F379906

General Info

Members Datasets Scaffolds Average Seq Length
274 206 194 139

Family's Representative Sequence

Representative Sequence 3300042006|Ga0439432_164675|Ga0439432_164675_95_538
Length 147
Sequence VSGYLLDTNVVSAFAPGRSTGSPQLAQWLEAHSDLLFLSVISIVEVEAGISKLHRAGANARADLLTAWIEQILGAYSERVLAFDLAAGRVAGALSDRAHATGSNPGFADIAIAATAQRYELVLLTANVRDFRTIGVRYANPFEALPQ

Samples

Sample ID Description Type Environment
1 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
2 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
3 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
4 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
5 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
6 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
7 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
8 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
9 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
10 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
11 2547132424 Nocardia nova SH22a Isolate Unclassified
12 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
13 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
14 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
15 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
16 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
17 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
18 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
19 2643221558 Rhizobium sp. Root149 Isolate Unclassified
20 2643221693 Rhizobium sp. Root491 Isolate Unclassified
21 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
22 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
23 2791355267 Rhizobium sp. L18 Isolate Nodule
24 2802429633 Rhizobium anhuiense J3 Isolate Nodule
25 2802429634 Rhizobium anhuiense S10 Isolate Nodule
26 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
27 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
28 2802429637 Rhizobium anhuiense C15 Isolate Nodule
29 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
30 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
31 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
32 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
33 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
34 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
35 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
36 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
37 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
38 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
39 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
40 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
41 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
42 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
43 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
44 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
45 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
46 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
47 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
48 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
49 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
50 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
51 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
52 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
53 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
54 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
55 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
56 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
57 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
58 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
59 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
60 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
61 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
62 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
63 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
64 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
65 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
66 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
67 2996887358 Rhizobium sp. R711 Isolate Nodule
68 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
69 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
70 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
71 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
72 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
73 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
74 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
75 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
76 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
77 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
78 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
79 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
80 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
81 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
82 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
83 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
84 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
85 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
86 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
87 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
88 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
89 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
90 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
91 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
92 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
93 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
94 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
95 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
96 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
97 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
98 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
99 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
100 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
101 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
102 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
103 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
104 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
105 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
106 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
107 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
108 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
109 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
110 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
111 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
112 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
113 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
114 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
115 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
116 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
117 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
118 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
119 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
122 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
123 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
124 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
134 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
138 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
139 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
140 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
141 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
142 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
143 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
144 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
145 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
146 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
147 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
148 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
149 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
150 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
151 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
152 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
153 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
154 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
155 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
156 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
171 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
172 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
173 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
174 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
179 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
180 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
183 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
184 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
187 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
188 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
189 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
190 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
191 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
192 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
193 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
194 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
195 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
196 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
198 8005275841 Rhizobium sp. N4311 Isolate Nodule
199 8005321885 Rhizobium sp. R72 Isolate Nodule
200 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
201 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
202 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
203 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
204 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
205 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
206 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.44
Metatranscriptomes 0.36
Isolates 29.2

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 34.31
Nodule 21.17
Rhizoplane 2.55
Rhizosphere 21.9
Stem 0
Stem Tuber 0
Unclassified 19.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000911 3300002737 Bacteria 19106
2 JGI25152J39213_1016359 3300002773 Bacteria 1432
3 JGI25150J39212_1008592 3300002774 Bacteria 1989
4 JGI25150J39212_1015553 3300002774 Bacteria 1265
5 JGI25151J46595_10000273 3300003187 Bacteria 59418
6 JGI25151J46595_10048082 3300003187 Bacteria 1478
7 JGI25151J46595_10141671 3300003187 Bacteria 585
8 JGI25165J46597_1001115 3300003214 Bacteria 16941
9 JGI25153J46596_10003637 3300003215 Bacteria 8542
10 rootH2_10256567 3300003320 Unclassified 1835
11 rootL2_10102355 3300003322 Bacteria 1625
12 rootL2_10268911 3300003322 Bacteria 2245
13 Ga0055526_1000568 3300003771 Bacteria 29103
14 Ga0055526_1004521 3300003771 Bacteria 8324
15 Ga0055524_1000327 3300003775 Bacteria 44413
16 Ga0055524_1006159 3300003775 Bacteria 5242
17 Ga0055528_1000053 3300003790 Bacteria 90557
18 Ga0055528_1000673 3300003790 Bacteria 24747
19 Ga0055540_1000096 3300003792 Bacteria 96969
20 Ga0055540_1000209 3300003792 Bacteria 55602
21 Ga0055540_1022383 3300003792 Bacteria 1618
22 Ga0055543_1000764 3300004625 Bacteria 16076
23 Ga0065165_1016248 3300005262 Bacteria 2795
24 Ga0070680_100007167 3300005336 Bacteria 8498
25 Ga0070661_100410959 3300005344 Unclassified 1071
26 Ga0070681_10000064 3300005458 Bacteria 77251
27 Ga0070679_100000528 3300005530 Bacteria 32503
28 Ga0070665_100007634 3300005548 Bacteria 10997
29 Ga0068857_100213311 3300005577 Bacteria 1762
30 Ga0068854_100240193 3300005578 Bacteria 1442
31 Ga0068856_100133053 3300005614 Bacteria 2492
32 Ga0075365_10011229 3300006038 Bacteria 5259
33 Ga0075368_10047113 3300006042 Bacteria 1706
34 Ga0075363_100118059 3300006048 Bacteria 1479
35 Ga0075363_100162653 3300006048 Bacteria 1264
36 Ga0075363_100322516 3300006048 Bacteria 899
37 Ga0075364_10000974 3300006051 Bacteria 15102
38 Ga0075364_10010433 3300006051 Bacteria 5611
39 Ga0075364_10233702 3300006051 Bacteria 1248
40 Ga0075367_10105716 3300006178 Bacteria 1724
41 Ga0075367_10226134 3300006178 Bacteria 1171
42 Ga0075369_10006928 3300006186 Bacteria 4302
43 Ga0075369_10070943 3300006186 Bacteria 1533
44 Ga0075369_10103108 3300006186 Bacteria 1281
45 Ga0075369_10157150 3300006186 Bacteria 1041
46 Ga0075369_10630105 3300006186 Bacteria 514
47 Ga0075366_10008723 3300006195 Bacteria 5644
48 Ga0075366_10088256 3300006195 Bacteria 1857
49 Ga0075366_10117192 3300006195 Bacteria 1604
50 Ga0075370_10008882 3300006353 Bacteria 5190
51 Ga0075370_10008922 3300006353 Bacteria 5181
52 Ga0079104_1000360 3300006946 Bacteria 54768
53 Ga0099795_10060829 3300007788 Bacteria 1401
54 Ga0105243_10301786 3300009148 Bacteria 1452
55 Ga0105238_10257151 3300009551 Unclassified 1725
56 Ga0123340_1064969 3300009763 Bacteria 968
57 Ga0123341_1075417 3300009765 Bacteria 1396
58 Ga0123342_1043727 3300009766 Bacteria 1535
59 Ga0099796_10121848 3300010159 Unclassified 1003
60 Ga0105246_10324635 3300011119 Bacteria 1252
61 Ga0157373_10008787 3300013100 Bacteria 7483
62 Ga0157371_10000136 3300013102 Bacteria 107554
63 Ga0157370_10000065 3300013104 Bacteria 113986
64 Ga0157370_10025388 3300013104 Bacteria 5865
65 Ga0157369_10000479 3300013105 Bacteria 53020
66 Ga0157372_11133868 3300013307 Bacteria 904
67 Ga0157380_10386267 3300014326 Bacteria 1323
68 Ga0209437_100435 3300025233 Bacteria 35998
69 Ga0207425_1001191 3300025245 Bacteria 11559
70 Ga0209129_1000560 3300025258 Bacteria 25649
71 Ga0209129_1000739 3300025258 Bacteria 20890
72 Ga0209233_1000574 3300025261 Bacteria 19670
73 Ga0209673_1000067 3300025273 Bacteria 249077
74 Ga0209673_1000162 3300025273 Bacteria 139078
75 Ga0209676_1094813 3300025292 Bacteria 648
76 Ga0209025_1000044 3300025294 Bacteria 349480
77 Ga0209025_1000530 3300025294 Bacteria 72703
78 Ga0209025_1001909 3300025294 Bacteria 24278
79 Ga0209564_1000092 3300025295 Bacteria 249018
80 Ga0209564_1000234 3300025295 Bacteria 121532
81 Ga0209758_1000195 3300025297 Bacteria 133982
82 Ga0209758_1000514 3300025297 Bacteria 62177
83 Ga0209758_1001607 3300025297 Bacteria 25796
84 Ga0209758_1002272 3300025297 Bacteria 19908
85 Ga0209256_1000337 3300025299 Bacteria 78188
86 Ga0209256_1002543 3300025299 Bacteria 14600
87 Ga0209256_1061149 3300025299 Bacteria 877
88 Ga0209051_1017668 3300025303 Bacteria 3181
89 Ga0207707_10000133 3300025912 Bacteria 77264
90 Ga0207660_10001984 3300025917 Bacteria 13633
91 Ga0207649_11280733 3300025920 Bacteria 580
92 Ga0207652_10000701 3300025921 Bacteria 32451
93 Ga0207694_10864344 3300025924 Unclassified 764
94 Ga0207702_10539538 3300026078 Bacteria 1140
95 Ga0207674_10294010 3300026116 Bacteria 1573
96 Ga0209281_1000303 3300027111 Bacteria 88888
97 Ga0209179_1115741 3300027512 Unclassified 599
98 Ga0209813_10013578 3300027866 Bacteria 2177
99 Ga0268266_10008935 3300028379 Bacteria 8866
100 Ga0307405_10000728 3300031731 Bacteria 12824
101 Ga0439465_0072664 3300041413 Bacteria 1155
102 Ga0451837_0342355 3300041494 Bacteria 1180
103 Ga0451839_1503336 3300041496 Bacteria 3876
104 Ga0451845_0535572 3300041501 Bacteria 1732
105 Ga0451847_0880430 3300041503 Bacteria 3314
106 Ga0451851_0507517 3300041507 Bacteria 2117
107 Ga0451843_1578919 3300041509 Bacteria 520
108 Ga0451855_0935309 3300041511 Bacteria 3311
109 Ga0439432_164675 3300042006 Bacteria 648
110 Ga0466965_0060710 3300044683 Bacteria 1889
111 Ga0495606_0000848 3300046507 Bacteria 45957
112 Ga0495608_0508742 3300046511 Bacteria 729
113 Ga0495620_0041517 3300046515 Bacteria 2017
114 Ga0495643_0037524 3300046522 Bacteria 2657
115 Ga0495640_0489634 3300046533 Bacteria 749
116 Ga0495621_0122389 3300046539 Bacteria 1006
117 Ga0495656_0105286 3300046615 Bacteria 1311
118 Ga0495588_0376805 3300046674 Bacteria 745
119 Ga0495649_0285893 3300046694 Bacteria 842
120 Ga0495600_0396777 3300046809 Bacteria 859
121 Ga0495672_0517769 3300047320 Bacteria 528
122 Ga0495680_0499338 3300047322 Bacteria 826
123 Ga0496100_0869520 3300048903 Bacteria 707
124 Ga0496101_0408969 3300048904 Bacteria 1069
125 Ga0496108_0455808 3300048911 Bacteria 1117
126 Ga0496110_0159334 3300048913 Bacteria 2045
127 Ga0496113_0059420 3300048916 Bacteria 2880
128 Ga0496114_0080081 3300048917 Bacteria 2758
129 Ga0496116_0086036 3300048919 Bacteria 1930
130 Ga0496116_0235148 3300048919 Bacteria 925
131 Ga0496117_0000033 3300048920 Bacteria 345605
132 Ga0496117_0001278 3300048920 Bacteria 37300
133 Ga0496118_0003524 3300048921 Bacteria 19603
134 Ga0496118_0165473 3300048921 Bacteria 1360
135 Ga0496119_0047149 3300048922 Bacteria 2683
136 Ga0496119_0058097 3300048922 Bacteria 2333
137 Ga0496120_0000138 3300048923 Bacteria 122503
138 Ga0496120_0004446 3300048923 Bacteria 11753
139 Ga0496121_0000005 3300048924 Bacteria 1034486
140 Ga0496121_0050943 3300048924 Bacteria 3492
141 Ga0496121_0202173 3300048924 Bacteria 1415
142 Ga0496122_0000068 3300048925 Bacteria 226155
143 Ga0496122_0407930 3300048925 Bacteria 687
144 Ga0496123_0000059 3300048926 Bacteria 226155
145 Ga0496123_0026484 3300048926 Bacteria 4341
146 Ga0496124_0002259 3300048927 Bacteria 25563
147 Ga0496124_0002987 3300048927 Bacteria 21164
148 Ga0496124_0040939 3300048927 Bacteria 4002
149 Ga0496124_0043811 3300048927 Bacteria 3844
150 Ga0496124_0056898 3300048927 Bacteria 3296
151 Ga0496124_0289076 3300048927 Bacteria 1191
152 Ga0496125_0079311 3300048928 Bacteria 2519
153 Ga0496125_0674194 3300048928 Bacteria 553
154 Ga0496126_0001850 3300048929 Bacteria 30878
155 Ga0496126_0273717 3300048929 Bacteria 1400
156 Ga0496126_0391283 3300048929 Bacteria 1129
157 Ga0496126_0399333 3300048929 Bacteria 1115
158 Ga0496126_0854747 3300048929 Bacteria 693
159 Ga0501034_0335037 3300049571 Bacteria 1444
160 Ga0501238_022025 3300049671 Bacteria 904
161 Ga0501280_016426 3300049776 Bacteria 1068
162 nmdc:mga03683_3451_c1 3300050489 Bacteria 5104
163 nmdc:mga03n38_185561_c1 3300050490 Bacteria 1068
164 nmdc:mga00v17_749824_c1 3300050491 Bacteria 624
165 nmdc:mga00v17_806_c1 3300050491 Bacteria 17040
166 nmdc:mga00v17_8_c1 3300050491 Bacteria 141008
167 nmdc:mga00v17_9237_c1 3300050491 Bacteria 5328
168 nmdc:mga0yw44_17693_c1 3300050492 Bacteria 3885
169 nmdc:mga0yw44_35235_c1 3300050492 Bacteria 2940
170 nmdc:mga0k408_3326_c1 3300050493 Bacteria 8506
171 nmdc:mga0k408_91590_c1 3300050493 Bacteria 1786
172 nmdc:mga0k408_92701_c1 3300050493 Bacteria 1776
173 nmdc:mga06z11_172012_c1 3300050494 Bacteria 1244
174 nmdc:mga06z11_218928_c1 3300050494 Bacteria 1112
175 nmdc:mga06z11_30279_c1 3300050494 Bacteria 2618
176 nmdc:mga07m45_32554_c1 3300050496 Bacteria 2891
177 nmdc:mga07m45_45417_c1 3300050496 Bacteria 2467
178 nmdc:mga0sz30_19668_c1 3300050516 Bacteria 2395
179 nmdc:mga0sz30_230068_c1 3300050516 Bacteria 825
180 nmdc:mga0sz30_37894_c1 3300050516 Bacteria 2019
181 nmdc:mga0sz30_517845_c1 3300050516 Bacteria 537
182 nmdc:mga0sz30_8945_c1 3300050516 Bacteria 3796
183 Ga0500562_044644 3300053108 Bacteria 1180
184 Ga0500607_327110 3300053121 Bacteria 546
185 Ga0500608_057096 3300053122 Bacteria 1870
186 Ga0500618_002290 3300053125 Bacteria 7372
187 Ga0500618_003585 3300053125 Bacteria 5274
188 Ga0500618_064289 3300053125 Bacteria 824
189 Ga0500561_0000256 3300053137 Bacteria 9260
190 Ga0500573_0016262 3300053140 Bacteria 4221
191 Ga0500616_0000557 3300053153 Bacteria 46048
192 Ga0500622_0078675 3300053156 Bacteria 1654
193 Ga0500622_0162189 3300053156 Bacteria 1047
194 Ga0587088_093701 3300059508 Bacteria 661

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009763 Ga0123340_1064969 Ga0123340_10649691 131
2 3300009765 Ga0123341_1075417 Ga0123341_10754173 131
3 3300009766 Ga0123342_1043727 Ga0123342_10437273 131
4 3300006178 Ga0075367_10226134 Ga0075367_102261343 132
5 3300050494 nmdc:mga06z11_218928_c1 nmdc:mga06z11_218928_c1_183_602 132
6 3300006946 Ga0079104_1000360 Ga0079104_100036056 134
7 3300025299 Ga0209256_1061149 Ga0209256_10611492 134
8 3300027111 Ga0209281_1000303 Ga0209281_100030352 134
9 3300027512 Ga0209179_1115741 Ga0209179_11157412 134
10 3300041413 Ga0439465_0072664 Ga0439465_0072664_542_967 134
11 iso_pu_bacteria 2509276022 2509396458 135
12 iso_pu_bacteria 2510065019 2510135903 135
13 iso_pu_bacteria 2510461076 2510892416 135
14 iso_pu_bacteria 2510917028 2511186764 135
15 iso_pu_bacteria 2513237084 2513568182 135
16 iso_pu_bacteria 2513237146 2513923988 135
17 iso_pu_bacteria 2513237162 2514021212 135
18 iso_pu_bacteria 2515154114 2515643417 135
19 iso_pu_bacteria 2516653077 2517040542 135
20 iso_pu_bacteria 2517093000 2517098067 135
21 iso_pu_bacteria 2547132424 2548694228 135
22 iso_pu_bacteria 2554235003 2554249478 135
23 iso_pu_bacteria 2558860242 2559298186 135
24 iso_pu_bacteria 2582581294 2585203329 135
25 iso_pu_bacteria 2585427594 2585846134 135
26 iso_pu_bacteria 2599185170 2599416033 135
27 iso_pu_bacteria 2615840624 2616297639 135
28 iso_pu_bacteria 2615840698 2616555431 135
29 iso_pu_bacteria 2643221558 2643810574 135
30 iso_pu_bacteria 2643221693 2644523616 135
31 iso_pu_bacteria 2667528174 2671116666 135
32 iso_pu_bacteria 2738541333 2739033394 135
33 iso_pu_bacteria 2791355267 2793370414 135
34 iso_pu_bacteria 2802429633 2806049292 135
35 iso_pu_bacteria 2802429634 2806055570 135
36 iso_pu_bacteria 2802429635 2806061404 135
37 iso_pu_bacteria 2802429636 2806069926 135
38 iso_pu_bacteria 2802429637 2806077854 135
39 iso_pu_bacteria 2808606387 2808989301 135
40 iso_pu_bacteria 2818991439 2819561699 135
41 iso_pu_bacteria 2829745981 2829749005 135
42 iso_pu_bacteria 2838022645 2838025844 135
43 iso_pu_bacteria 2838035591 2838036152 135
44 iso_pu_bacteria 2838661181 2838666405 135
45 iso_pu_bacteria 2840764183 2840770204 135
46 iso_pu_bacteria 2842110456 2842113855 135
47 iso_pu_bacteria 2842198810 2842200424 135
48 iso_pu_bacteria 2856320880 2856325402 135
49 iso_pu_bacteria 2857516855 2857523113 135
50 iso_pu_bacteria 2869278585 2869285090 135
51 iso_pu_bacteria 2874139085 2874146029 135
52 iso_pu_bacteria 2878738818 2878745382 135
53 iso_pu_bacteria 2888337043 2888339580 135
54 iso_pu_bacteria 2923556063 2923561405 135
55 iso_pu_bacteria 2924718760 2924724253 135
56 iso_pu_bacteria 2924776078 2924783626 135
57 iso_pu_bacteria 2926760298 2926765026 135
58 iso_pu_bacteria 2929138655 2929142865 135
59 iso_pu_bacteria 2933586486 2933589509 135
60 iso_pu_bacteria 2936367885 2936371307 135
61 iso_pu_bacteria 2936375103 2936375490 135
62 iso_pu_bacteria 2937877337 2937881967 135
63 iso_pu_bacteria 2937972304 2937978430 135
64 iso_pu_bacteria 2958034702 2958040792 135
65 iso_pu_bacteria 2958041894 2958056874 135
66 iso_pu_bacteria 2958064165 2958067578 135
67 iso_pu_bacteria 2958084443 2958089089 135
68 iso_pu_bacteria 2958092219 2958095158 135
69 iso_pu_bacteria 2958144490 2958150354 135
70 iso_pu_bacteria 2968016561 2968018287 135
71 iso_pu_bacteria 2970469710 2970471539 135
72 iso_pu_bacteria 2970593180 2970599704 135
73 iso_pu_bacteria 2979089926 2979095054 135
74 iso_pu_bacteria 2979095461 2979097930 135
75 iso_pu_bacteria 2984587000 2984587714 135
76 iso_pu_bacteria 2996348954 2996350325 135
77 iso_pu_bacteria 2996887358 2996887727 135
78 iso_pu_bacteria 3004275668 3004277023 135
79 iso_pu_bacteria 3005445848 3005450615 135
80 iso_pu_bacteria 650716007 650741731 135
81 iso_pu_bacteria 8005275841 8005277512 135
82 iso_pu_bacteria 8005321885 8005322254 135
83 iso_pu_bacteria 8005376324 8005380279 135
84 iso_pu_bacteria 8005563573 8005565108 135
85 iso_pu_bacteria 8018127388 8018134706 135
86 iso_pu_bacteria 8024479707 8024482380 135
87 iso_pu_bacteria 8046767195 8046770634 135
88 iso_pu_bacteria 8056375014 8056377808 135
89 iso_pu_bacteria 8056875544 8056876963 135
90 iso_pu_bacteria 8056875544 8056877030 135
91 3300007788 Ga0099795_10060829 Ga0099795_100608293 137
92 3300010159 Ga0099796_10121848 Ga0099796_101218483 137
93 3300013307 Ga0157372_11133868 Ga0157372_111338682 137
94 3300014326 Ga0157380_10386267 Ga0157380_103862672 137
95 3300042006 Ga0439432_164675 Ga0439432_164675_95_538 137
96 3300041507 Ga0451851_0507517 Ga0451851_0507517_1583_2005 138
97 3300046511 Ga0495608_0508742 Ga0495608_0508742_28_444 138
98 3300046539 Ga0495621_0122389 Ga0495621_0122389_230_646 138
99 3300046615 Ga0495656_0105286 Ga0495656_0105286_61_477 138
100 3300046809 Ga0495600_0396777 Ga0495600_0396777_198_614 138
101 3300047322 Ga0495680_0499338 Ga0495680_0499338_335_751 138
102 3300048911 Ga0496108_0455808 Ga0496108_0455808_297_713 138
103 3300048913 Ga0496110_0159334 Ga0496110_0159334_291_707 138
104 3300048917 Ga0496114_0080081 Ga0496114_0080081_921_1337 138
105 3300002737 JGI25162J39368_1000911 JGI25162J39368_100091112 139
106 3300002773 JGI25152J39213_1016359 JGI25152J39213_10163592 139
107 3300002774 JGI25150J39212_1008592 JGI25150J39212_10085922 139
108 3300002774 JGI25150J39212_1015553 JGI25150J39212_10155531 139
109 3300003187 JGI25151J46595_10000273 JGI25151J46595_1000027311 139
110 3300003187 JGI25151J46595_10048082 JGI25151J46595_100480823 139
111 3300003187 JGI25151J46595_10141671 JGI25151J46595_101416712 139
112 3300003214 JGI25165J46597_1001115 JGI25165J46597_10011159 139
113 3300003215 JGI25153J46596_10003637 JGI25153J46596_100036373 139
114 3300003320 rootH2_10256567 rootH2_102565673 139
115 3300003322 rootL2_10102355 rootL2_101023552 139
116 3300003322 rootL2_10268911 rootL2_102689112 139
117 3300003771 Ga0055526_1000568 Ga0055526_10005684 139
118 3300003771 Ga0055526_1004521 Ga0055526_100452110 139
119 3300003775 Ga0055524_1000327 Ga0055524_100032715 139
120 3300003775 Ga0055524_1006159 Ga0055524_10061596 139
121 3300003790 Ga0055528_1000053 Ga0055528_100005339 139
122 3300003790 Ga0055528_1000673 Ga0055528_100067313 139
123 3300003792 Ga0055540_1000096 Ga0055540_10000967 139
124 3300003792 Ga0055540_1000209 Ga0055540_100020920 139
125 3300003792 Ga0055540_1022383 Ga0055540_10223832 139
126 3300004625 Ga0055543_1000764 Ga0055543_10007641 139
127 3300005262 Ga0065165_1016248 Ga0065165_10162484 139
128 3300005336 Ga0070680_100007167 Ga0070680_1000071673 139
129 3300005344 Ga0070661_100410959 Ga0070661_1004109593 139
130 3300005458 Ga0070681_10000064 Ga0070681_1000006435 139
131 3300005530 Ga0070679_100000528 Ga0070679_1000005283 139
132 3300005548 Ga0070665_100007634 Ga0070665_1000076345 139
133 3300005577 Ga0068857_100213311 Ga0068857_1002133113 139
134 3300005578 Ga0068854_100240193 Ga0068854_1002401932 139
135 3300005614 Ga0068856_100133053 Ga0068856_1001330532 139
136 3300006038 Ga0075365_10011229 Ga0075365_100112294 139
137 3300006042 Ga0075368_10047113 Ga0075368_100471132 139
138 3300006048 Ga0075363_100118059 Ga0075363_1001180592 139
139 3300006048 Ga0075363_100162653 Ga0075363_1001626532 139
140 3300006048 Ga0075363_100322516 Ga0075363_1003225162 139
141 3300006051 Ga0075364_10000974 Ga0075364_1000097410 139
142 3300006051 Ga0075364_10010433 Ga0075364_100104334 139
143 3300006051 Ga0075364_10233702 Ga0075364_102337022 139
144 3300006178 Ga0075367_10105716 Ga0075367_101057163 139
145 3300006186 Ga0075369_10006928 Ga0075369_100069286 139
146 3300006186 Ga0075369_10070943 Ga0075369_100709433 139
147 3300006186 Ga0075369_10103108 Ga0075369_101031082 139
148 3300006186 Ga0075369_10157150 Ga0075369_101571502 139
149 3300006186 Ga0075369_10630105 Ga0075369_106301052 139
150 3300006195 Ga0075366_10008723 Ga0075366_100087235 139
151 3300006195 Ga0075366_10088256 Ga0075366_100882562 139
152 3300006195 Ga0075366_10117192 Ga0075366_101171922 139
153 3300006353 Ga0075370_10008882 Ga0075370_100088827 139
154 3300006353 Ga0075370_10008922 Ga0075370_100089224 139
155 3300009148 Ga0105243_10301786 Ga0105243_103017862 139
156 3300009551 Ga0105238_10257151 Ga0105238_102571514 139
157 3300011119 Ga0105246_10324635 Ga0105246_103246352 139
158 3300013100 Ga0157373_10008787 Ga0157373_100087879 139
159 3300013102 Ga0157371_10000136 Ga0157371_1000013656 139
160 3300013104 Ga0157370_10000065 Ga0157370_1000006571 139
161 3300013104 Ga0157370_10025388 Ga0157370_100253882 139
162 3300013105 Ga0157369_10000479 Ga0157369_1000047925 139
163 3300025233 Ga0209437_100435 Ga0209437_10043518 139
164 3300025245 Ga0207425_1001191 Ga0207425_100119112 139
165 3300025258 Ga0209129_1000560 Ga0209129_100056024 139
166 3300025258 Ga0209129_1000739 Ga0209129_10007394 139
167 3300025261 Ga0209233_1000574 Ga0209233_100057410 139
168 3300025273 Ga0209673_1000067 Ga0209673_100006735 139
169 3300025273 Ga0209673_1000162 Ga0209673_100016295 139
170 3300025292 Ga0209676_1094813 Ga0209676_10948131 139
171 3300025294 Ga0209025_1000044 Ga0209025_1000044235 139
172 3300025294 Ga0209025_1000530 Ga0209025_100053044 139
173 3300025294 Ga0209025_1001909 Ga0209025_100190930 139
174 3300025295 Ga0209564_1000092 Ga0209564_100009235 139
175 3300025295 Ga0209564_1000234 Ga0209564_100023473 139
176 3300025297 Ga0209758_1000195 Ga0209758_100019538 139
177 3300025297 Ga0209758_1000514 Ga0209758_100051425 139
178 3300025297 Ga0209758_1001607 Ga0209758_100160733 139
179 3300025297 Ga0209758_1002272 Ga0209758_100227215 139
180 3300025299 Ga0209256_1000337 Ga0209256_100033740 139
181 3300025299 Ga0209256_1002543 Ga0209256_100254312 139
182 3300025303 Ga0209051_1017668 Ga0209051_10176683 139
183 3300025912 Ga0207707_10000133 Ga0207707_1000013338 139
184 3300025917 Ga0207660_10001984 Ga0207660_100019848 139
185 3300025920 Ga0207649_11280733 Ga0207649_112807331 139
186 3300025921 Ga0207652_10000701 Ga0207652_1000070128 139
187 3300025924 Ga0207694_10864344 Ga0207694_108643442 139
188 3300026078 Ga0207702_10539538 Ga0207702_105395382 139
189 3300026116 Ga0207674_10294010 Ga0207674_102940103 139
190 3300027866 Ga0209813_10013578 Ga0209813_100135782 139
191 3300028379 Ga0268266_10008935 Ga0268266_100089354 139
192 3300031731 Ga0307405_10000728 Ga0307405_100007288 139
193 3300041494 Ga0451837_0342355 Ga0451837_0342355_683_1108 139
194 3300041496 Ga0451839_1503336 Ga0451839_1503336_1821_2246 139
195 3300041501 Ga0451845_0535572 Ga0451845_0535572_348_773 139
196 3300041503 Ga0451847_0880430 Ga0451847_0880430_242_667 139
197 3300041509 Ga0451843_1578919 Ga0451843_1578919_33_458 139
198 3300041511 Ga0451855_0935309 Ga0451855_0935309_2171_2596 139
199 3300044683 Ga0466965_0060710 Ga0466965_0060710_206_625 139
200 3300046507 Ga0495606_0000848 Ga0495606_0000848_9658_10077 139
201 3300046515 Ga0495620_0041517 Ga0495620_0041517_164_583 139
202 3300046522 Ga0495643_0037524 Ga0495643_0037524_73_492 139
203 3300046533 Ga0495640_0489634 Ga0495640_0489634_142_567 139
204 3300046674 Ga0495588_0376805 Ga0495588_0376805_92_517 139
205 3300046694 Ga0495649_0285893 Ga0495649_0285893_64_483 139
206 3300047320 Ga0495672_0517769 Ga0495672_0517769_48_467 139
207 3300048903 Ga0496100_0869520 Ga0496100_0869520_110_529 139
208 3300048904 Ga0496101_0408969 Ga0496101_0408969_190_609 139
209 3300048916 Ga0496113_0059420 Ga0496113_0059420_2133_2552 139
210 3300048919 Ga0496116_0086036 Ga0496116_0086036_1248_1667 139
211 3300048919 Ga0496116_0235148 Ga0496116_0235148_156_575 139
212 3300048920 Ga0496117_0000033 Ga0496117_0000033_268918_269337 139
213 3300048920 Ga0496117_0001278 Ga0496117_0001278_35419_35838 139
214 3300048921 Ga0496118_0003524 Ga0496118_0003524_2226_2645 139
215 3300048921 Ga0496118_0165473 Ga0496118_0165473_703_1122 139
216 3300048922 Ga0496119_0047149 Ga0496119_0047149_699_1118 139
217 3300048922 Ga0496119_0058097 Ga0496119_0058097_1836_2255 139
218 3300048923 Ga0496120_0000138 Ga0496120_0000138_19904_20323 139
219 3300048923 Ga0496120_0004446 Ga0496120_0004446_2468_2887 139
220 3300048924 Ga0496121_0000005 Ga0496121_0000005_1016465_1016884 139
221 3300048924 Ga0496121_0050943 Ga0496121_0050943_352_771 139
222 3300048924 Ga0496121_0202173 Ga0496121_0202173_546_1037 139
223 3300048925 Ga0496122_0000068 Ga0496122_0000068_117114_117533 139
224 3300048925 Ga0496122_0407930 Ga0496122_0407930_257_676 139
225 3300048926 Ga0496123_0000059 Ga0496123_0000059_108623_109042 139
226 3300048926 Ga0496123_0026484 Ga0496123_0026484_2297_2716 139
227 3300048927 Ga0496124_0002259 Ga0496124_0002259_15548_15967 139
228 3300048927 Ga0496124_0002987 Ga0496124_0002987_10561_10980 139
229 3300048927 Ga0496124_0040939 Ga0496124_0040939_2880_3299 139
230 3300048927 Ga0496124_0043811 Ga0496124_0043811_2283_2774 139
231 3300048927 Ga0496124_0056898 Ga0496124_0056898_574_993 139
232 3300048927 Ga0496124_0289076 Ga0496124_0289076_19_438 139
233 3300048928 Ga0496125_0079311 Ga0496125_0079311_1716_2135 139
234 3300048928 Ga0496125_0674194 Ga0496125_0674194_47_466 139
235 3300048929 Ga0496126_0001850 Ga0496126_0001850_1033_1452 139
236 3300048929 Ga0496126_0273717 Ga0496126_0273717_778_1197 139
237 3300048929 Ga0496126_0391283 Ga0496126_0391283_195_686 139
238 3300048929 Ga0496126_0399333 Ga0496126_0399333_346_765 139
239 3300048929 Ga0496126_0854747 Ga0496126_0854747_63_482 139
240 3300049571 Ga0501034_0335037 Ga0501034_0335037_853_1272 139
241 3300049671 Ga0501238_022025 Ga0501238_022025_44_463 139
242 3300049776 Ga0501280_016426 Ga0501280_016426_359_790 139
243 3300050489 nmdc:mga03683_3451_c1 nmdc:mga03683_3451_c1_2479_2898 139
244 3300050490 nmdc:mga03n38_185561_c1 nmdc:mga03n38_185561_c1_102_521 139
245 3300050491 nmdc:mga00v17_749824_c1 nmdc:mga00v17_749824_c1_24_443 139
246 3300050491 nmdc:mga00v17_806_c1 nmdc:mga00v17_806_c1_10281_10700 139
247 3300050491 nmdc:mga00v17_8_c1 nmdc:mga00v17_8_c1_107552_107971 139
248 3300050491 nmdc:mga00v17_9237_c1 nmdc:mga00v17_9237_c1_1243_1662 139
249 3300050492 nmdc:mga0yw44_17693_c1 nmdc:mga0yw44_17693_c1_2922_3341 139
250 3300050492 nmdc:mga0yw44_35235_c1 nmdc:mga0yw44_35235_c1_1696_2115 139
251 3300050493 nmdc:mga0k408_3326_c1 nmdc:mga0k408_3326_c1_6008_6427 139
252 3300050493 nmdc:mga0k408_91590_c1 nmdc:mga0k408_91590_c1_1216_1635 139
253 3300050493 nmdc:mga0k408_92701_c1 nmdc:mga0k408_92701_c1_247_666 139
254 3300050494 nmdc:mga06z11_172012_c1 nmdc:mga06z11_172012_c1_41_460 139
255 3300050494 nmdc:mga06z11_30279_c1 nmdc:mga06z11_30279_c1_257_676 139
256 3300050496 nmdc:mga07m45_32554_c1 nmdc:mga07m45_32554_c1_1229_1648 139
257 3300050496 nmdc:mga07m45_45417_c1 nmdc:mga07m45_45417_c1_1604_2023 139
258 3300050516 nmdc:mga0sz30_19668_c1 nmdc:mga0sz30_19668_c1_1586_2005 139
259 3300050516 nmdc:mga0sz30_230068_c1 nmdc:mga0sz30_230068_c1_372_791 139
260 3300050516 nmdc:mga0sz30_37894_c1 nmdc:mga0sz30_37894_c1_1132_1551 139
261 3300050516 nmdc:mga0sz30_517845_c1 nmdc:mga0sz30_517845_c1_82_501 139
262 3300050516 nmdc:mga0sz30_8945_c1 nmdc:mga0sz30_8945_c1_564_983 139
263 3300053108 Ga0500562_044644 Ga0500562_044644_665_1093 139
264 3300053121 Ga0500607_327110 Ga0500607_327110_104_529 139
265 3300053122 Ga0500608_057096 Ga0500608_057096_1026_1451 139
266 3300053125 Ga0500618_002290 Ga0500618_002290_1209_1628 139
267 3300053125 Ga0500618_003585 Ga0500618_003585_4643_5062 139
268 3300053125 Ga0500618_064289 Ga0500618_064289_10_429 139
269 3300053137 Ga0500561_0000256 Ga0500561_0000256_8252_8671 139
270 3300053140 Ga0500573_0016262 Ga0500573_0016262_2460_2882 139
271 3300053153 Ga0500616_0000557 Ga0500616_0000557_42505_42924 139
272 3300053156 Ga0500622_0078675 Ga0500622_0078675_1180_1599 139
273 3300053156 Ga0500622_0162189 Ga0500622_0162189_499_918 139
274 3300059508 Ga0587088_093701 Ga0587088_093701_52_471 139

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

4

136

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.9776 1 139
2h1c-assembly1.cif.gz_A crystal structure of fitacb from neisseria gonorrhoeae 0.9712 1 139
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.9707 1 139
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.8633 1 139
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.8568 1 139
ID Description Score Start End Superfamily
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9776 1 139 3.40.50.1010
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9707 1 139 3.40.50.1010
af_P9WF99_2_82_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8767 3 70 3.40.50.1010
5k8jC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8313 1 134 3.40.50.1010
af_P9WFA7_1_124_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8247 1 127 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A389MK40-F1-model_v4 PIN domain-containing protein 0.9939 1 97
AF-A0A554FQH5-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9891 1 110 GO:0004518
GO:0046872
AF-A4BPB6-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9877 1 139 GO:0000287
GO:0004540
GO:0090729
AF-A0A317NPZ7-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9871 1 138 GO:0000287
GO:0004540
GO:0090729
AF-A0A6N4TQB5-F1-model_v4 deleted 0.9869 1 138

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pLDDT pTM Quality
94.73 0.88 High
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Predicted Structure (AlphaFold2)

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