F379804

General Info

Members Datasets Scaffolds Average Seq Length
274 154 548 203

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10959511|Ga0207708_109595111
Length 207
Sequence MSPVERREAIIDATLAVMLRQGMAATTARDVAREMGTSSGLLHHYFASMDELLAAAFERAASHGLTATREAMASVSVSVGGEVEQVWAFFATYVRAEQDWAFQLWLDAWAEASRRPAVRAMSQRLNVAWQQLLAQTIGEGVATGKMTCGEPDAAAWRILSLLDGLALQAVAHRDAIDREAVIRWSVANAETELGLARGSLSRRGGVP

Samples

Sample ID Description Type Environment
1 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
96 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
97 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
98 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
99 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
100 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
101 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
102 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.82
Nodule 0
Rhizoplane 3.65
Rhizosphere 93.43
Stem 0
Stem Tuber 0
Unclassified 28.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207708_10959511 3300026075 Bacteria 742
2 Ga0070683_100169119 3300005329 Unclassified 2074
3 Ga0068869_100018405 3300005334 Bacteria 4754
4 Ga0070680_100323611 3300005336 Archaea 1309
5 Ga0068868_100086421 3300005338 Unclassified 2521
6 Ga0070661_100119939 3300005344 Unclassified 1969
7 Ga0070692_10060722 3300005345 Unclassified 1991
8 Ga0070668_100082297 3300005347 Unclassified 2525
9 Ga0070668_100615882 3300005347 Bacteria 951
10 Ga0070675_100026935 3300005354 Bacteria 4616
11 Ga0070674_100002978 3300005356 Bacteria 9409
12 Ga0070674_100313108 3300005356 Unclassified 1256
13 Ga0070673_100023810 3300005364 Bacteria 4479
14 Ga0070688_100027749 3300005365 Bacteria 3373
15 Ga0070701_10001640 3300005438 Bacteria 8365
16 Ga0070705_100094252 3300005440 Bacteria 1874
17 Ga0070700_100004044 3300005441 Bacteria 7633
18 Ga0070694_100217953 3300005444 Bacteria 1430
19 Ga0070694_100491616 3300005444 Bacteria 975
20 Ga0070678_100094441 3300005456 Unclassified 2302
21 Ga0070662_100010250 3300005457 Bacteria 6143
22 Ga0070698_100187106 3300005471 Unclassified 2008
23 Ga0070698_100201401 3300005471 Bacteria 1926
24 Ga0070699_100010947 3300005518 Bacteria 7845
25 Ga0070684_100574021 3300005535 Unclassified 1047
26 Ga0070697_100030555 3300005536 Bacteria 4328
27 Ga0068853_100276365 3300005539 Unclassified 1548
28 Ga0070672_100410557 3300005543 Unclassified 1162
29 Ga0070686_100014139 3300005544 Bacteria 4591
30 Ga0070695_100488028 3300005545 Bacteria 951
31 Ga0070693_100003008 3300005547 Bacteria 7812
32 Ga0070704_100028854 3300005549 Bacteria 3697
33 Ga0070664_100099314 3300005564 Unclassified 2529
34 Ga0068857_100058437 3300005577 Unclassified 3424
35 Ga0068854_100094724 3300005578 Unclassified 2228
36 Ga0070702_100123119 3300005615 Unclassified 1626
37 Ga0068859_100077694 3300005617 Bacteria 3360
38 Ga0068870_10042787 3300005840 Unclassified 2359
39 Ga0068870_10234331 3300005840 Bacteria 1130
40 Ga0068863_100092392 3300005841 Unclassified 2871
41 Ga0068860_100024510 3300005843 Bacteria 5828
42 Ga0068862_100022388 3300005844 Bacteria 5286
43 Ga0075365_10153535 3300006038 Bacteria 1602
44 Ga0075431_100132559 3300006847 Unclassified 2570
45 Ga0075433_10100890 3300006852 Unclassified 2556
46 Ga0068865_100018583 3300006881 Bacteria 4488
47 Ga0097620_100077691 3300006931 Bacteria 3360
48 Ga0111539_10035961 3300009094 Bacteria 5993
49 Ga0111539_10260543 3300009094 Bacteria 2018
50 Ga0111539_10923761 3300009094 Bacteria 1015
51 Ga0105245_10095491 3300009098 Unclassified 2743
52 Ga0105247_10050059 3300009101 Unclassified 2570
53 Ga0114129_10072007 3300009147 Bacteria 4819
54 Ga0114129_10497366 3300009147 Bacteria 1593
55 Ga0105243_10059702 3300009148 Unclassified 3044
56 Ga0105243_10419707 3300009148 Bacteria 1247
57 Ga0105243_10585602 3300009148 Bacteria 1072
58 Ga0105242_10031070 3300009176 Bacteria 4264
59 Ga0105242_10098865 3300009176 Bacteria 2469
60 Ga0105238_10278692 3300009551 Bacteria 1653
61 Ga0105238_10839092 3300009551 Bacteria 936
62 Ga0105249_10007157 3300009553 Bacteria 9740
63 Ga0099796_10103031 3300010159 Bacteria 1076
64 Ga0105239_10033079 3300010375 Bacteria 5679
65 Ga0105246_10253617 3300011119 Unclassified 1398
66 Ga0157378_10006360 3300013297 Bacteria 10333
67 Ga0157372_10165069 3300013307 Unclassified 2561
68 Ga0163163_10056638 3300014325 Bacteria 3874
69 Ga0157380_10048548 3300014326 Bacteria 3343
70 Ga0157377_10036753 3300014745 Unclassified 2695
71 Ga0163161_10161364 3300017792 Unclassified 1709
72 Ga0163161_10161838 3300017792 Bacteria 1707
73 Ga0207688_10002393 3300025901 Bacteria 10103
74 Ga0207643_10037725 3300025908 Bacteria 2712
75 Ga0207684_10298329 3300025910 Bacteria 1389
76 Ga0207662_10025635 3300025918 Bacteria 3396
77 Ga0207657_10048408 3300025919 Bacteria 3712
78 Ga0207649_10147700 3300025920 Unclassified 1615
79 Ga0207652_10251037 3300025921 Bacteria 1595
80 Ga0207659_10169719 3300025926 Unclassified 1720
81 Ga0207690_10141690 3300025932 Unclassified 1772
82 Ga0207706_10037874 3300025933 Bacteria 4280
83 Ga0207686_10015122 3300025934 Bacteria 4310
84 Ga0207709_10191771 3300025935 Bacteria 1452
85 Ga0207709_10204787 3300025935 Unclassified 1412
86 Ga0207669_10006258 3300025937 Bacteria 5425
87 Ga0207711_10244443 3300025941 Unclassified 1646
88 Ga0207689_10120073 3300025942 Unclassified 2163
89 Ga0207661_11108353 3300025944 Unclassified 729
90 Ga0207679_10261459 3300025945 Unclassified 1476
91 Ga0207668_10099471 3300025972 Unclassified 2158
92 Ga0207640_10499437 3300025981 Unclassified 1013
93 Ga0207639_10571658 3300026041 Unclassified 1040
94 Ga0207678_10008618 3300026067 Bacteria 8986
95 Ga0207708_10012428 3300026075 Bacteria 6348
96 Ga0207702_10255050 3300026078 Unclassified 1649
97 Ga0207648_10016675 3300026089 Bacteria 6703
98 Ga0207674_10008543 3300026116 Bacteria 11811
99 Ga0207675_100016727 3300026118 Bacteria 6850
100 Ga0207698_10447376 3300026142 Unclassified 1246
101 Ga0210000_1035743 3300027462 Bacteria 783
102 Ga0207428_10141718 3300027907 Unclassified 1834
103 Ga0268265_10084509 3300028380 Unclassified 2516
104 Ga0268264_10207301 3300028381 Unclassified 1797
105 Ga0307515_10407133 3300028794 Unclassified 984
106 Ga0307513_10000223 3300031456 Bacteria 82016
107 Ga0316576_10151819 3300031727 Bacteria 1746
108 Ga0307409_100183701 3300031995 Bacteria 1854
109 Ga0307415_100208090 3300032126 Bacteria 1558
110 Ga0373931_0563269 3300035691 Unclassified 741
111 Ga0439465_0063223 3300041413 Bacteria 1229
112 Ga0451789_1044559 3300041443 Bacteria 1787
113 Ga0451791_0297807 3300041451 Bacteria 1336
114 Ga0451800_0922836 3300041459 Bacteria 2514
115 Ga0451841_1434667 3300041498 Bacteria 1891
116 Ga0450915_002085 3300042119 Bacteria 1011
117 Ga0450910_030500 3300042147 Unclassified 846
118 Ga0495638_0177143 3300046460 Bacteria 1219
119 Ga0495632_0069322 3300046519 Bacteria 1698
120 Ga0495656_0105495 3300046615 Bacteria 1310
121 Ga0495658_0065909 3300046683 Unclassified 2090
122 Ga0495581_0133099 3300047315 Bacteria 1449
123 Ga0495676_0127512 3300047321 Bacteria 1842
124 Ga0496102_0028365 3300048905 Bacteria 4999
125 Ga0496108_0075316 3300048911 Bacteria 2851
126 Ga0496108_0174373 3300048911 Bacteria 1861
127 Ga0496109_0044741 3300048912 Bacteria 4016
128 Ga0496110_0230714 3300048913 Bacteria 1684
129 Ga0496111_0008334 3300048914 Bacteria 6851
130 Ga0496112_0226716 3300048915 Unclassified 1824
131 Ga0501031_0421998 3300049568 Bacteria 862
132 Ga0501032_0083738 3300049569 Bacteria 2121
133 Ga0501033_0016718 3300049570 Bacteria 5549
134 Ga0501034_0049251 3300049571 Bacteria 4252
135 Ga0501036_0003966 3300049572 Bacteria 11889
136 Ga0501036_0144535 3300049572 Bacteria 2006
137 Ga0501036_0227280 3300049572 Unclassified 1566
138 Ga0501036_0433817 3300049572 Bacteria 1095
139 Ga0501036_0475227 3300049572 Bacteria 1041
140 Ga0501036_0563683 3300049572 Bacteria 946
141 Ga0501037_0006025 3300049573 Bacteria 8849
142 Ga0501038_0102052 3300049574 Bacteria 2387
143 Ga0501038_0299083 3300049574 Bacteria 1263
144 Ga0501038_0328740 3300049574 Bacteria 1194
145 Ga0501038_0348286 3300049574 Bacteria 1154
146 Ga0501038_0470676 3300049574 Unclassified 964
147 Ga0501039_0027521 3300049575 Unclassified 4372
148 Ga0501039_0031435 3300049575 Bacteria 4093
149 Ga0501039_0043460 3300049575 Bacteria 3471
150 Ga0501039_0138423 3300049575 Bacteria 1912
151 Ga0501039_0224379 3300049575 Unclassified 1477
152 Ga0501040_0001167 3300049576 Bacteria 16709
153 Ga0501040_0140462 3300049576 Unclassified 1701
154 Ga0501040_0283624 3300049576 Bacteria 1183
155 Ga0501040_0415569 3300049576 Bacteria 967
156 Ga0501040_0748155 3300049576 Bacteria 707
157 Ga0501040_0769807 3300049576 Unclassified 696
158 Ga0501040_0782469 3300049576 Unclassified 690
159 Ga0501041_0000905 3300049577 Bacteria 16047
160 Ga0501041_0019334 3300049577 Bacteria 4067
161 Ga0501041_0052646 3300049577 Bacteria 2482
162 Ga0501042_0002024 3300049578 Bacteria 12274
163 Ga0501042_0245338 3300049578 Bacteria 1292
164 Ga0501046_0003294 3300049580 Bacteria 14836
165 Ga0501046_0082384 3300049580 Bacteria 2485
166 Ga0501046_0098231 3300049580 Bacteria 2249
167 Ga0501046_0382708 3300049580 Bacteria 1018
168 Ga0501048_0001717 3300049582 Bacteria 16705
169 Ga0501048_0143032 3300049582 Unclassified 1691
170 Ga0501048_0342410 3300049582 Bacteria 1066
171 Ga0501067_0057801 3300049583 Bacteria 2148
172 Ga0501068_0005245 3300049584 Bacteria 7075
173 Ga0501069_0018058 3300049585 Bacteria 3805
174 Ga0501069_0029506 3300049585 Bacteria 3010
175 Ga0501070_0229373 3300049586 Unclassified 1522
176 Ga0501070_0359519 3300049586 Bacteria 1181
177 Ga0501070_0372659 3300049586 Bacteria 1157
178 Ga0501071_0008477 3300049587 Bacteria 6797
179 Ga0501071_0031399 3300049587 Bacteria 3765
180 Ga0501071_0072705 3300049587 Bacteria 2508
181 Ga0501071_0120102 3300049587 Bacteria 1948
182 Ga0501071_0243655 3300049587 Bacteria 1356
183 Ga0501071_0342118 3300049587 Bacteria 1138
184 Ga0501071_0826388 3300049587 Bacteria 714
185 Ga0501072_0007889 3300049588 Bacteria 8081
186 Ga0501072_0021808 3300049588 Bacteria 4967
187 Ga0501072_0106014 3300049588 Bacteria 2235
188 Ga0501072_0141641 3300049588 Bacteria 1917
189 Ga0501072_0181890 3300049588 Unclassified 1677
190 Ga0501072_0190172 3300049588 Bacteria 1637
191 Ga0501072_0347891 3300049588 Bacteria 1177
192 Ga0501072_0401308 3300049588 Bacteria 1087
193 Ga0501073_0037087 3300049589 Unclassified 3463
194 Ga0501074_0131202 3300049590 Bacteria 1792
195 Ga0501074_0502145 3300049590 Bacteria 859
196 Ga0501075_0050699 3300049591 Bacteria 3120
197 Ga0501075_0085260 3300049591 Unclassified 2393
198 Ga0501075_0142044 3300049591 Unclassified 1830
199 Ga0501075_0203923 3300049591 Unclassified 1508
200 Ga0501075_0262372 3300049591 Bacteria 1317
201 Ga0501075_0366944 3300049591 Bacteria 1097
202 Ga0501075_0409820 3300049591 Bacteria 1033
203 Ga0501075_0443145 3300049591 Bacteria 990
204 Ga0501075_0446324 3300049591 Bacteria 986
205 Ga0501076_0003786 3300049592 Bacteria 10650
206 Ga0501076_0025768 3300049592 Bacteria 4553
207 Ga0501076_0037616 3300049592 Bacteria 3796
208 Ga0501076_0047644 3300049592 Bacteria 3389
209 Ga0501076_0106007 3300049592 Bacteria 2269
210 Ga0501076_0190266 3300049592 Bacteria 1674
211 Ga0501076_0203771 3300049592 Unclassified 1616
212 Ga0501076_0379524 3300049592 Unclassified 1162
213 Ga0501076_0789757 3300049592 Bacteria 783
214 Ga0501077_0021411 3300049593 Bacteria 4090
215 Ga0501077_0064736 3300049593 Bacteria 2319
216 Ga0501077_0073184 3300049593 Bacteria 2171
217 Ga0501077_0172292 3300049593 Unclassified 1375
218 Ga0501079_0000961 3300049741 Bacteria 19883
219 Ga0501079_0054134 3300049741 Bacteria 3095
220 Ga0501079_0220673 3300049741 Bacteria 1481
221 Ga0501079_0613524 3300049741 Unclassified 856
222 Ga0501079_0837820 3300049741 Bacteria 724
223 Ga0501080_0003631 3300049742 Bacteria 13605
224 Ga0501080_0081563 3300049742 Unclassified 3005
225 Ga0501080_0394505 3300049742 Bacteria 1246
226 Ga0501081_0001551 3300049743 Bacteria 14137
227 Ga0501081_0022692 3300049743 Bacteria 4201
228 Ga0501081_0036339 3300049743 Bacteria 3359
229 Ga0501081_0146268 3300049743 Bacteria 1696
230 Ga0501081_0236611 3300049743 Bacteria 1331
231 Ga0501081_0282430 3300049743 Bacteria 1215
232 Ga0501081_0322314 3300049743 Unclassified 1136
233 Ga0501035_0042432 3300049822 Unclassified 4103
234 Ga0501035_0972920 3300049822 Bacteria 669
235 Ga0501045_0004915 3300049824 Bacteria 9255
236 Ga0501045_0053170 3300049824 Bacteria 2959
237 Ga0501045_0056659 3300049824 Bacteria 2867
238 Ga0501045_0079012 3300049824 Bacteria 2425
239 Ga0501045_0136064 3300049824 Bacteria 1827
240 Ga0501045_0141714 3300049824 Unclassified 1787
241 Ga0501045_0548912 3300049824 Bacteria 857
242 nmdc:mga0yw44_108159_c1 3300050492 Bacteria 1779
243 nmdc:mga05p37_387010_c1 3300050507 Bacteria 1637
244 nmdc:mga05p37_404334_c1 3300050507 Bacteria 1593
245 nmdc:mga08y16_105859_c1 3300050511 Bacteria 2928
246 nmdc:mga08y16_268559_c1 3300050511 Bacteria 1761
247 nmdc:mga08y16_46311_c1 3300050511 Bacteria 4553
248 nmdc:mga0n895_192697_c1 3300050512 Unclassified 2069
249 nmdc:mga0n895_43029_c1 3300050512 Bacteria 4398
250 nmdc:mga0n895_753775_c1 3300050512 Unclassified 966
251 nmdc:mga08x19_48131_c1 3300050514 Bacteria 2730
252 nmdc:mga0a205_69544_c1 3300050515 Bacteria 3399
253 Ga0500616_0000920 3300053153 Bacteria 32166
254 Ga0500616_0001176 3300053153 Bacteria 26633
255 Ga0500620_190665 3300053155 Unclassified 703
256 Ga0501084_0003421 3300054114 Bacteria 12876
257 Ga0501084_0052709 3300054114 Bacteria 3403
258 Ga0501084_0186803 3300054114 Unclassified 1749
259 Ga0501084_0225564 3300054114 Unclassified 1581
260 Ga0501084_0256480 3300054114 Bacteria 1476
261 Ga0501084_0376887 3300054114 Bacteria 1199
262 Ga0501082_0001245 3300060353 Bacteria 22344
263 Ga0501082_0082920 3300060353 Bacteria 2766
264 Ga0501082_0117571 3300060353 Bacteria 2303
265 Ga0501082_0461991 3300060353 Bacteria 1109
266 Ga0501082_0635624 3300060353 Unclassified 934
267 Ga0530510_0008515 3300061734 Bacteria 7156
268 Ga0530510_0047040 3300061734 Unclassified 3117
269 Ga0530510_0163867 3300061734 Bacteria 1645
270 Ga0530510_0351342 3300061734 Bacteria 1107
271 Ga0530510_0378798 3300061734 Bacteria 1065
272 Ga0530510_0484206 3300061734 Unclassified 937
273 Ga0530510_0511894 3300061734 Bacteria 910
274 Ga0530510_0790611 3300061734 Bacteria 724
275 Ga0207708_10959511
276 Ga0070683_100169119
277 Ga0068869_100018405
278 Ga0070680_100323611
279 Ga0068868_100086421
280 Ga0070661_100119939
281 Ga0070692_10060722
282 Ga0070668_100082297
283 Ga0070668_100615882
284 Ga0070675_100026935
285 Ga0070674_100002978
286 Ga0070674_100313108
287 Ga0070673_100023810
288 Ga0070688_100027749
289 Ga0070701_10001640
290 Ga0070705_100094252
291 Ga0070700_100004044
292 Ga0070694_100217953
293 Ga0070694_100491616
294 Ga0070678_100094441
295 Ga0070662_100010250
296 Ga0070698_100187106
297 Ga0070698_100201401
298 Ga0070699_100010947
299 Ga0070684_100574021
300 Ga0070697_100030555
301 Ga0068853_100276365
302 Ga0070672_100410557
303 Ga0070686_100014139
304 Ga0070695_100488028
305 Ga0070693_100003008
306 Ga0070704_100028854
307 Ga0070664_100099314
308 Ga0068857_100058437
309 Ga0068854_100094724
310 Ga0070702_100123119
311 Ga0068859_100077694
312 Ga0068870_10042787
313 Ga0068870_10234331
314 Ga0068863_100092392
315 Ga0068860_100024510
316 Ga0068862_100022388
317 Ga0075365_10153535
318 Ga0075431_100132559
319 Ga0075433_10100890
320 Ga0068865_100018583
321 Ga0097620_100077691
322 Ga0111539_10035961
323 Ga0111539_10260543
324 Ga0111539_10923761
325 Ga0105245_10095491
326 Ga0105247_10050059
327 Ga0114129_10072007
328 Ga0114129_10497366
329 Ga0105243_10059702
330 Ga0105243_10419707
331 Ga0105243_10585602
332 Ga0105242_10031070
333 Ga0105242_10098865
334 Ga0105238_10278692
335 Ga0105238_10839092
336 Ga0105249_10007157
337 Ga0099796_10103031
338 Ga0105239_10033079
339 Ga0105246_10253617
340 Ga0157378_10006360
341 Ga0157372_10165069
342 Ga0163163_10056638
343 Ga0157380_10048548
344 Ga0157377_10036753
345 Ga0163161_10161364
346 Ga0163161_10161838
347 Ga0207688_10002393
348 Ga0207643_10037725
349 Ga0207684_10298329
350 Ga0207662_10025635
351 Ga0207657_10048408
352 Ga0207649_10147700
353 Ga0207652_10251037
354 Ga0207659_10169719
355 Ga0207690_10141690
356 Ga0207706_10037874
357 Ga0207686_10015122
358 Ga0207709_10191771
359 Ga0207709_10204787
360 Ga0207669_10006258
361 Ga0207711_10244443
362 Ga0207689_10120073
363 Ga0207661_11108353
364 Ga0207679_10261459
365 Ga0207668_10099471
366 Ga0207640_10499437
367 Ga0207639_10571658
368 Ga0207678_10008618
369 Ga0207708_10012428
370 Ga0207702_10255050
371 Ga0207648_10016675
372 Ga0207674_10008543
373 Ga0207675_100016727
374 Ga0207698_10447376
375 Ga0210000_1035743
376 Ga0207428_10141718
377 Ga0268265_10084509
378 Ga0268264_10207301
379 Ga0307515_10407133
380 Ga0307513_10000223
381 Ga0316576_10151819
382 Ga0307409_100183701
383 Ga0307415_100208090
384 Ga0373931_0563269
385 Ga0439465_0063223
386 Ga0451789_1044559
387 Ga0451791_0297807
388 Ga0451800_0922836
389 Ga0451841_1434667
390 Ga0450915_002085
391 Ga0450910_030500
392 Ga0495638_0177143
393 Ga0495632_0069322
394 Ga0495656_0105495
395 Ga0495658_0065909
396 Ga0495581_0133099
397 Ga0495676_0127512
398 Ga0496102_0028365
399 Ga0496108_0075316
400 Ga0496108_0174373
401 Ga0496109_0044741
402 Ga0496110_0230714
403 Ga0496111_0008334
404 Ga0496112_0226716
405 Ga0501031_0421998
406 Ga0501032_0083738
407 Ga0501033_0016718
408 Ga0501034_0049251
409 Ga0501036_0003966
410 Ga0501036_0144535
411 Ga0501036_0227280
412 Ga0501036_0433817
413 Ga0501036_0475227
414 Ga0501036_0563683
415 Ga0501037_0006025
416 Ga0501038_0102052
417 Ga0501038_0299083
418 Ga0501038_0328740
419 Ga0501038_0348286
420 Ga0501038_0470676
421 Ga0501039_0027521
422 Ga0501039_0031435
423 Ga0501039_0043460
424 Ga0501039_0138423
425 Ga0501039_0224379
426 Ga0501040_0001167
427 Ga0501040_0140462
428 Ga0501040_0283624
429 Ga0501040_0415569
430 Ga0501040_0748155
431 Ga0501040_0769807
432 Ga0501040_0782469
433 Ga0501041_0000905
434 Ga0501041_0019334
435 Ga0501041_0052646
436 Ga0501042_0002024
437 Ga0501042_0245338
438 Ga0501046_0003294
439 Ga0501046_0082384
440 Ga0501046_0098231
441 Ga0501046_0382708
442 Ga0501048_0001717
443 Ga0501048_0143032
444 Ga0501048_0342410
445 Ga0501067_0057801
446 Ga0501068_0005245
447 Ga0501069_0018058
448 Ga0501069_0029506
449 Ga0501070_0229373
450 Ga0501070_0359519
451 Ga0501070_0372659
452 Ga0501071_0008477
453 Ga0501071_0031399
454 Ga0501071_0072705
455 Ga0501071_0120102
456 Ga0501071_0243655
457 Ga0501071_0342118
458 Ga0501071_0826388
459 Ga0501072_0007889
460 Ga0501072_0021808
461 Ga0501072_0106014
462 Ga0501072_0141641
463 Ga0501072_0181890
464 Ga0501072_0190172
465 Ga0501072_0347891
466 Ga0501072_0401308
467 Ga0501073_0037087
468 Ga0501074_0131202
469 Ga0501074_0502145
470 Ga0501075_0050699
471 Ga0501075_0085260
472 Ga0501075_0142044
473 Ga0501075_0203923
474 Ga0501075_0262372
475 Ga0501075_0366944
476 Ga0501075_0409820
477 Ga0501075_0443145
478 Ga0501075_0446324
479 Ga0501076_0003786
480 Ga0501076_0025768
481 Ga0501076_0037616
482 Ga0501076_0047644
483 Ga0501076_0106007
484 Ga0501076_0190266
485 Ga0501076_0203771
486 Ga0501076_0379524
487 Ga0501076_0789757
488 Ga0501077_0021411
489 Ga0501077_0064736
490 Ga0501077_0073184
491 Ga0501077_0172292
492 Ga0501079_0000961
493 Ga0501079_0054134
494 Ga0501079_0220673
495 Ga0501079_0613524
496 Ga0501079_0837820
497 Ga0501080_0003631
498 Ga0501080_0081563
499 Ga0501080_0394505
500 Ga0501081_0001551
501 Ga0501081_0022692
502 Ga0501081_0036339
503 Ga0501081_0146268
504 Ga0501081_0236611
505 Ga0501081_0282430
506 Ga0501081_0322314
507 Ga0501035_0042432
508 Ga0501035_0972920
509 Ga0501045_0004915
510 Ga0501045_0053170
511 Ga0501045_0056659
512 Ga0501045_0079012
513 Ga0501045_0136064
514 Ga0501045_0141714
515 Ga0501045_0548912
516 nmdc:mga0yw44_108159_c1
517 nmdc:mga05p37_387010_c1
518 nmdc:mga05p37_404334_c1
519 nmdc:mga08y16_105859_c1
520 nmdc:mga08y16_268559_c1
521 nmdc:mga08y16_46311_c1
522 nmdc:mga0n895_192697_c1
523 nmdc:mga0n895_43029_c1
524 nmdc:mga0n895_753775_c1
525 nmdc:mga08x19_48131_c1
526 nmdc:mga0a205_69544_c1
527 Ga0500616_0000920
528 Ga0500616_0001176
529 Ga0500620_190665
530 Ga0501084_0003421
531 Ga0501084_0052709
532 Ga0501084_0186803
533 Ga0501084_0225564
534 Ga0501084_0256480
535 Ga0501084_0376887
536 Ga0501082_0001245
537 Ga0501082_0082920
538 Ga0501082_0117571
539 Ga0501082_0461991
540 Ga0501082_0635624
541 Ga0530510_0008515
542 Ga0530510_0047040
543 Ga0530510_0163867
544 Ga0530510_0351342
545 Ga0530510_0378798
546 Ga0530510_0484206
547 Ga0530510_0511894
548 Ga0530510_0790611

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

10

56

0.98

PF13977

TetR_C_6

BetI-type transcriptional repressor, C-terminal

83

194

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kwa-assembly1.cif.gz_B crystal structure of a putative transcriptional regulator from saccharomonospora viridis in complex with choline 0.8614 32 217
3crj-assembly1.cif.gz_B crystal structure of a tetr transcription regulator from haloarcula marismortui atcc 43049 0.8606 32 218
3crj-assembly2.cif.gz_C crystal structure of a tetr transcription regulator from haloarcula marismortui atcc 43049 0.857 34 217
5vl9-assembly2.cif.gz_C crystal structure of eilr in complex with eilo dna element 0.8525 28 218
2nx4-assembly2.cif.gz_D the crystal structure of athe putative tetr-family transcriptional regulator rha06780 from rhodococcus sp. rha1. 0.8447 32 206
ID Description Score Start End Superfamily
3whbA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9351 36 76 1.10.10.60
3whcE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9327 36 76 1.10.10.60
5ojxA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9264 35 84 1.10.10.60
3whcC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9211 34 76 1.10.10.60
3whcD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.917 36 76 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A6J7BTQ3-F1-model_v4 Unannotated protein 0.9542 27 225 GO:0000976
GO:0003700
AF-A0A117IVU2-F1-model_v4 TetR family transcriptional regulator 0.9468 25 221 GO:0000976
GO:0003700
AF-A0A6J7BTQ3-F1-model_v4 Unannotated protein 0.945 27 225 GO:0000976
GO:0003700
AF-A0A6J6M692-F1-model_v4 Unannotated protein 0.9326 27 225 GO:0000976
GO:0003700
AF-A0A117IVU2-F1-model_v4 TetR family transcriptional regulator 0.9287 25 221 GO:0000976
GO:0003700

Map