F379606

General Info

Members Datasets Scaffolds Average Seq Length
274 203 548 410

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100027741|Ga0068861_1000277413
Length 426
Sequence MAISNSSWARAVADGERLVIDHVGHHGDGVAIAGGGNIYVPYTLGGETVDVDTVPGHHPDRRRLLKVETASAERIAPFCPHFGVCGGCAIQHWDAAPYSAWKREFVVTTLAQAGIDCDVAPLVDAHGAGRRRITLHGRMGTHDVLKVGYAAAGSHDIIPIDRCPILDPHLDGAIEVAWAIAEPLISIGKPLDIQITATNSGLDVDVRGSGPLSTALITRLSRIAEEHRLARLTRHGELVLMRTPPVISIGAAQVALPPGSFLQATVAGEETLAALVSEHCKRGKHIADLFCGVGPFALRLAAKSRVTAFDSDAGAVAALQKAATSTSGLKPLKAEARDLFRRPLMPQELRDYDTVVFDPPRQGAQAQATQFAASKVPTVVAVSCNVTTFARDAKILIDGGYKIDGITPVDQFRHTPHVELVARFRR

Samples

Sample ID Description Type Environment
1 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
97 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
98 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
100 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
101 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
102 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
176 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
177 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
181 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
182 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
183 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
184 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
185 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
186 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
187 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
188 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
189 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
190 2791355199
191 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
192 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
193 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
194 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
195 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
196 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
197 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
198 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
199 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
200 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
201 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
202 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
203 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.77
Metatranscriptomes 0
Isolates 6.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.76
Nodule 4.74
Rhizoplane 6.93
Rhizosphere 70.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068861_100027741 3300005719 Bacteria 4128
2 Ga0070658_10221268 3300005327 Bacteria 1601
3 Ga0070670_100064509 3300005331 Bacteria 3143
4 Ga0070666_10061936 3300005335 Bacteria 2534
5 Ga0070680_100163319 3300005336 Bacteria 1872
6 Ga0070689_100131023 3300005340 Bacteria 2011
7 Ga0070671_100036389 3300005355 Bacteria 4082
8 Ga0070671_100224271 3300005355 Bacteria 1595
9 Ga0070714_100062126 3300005435 Bacteria 3210
10 Ga0070710_10001159 3300005437 Bacteria 12475
11 Ga0070663_100007429 3300005455 Bacteria 6667
12 Ga0070663_100023081 3300005455 Bacteria 4165
13 Ga0070663_100100217 3300005455 Bacteria 2161
14 Ga0070678_100083890 3300005456 Bacteria 2423
15 Ga0070681_10024796 3300005458 Bacteria 6033
16 Ga0070681_10083877 3300005458 Bacteria 3139
17 Ga0068853_100081681 3300005539 Bacteria 2830
18 Ga0068853_100097148 3300005539 Bacteria 2600
19 Ga0070665_100031480 3300005548 Bacteria 5339
20 Ga0070665_100053304 3300005548 Bacteria 4056
21 Ga0068855_100010142 3300005563 Bacteria 11353
22 Ga0068855_100100282 3300005563 Bacteria 3334
23 Ga0068857_100007716 3300005577 Bacteria 9273
24 Ga0068856_100037113 3300005614 Bacteria 4780
25 Ga0068856_100193125 3300005614 Bacteria 2050
26 Ga0070702_100084147 3300005615 Bacteria 1912
27 Ga0068852_100041030 3300005616 Bacteria 3908
28 Ga0068859_100263631 3300005617 Bacteria 1814
29 Ga0068863_100093624 3300005841 Bacteria 2851
30 Ga0068858_100100079 3300005842 Bacteria 2703
31 Ga0068860_100000101 3300005843 Bacteria 142856
32 Ga0068860_100083036 3300005843 Bacteria 3046
33 Ga0081455_10011564 3300005937 Bacteria 8858
34 Ga0081540_1003262 3300005983 Bacteria 12891
35 Ga0081540_1014536 3300005983 Bacteria 5034
36 Ga0081540_1016848 3300005983 Bacteria 4551
37 Ga0081540_1018572 3300005983 Bacteria 4259
38 Ga0081539_10000199 3300005985 Bacteria 139305
39 Ga0075365_10103950 3300006038 Bacteria 1947
40 Ga0075363_100057582 3300006048 Bacteria 2086
41 Ga0070712_100016142 3300006175 Bacteria 4820
42 Ga0075367_10054630 3300006178 Bacteria 2368
43 Ga0075366_10121713 3300006195 Bacteria 1573
44 Ga0068871_100013006 3300006358 Bacteria 6165
45 Ga0068871_100176248 3300006358 Bacteria 1835
46 Ga0075434_100133722 3300006871 Bacteria 2500
47 Ga0097620_100263639 3300006931 Bacteria 1814
48 Ga0099794_10004750 3300007265 Bacteria 5382
49 Ga0105240_10032506 3300009093 Bacteria 6755
50 Ga0105245_10011127 3300009098 Bacteria 7831
51 Ga0105245_10016868 3300009098 Bacteria 6375
52 Ga0114129_10103343 3300009147 Bacteria 3939
53 Ga0105241_10029647 3300009174 Bacteria 4084
54 Ga0105248_10084071 3300009177 Bacteria 3580
55 Ga0105237_10054501 3300009545 Bacteria 4007
56 Ga0105239_10279555 3300010375 Bacteria 1879
57 Ga0105239_10346317 3300010375 Bacteria 1677
58 Ga0105239_10401748 3300010375 Bacteria 1551
59 Ga0105239_10405461 3300010375 Bacteria 1543
60 Ga0105246_10011898 3300011119 Bacteria 5412
61 Ga0157369_10020707 3300013105 Bacteria 7353
62 Ga0157374_10044960 3300013296 Bacteria 4085
63 Ga0163162_10031760 3300013306 Bacteria 5239
64 Ga0157375_10008782 3300013308 Bacteria 8855
65 Ga0157375_10313423 3300013308 Bacteria 1733
66 Ga0163163_10020187 3300014325 Bacteria 6271
67 Ga0163163_10090714 3300014325 Bacteria 3070
68 Ga0157379_10082727 3300014968 Bacteria 2876
69 Ga0213872_10029655 3300021361 Bacteria 2509
70 Ga0213876_10002386 3300021384 Bacteria 11055
71 Ga0213871_10001561 3300021441 Bacteria 3887
72 Ga0209758_1003178 3300025297 Bacteria 15387
73 Ga0209758_1014636 3300025297 Bacteria 4152
74 Ga0207697_10039601 3300025315 Bacteria 1934
75 Ga0207688_10087832 3300025901 Bacteria 1782
76 Ga0207647_10003122 3300025904 Bacteria 12444
77 Ga0207643_10069540 3300025908 Bacteria 2024
78 Ga0207707_10022299 3300025912 Bacteria 5537
79 Ga0207707_10080080 3300025912 Bacteria 2852
80 Ga0207695_10148124 3300025913 Bacteria 2289
81 Ga0207671_10058612 3300025914 Bacteria 2855
82 Ga0207693_10051713 3300025915 Bacteria 3223
83 Ga0207663_10018526 3300025916 Bacteria 3904
84 Ga0207660_10006085 3300025917 Bacteria 7831
85 Ga0207657_10002700 3300025919 Bacteria 19128
86 Ga0207694_10056859 3300025924 Bacteria 3039
87 Ga0207694_10127402 3300025924 Bacteria 2038
88 Ga0207664_10018761 3300025929 Bacteria 5102
89 Ga0207644_10074360 3300025931 Bacteria 2494
90 Ga0207665_10014167 3300025939 Bacteria 5245
91 Ga0207691_10281282 3300025940 Bacteria 1431
92 Ga0207711_10080426 3300025941 Bacteria 2846
93 Ga0207689_10029894 3300025942 Bacteria 4543
94 Ga0207689_10064521 3300025942 Bacteria 3013
95 Ga0207689_10221092 3300025942 Bacteria 1565
96 Ga0207679_10076779 3300025945 Bacteria 2539
97 Ga0207667_10010882 3300025949 Bacteria 10609
98 Ga0207668_10045470 3300025972 Bacteria 2994
99 Ga0207677_10087289 3300026023 Bacteria 2258
100 Ga0207677_10194268 3300026023 Bacteria 1608
101 Ga0207703_10053309 3300026035 Bacteria 3287
102 Ga0207639_10035687 3300026041 Bacteria 3680
103 Ga0207639_10096838 3300026041 Bacteria 2375
104 Ga0207639_10106811 3300026041 Bacteria 2273
105 Ga0207678_10018630 3300026067 Bacteria 6094
106 Ga0207678_10041308 3300026067 Bacteria 3999
107 Ga0207678_10089150 3300026067 Bacteria 2636
108 Ga0207678_10096451 3300026067 Bacteria 2527
109 Ga0207678_10106913 3300026067 Bacteria 2387
110 Ga0207641_10122812 3300026088 Bacteria 2320
111 Ga0207674_10008031 3300026116 Bacteria 12231
112 Ga0207674_10218542 3300026116 Bacteria 1854
113 Ga0207675_100062798 3300026118 Bacteria 3470
114 Ga0207675_100346667 3300026118 Bacteria 1455
115 Ga0207683_10018476 3300026121 Bacteria 5951
116 Ga0207683_10019717 3300026121 Bacteria 5762
117 Ga0207683_10067537 3300026121 Bacteria 3154
118 Ga0207698_10017361 3300026142 Bacteria 4879
119 Ga0207698_10071883 3300026142 Bacteria 2747
120 Ga0209588_1000499 3300027671 Bacteria 10047
121 Ga0209588_1011447 3300027671 Bacteria 2680
122 Ga0268266_10002993 3300028379 Bacteria 17411
123 Ga0268266_10016781 3300028379 Bacteria 6259
124 Ga0268266_10116812 3300028379 Bacteria 2370
125 Ga0268265_10052898 3300028380 Bacteria 3073
126 Ga0268265_10257243 3300028380 Bacteria 1550
127 Ga0268264_10000030 3300028381 Bacteria 418542
128 Ga0307517_10104425 3300028786 Bacteria 2207
129 Ga0265340_10023276 3300031247 Bacteria 3160
130 Ga0265339_10011293 3300031249 Bacteria 5508
131 Ga0307509_10068025 3300031507 Bacteria 3728
132 Ga0265314_10087062 3300031711 Bacteria 2043
133 Ga0265342_10017850 3300031712 Bacteria 4606
134 Ga0307516_10145972 3300031730 Bacteria 2131
135 Ga0307415_100028863 3300032126 Bacteria 3537
136 Ga0307415_100069955 3300032126 Bacteria 2463
137 Ga0307507_10007677 3300033179 Bacteria 15449
138 Ga0307510_10024689 3300033180 Bacteria 6943
139 Ga0307510_10052296 3300033180 Bacteria 4308
140 Ga0373923_0002765 3300035111 Bacteria 5481
141 Ga0373953_0004043 3300035117 Bacteria 4636
142 Ga0373954_0007936 3300035118 Bacteria 4650
143 Ga0373956_0014797 3300035119 Bacteria 3262
144 Ga0373924_0003083 3300035410 Bacteria 5689
145 Ga0373931_0110729 3300035691 Bacteria 1558
146 Ga0373935_0035466 3300035692 Bacteria 3114
147 Ga0373927_0014122 3300035695 Bacteria 5296
148 Ga0373933_0000342 3300035724 Bacteria 29960
149 Ga0373933_0007801 3300035724 Bacteria 5847
150 Ga0373947_0010871 3300035725 Bacteria 5224
151 Ga0373937_0024360 3300036401 Bacteria 5457
152 Ga0373925_0054307 3300037068 Bacteria 2996
153 Ga0373925_0086453 3300037068 Bacteria 2392
154 Ga0395905_0082234 3300037471 Bacteria 3018
155 Ga0395901_0136742 3300038443 Bacteria 2575
156 Ga0436365_0680591 3300039437 Bacteria 1710
157 Ga0436362_0035727 3300039453 Bacteria 3821
158 Ga0436362_0914417 3300039453 Bacteria 3635
159 Ga0466959_0113870 3300045049 Bacteria 1928
160 Ga0495592_0012012 3300046454 Bacteria 6562
161 Ga0495603_0003046 3300046455 Bacteria 9937
162 Ga0495603_0013820 3300046455 Bacteria 4886
163 Ga0495603_0014368 3300046455 Bacteria 4788
164 Ga0495603_0132609 3300046455 Bacteria 1450
165 Ga0495629_0000439 3300046459 Bacteria 34692
166 Ga0495638_0082157 3300046460 Bacteria 1954
167 Ga0495585_0041764 3300046492 Bacteria 2571
168 Ga0495606_0069982 3300046507 Bacteria 2215
169 Ga0495606_0077306 3300046507 Bacteria 2078
170 Ga0495608_0009342 3300046511 Bacteria 6855
171 Ga0495616_0094097 3300046513 Bacteria 1414
172 Ga0495618_0054714 3300046514 Bacteria 2526
173 Ga0495652_0042026 3300046529 Bacteria 3942
174 Ga0495640_0015529 3300046533 Bacteria 5727
175 Ga0495645_0007838 3300046543 Bacteria 7432
176 Ga0495622_0037460 3300046557 Bacteria 2259
177 Ga0495667_0003416 3300046559 Bacteria 10642
178 Ga0495625_0147614 3300046660 Bacteria 1582
179 Ga0495635_0009930 3300046663 Bacteria 6653
180 Ga0495588_0055957 3300046674 Bacteria 2036
181 Ga0495599_0001369 3300046678 Bacteria 13928
182 Ga0495646_0028973 3300046680 Bacteria 3464
183 Ga0495671_0100562 3300046692 Bacteria 1414
184 Ga0495589_0111953 3300046794 Bacteria 1317
185 Ga0495600_0137316 3300046809 Bacteria 1587
186 Ga0495683_0015789 3300047323 Bacteria 3921
187 Ga0495684_0007607 3300047471 Bacteria 8383
188 Ga0495593_0000687 3300047673 Bacteria 19500
189 Ga0496100_0015649 3300048903 Bacteria 4433
190 Ga0496101_0004392 3300048904 Bacteria 8864
191 Ga0496101_0171444 3300048904 Bacteria 1668
192 Ga0496102_0013777 3300048905 Bacteria 7013
193 Ga0496103_0027704 3300048906 Bacteria 3435
194 Ga0496104_0049009 3300048907 Bacteria 3983
195 Ga0496106_0000740 3300048909 Bacteria 23552
196 Ga0496106_0018748 3300048909 Bacteria 5124
197 Ga0496107_0002930 3300048910 Bacteria 11282
198 Ga0496109_0011665 3300048912 Bacteria 7557
199 Ga0496109_0121442 3300048912 Bacteria 2434
200 Ga0496109_0190895 3300048912 Bacteria 1925
201 Ga0496110_0003174 3300048913 Bacteria 12507
202 Ga0496110_0006994 3300048913 Bacteria 8975
203 Ga0496110_0289425 3300048913 Bacteria 1492
204 Ga0496110_0324500 3300048913 Bacteria 1402
205 Ga0496112_0067674 3300048915 Bacteria 3525
206 Ga0496115_0003730 3300048918 Bacteria 10956
207 Ga0496115_0034314 3300048918 Bacteria 4010
208 Ga0496117_0005455 3300048920 Bacteria 13342
209 Ga0496117_0100348 3300048920 Bacteria 1834
210 Ga0496118_0001758 3300048921 Bacteria 31406
211 Ga0496121_0004013 3300048924 Bacteria 20280
212 Ga0496121_0251610 3300048924 Bacteria 1225
213 Ga0496124_0001073 3300048927 Bacteria 43225
214 Ga0496126_0029128 3300048929 Bacteria 5248
215 Ga0496126_0046563 3300048929 Bacteria 3976
216 Ga0496126_0055412 3300048929 Bacteria 3587
217 Ga0496126_0069100 3300048929 Bacteria 3152
218 Ga0496126_0102819 3300048929 Bacteria 2497
219 Ga0501032_0031770 3300049569 Bacteria 3619
220 Ga0501034_0034695 3300049571 Bacteria 5115
221 Ga0501036_0001657 3300049572 Bacteria 17249
222 Ga0501037_0009558 3300049573 Bacteria 7118
223 Ga0501038_0111084 3300049574 Bacteria 2271
224 Ga0501043_0002225 3300049579 Bacteria 16540
225 Ga0501046_0047306 3300049580 Bacteria 3410
226 Ga0501046_0093846 3300049580 Bacteria 2306
227 Ga0501047_0000314 3300049581 Bacteria 55906
228 Ga0501047_0288081 3300049581 Bacteria 1486
229 Ga0501048_0002000 3300049582 Bacteria 15488
230 Ga0501070_0041798 3300049586 Bacteria 3817
231 Ga0501080_0057579 3300049742 Bacteria 3618
232 Ga0501080_0066728 3300049742 Bacteria 3346
233 Ga0501083_0001743 3300049744 Bacteria 14830
234 Ga0501044_0000565 3300049823 Bacteria 45019
235 Ga0501044_0099393 3300049823 Bacteria 2928
236 nmdc:mga03683_15914_c1 3300050489 Bacteria 2816
237 nmdc:mga0k408_45189_c1 3300050493 Bacteria 2541
238 nmdc:mga0k408_46943_c1 3300050493 Bacteria 2495
239 nmdc:mga05p37_102734_c1 3300050507 Bacteria 3519
240 Ga0500635_0011133 3300053080 Bacteria 2549
241 Ga0495595_0004450 3300053084 Bacteria 5640
242 Ga0495619_0001280 3300053085 Bacteria 16510
243 Ga0500641_0020678 3300053096 Bacteria 2500
244 Ga0500554_001571 3300053102 Bacteria 4401
245 Ga0500595_001395 3300053119 Bacteria 12953
246 Ga0500559_0086918 3300053136 Bacteria 1427
247 Ga0500568_0007172 3300053139 Bacteria 5498
248 Ga0500573_0079137 3300053140 Bacteria 1869
249 Ga0500590_061917 3300053148 Bacteria 1878
250 Ga0500603_000328 3300053150 Bacteria 12422
251 Ga0500638_000968 3300053162 Bacteria 8225
252 Ga0500639_019923 3300053163 Bacteria 3536
253 Ga0500639_065314 3300053163 Bacteria 1867
254 Ga0500637_0000262 3300053178 Bacteria 19711
255 Ga0500637_0001994 3300053178 Bacteria 8887
256 Ga0500637_0051276 3300053178 Bacteria 2352
257 2513693051 2513237101 Bacteria 7952346
258 2513887304 2513237141 Bacteria 8496279
259 2524464976 2524023210 Bacteria 9029266
260 2723843313 2721755755 Bacteria 8322773
261 2793080693
262 2874611799 2874604998 Bacteria 7834745
263 2879110882 2879110137 Bacteria 8907982
264 2885390526 2885383462 Bacteria 9473874
265 2889037632 2889033259 Bacteria 9099371
266 2922361591 2922361189 Bacteria 7436256
267 2922387183 2922386360 Bacteria 7017218
268 3003671424 3003665799 Bacteria 7279786
269 8006972355 8006964411 Bacteria 8966052
270 8006985038 8006984368 Bacteria 9651211
271 8006999752 8006994254 Bacteria 8309700
272 8056678766 8056673599 Bacteria 7871253
273 8056687839 8056681323 Bacteria 8472857
274 8056690502 8056689827 Bacteria 6712655
275 Ga0068861_100027741
276 Ga0070658_10221268
277 Ga0070670_100064509
278 Ga0070666_10061936
279 Ga0070680_100163319
280 Ga0070689_100131023
281 Ga0070671_100036389
282 Ga0070671_100224271
283 Ga0070714_100062126
284 Ga0070710_10001159
285 Ga0070663_100007429
286 Ga0070663_100023081
287 Ga0070663_100100217
288 Ga0070678_100083890
289 Ga0070681_10024796
290 Ga0070681_10083877
291 Ga0068853_100081681
292 Ga0068853_100097148
293 Ga0070665_100031480
294 Ga0070665_100053304
295 Ga0068855_100010142
296 Ga0068855_100100282
297 Ga0068857_100007716
298 Ga0068856_100037113
299 Ga0068856_100193125
300 Ga0070702_100084147
301 Ga0068852_100041030
302 Ga0068859_100263631
303 Ga0068863_100093624
304 Ga0068858_100100079
305 Ga0068860_100000101
306 Ga0068860_100083036
307 Ga0081455_10011564
308 Ga0081540_1003262
309 Ga0081540_1014536
310 Ga0081540_1016848
311 Ga0081540_1018572
312 Ga0081539_10000199
313 Ga0075365_10103950
314 Ga0075363_100057582
315 Ga0070712_100016142
316 Ga0075367_10054630
317 Ga0075366_10121713
318 Ga0068871_100013006
319 Ga0068871_100176248
320 Ga0075434_100133722
321 Ga0097620_100263639
322 Ga0099794_10004750
323 Ga0105240_10032506
324 Ga0105245_10011127
325 Ga0105245_10016868
326 Ga0114129_10103343
327 Ga0105241_10029647
328 Ga0105248_10084071
329 Ga0105237_10054501
330 Ga0105239_10279555
331 Ga0105239_10346317
332 Ga0105239_10401748
333 Ga0105239_10405461
334 Ga0105246_10011898
335 Ga0157369_10020707
336 Ga0157374_10044960
337 Ga0163162_10031760
338 Ga0157375_10008782
339 Ga0157375_10313423
340 Ga0163163_10020187
341 Ga0163163_10090714
342 Ga0157379_10082727
343 Ga0213872_10029655
344 Ga0213876_10002386
345 Ga0213871_10001561
346 Ga0209758_1003178
347 Ga0209758_1014636
348 Ga0207697_10039601
349 Ga0207688_10087832
350 Ga0207647_10003122
351 Ga0207643_10069540
352 Ga0207707_10022299
353 Ga0207707_10080080
354 Ga0207695_10148124
355 Ga0207671_10058612
356 Ga0207693_10051713
357 Ga0207663_10018526
358 Ga0207660_10006085
359 Ga0207657_10002700
360 Ga0207694_10056859
361 Ga0207694_10127402
362 Ga0207664_10018761
363 Ga0207644_10074360
364 Ga0207665_10014167
365 Ga0207691_10281282
366 Ga0207711_10080426
367 Ga0207689_10029894
368 Ga0207689_10064521
369 Ga0207689_10221092
370 Ga0207679_10076779
371 Ga0207667_10010882
372 Ga0207668_10045470
373 Ga0207677_10087289
374 Ga0207677_10194268
375 Ga0207703_10053309
376 Ga0207639_10035687
377 Ga0207639_10096838
378 Ga0207639_10106811
379 Ga0207678_10018630
380 Ga0207678_10041308
381 Ga0207678_10089150
382 Ga0207678_10096451
383 Ga0207678_10106913
384 Ga0207641_10122812
385 Ga0207674_10008031
386 Ga0207674_10218542
387 Ga0207675_100062798
388 Ga0207675_100346667
389 Ga0207683_10018476
390 Ga0207683_10019717
391 Ga0207683_10067537
392 Ga0207698_10017361
393 Ga0207698_10071883
394 Ga0209588_1000499
395 Ga0209588_1011447
396 Ga0268266_10002993
397 Ga0268266_10016781
398 Ga0268266_10116812
399 Ga0268265_10052898
400 Ga0268265_10257243
401 Ga0268264_10000030
402 Ga0307517_10104425
403 Ga0265340_10023276
404 Ga0265339_10011293
405 Ga0307509_10068025
406 Ga0265314_10087062
407 Ga0265342_10017850
408 Ga0307516_10145972
409 Ga0307415_100028863
410 Ga0307415_100069955
411 Ga0307507_10007677
412 Ga0307510_10024689
413 Ga0307510_10052296
414 Ga0373923_0002765
415 Ga0373953_0004043
416 Ga0373954_0007936
417 Ga0373956_0014797
418 Ga0373924_0003083
419 Ga0373931_0110729
420 Ga0373935_0035466
421 Ga0373927_0014122
422 Ga0373933_0000342
423 Ga0373933_0007801
424 Ga0373947_0010871
425 Ga0373937_0024360
426 Ga0373925_0054307
427 Ga0373925_0086453
428 Ga0395905_0082234
429 Ga0395901_0136742
430 Ga0436365_0680591
431 Ga0436362_0035727
432 Ga0436362_0914417
433 Ga0466959_0113870
434 Ga0495592_0012012
435 Ga0495603_0003046
436 Ga0495603_0013820
437 Ga0495603_0014368
438 Ga0495603_0132609
439 Ga0495629_0000439
440 Ga0495638_0082157
441 Ga0495585_0041764
442 Ga0495606_0069982
443 Ga0495606_0077306
444 Ga0495608_0009342
445 Ga0495616_0094097
446 Ga0495618_0054714
447 Ga0495652_0042026
448 Ga0495640_0015529
449 Ga0495645_0007838
450 Ga0495622_0037460
451 Ga0495667_0003416
452 Ga0495625_0147614
453 Ga0495635_0009930
454 Ga0495588_0055957
455 Ga0495599_0001369
456 Ga0495646_0028973
457 Ga0495671_0100562
458 Ga0495589_0111953
459 Ga0495600_0137316
460 Ga0495683_0015789
461 Ga0495684_0007607
462 Ga0495593_0000687
463 Ga0496100_0015649
464 Ga0496101_0004392
465 Ga0496101_0171444
466 Ga0496102_0013777
467 Ga0496103_0027704
468 Ga0496104_0049009
469 Ga0496106_0000740
470 Ga0496106_0018748
471 Ga0496107_0002930
472 Ga0496109_0011665
473 Ga0496109_0121442
474 Ga0496109_0190895
475 Ga0496110_0003174
476 Ga0496110_0006994
477 Ga0496110_0289425
478 Ga0496110_0324500
479 Ga0496112_0067674
480 Ga0496115_0003730
481 Ga0496115_0034314
482 Ga0496117_0005455
483 Ga0496117_0100348
484 Ga0496118_0001758
485 Ga0496121_0004013
486 Ga0496121_0251610
487 Ga0496124_0001073
488 Ga0496126_0029128
489 Ga0496126_0046563
490 Ga0496126_0055412
491 Ga0496126_0069100
492 Ga0496126_0102819
493 Ga0501032_0031770
494 Ga0501034_0034695
495 Ga0501036_0001657
496 Ga0501037_0009558
497 Ga0501038_0111084
498 Ga0501043_0002225
499 Ga0501046_0047306
500 Ga0501046_0093846
501 Ga0501047_0000314
502 Ga0501047_0288081
503 Ga0501048_0002000
504 Ga0501070_0041798
505 Ga0501080_0057579
506 Ga0501080_0066728
507 Ga0501083_0001743
508 Ga0501044_0000565
509 Ga0501044_0099393
510 nmdc:mga03683_15914_c1
511 nmdc:mga0k408_45189_c1
512 nmdc:mga0k408_46943_c1
513 nmdc:mga05p37_102734_c1
514 Ga0500635_0011133
515 Ga0495595_0004450
516 Ga0495619_0001280
517 Ga0500641_0020678
518 Ga0500554_001571
519 Ga0500595_001395
520 Ga0500559_0086918
521 Ga0500568_0007172
522 Ga0500573_0079137
523 Ga0500590_061917
524 Ga0500603_000328
525 Ga0500638_000968
526 Ga0500639_019923
527 Ga0500639_065314
528 Ga0500637_0000262
529 Ga0500637_0001994
530 Ga0500637_0051276
531 2513693051
532 2513887304
533 2524464976
534 2723843313
535 2793080693
536 2874611799
537 2879110882
538 2885390526
539 2889037632
540 2922361591
541 2922387183
542 3003671424
543 8006972355
544 8006985038
545 8006999752
546 8056678766
547 8056687839
548 8056690502

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05175

MTS

Methyltransferase small domain

253

377

0.74

PF05958

tRNA_U5-meth_tr

tRNA (Uracil-5-)-methyltransferase

256

423

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.8717 1 411
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.8697 1 411
1uwv-assembly1.cif.gz_A crystal structure of ruma, the iron-sulfur cluster containing e. coli 23s ribosomal rna 5-methyluridine methyltransferase 0.8522 1 411
5xj1-assembly1.cif.gz_A crystal structure of sprlmcd 0.8514 1 410
1uwv-assembly1.cif.gz_A crystal structure of ruma, the iron-sulfur cluster containing e. coli 23s ribosomal rna 5-methyluridine methyltransferase 0.8503 1 411
ID Description Score Start End Superfamily
1uwvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8652 248 411 3.40.50.150
2jjqA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8502 249 409 3.40.50.150
af_Q8II27_675_856_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8456 247 411 3.40.50.150
af_Q96GJ1_309_485_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8456 239 377 3.40.50.150
af_Q2FWZ3_2_80_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8423 1 66 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A4P5SN27-F1-model_v4 Putative RNA methyltransferase 0.9759 3 411 GO:0070041
GO:0070475
AF-A0A833GGA9-F1-model_v4 Class I SAM-dependent RNA methyltransferase 0.9752 1 337 GO:0070041
GO:0070475
AF-A0A7C5GCH3-F1-model_v4 Class I SAM-dependent RNA methyltransferase 0.973 205 411 GO:0070041
GO:0070475
AF-A0A357L139-F1-model_v4 RNA methyltransferase 0.971 250 411 GO:0070041
GO:0070475
AF-A0A7C0WEF1-F1-model_v4 Class I SAM-dependent RNA methyltransferase 0.9709 215 411 GO:0070041
GO:0070475

Map