F380177

General Info

Members Datasets Scaffolds Average Seq Length
275 171 550 295

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100047016|Ga0070690_1000470161
Length 310
Sequence MTLPNSTRRGLRRGLAGALLLASLASFSTTGARADGAAVWSMRGEHNTVYLAGSVHALPRDHAELSPQLELAYEAADVIVMEVDLDDLNPLEAVEFLTSHGTLPEGQTLATVIGAKHYAAIVRLAGSLDLPELAISRLEPWAAAMVLTQFALMKSGYDPQLGVDMQLSERARVDHKPIDGLETVVEQLGIFDARSIGEQSKFLIDSARDVPKMQQDLDRLITAWRKGDLRGMEREFAKERAQAPALYDELLGARNRRWLPKIEALLDSDRNYLVLVGTLHFVGHDGLLELLTRAGHKPVALSAGAPAAAR

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
122 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
123 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
124 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
125 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
126 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
129 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
166 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
167 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
168 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 1.09
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.73
Nodule 0
Rhizoplane 7.27
Rhizosphere 89.45
Stem 0
Stem Tuber 0
Unclassified 19.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100047016 3300005330 Unclassified 2745
2 rootH1_10139370 3300003323 Bacteria 1061
3 Ga0070676_10031529 3300005328 Unclassified 3030
4 Ga0070676_10159655 3300005328 Bacteria 1450
5 Ga0070690_100033630 3300005330 Bacteria 3211
6 Ga0070670_100001352 3300005331 Bacteria 19635
7 Ga0070670_100204812 3300005331 Unclassified 1715
8 Ga0070677_10002035 3300005333 Bacteria 6432
9 Ga0070677_10008988 3300005333 Bacteria 3379
10 Ga0068869_100204806 3300005334 Bacteria 1557
11 Ga0068869_100486994 3300005334 Unclassified 1028
12 Ga0070666_10010265 3300005335 Bacteria 5854
13 Ga0070682_100004379 3300005337 Bacteria 7838
14 Ga0070682_100005091 3300005337 Bacteria 7305
15 Ga0070682_100048289 3300005337 Unclassified 2650
16 Ga0070682_100094368 3300005337 Unclassified 1963
17 Ga0068868_100014767 3300005338 Bacteria 5763
18 Ga0070689_100054101 3300005340 Bacteria 3107
19 Ga0070687_100027243 3300005343 Bacteria 2759
20 Ga0070661_100106357 3300005344 Bacteria 2092
21 Ga0070675_100069334 3300005354 Bacteria 2921
22 Ga0070675_100080136 3300005354 Bacteria 2721
23 Ga0070675_100458116 3300005354 Unclassified 1144
24 Ga0070671_100007675 3300005355 Bacteria 8624
25 Ga0070674_100056680 3300005356 Unclassified 2717
26 Ga0070673_100192283 3300005364 Unclassified 1753
27 Ga0070673_100217370 3300005364 Bacteria 1653
28 Ga0070688_100111783 3300005365 Bacteria 1818
29 Ga0070667_100017356 3300005367 Bacteria 5964
30 Ga0070667_100101055 3300005367 Unclassified 2491
31 Ga0070667_100203639 3300005367 Bacteria 1757
32 Ga0070710_10158397 3300005437 Bacteria 1402
33 Ga0070701_10044352 3300005438 Bacteria 2278
34 Ga0070711_100080125 3300005439 Bacteria 2324
35 Ga0070711_100089118 3300005439 Bacteria 2218
36 Ga0070705_100020206 3300005440 Bacteria 3519
37 Ga0070700_100084062 3300005441 Bacteria 2062
38 Ga0070700_100304458 3300005441 Unclassified 1165
39 Ga0070663_100184354 3300005455 Bacteria 1621
40 Ga0070678_100046696 3300005456 Bacteria 3107
41 Ga0070678_100049488 3300005456 Bacteria 3034
42 Ga0068867_100168766 3300005459 Bacteria 1731
43 Ga0070685_10027610 3300005466 Bacteria 3139
44 Ga0070685_10168594 3300005466 Unclassified 1402
45 Ga0070684_100020706 3300005535 Bacteria 5457
46 Ga0070672_100003574 3300005543 Bacteria 10069
47 Ga0070672_100043123 3300005543 Bacteria 3477
48 Ga0070672_100070194 3300005543 Unclassified 2783
49 Ga0070686_100008862 3300005544 Bacteria 5637
50 Ga0070686_100050046 3300005544 Unclassified 2654
51 Ga0070686_100067921 3300005544 Bacteria 2324
52 Ga0070686_100194560 3300005544 Bacteria 1449
53 Ga0070696_100000147 3300005546 Bacteria 39206
54 Ga0070693_100026159 3300005547 Bacteria 3149
55 Ga0070665_100724402 3300005548 Unclassified 1008
56 Ga0068855_100238878 3300005563 Bacteria 2031
57 Ga0070664_100003023 3300005564 Bacteria 13599
58 Ga0070664_100005925 3300005564 Bacteria 9872
59 Ga0070702_100023559 3300005615 Unclassified 3273
60 Ga0070702_100139562 3300005615 Bacteria 1542
61 Ga0068859_100019062 3300005617 Bacteria 6889
62 Ga0068859_100023257 3300005617 Bacteria 6219
63 Ga0068859_100261744 3300005617 Bacteria 1821
64 Ga0068859_100339833 3300005617 Bacteria 1596
65 Ga0068864_100013624 3300005618 Bacteria 6740
66 Ga0068864_100062474 3300005618 Unclassified 3227
67 Ga0068861_100003578 3300005719 Bacteria 10344
68 Ga0068861_100015368 3300005719 Bacteria 5392
69 Ga0068861_100061766 3300005719 Bacteria 2876
70 Ga0068861_100100515 3300005719 Bacteria 2299
71 Ga0068861_100111025 3300005719 Bacteria 2197
72 Ga0068851_10090844 3300005834 Bacteria 1607
73 Ga0068870_10019338 3300005840 Bacteria 3303
74 Ga0068870_10081785 3300005840 Bacteria 1787
75 Ga0068863_100003833 3300005841 Bacteria 14869
76 Ga0068863_100045047 3300005841 Bacteria 4186
77 Ga0068863_100269473 3300005841 Bacteria 1648
78 Ga0068863_100327244 3300005841 Bacteria 1489
79 Ga0068858_100013890 3300005842 Bacteria 7595
80 Ga0068860_100064434 3300005843 Bacteria 3481
81 Ga0068862_100069731 3300005844 Bacteria 3035
82 Ga0068862_100170078 3300005844 Bacteria 1951
83 Ga0068862_100318502 3300005844 Unclassified 1435
84 Ga0081455_10002185 3300005937 Bacteria 23311
85 Ga0070716_100081948 3300006173 Unclassified 1928
86 Ga0070716_100269950 3300006173 Bacteria 1168
87 Ga0097621_100020458 3300006237 Bacteria 5099
88 Ga0097621_100053844 3300006237 Bacteria 3280
89 Ga0097621_100054738 3300006237 Bacteria 3255
90 Ga0068871_100044079 3300006358 Bacteria 3585
91 Ga0068871_100069860 3300006358 Bacteria 2885
92 Ga0068871_100080839 3300006358 Bacteria 2691
93 Ga0068871_100283880 3300006358 Bacteria 1449
94 Ga0068865_100007963 3300006881 Bacteria 6542
95 Ga0068865_100539756 3300006881 Bacteria 978
96 Ga0097620_100019061 3300006931 Bacteria 6889
97 Ga0097620_100023258 3300006931 Bacteria 6219
98 Ga0097620_100261775 3300006931 Bacteria 1821
99 Ga0097620_100339835 3300006931 Bacteria 1596
100 Ga0099794_10055845 3300007265 Unclassified 1909
101 Ga0105240_10135965 3300009093 Bacteria 2944
102 Ga0105240_10184293 3300009093 Bacteria 2460
103 Ga0111539_10061770 3300009094 Bacteria 4438
104 Ga0105245_10006080 3300009098 Bacteria 10610
105 Ga0105243_10313731 3300009148 Bacteria 1426
106 Ga0105242_10009958 3300009176 Bacteria 7279
107 Ga0105248_10017120 3300009177 Bacteria 7985
108 Ga0105248_10265020 3300009177 Unclassified 1934
109 Ga0105249_10101606 3300009553 Unclassified 2704
110 Ga0099796_10019208 3300010159 Unclassified 2068
111 Ga0105239_10083401 3300010375 Bacteria 3520
112 Ga0105246_10010428 3300011119 Bacteria 5750
113 Ga0157374_10002134 3300013296 Bacteria 16665
114 Ga0163162_10004989 3300013306 Bacteria 12790
115 Ga0163162_10033031 3300013306 Bacteria 5140
116 Ga0157375_10034101 3300013308 Bacteria 4845
117 Ga0163163_10657257 3300014325 Bacteria 1112
118 Ga0157380_10004746 3300014326 Bacteria 9462
119 Ga0157380_10047139 3300014326 Bacteria 3388
120 Ga0157380_10061824 3300014326 Bacteria 2998
121 Ga0157380_10080634 3300014326 Bacteria 2660
122 Ga0157380_10114875 3300014326 Unclassified 2269
123 Ga0157380_10239715 3300014326 Unclassified 1634
124 Ga0157380_10395042 3300014326 Bacteria 1310
125 Ga0157379_10029280 3300014968 Bacteria 4897
126 Ga0157379_10118352 3300014968 Unclassified 2383
127 Ga0157376_10029486 3300014969 Bacteria 4371
128 Ga0157376_10036837 3300014969 Bacteria 3965
129 Ga0157376_10046375 3300014969 Bacteria 3584
130 Ga0163161_10356820 3300017792 Bacteria 1163
131 Ga0207697_10015523 3300025315 Unclassified 3146
132 Ga0207656_10090166 3300025321 Bacteria 1391
133 Ga0207682_10003850 3300025893 Bacteria 6439
134 Ga0207682_10006301 3300025893 Bacteria 4789
135 Ga0207680_10008777 3300025903 Bacteria 4980
136 Ga0207645_10058168 3300025907 Unclassified 2468
137 Ga0207643_10059297 3300025908 Unclassified 2183
138 Ga0207643_10086930 3300025908 Bacteria 1817
139 Ga0207643_10198086 3300025908 Bacteria 1222
140 Ga0207695_10117870 3300025913 Bacteria 2627
141 Ga0207662_10103640 3300025918 Unclassified 1766
142 Ga0207649_10070927 3300025920 Bacteria 2223
143 Ga0207681_10043911 3300025923 Unclassified 2993
144 Ga0207650_10011492 3300025925 Bacteria 6094
145 Ga0207650_10115457 3300025925 Unclassified 2084
146 Ga0207659_10178671 3300025926 Bacteria 1680
147 Ga0207670_10032774 3300025936 Bacteria 3343
148 Ga0207669_10053020 3300025937 Unclassified 2440
149 Ga0207665_10108636 3300025939 Unclassified 1946
150 Ga0207691_10017953 3300025940 Bacteria 6702
151 Ga0207691_10026787 3300025940 Bacteria 5410
152 Ga0207691_10053079 3300025940 Unclassified 3702
153 Ga0207691_10139128 3300025940 Bacteria 2140
154 Ga0207711_10027605 3300025941 Bacteria 4769
155 Ga0207689_10065015 3300025942 Bacteria 3001
156 Ga0207689_10261482 3300025942 Unclassified 1432
157 Ga0207689_10298818 3300025942 Bacteria 1334
158 Ga0207679_10015027 3300025945 Bacteria 5103
159 Ga0207679_10136570 3300025945 Unclassified 1975
160 Ga0207667_10124714 3300025949 Bacteria 2653
161 Ga0207651_10023729 3300025960 Bacteria 3780
162 Ga0207651_10036596 3300025960 Unclassified 3206
163 Ga0207651_10040607 3300025960 Unclassified 3080
164 Ga0207651_10088733 3300025960 Bacteria 2255
165 Ga0207658_10011891 3300025986 Bacteria 5933
166 Ga0207677_10106697 3300026023 Bacteria 2076
167 Ga0207703_10033000 3300026035 Bacteria 4101
168 Ga0207703_10038704 3300026035 Bacteria 3808
169 Ga0207708_10013052 3300026075 Bacteria 6199
170 Ga0207708_10018757 3300026075 Bacteria 5212
171 Ga0207708_10181684 3300026075 Bacteria 1670
172 Ga0207641_10008188 3300026088 Bacteria 8643
173 Ga0207641_10458271 3300026088 Unclassified 1233
174 Ga0207648_10038934 3300026089 Bacteria 4182
175 Ga0207648_10055429 3300026089 Bacteria 3460
176 Ga0207676_10017807 3300026095 Bacteria 5154
177 Ga0207676_10074185 3300026095 Unclassified 2740
178 Ga0207675_100003109 3300026118 Bacteria 16277
179 Ga0207675_100041294 3300026118 Bacteria 4308
180 Ga0207675_100058627 3300026118 Bacteria 3593
181 Ga0207675_100086915 3300026118 Bacteria 2936
182 Ga0207675_100110428 3300026118 Bacteria 2594
183 Ga0207675_100121017 3300026118 Bacteria 2476
184 Ga0207683_10033725 3300026121 Unclassified 4448
185 Ga0268266_10060704 3300028379 Bacteria 3259
186 Ga0268266_10134051 3300028379 Bacteria 2217
187 Ga0268265_10035936 3300028380 Bacteria 3625
188 Ga0268265_10302869 3300028380 Unclassified 1440
189 Ga0268265_10409208 3300028380 Bacteria 1256
190 Ga0268264_10167463 3300028381 Unclassified 1985
191 Ga0265762_1018187 3300030760 Unclassified 1282
192 Ga0265770_1000096 3300030878 Bacteria 10081
193 Ga0265760_10002181 3300031090 Bacteria 5730
194 Ga0307513_10016972 3300031456 Bacteria 8746
195 Ga0307513_10019257 3300031456 Bacteria 8130
196 Ga0307513_10032931 3300031456 Bacteria 5835
197 Ga0307509_10043907 3300031507 Bacteria 4832
198 Ga0307509_10152335 3300031507 Bacteria 2225
199 Ga0307413_10001382 3300031824 Bacteria 9127
200 Ga0307407_10023668 3300031903 Bacteria 3207
201 Ga0307412_10382509 3300031911 Unclassified 1140
202 Ga0307409_100019564 3300031995 Bacteria 4589
203 Ga0307409_100022288 3300031995 Bacteria 4363
204 Ga0307409_100129638 3300031995 Bacteria 2152
205 Ga0307409_100418787 3300031995 Unclassified 1284
206 Ga0307416_100013689 3300032002 Bacteria 5523
207 Ga0307416_100065695 3300032002 Bacteria 2983
208 Ga0307411_10001583 3300032005 Bacteria 9439
209 Ga0307411_10184050 3300032005 Bacteria 1588
210 Ga0307415_100058974 3300032126 Bacteria 2645
211 Ga0373945_0068733 3300035116 Unclassified 1337
212 Ga0373955_0015222 3300035172 Bacteria 3760
213 Ga0373955_0093375 3300035172 Unclassified 1718
214 Ga0373924_0047808 3300035410 Bacteria 1766
215 Ga0373933_0053507 3300035724 Unclassified 2418
216 Ga0373937_0002689 3300036401 Bacteria 14838
217 Ga0373937_0167737 3300036401 Bacteria 2059
218 Ga0451789_0907434 3300041443 Bacteria 2126
219 Ga0451793_1762667 3300041452 Unclassified 2876
220 Ga0451797_0904503 3300041453 Bacteria 1357
221 Ga0451802_0646508 3300041460 Unclassified 1728
222 Ga0451802_1310124 3300041460 Bacteria 1619
223 Ga0451802_1713735 3300041460 Bacteria 1290
224 Ga0451807_2472844 3300041486 Bacteria 1191
225 Ga0451837_1304677 3300041494 Unclassified 1812
226 Ga0451576_0205497 3300045051 Bacteria 2056
227 Ga0495603_0042642 3300046455 Unclassified 2712
228 Ga0495590_0063948 3300046457 Bacteria 1287
229 Ga0495590_0097749 3300046457 Bacteria 1042
230 Ga0495638_0004724 3300046460 Bacteria 10292
231 Ga0495638_0014803 3300046460 Bacteria 5259
232 Ga0495585_0031934 3300046492 Archaea 2986
233 Ga0495616_0000449 3300046513 Bacteria 31380
234 Ga0495630_0207598 3300046517 Bacteria 1495
235 Ga0495632_0037874 3300046519 Bacteria 2444
236 Ga0495648_0097731 3300046524 Bacteria 1628
237 Ga0495645_0092915 3300046543 Bacteria 2154
238 Ga0495625_0013467 3300046660 Bacteria 6572
239 Ga0495625_0079661 3300046660 Bacteria 2283
240 Ga0495649_0022065 3300046694 Bacteria 3565
241 Ga0495686_0057911 3300047472 Bacteria 2417
242 Ga0496101_0248297 3300048904 Bacteria 1386
243 Ga0496102_0351548 3300048905 Bacteria 1388
244 Ga0496103_0252555 3300048906 Bacteria 1135
245 Ga0496104_0121870 3300048907 Bacteria 2504
246 Ga0496105_0002604 3300048908 Bacteria 13127
247 Ga0496108_0032696 3300048911 Bacteria 4321
248 Ga0496109_0030082 3300048912 Bacteria 4867
249 Ga0496110_0914819 3300048913 Bacteria 783
250 Ga0496112_0018332 3300048915 Bacteria 6589
251 Ga0496114_0001840 3300048917 Bacteria 16065
252 Ga0496114_0002185 3300048917 Bacteria 14896
253 Ga0496115_0001174 3300048918 Bacteria 18773
254 Ga0496115_0023450 3300048918 Bacteria 4790
255 Ga0495678_065322 3300049459 Bacteria 1351
256 Ga0501067_0057880 3300049583 Bacteria 2146
257 Ga0501068_0001882 3300049584 Bacteria 11167
258 Ga0501069_0031254 3300049585 Bacteria 2927
259 Ga0501070_0045715 3300049586 Bacteria 3641
260 Ga0501071_0005307 3300049587 Bacteria 8268
261 Ga0501073_0011828 3300049589 Bacteria 6369
262 Ga0501074_0006639 3300049590 Bacteria 8361
263 Ga0501075_0164800 3300049591 Bacteria 1691
264 Ga0501076_0007251 3300049592 Bacteria 8065
265 Ga0501079_0002367 3300049741 Bacteria 13698
266 Ga0501080_0009517 3300049742 Bacteria 8866
267 Ga0501081_0144796 3300049743 Bacteria 1704
268 Ga0501083_0029128 3300049744 Bacteria 3801
269 Ga0495601_0017637 3300053077 Bacteria 4336
270 Ga0495595_0088827 3300053084 Bacteria 1481
271 Ga0500628_022450 3300053129 Bacteria 1291
272 Ga0500611_007301 3300053727 Bacteria 1654
273 Ga0501084_0007292 3300054114 Bacteria 9112
274 Ga0501082_0020621 3300060353 Bacteria 5681
275 Ga0530510_0080480 3300061734 Bacteria 2371
276 Ga0070690_100047016
277 rootH1_10139370
278 Ga0070676_10031529
279 Ga0070676_10159655
280 Ga0070690_100033630
281 Ga0070670_100001352
282 Ga0070670_100204812
283 Ga0070677_10002035
284 Ga0070677_10008988
285 Ga0068869_100204806
286 Ga0068869_100486994
287 Ga0070666_10010265
288 Ga0070682_100004379
289 Ga0070682_100005091
290 Ga0070682_100048289
291 Ga0070682_100094368
292 Ga0068868_100014767
293 Ga0070689_100054101
294 Ga0070687_100027243
295 Ga0070661_100106357
296 Ga0070675_100069334
297 Ga0070675_100080136
298 Ga0070675_100458116
299 Ga0070671_100007675
300 Ga0070674_100056680
301 Ga0070673_100192283
302 Ga0070673_100217370
303 Ga0070688_100111783
304 Ga0070667_100017356
305 Ga0070667_100101055
306 Ga0070667_100203639
307 Ga0070710_10158397
308 Ga0070701_10044352
309 Ga0070711_100080125
310 Ga0070711_100089118
311 Ga0070705_100020206
312 Ga0070700_100084062
313 Ga0070700_100304458
314 Ga0070663_100184354
315 Ga0070678_100046696
316 Ga0070678_100049488
317 Ga0068867_100168766
318 Ga0070685_10027610
319 Ga0070685_10168594
320 Ga0070684_100020706
321 Ga0070672_100003574
322 Ga0070672_100043123
323 Ga0070672_100070194
324 Ga0070686_100008862
325 Ga0070686_100050046
326 Ga0070686_100067921
327 Ga0070686_100194560
328 Ga0070696_100000147
329 Ga0070693_100026159
330 Ga0070665_100724402
331 Ga0068855_100238878
332 Ga0070664_100003023
333 Ga0070664_100005925
334 Ga0070702_100023559
335 Ga0070702_100139562
336 Ga0068859_100019062
337 Ga0068859_100023257
338 Ga0068859_100261744
339 Ga0068859_100339833
340 Ga0068864_100013624
341 Ga0068864_100062474
342 Ga0068861_100003578
343 Ga0068861_100015368
344 Ga0068861_100061766
345 Ga0068861_100100515
346 Ga0068861_100111025
347 Ga0068851_10090844
348 Ga0068870_10019338
349 Ga0068870_10081785
350 Ga0068863_100003833
351 Ga0068863_100045047
352 Ga0068863_100269473
353 Ga0068863_100327244
354 Ga0068858_100013890
355 Ga0068860_100064434
356 Ga0068862_100069731
357 Ga0068862_100170078
358 Ga0068862_100318502
359 Ga0081455_10002185
360 Ga0070716_100081948
361 Ga0070716_100269950
362 Ga0097621_100020458
363 Ga0097621_100053844
364 Ga0097621_100054738
365 Ga0068871_100044079
366 Ga0068871_100069860
367 Ga0068871_100080839
368 Ga0068871_100283880
369 Ga0068865_100007963
370 Ga0068865_100539756
371 Ga0097620_100019061
372 Ga0097620_100023258
373 Ga0097620_100261775
374 Ga0097620_100339835
375 Ga0099794_10055845
376 Ga0105240_10135965
377 Ga0105240_10184293
378 Ga0111539_10061770
379 Ga0105245_10006080
380 Ga0105243_10313731
381 Ga0105242_10009958
382 Ga0105248_10017120
383 Ga0105248_10265020
384 Ga0105249_10101606
385 Ga0099796_10019208
386 Ga0105239_10083401
387 Ga0105246_10010428
388 Ga0157374_10002134
389 Ga0163162_10004989
390 Ga0163162_10033031
391 Ga0157375_10034101
392 Ga0163163_10657257
393 Ga0157380_10004746
394 Ga0157380_10047139
395 Ga0157380_10061824
396 Ga0157380_10080634
397 Ga0157380_10114875
398 Ga0157380_10239715
399 Ga0157380_10395042
400 Ga0157379_10029280
401 Ga0157379_10118352
402 Ga0157376_10029486
403 Ga0157376_10036837
404 Ga0157376_10046375
405 Ga0163161_10356820
406 Ga0207697_10015523
407 Ga0207656_10090166
408 Ga0207682_10003850
409 Ga0207682_10006301
410 Ga0207680_10008777
411 Ga0207645_10058168
412 Ga0207643_10059297
413 Ga0207643_10086930
414 Ga0207643_10198086
415 Ga0207695_10117870
416 Ga0207662_10103640
417 Ga0207649_10070927
418 Ga0207681_10043911
419 Ga0207650_10011492
420 Ga0207650_10115457
421 Ga0207659_10178671
422 Ga0207670_10032774
423 Ga0207669_10053020
424 Ga0207665_10108636
425 Ga0207691_10017953
426 Ga0207691_10026787
427 Ga0207691_10053079
428 Ga0207691_10139128
429 Ga0207711_10027605
430 Ga0207689_10065015
431 Ga0207689_10261482
432 Ga0207689_10298818
433 Ga0207679_10015027
434 Ga0207679_10136570
435 Ga0207667_10124714
436 Ga0207651_10023729
437 Ga0207651_10036596
438 Ga0207651_10040607
439 Ga0207651_10088733
440 Ga0207658_10011891
441 Ga0207677_10106697
442 Ga0207703_10033000
443 Ga0207703_10038704
444 Ga0207708_10013052
445 Ga0207708_10018757
446 Ga0207708_10181684
447 Ga0207641_10008188
448 Ga0207641_10458271
449 Ga0207648_10038934
450 Ga0207648_10055429
451 Ga0207676_10017807
452 Ga0207676_10074185
453 Ga0207675_100003109
454 Ga0207675_100041294
455 Ga0207675_100058627
456 Ga0207675_100086915
457 Ga0207675_100110428
458 Ga0207675_100121017
459 Ga0207683_10033725
460 Ga0268266_10060704
461 Ga0268266_10134051
462 Ga0268265_10035936
463 Ga0268265_10302869
464 Ga0268265_10409208
465 Ga0268264_10167463
466 Ga0265762_1018187
467 Ga0265770_1000096
468 Ga0265760_10002181
469 Ga0307513_10016972
470 Ga0307513_10019257
471 Ga0307513_10032931
472 Ga0307509_10043907
473 Ga0307509_10152335
474 Ga0307413_10001382
475 Ga0307407_10023668
476 Ga0307412_10382509
477 Ga0307409_100019564
478 Ga0307409_100022288
479 Ga0307409_100129638
480 Ga0307409_100418787
481 Ga0307416_100013689
482 Ga0307416_100065695
483 Ga0307411_10001583
484 Ga0307411_10184050
485 Ga0307415_100058974
486 Ga0373945_0068733
487 Ga0373955_0015222
488 Ga0373955_0093375
489 Ga0373924_0047808
490 Ga0373933_0053507
491 Ga0373937_0002689
492 Ga0373937_0167737
493 Ga0451789_0907434
494 Ga0451793_1762667
495 Ga0451797_0904503
496 Ga0451802_0646508
497 Ga0451802_1310124
498 Ga0451802_1713735
499 Ga0451807_2472844
500 Ga0451837_1304677
501 Ga0451576_0205497
502 Ga0495603_0042642
503 Ga0495590_0063948
504 Ga0495590_0097749
505 Ga0495638_0004724
506 Ga0495638_0014803
507 Ga0495585_0031934
508 Ga0495616_0000449
509 Ga0495630_0207598
510 Ga0495632_0037874
511 Ga0495648_0097731
512 Ga0495645_0092915
513 Ga0495625_0013467
514 Ga0495625_0079661
515 Ga0495649_0022065
516 Ga0495686_0057911
517 Ga0496101_0248297
518 Ga0496102_0351548
519 Ga0496103_0252555
520 Ga0496104_0121870
521 Ga0496105_0002604
522 Ga0496108_0032696
523 Ga0496109_0030082
524 Ga0496110_0914819
525 Ga0496112_0018332
526 Ga0496114_0001840
527 Ga0496114_0002185
528 Ga0496115_0001174
529 Ga0496115_0023450
530 Ga0495678_065322
531 Ga0501067_0057880
532 Ga0501068_0001882
533 Ga0501069_0031254
534 Ga0501070_0045715
535 Ga0501071_0005307
536 Ga0501073_0011828
537 Ga0501074_0006639
538 Ga0501075_0164800
539 Ga0501076_0007251
540 Ga0501079_0002367
541 Ga0501080_0009517
542 Ga0501081_0144796
543 Ga0501083_0029128
544 Ga0495601_0017637
545 Ga0495595_0088827
546 Ga0500628_022450
547 Ga0500611_007301
548 Ga0501084_0007292
549 Ga0501082_0020621
550 Ga0530510_0080480

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01963

TraB_PrgY_gumN

TraB/PrgY/gumN family

38

300

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gym-assembly1.cif.gz_e cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.4501 17 296
5n0o-assembly1.cif.gz_A crystal structure of seleno-opha-deltac18 in complex with sam 0.4426 246 290
5n0x-assembly1.cif.gz_A crystal structure of opha-deltac6 in complex with sam 0.4409 246 290
5n0x-assembly1.cif.gz_B crystal structure of opha-deltac6 in complex with sam 0.4321 246 290
8gym-assembly1.cif.gz_e cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.4293 17 296
ID Description Score Start End Superfamily
af_Q4DS57_306_462_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.5476 234 290 3.40.50.300
2pt5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.3937 225 285 3.40.50.300
2pvzA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.3388 23 71 3.10.310.10
5h68A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.2936 191 295 3.40.50.300
2pclA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.2826 198 270 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A534DJM9-F1-model_v4 deleted 0.9696 65 292
AF-A0A3N5P4H8-F1-model_v4 TraB/GumN family protein 0.9634 58 295
AF-A0A846FV89-F1-model_v4 deleted 0.9543 116 294
AF-A0A3N5P4H8-F1-model_v4 TraB/GumN family protein 0.9517 58 295
AF-A0A0R0CGJ8-F1-model_v4 Polysaccharide biosynthesis protein GumN 0.9452 32 294

Map