649_10014861 3300025920 Bacteria 4367
132 Ga0207649_10289180 3300025920 Bacteria 1194
133 Ga0207646_10355529 3300025922 Unclassified 1323
134 Ga0207681_10020762 3300025923 Bacteria 4167
135 Ga0207681_10157507 3300025923 Bacteria 1708
136 Ga0207694_10006369 3300025924 Bacteria 8998
137 Ga0207650_10008811 3300025925 Bacteria 6894
138 Ga0207650_10045731 3300025925 Bacteria 3221
139 Ga0207659_10003017 3300025926 Bacteria 10042
140 Ga0207659_10004349 3300025926 Bacteria 8563
141 Ga0207659_10005089 3300025926 Bacteria 7971
142 Ga0207659_10020444 3300025926 Bacteria 4377
143 Ga0207659_10026168 3300025926 Bacteria 3934
144 Ga0207659_10075859 3300025926 Bacteria 2469
145 Ga0207706_10000690 3300025933 Bacteria 35259
146 Ga0207706_10048429 3300025933 Bacteria 3758
147 Ga0207670_10027210 3300025936 Bacteria 3613
148 Ga0207670_10146833 3300025936 Bacteria 1745
149 Ga0207704_10032547 3300025938 Bacteria 2952
150 Ga0207691_10029805 3300025940 Bacteria 5103
151 Ga0207691_10049156 3300025940 Bacteria 3865
152 Ga0207691_10064668 3300025940 Bacteria 3313
153 Ga0207691_10066781 3300025940 Bacteria 3253
154 Ga0207689_10044070 3300025942 Bacteria 3688
155 Ga0207689_10086886 3300025942 Bacteria 2570
156 Ga0207679_10035008 3300025945 Bacteria 3549
157 Ga0207651_10020854 3300025960 Bacteria 3966
158 Ga0207651_10089899 3300025960 Bacteria 2243
159 Ga0207712_10011606 3300025961 Bacteria 5618
160 Ga0207668_10181416 3300025972 Bacteria 1661
161 Ga0207658_10077214 3300025986 Bacteria 2540
162 Ga0207677_10047338 3300026023 Bacteria 2886
163 Ga0207677_10101487 3300026023 Bacteria 2119
164 Ga0207703_10037269 3300026035 Bacteria 3873
165 Ga0207678_10074431 3300026067 Bacteria 2910
166 Ga0207708_10013749 3300026075 Bacteria 6048
167 Ga0207641_10173016 3300026088 Bacteria 1972
168 Ga0207648_10003268 3300026089 Bacteria 17044
169 Ga0207648_10291082 3300026089 Bacteria 1462
170 Ga0207674_10115416 3300026116 Bacteria 2657
171 Ga0207674_10156625 3300026116 Bacteria 2233
172 Ga0207675_100038732 3300026118 Bacteria 4448
173 Ga0207675_100040019 3300026118 Bacteria 4374
174 Ga0207683_10305349 3300026121 Unclassified 1456
175 Ga0207428_10003840 3300027907 Bacteria 14415
176 Ga0207428_10005931 3300027907 Bacteria 11311
177 Ga0207428_10007479 3300027907 Bacteria 9956
178 Ga0207428_10007930 3300027907 Bacteria 9649
179 Ga0207428_10097647 3300027907 Bacteria 2273
180 Ga0207428_10257697 3300027907 Bacteria 1299
181 Ga0268264_10023049 3300028381 Bacteria 5080
182 Ga0268264_10044041 3300028381 Bacteria 3701
183 Ga0268264_10184758 3300028381 Bacteria 1896
184 Ga0307408_100021169 3300031548 Bacteria 4398
185 Ga0307408_100050122 3300031548 Unclassified 3001
186 Ga0307408_100056808 3300031548 Bacteria 2839
187 Ga0307408_100110490 3300031548 Bacteria 2111
188 Ga0307405_10010009 3300031731 Bacteria 4890
189 Ga0307405_10011215 3300031731 Bacteria 4683
190 Ga0307413_10002306 3300031824 Bacteria 7728
191 Ga0307413_10034755 3300031824 Bacteria 2884
192 Ga0307410_10003563 3300031852 Bacteria 7841
193 Ga0307407_10001708 3300031903 Bacteria 8171
194 Ga0307407_10009442 3300031903 Bacteria 4545
195 Ga0307412_10008123 3300031911 Bacteria 5978
196 Ga0307409_100007134 3300031995 Bacteria 6656
197 Ga0307409_100012240 3300031995 Bacteria 5457
198 Ga0307416_100020016 3300032002 Bacteria 4762
199 Ga0307411_10022761 3300032005 Bacteria 3697
200 Ga0307411_10023023 3300032005 Bacteria 3681
201 Ga0307411_10275161 3300032005 Bacteria 1337
202 Ga0307415_100006845 3300032126 Bacteria 6184
203 Ga0373934_0093912 3300035086 Bacteria 1210
204 Ga0373949_0005344 3300035090 Bacteria 2868
205 Ga0373957_0005993 3300035120 Bacteria 3804
206 Ga0373955_0080195 3300035172 Bacteria 1843
207 Ga0373933_0296388 3300035724 Bacteria 1046
208 Ga0373937_0000790 3300036401 Bacteria 27115
209 Ga0450916_002251 3300042530 Bacteria 2030
210 Ga0451576_0027077 3300045051 Bacteria 6161
211 Ga0495603_0022038 3300046455 Bacteria 3858
212 Ga0495629_0038475 3300046459 Bacteria 3369
213 Ga0495651_0187150 3300046462 Bacteria 1460
214 Ga0495653_0124255 3300046463 Bacteria 1834
215 Ga0495594_0096344 3300046499 Bacteria 1662
216 Ga0495643_0005080 3300046522 Bacteria 9001
217 Ga0495643_0005253 3300046522 Bacteria 8801
218 Ga0495665_0030015 3300046531 Bacteria 2910
219 Ga0495598_0003691 3300046537 Bacteria 3271
220 Ga0495676_0068603 3300047321 Bacteria 2739
221 Ga0496110_0433988 3300048913 Bacteria 1197
222 Ga0496113_0033806 3300048916 Unclassified 3726
223 Ga0501031_0039123 3300049568 Bacteria 3094
224 Ga0501036_0174678 3300049572 Bacteria 1809
225 Ga0501039_0010916 3300049575 Bacteria 6922
226 Ga0501039_0345406 3300049575 Bacteria 1169
227 Ga0501041_0001385 3300049577 Bacteria 13421
228 Ga0501042_0011592 3300049578 Bacteria 5953
229 Ga0501072_0015355 3300049588 Bacteria 5873
230 Ga0501072_0018710 3300049588 Bacteria 5341
231 Ga0501075_0061426 3300049591 Bacteria 2832
232 Ga0501075_0201641 3300049591 Bacteria 1517
233 Ga0501080_0454601 3300049742 Bacteria 1148
234 Ga0501081_0021583 3300049743 Bacteria 4298
235 nmdc:mga05p37_155596_c2 3300050507 Bacteria 1519
236 nmdc:mga05p37_310461_c1 3300050507 Bacteria 1869
237 nmdc:mga05p37_339740_c1 3300050507 Bacteria 1771
238 nmdc:mga05p37_681092_c1 3300050507 Bacteria 1146
239 nmdc:mga05p37_68983_c1 3300050507 Bacteria 4348
240 nmdc:mga05p37_691416_c1 3300050507 Bacteria 1135
241 nmdc:mga09592_120334_c1 3300050508 Bacteria 2255
242 nmdc:mga09592_2578_c1 3300050508 Bacteria 14671
243 nmdc:mga09592_41153_c1 3300050508 Bacteria 3885
244 nmdc:mga09592_44040_c2 3300050508 Bacteria 2032
245 nmdc:mga0qj67_3673_c1 3300050509 Bacteria 11074
246 nmdc:mga0qj67_3703_c1 3300050509 Bacteria 11032
247 nmdc:mga0qj67_43828_c1 3300050509 Bacteria 3524
248 nmdc:mga06r32_188650_c1 3300050510 Bacteria 2049
249 nmdc:mga06r32_212621_c1 3300050510 Bacteria 1922
250 nmdc:mga06r32_5124_c1 3300050510 Bacteria 11787
251 nmdc:mga06r32_94105_c1 3300050510 Bacteria 2932
252 nmdc:mga08y16_19654_c1 3300050511 Bacteria 7123
253 nmdc:mga08y16_265700_c1 3300050511 Bacteria 1771
254 nmdc:mga08y16_31286_c1 3300050511 Bacteria 5598
255 nmdc:mga08y16_356644_c1 3300050511 Bacteria 1502
256 nmdc:mga08y16_40269_c1 3300050511 Bacteria 4899
257 nmdc:mga08y16_442_c1 3300050511 Bacteria 38335
258 nmdc:mga08y16_56772_c1 3300050511 Bacteria 4092
259 nmdc:mga08y16_58138_c1 3300050511 Bacteria 4040
260 nmdc:mga0n895_13286_c1 3300050512 Bacteria 7422
261 nmdc:mga0n895_38798_c1 3300050512 Bacteria 4617
262 nmdc:mga0n895_85726_c1 3300050512 Bacteria 3145
263 nmdc:mga0rr50_49227_c1 3300050513 Bacteria 3119
264 nmdc:mga0a205_16537_c1 3300050515 Bacteria 6910
265 nmdc:mga0a205_21099_c1 3300050515 Bacteria 6160
266 nmdc:mga0a205_32502_c1 3300050515 Bacteria 5003
267 Ga0501084_0056945 3300054114 Bacteria 3271
268 Ga0590071_000738 3300059421 Bacteria 9161
269 Ga0590075_000330 3300059424 Bacteria 13180
270 Ga0590077_001374 3300059426 Bacteria 5734
271 Ga0501082_0171202 3300060353 Bacteria 1888
272 Ga0501082_0199371 3300060353 Bacteria 1741
273 Ga0530510_0007809 3300061734 Bacteria 7459
274 Ga0530510_0022004 3300061734 Bacteria 4539
275 Ga0530510_0223013 3300061734 Bacteria 1401

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025925 Ga0207650_10045731 Ga0207650_100457313 298
2 3300009147 Ga0114129_10163498 Ga0114129_101634983 302
3 3300013308 Ga0157375_10258992 Ga0157375_102589923 302
4 3300050507 nmdc:mga05p37_691416_c1 nmdc:mga05p37_691416_c1_27_935 302
5 3300049575 Ga0501039_0010916 Ga0501039_0010916_5553_6500 310
6 3300049591 Ga0501075_0201641 Ga0501075_0201641_442_1389 310
7 3300049742 Ga0501080_0454601 Ga0501080_0454601_75_1022 310
8 3300049743 Ga0501081_0021583 Ga0501081_0021583_1233_2180 310
9 3300054114 Ga0501084_0056945 Ga0501084_0056945_128_1075 310
10 3300060353 Ga0501082_0171202 Ga0501082_0171202_860_1807 310
11 3300061734 Ga0530510_0007809 Ga0530510_0007809_4233_5180 310
12 3300031548 Ga0307408_100021169 Ga0307408_1000211692 313
13 3300031731 Ga0307405_10010009 Ga0307405_100100092 313
14 3300031824 Ga0307413_10002306 Ga0307413_100023063 313
15 3300031852 Ga0307410_10003563 Ga0307410_100035637 313
16 3300031903 Ga0307407_10009442 Ga0307407_100094423 313
17 3300031911 Ga0307412_10008123 Ga0307412_100081232 313
18 3300031995 Ga0307409_100012240 Ga0307409_1000122402 313
19 3300032002 Ga0307416_100020016 Ga0307416_1000200162 313
20 3300032005 Ga0307411_10022761 Ga0307411_100227613 313
21 3300032126 Ga0307415_100006845 Ga0307415_1000068452 313
22 3300005343 Ga0070687_100055677 Ga0070687_1000556771 315
23 3300005331 Ga0070670_100008436 Ga0070670_1000084364 316
24 3300005355 Ga0070671_100068421 Ga0070671_1000684212 316
25 3300005577 Ga0068857_100070249 Ga0068857_1000702492 316
26 3300005617 Ga0068859_100215549 Ga0068859_1002155492 316
27 3300006931 Ga0097620_100215565 Ga0097620_1002155652 316
28 3300035086 Ga0373934_0093912 Ga0373934_0093912_127_1080 316
29 3300035120 Ga0373957_0005993 Ga0373957_0005993_1479_2432 316
30 3300035172 Ga0373955_0080195 Ga0373955_0080195_121_1074 316
31 3300035724 Ga0373933_0296388 Ga0373933_0296388_59_1012 316
32 3300036401 Ga0373937_0000790 Ga0373937_0000790_24342_25295 316
33 3300046462 Ga0495651_0187150 Ga0495651_0187150_330_1283 316
34 3300027907 Ga0207428_10097647 Ga0207428_100976473 318
35 3300032005 Ga0307411_10275161 Ga0307411_102751612 319
36 3300005549 Ga0070704_100008043 Ga0070704_1000080432 320
37 3300006358 Ga0068871_100325172 Ga0068871_1003251721 320
38 3300005843 Ga0068860_100285228 Ga0068860_1002852281 321
39 3300014325 Ga0163163_10000013 Ga0163163_10000013144 321
40 3300045051 Ga0451576_0027077 Ga0451576_0027077_4424_5515 321
41 3300031548 Ga0307408_100056808 Ga0307408_1000568082 322
42 3300046522 Ga0495643_0005253 Ga0495643_0005253_98_1087 324
43 3300005549 Ga0070704_100303106 Ga0070704_1003031061 325
44 3300031548 Ga0307408_100050122 Ga0307408_1000501222 325
45 3300031731 Ga0307405_10011215 Ga0307405_100112153 325
46 3300031824 Ga0307413_10034755 Ga0307413_100347553 325
47 3300031903 Ga0307407_10001708 Ga0307407_100017086 325
48 3300005334 Ga0068869_100035988 Ga0068869_1000359883 326
49 3300005577 Ga0068857_100088829 Ga0068857_1000888293 326
50 3300005617 Ga0068859_100167833 Ga0068859_1001678333 326
51 3300006844 Ga0075428_100056784 Ga0075428_1000567842 326
52 3300006846 Ga0075430_100051356 Ga0075430_1000513564 326
53 3300006880 Ga0075429_100006212 Ga0075429_1000062127 326
54 3300006931 Ga0097620_100167815 Ga0097620_1001678153 326
55 3300009147 Ga0114129_10227546 Ga0114129_102275463 326
56 3300025942 Ga0207689_10086886 Ga0207689_100868863 326
57 3300026116 Ga0207674_10115416 Ga0207674_101154163 326
58 3300049588 Ga0501072_0018710 Ga0501072_0018710_2833_3834 326
59 3300050510 nmdc:mga06r32_212621_c1 nmdc:mga06r32_212621_c1_484_1485 326
60 3300005340 Ga0070689_100123423 Ga0070689_1001234232 329
61 3300025918 Ga0207662_10130198 Ga0207662_101301982 329
62 3300049591 Ga0501075_0061426 Ga0501075_0061426_800_1909 329
63 3300061734 Ga0530510_0223013 Ga0530510_0223013_168_1277 329
64 3300009147 Ga0114129_10003847 Ga0114129_1000384716 330
65 3300049575 Ga0501039_0345406 Ga0501039_0345406_18_1064 330
66 3300050507 nmdc:mga05p37_155596_c2 nmdc:mga05p37_155596_c2_402_1397 330
67 3300050511 nmdc:mga08y16_265700_c1 nmdc:mga08y16_265700_c1_703_1755 330
68 3300059421 Ga0590071_000738 Ga0590071_000738_1997_2998 330
69 3300059424 Ga0590075_000330 Ga0590075_000330_1035_2036 330
70 3300059426 Ga0590077_001374 Ga0590077_001374_4526_5527 330
71 3300005354 Ga0070675_100135538 Ga0070675_1001355382 332
72 3300046455 Ga0495603_0022038 Ga0495603_0022038_753_1757 332
73 3300046459 Ga0495629_0038475 Ga0495629_0038475_514_1518 332
74 3300046499 Ga0495594_0096344 Ga0495594_0096344_27_1031 332
75 3300047321 Ga0495676_0068603 Ga0495676_0068603_1170_2174 332
76 3300005330 Ga0070690_100009073 Ga0070690_1000090733 333
77 3300005334 Ga0068869_100006975 Ga0068869_1000069759 333
78 3300005334 Ga0068869_100193737 Ga0068869_1001937372 333
79 3300005353 Ga0070669_100047896 Ga0070669_1000478964 333
80 3300005353 Ga0070669_100159179 Ga0070669_1001591791 333
81 3300005354 Ga0070675_100033945 Ga0070675_1000339454 333
82 3300005354 Ga0070675_100123149 Ga0070675_1001231491 333
83 3300005355 Ga0070671_100010352 Ga0070671_1000103529 333
84 3300005356 Ga0070674_100007297 Ga0070674_1000072974 333
85 3300005364 Ga0070673_100030608 Ga0070673_1000306083 333
86 3300005438 Ga0070701_10021771 Ga0070701_100217713 333
87 3300005441 Ga0070700_100016748 Ga0070700_1000167483 333
88 3300005456 Ga0070678_100088984 Ga0070678_1000889843 333
89 3300005459 Ga0068867_100010033 Ga0068867_1000100337 333
90 3300005543 Ga0070672_100045070 Ga0070672_1000450701 333
91 3300005543 Ga0070672_100165307 Ga0070672_1001653072 333
92 3300005564 Ga0070664_100013646 Ga0070664_1000136468 333
93 3300005719 Ga0068861_100017493 Ga0068861_1000174931 333
94 3300005834 Ga0068851_10021622 Ga0068851_100216223 333
95 3300005843 Ga0068860_100027895 Ga0068860_1000278953 333
96 3300014325 Ga0163163_10032663 Ga0163163_100326633 333
97 3300014326 Ga0157380_10001623 Ga0157380_100016236 333
98 3300014326 Ga0157380_10030017 Ga0157380_100300174 333
99 3300017792 Ga0163161_10351504 Ga0163161_103515041 333
100 3300025907 Ga0207645_10018804 Ga0207645_100188043 333
101 3300025923 Ga0207681_10020762 Ga0207681_100207623 333
102 3300025923 Ga0207681_10157507 Ga0207681_101575071 333
103 3300025924 Ga0207694_10006369 Ga0207694_100063697 333
104 3300025926 Ga0207659_10075859 Ga0207659_100758592 333
105 3300025938 Ga0207704_10032547 Ga0207704_100325474 333
106 3300025940 Ga0207691_10029805 Ga0207691_100298056 333
107 3300025940 Ga0207691_10066781 Ga0207691_100667814 333
108 3300025942 Ga0207689_10044070 Ga0207689_100440702 333
109 3300025960 Ga0207651_10020854 Ga0207651_100208543 333
110 3300026023 Ga0207677_10101487 Ga0207677_101014871 333
111 3300026075 Ga0207708_10013749 Ga0207708_100137497 333
112 3300026089 Ga0207648_10003268 Ga0207648_1000326815 333
113 3300026118 Ga0207675_100038732 Ga0207675_1000387325 333
114 3300026121 Ga0207683_10305349 Ga0207683_103053491 333
115 3300028381 Ga0268264_10044041 Ga0268264_100440416 333
116 3300006852 Ga0075433_10001431 Ga0075433_100014316 334
117 3300032005 Ga0307411_10023023 Ga0307411_100230234 334
118 3300046522 Ga0495643_0005080 Ga0495643_0005080_916_1989 334
119 3300050512 nmdc:mga0n895_85726_c1 nmdc:mga0n895_85726_c1_1610_2695 334
120 3300050515 nmdc:mga0a205_16537_c1 nmdc:mga0a205_16537_c1_3011_4096 334
121 3300005468 Ga0070707_100111734 Ga0070707_1001117342 335
122 3300009147 Ga0114129_10010822 Ga0114129_100108225 335
123 3300009147 Ga0114129_10071485 Ga0114129_100714853 335
124 3300025922 Ga0207646_10355529 Ga0207646_103555292 335
125 3300046531 Ga0495665_0030015 Ga0495665_0030015_1661_2707 335
126 3300050507 nmdc:mga05p37_68983_c1 nmdc:mga05p37_68983_c1_1689_2723 335
127 3300005444 Ga0070694_100106237 Ga0070694_1001062373 336
128 3300006844 Ga0075428_100027116 Ga0075428_1000271163 336
129 3300006846 Ga0075430_100021221 Ga0075430_1000212214 336
130 3300006847 Ga0075431_100013465 Ga0075431_1000134653 336
131 3300009094 Ga0111539_10001654 Ga0111539_100016543 336
132 3300027907 Ga0207428_10007930 Ga0207428_100079304 336
133 3300031995 Ga0307409_100007134 Ga0307409_1000071342 336
134 3300035090 Ga0373949_0005344 Ga0373949_0005344_1122_2132 336
135 3300042530 Ga0450916_002251 Ga0450916_002251_10_1074 336
136 3300049568 Ga0501031_0039123 Ga0501031_0039123_1047_2135 336
137 3300049572 Ga0501036_0174678 Ga0501036_0174678_667_1755 336
138 3300049577 Ga0501041_0001385 Ga0501041_0001385_6813_7901 336
139 3300049578 Ga0501042_0011592 Ga0501042_0011592_1463_2551 336
140 3300049588 Ga0501072_0015355 Ga0501072_0015355_3654_4742 336
141 3300050508 nmdc:mga09592_44040_c2 nmdc:mga09592_44040_c2_527_1537 336
142 3300050509 nmdc:mga0qj67_3673_c1 nmdc:mga0qj67_3673_c1_8137_9285 336
143 3300050510 nmdc:mga06r32_188650_c1 nmdc:mga06r32_188650_c1_337_1485 336
144 3300050510 nmdc:mga06r32_94105_c1 nmdc:mga06r32_94105_c1_338_1426 336
145 3300050511 nmdc:mga08y16_19654_c1 nmdc:mga08y16_19654_c1_3046_4134 336
146 3300050511 nmdc:mga08y16_56772_c1 nmdc:mga08y16_56772_c1_1704_2714 336
147 3300050512 nmdc:mga0n895_13286_c1 nmdc:mga0n895_13286_c1_3590_4600 336
148 3300050515 nmdc:mga0a205_21099_c1 nmdc:mga0a205_21099_c1_2239_3249 336
149 3300060353 Ga0501082_0199371 Ga0501082_0199371_40_1128 336
150 3300061734 Ga0530510_0022004 Ga0530510_0022004_3227_4315 336
151 3300005290 Ga0065712_10000369 Ga0065712_1000036912 337
152 3300005295 Ga0065707_10020348 Ga0065707_100203482 337
153 3300005331 Ga0070670_100003089 Ga0070670_10000308911 337
154 3300005354 Ga0070675_100073728 Ga0070675_1000737282 337
155 3300005356 Ga0070674_100112091 Ga0070674_1001120911 337
156 3300005364 Ga0070673_100005823 Ga0070673_1000058232 337
157 3300005365 Ga0070688_100208880 Ga0070688_1002088801 337
158 3300005543 Ga0070672_100085961 Ga0070672_1000859612 337
159 3300005564 Ga0070664_100006420 Ga0070664_1000064205 337
160 3300005617 Ga0068859_100036994 Ga0068859_1000369942 337
161 3300006844 Ga0075428_100018648 Ga0075428_1000186484 337
162 3300006880 Ga0075429_100149098 Ga0075429_1001490982 337
163 3300006931 Ga0097620_100036995 Ga0097620_1000369952 337
164 3300009094 Ga0111539_10045276 Ga0111539_100452761 337
165 3300009094 Ga0111539_10503351 Ga0111539_105033511 337
166 3300009147 Ga0114129_10763954 Ga0114129_107639541 337
167 3300009177 Ga0105248_10682005 Ga0105248_106820051 337
168 3300014325 Ga0163163_10027072 Ga0163163_100270723 337
169 3300014745 Ga0157377_10011590 Ga0157377_100115903 337
170 3300025918 Ga0207662_10093680 Ga0207662_100936802 337
171 3300025920 Ga0207649_10289180 Ga0207649_102891801 337
172 3300025925 Ga0207650_10008811 Ga0207650_100088113 337
173 3300025926 Ga0207659_10003017 Ga0207659_100030175 337
174 3300025926 Ga0207659_10020444 Ga0207659_100204443 337
175 3300025926 Ga0207659_10026168 Ga0207659_100261683 337
176 3300025933 Ga0207706_10048429 Ga0207706_100484292 337
177 3300025936 Ga0207670_10027210 Ga0207670_100272103 337
178 3300025940 Ga0207691_10049156 Ga0207691_100491563 337
179 3300025960 Ga0207651_10089899 Ga0207651_100898994 337
180 3300026116 Ga0207674_10156625 Ga0207674_101566252 337
181 3300027907 Ga0207428_10257697 Ga0207428_102576971 337
182 3300028381 Ga0268264_10184758 Ga0268264_101847582 337
183 3300031548 Ga0307408_100110490 Ga0307408_1001104903 337
184 3300046537 Ga0495598_0003691 Ga0495598_0003691_14_1033 337
185 3300048913 Ga0496110_0433988 Ga0496110_0433988_36_1127 337
186 3300048916 Ga0496113_0033806 Ga0496113_0033806_64_1155 337
187 3300050507 nmdc:mga05p37_339740_c1 nmdc:mga05p37_339740_c1_17_1084 337
188 3300050507 nmdc:mga05p37_681092_c1 nmdc:mga05p37_681092_c1_111_1133 337
189 3300050508 nmdc:mga09592_120334_c1 nmdc:mga09592_120334_c1_603_1724 337
190 3300050511 nmdc:mga08y16_31286_c1 nmdc:mga08y16_31286_c1_196_1317 337
191 3300050511 nmdc:mga08y16_356644_c1 nmdc:mga08y16_356644_c1_121_1212 337
192 3300006844 Ga0075428_100015583 Ga0075428_1000155831 338
193 3300006846 Ga0075430_100004003 Ga0075430_1000040037 338
194 3300006847 Ga0075431_100000760 Ga0075431_1000007607 338
195 3300006880 Ga0075429_100015599 Ga0075429_1000155994 338
196 3300046463 Ga0495653_0124255 Ga0495653_0124255_186_1217 338
197 3300050508 nmdc:mga09592_2578_c1 nmdc:mga09592_2578_c1_7964_8980 338
198 3300050509 nmdc:mga0qj67_3703_c1 nmdc:mga0qj67_3703_c1_2683_3699 338
199 3300050510 nmdc:mga06r32_5124_c1 nmdc:mga06r32_5124_c1_6355_7371 338
200 3300005331 Ga0070670_100112499 Ga0070670_1001124991 339
201 3300005353 Ga0070669_100112410 Ga0070669_1001124102 339
202 3300005354 Ga0070675_100134617 Ga0070675_1001346171 339
203 3300005364 Ga0070673_100011531 Ga0070673_1000115312 339
204 3300005457 Ga0070662_100119960 Ga0070662_1001199603 339
205 3300005719 Ga0068861_100081517 Ga0068861_1000815173 339
206 3300005840 Ga0068870_10124964 Ga0068870_101249642 339
207 3300006846 Ga0075430_100039773 Ga0075430_1000397731 339
208 3300006847 Ga0075431_100083691 Ga0075431_1000836913 339
209 3300006880 Ga0075429_100023372 Ga0075429_1000233722 339
210 3300009094 Ga0111539_10000361 Ga0111539_1000036126 339
211 3300009094 Ga0111539_10001404 Ga0111539_1000140423 339
212 3300009176 Ga0105242_10330304 Ga0105242_103303041 339
213 3300025901 Ga0207688_10092479 Ga0207688_100924792 339
214 3300025907 Ga0207645_10106517 Ga0207645_101065172 339
215 3300025908 Ga0207643_10013877 Ga0207643_100138772 339
216 3300025926 Ga0207659_10005089 Ga0207659_100050893 339
217 3300026089 Ga0207648_10291082 Ga0207648_102910822 339
218 3300026118 Ga0207675_100040019 Ga0207675_1000400192 339
219 3300027907 Ga0207428_10003840 Ga0207428_100038405 339
220 3300027907 Ga0207428_10007479 Ga0207428_100074792 339
221 3300050508 nmdc:mga09592_41153_c1 nmdc:mga09592_41153_c1_2031_3089 339
222 3300050509 nmdc:mga0qj67_43828_c1 nmdc:mga0qj67_43828_c1_2376_3434 339
223 3300050511 nmdc:mga08y16_40269_c1 nmdc:mga08y16_40269_c1_2651_3694 339
224 3300050511 nmdc:mga08y16_442_c1 nmdc:mga08y16_442_c1_30731_31759 339
225 3300002076 JGI24749J21850_1003217 JGI24749J21850_10032172 340
226 3300005328 Ga0070676_10004435 Ga0070676_100044351 340
227 3300005333 Ga0070677_10026728 Ga0070677_100267283 340
228 3300005335 Ga0070666_10006139 Ga0070666_100061392 340
229 3300005336 Ga0070680_100378358 Ga0070680_1003783581 340
230 3300005338 Ga0068868_100190041 Ga0068868_1001900411 340
231 3300005344 Ga0070661_100003109 Ga0070661_1000031095 340
232 3300005347 Ga0070668_100191112 Ga0070668_1001911122 340
233 3300005457 Ga0070662_100015837 Ga0070662_1000158374 340
234 3300005543 Ga0070672_100015322 Ga0070672_1000153224 340
235 3300005544 Ga0070686_100048239 Ga0070686_1000482393 340
236 3300005618 Ga0068864_100022831 Ga0068864_1000228314 340
237 3300005843 Ga0068860_100296007 Ga0068860_1002960072 340
238 3300006358 Ga0068871_100169347 Ga0068871_1001693472 340
239 3300006852 Ga0075433_10007790 Ga0075433_100077903 340
240 3300006871 Ga0075434_100008791 Ga0075434_1000087913 340
241 3300006871 Ga0075434_100015998 Ga0075434_1000159985 340
242 3300006880 Ga0075429_100134815 Ga0075429_1001348152 340
243 3300006881 Ga0068865_100137592 Ga0068865_1001375922 340
244 3300007076 Ga0075435_100017382 Ga0075435_1000173822 340
245 3300009094 Ga0111539_10030240 Ga0111539_100302402 340
246 3300009094 Ga0111539_10081954 Ga0111539_100819542 340
247 3300009147 Ga0114129_10354710 Ga0114129_103547102 340
248 3300009553 Ga0105249_10038815 Ga0105249_100388153 340
249 3300011119 Ga0105246_10128916 Ga0105246_101289163 340
250 3300014326 Ga0157380_10010488 Ga0157380_100104883 340
251 3300014326 Ga0157380_10188468 Ga0157380_101884682 340
252 3300014969 Ga0157376_10156192 Ga0157376_101561922 340
253 3300025315 Ga0207697_10001643 Ga0207697_100016433 340
254 3300025903 Ga0207680_10044458 Ga0207680_100444583 340
255 3300025918 Ga0207662_10028532 Ga0207662_100285323 340
256 3300025920 Ga0207649_10014861 Ga0207649_100148611 340
257 3300025926 Ga0207659_10004349 Ga0207659_100043496 340
258 3300025933 Ga0207706_10000690 Ga0207706_1000069015 340
259 3300025936 Ga0207670_10146833 Ga0207670_101468332 340
260 3300025940 Ga0207691_10064668 Ga0207691_100646683 340
261 3300025945 Ga0207679_10035008 Ga0207679_100350083 340
262 3300025961 Ga0207712_10011606 Ga0207712_100116062 340
263 3300025972 Ga0207668_10181416 Ga0207668_101814161 340
264 3300025986 Ga0207658_10077214 Ga0207658_100772141 340
265 3300026023 Ga0207677_10047338 Ga0207677_100473383 340
266 3300026035 Ga0207703_10037269 Ga0207703_100372694 340
267 3300026067 Ga0207678_10074431 Ga0207678_100744311 340
268 3300026088 Ga0207641_10173016 Ga0207641_101730162 340
269 3300027907 Ga0207428_10005931 Ga0207428_100059313 340
270 3300028381 Ga0268264_10023049 Ga0268264_100230494 340
271 3300050507 nmdc:mga05p37_310461_c1 nmdc:mga05p37_310461_c1_352_1374 340
272 3300050511 nmdc:mga08y16_58138_c1 nmdc:mga08y16_58138_c1_2269_3300 340
273 3300050512 nmdc:mga0n895_38798_c1 nmdc:mga0n895_38798_c1_3280_4335 340
274 3300050513 nmdc:mga0rr50_49227_c1 nmdc:mga0rr50_49227_c1_231_1286 340
275 3300050515 nmdc:mga0a205_32502_c1 nmdc:mga0a205_32502_c1_248_1303 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13406

SLT_2

Transglycosylase SLT domain

49

352

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ao7-assembly1.cif.gz_A crystal structure of sltb3 from pseudomonas aeruginosa in complex with nag-anhnam-pentapeptide 0.9167 34 337
5ao8-assembly1.cif.gz_A crystal structure of sltb3 from pseudomonas aeruginosa in complex with nag-nam-pentapeptide 0.9139 34 337
7qvd-assembly1.cif.gz_AAA x-ray structure of the lytic transglycosylase sltb2 from pseudomonas aeruginosa 0.8908 35 340
5o8x-assembly2.cif.gz_B the x-ray structure of catenated lytic transglycosylase sltb1 from pseudomonas aeruginosa 0.8469 42 339
4anr-assembly1.cif.gz_A crystal structure of soluble lytic transglycosylase sltb1 from pseudomonas aeruginosa 0.8419 33 339
ID Description Score Start End Superfamily
af_P41052_109_361_1.10.530.10 Mainly Alpha;Orthogonal Bundle;Lysozyme; 0.858 83 339 1.10.530.10
af_P41052_109_361_1.10.530.10 Mainly Alpha;Orthogonal Bundle;Lysozyme; 0.8209 83 339 1.10.530.10
4anrA02 Mainly Alpha;Orthogonal Bundle;Lysozyme; 0.8185 77 339 1.10.530.10
af_O86313_126_277_3.90.550.50 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A; 0.8073 189 337 3.90.550.50
1ltmA02 Mainly Alpha;Orthogonal Bundle;Lysozyme; 0.7977 83 339 1.10.530.10
ID Description Score Start End GO Terms
AF-A0A2V8EHG0-F1-model_v4 Lytic murein transglycosylase 0.9887 215 339 GO:0008933
GO:0009253
AF-A0A7Y4WTJ7-F1-model_v4 Lytic murein transglycosylase 0.9504 21 340 GO:0008933
GO:0009253
AF-A0A2E5DS41-F1-model_v4 Lytic transglycosylase 0.9346 33 339 GO:0008933
GO:0009253
AF-A0A3B9X6U2-F1-model_v4 Lytic murein transglycosylase 0.9325 35 340 GO:0008933
GO:0009253
AF-A0A2E3K658-F1-model_v4 Lytic transglycosylase 0.9321 35 340 GO:0008933
GO:0009253

Feature Viewer

pLDDT pTM Quality
85.86 0.83 High
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Predicted Structure (AlphaFold2)

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