F379406

General Info

Members Datasets Scaffolds Average Seq Length
273 200 546 515

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054920844|8054924252
Length 566
Sequence RPWRVSARIDGRTHGLCATVGDPAGGAEVEPAPVRVVPSTDPAHLDDVVAEVELVGPETILAAAVAAQAAARSWAAVPAPVRGSVIGSFGRLVTDNADALARLVTREVGKPVAEARGEVQEIIDTCEFFRGEGRRLYGQTVPSEMPDRQLFTFREPLGVMMVITAGNFPVAVPSWYLVPALLAGNTVVWKPAEYAAACAQAMVELLAAAGVPAGAVNLVPADGRATAAGLERALAAGAVDKVGFTGSTEVGRSIGALCGRHLQTPCLELGGKNPMVVTPGADLDAAVEAAVFAGFGTAGQRCTSLGTAIVHESVHAAFVRRFDAAVSAAVIGDPTGDVLYGPLLDARFAAGFERHLTLLRGHHRLSGSTALGRITGTGGAAGPGAAGPCAAGTEGAGTEGAAGFGGLPRNGPRRGFVGDPDRGLYYHPLIVDGVRPDDELFREETFGPIVGVTTYRDLDEAIELANLPGYGLSSSIYTADAASALRFRRGVRAGMVSVNGSTTGAEAHLPFGGNGRSGNGSRQSGIWMLDQVTRWQSLSWDYSGRLQRAQLDTAVPAADLSFRLPG

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
89 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
91 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
94 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
109 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
131 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
170 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
177 8054920844 Frankia tisae Agncl-8 Isolate Nodule
178 2527291627 Frankia casuarinae Thr Isolate Nodule
179 2527291629 Frankia sp. BMG5.23 Isolate Nodule
180 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
181 2576861822 Frankia sp. CeD Isolate Nodule
182 2626541554 Frankia sp. AvcI.1 Isolate Nodule
183 2684623036 Frankia sp. CgIM4 Isolate Nodule
184 2710264753 Frankia sp. KB5 Isolate Nodule
185 2773857924 Frankia sp. CgIS1 Isolate Nodule
186 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
187 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
188 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
189 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
190 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
191 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
192 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
193 2891562705 Microbispora tritici MT50 Isolate Unclassified
194 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
195 637000116 Frankia casuarinae CcI3 Isolate Nodule
196 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
197 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
198 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
199 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
200 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.84
Metatranscriptomes 0.37
Isolates 8.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 3.66
Rhizoplane 11.72
Rhizosphere 79.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10027231 3300003203 Bacteria 2195
2 Ga0070690_100062010 3300005330 Bacteria 2410
3 Ga0070660_100062205 3300005339 Bacteria 2899
4 Ga0070691_10008098 3300005341 Bacteria 4812
5 Ga0070692_10079718 3300005345 Bacteria 1761
6 Ga0070671_100046009 3300005355 Bacteria 3628
7 Ga0070659_100030044 3300005366 Bacteria 4204
8 Ga0070667_100084415 3300005367 Bacteria 2722
9 Ga0070709_10025092 3300005434 Bacteria 3518
10 Ga0070714_100004096 3300005435 Bacteria 10960
11 Ga0070714_100019556 3300005435 Bacteria 5519
12 Ga0070714_100024476 3300005435 Bacteria 4973
13 Ga0070713_100017613 3300005436 Bacteria 5407
14 Ga0070713_100032180 3300005436 Bacteria 4186
15 Ga0070710_10046658 3300005437 Bacteria 2413
16 Ga0070711_100060875 3300005439 Bacteria 2626
17 Ga0070694_100052607 3300005444 Bacteria 2753
18 Ga0070708_100050741 3300005445 Bacteria 3674
19 Ga0070678_100015831 3300005456 Bacteria 4804
20 Ga0070681_10062786 3300005458 Bacteria 3688
21 Ga0070681_10115748 3300005458 Bacteria 2619
22 Ga0070698_100001112 3300005471 Bacteria 29679
23 Ga0070698_100024982 3300005471 Bacteria 6228
24 Ga0070698_100058382 3300005471 Bacteria 3901
25 Ga0070699_100005037 3300005518 Bacteria 11629
26 Ga0070679_100010858 3300005530 Bacteria 8652
27 Ga0070697_100028231 3300005536 Bacteria 4492
28 Ga0068853_100046542 3300005539 Bacteria 3720
29 Ga0070672_100049324 3300005543 Bacteria 3275
30 Ga0070704_100026045 3300005549 Bacteria 3858
31 Ga0070664_100050032 3300005564 Bacteria 3535
32 Ga0068857_100012159 3300005577 Bacteria 7488
33 Ga0068856_100078402 3300005614 Bacteria 3275
34 Ga0068852_100025472 3300005616 Bacteria 4793
35 Ga0068859_100223788 3300005617 Bacteria 1970
36 Ga0068870_10021718 3300005840 Bacteria 3145
37 Ga0068863_100023852 3300005841 Bacteria 5838
38 Ga0068858_100027416 3300005842 Bacteria 5292
39 Ga0068860_100048813 3300005843 Bacteria 4034
40 Ga0081455_10008118 3300005937 Bacteria 10957
41 Ga0081538_10000351 3300005981 Bacteria 52575
42 Ga0081538_10002660 3300005981 Bacteria 17227
43 Ga0081538_10003258 3300005981 Bacteria 15426
44 Ga0081538_10028813 3300005981 Bacteria 3809
45 Ga0081538_10047323 3300005981 Bacteria 2639
46 Ga0081540_1002915 3300005983 Bacteria 13786
47 Ga0081540_1007534 3300005983 Bacteria 7746
48 Ga0081539_10010676 3300005985 Bacteria 7408
49 Ga0081539_10010788 3300005985 Bacteria 7352
50 Ga0070717_10002954 3300006028 Bacteria 12079
51 Ga0070717_10168197 3300006028 Bacteria 1905
52 Ga0070716_100028000 3300006173 Bacteria 3033
53 Ga0070716_100067288 3300006173 Bacteria 2092
54 Ga0075428_100003214 3300006844 Bacteria 17874
55 Ga0075428_100003222 3300006844 Bacteria 17856
56 Ga0075428_100066238 3300006844 Bacteria 3955
57 Ga0075428_100106438 3300006844 Bacteria 3058
58 Ga0075430_100001842 3300006846 Bacteria 17357
59 Ga0075430_100002284 3300006846 Bacteria 15882
60 Ga0075430_100003986 3300006846 Bacteria 12447
61 Ga0075430_100059855 3300006846 Bacteria 3201
62 Ga0075431_100010610 3300006847 Bacteria 9266
63 Ga0075431_100018927 3300006847 Bacteria 7015
64 Ga0075431_100044988 3300006847 Bacteria 4551
65 Ga0075433_10064901 3300006852 Bacteria 3201
66 Ga0075434_100038865 3300006871 Bacteria 4715
67 Ga0075434_100212522 3300006871 Bacteria 1954
68 Ga0075429_100005054 3300006880 Bacteria 11348
69 Ga0075429_100013031 3300006880 Bacteria 7215
70 Ga0075429_100101106 3300006880 Bacteria 2517
71 Ga0097620_100223802 3300006931 Bacteria 1970
72 Ga0075435_100038229 3300007076 Bacteria 3826
73 Ga0105240_10059876 3300009093 Bacteria 4750
74 Ga0111539_10102469 3300009094 Bacteria 3360
75 Ga0105245_10058649 3300009098 Bacteria 3465
76 Ga0105245_10133214 3300009098 Bacteria 2333
77 Ga0105247_10007066 3300009101 Bacteria 6903
78 Ga0114129_10001011 3300009147 Bacteria 36664
79 Ga0114129_10003310 3300009147 Bacteria 22631
80 Ga0114129_10004327 3300009147 Bacteria 20082
81 Ga0114129_10010931 3300009147 Bacteria 12935
82 Ga0105242_10195073 3300009176 Bacteria 1795
83 Ga0105248_10308270 3300009177 Bacteria 1783
84 Ga0105238_10079629 3300009551 Bacteria 3266
85 Ga0105239_10078371 3300010375 Bacteria 3636
86 Ga0157370_10115943 3300013104 Bacteria 2502
87 Ga0157378_10036927 3300013297 Bacteria 4325
88 Ga0163162_10028262 3300013306 Bacteria 5548
89 Ga0157375_10040438 3300013308 Bacteria 4494
90 Ga0163163_10070619 3300014325 Bacteria 3478
91 Ga0157377_10013819 3300014745 Bacteria 4093
92 Ga0213876_10001103 3300021384 Bacteria 17278
93 Ga0224712_10006123 3300022467 Bacteria 3404
94 Ga0224572_1005137 3300024225 Bacteria 2320
95 Ga0207653_10011506 3300025885 Bacteria 2760
96 Ga0207699_10004816 3300025906 Bacteria 6458
97 Ga0207699_10012586 3300025906 Bacteria 4307
98 Ga0207699_10026560 3300025906 Bacteria 3194
99 Ga0207643_10016728 3300025908 Bacteria 4001
100 Ga0207684_10006351 3300025910 Bacteria 10774
101 Ga0207707_10028091 3300025912 Bacteria 4918
102 Ga0207693_10063453 3300025915 Bacteria 2894
103 Ga0207663_10014866 3300025916 Bacteria 4277
104 Ga0207657_10058391 3300025919 Bacteria 3320
105 Ga0207646_10000973 3300025922 Bacteria 36940
106 Ga0207646_10045335 3300025922 Bacteria 3947
107 Ga0207700_10004304 3300025928 Bacteria 8368
108 Ga0207700_10014034 3300025928 Bacteria 5236
109 Ga0207700_10044877 3300025928 Bacteria 3257
110 Ga0207700_10060294 3300025928 Bacteria 2873
111 Ga0207664_10011689 3300025929 Bacteria 6255
112 Ga0207664_10016388 3300025929 Bacteria 5407
113 Ga0207664_10016811 3300025929 Bacteria 5346
114 Ga0207664_10018077 3300025929 Bacteria 5180
115 Ga0207664_10027152 3300025929 Bacteria 4336
116 Ga0207664_10176366 3300025929 Bacteria 1833
117 Ga0207691_10044543 3300025940 Bacteria 4083
118 Ga0207711_10038049 3300025941 Bacteria 4090
119 Ga0207689_10115247 3300025942 Bacteria 2209
120 Ga0207661_10036164 3300025944 Bacteria 3853
121 Ga0207640_10104405 3300025981 Bacteria 1994
122 Ga0207678_10002379 3300026067 Bacteria 17073
123 Ga0207702_10034510 3300026078 Bacteria 4230
124 Ga0207683_10020651 3300026121 Bacteria 5637
125 Ga0207698_10062988 3300026142 Bacteria 2900
126 Ga0307408_100036631 3300031548 Bacteria 3450
127 Ga0307407_10024445 3300031903 Bacteria 3168
128 Ga0373926_0007263 3300035083 Bacteria 3694
129 Ga0373923_0008278 3300035111 Bacteria 3700
130 Ga0373936_0003335 3300035113 Bacteria 6021
131 Ga0373953_0002625 3300035117 Bacteria 5436
132 Ga0373954_0016838 3300035118 Bacteria 3278
133 Ga0373956_0007241 3300035119 Bacteria 4467
134 Ga0373943_0038107 3300035170 Bacteria 2310
135 Ga0373943_0089826 3300035170 Bacteria 1589
136 Ga0373955_0045813 3300035172 Bacteria 2361
137 Ga0373935_0004573 3300035692 Bacteria 8136
138 Ga0373935_0010571 3300035692 Bacteria 5538
139 Ga0373933_0009847 3300035724 Bacteria 5230
140 Ga0373947_0000016 3300035725 Bacteria 124284
141 Ga0373937_0147656 3300036401 Bacteria 2201
142 Ga0373937_0172490 3300036401 Bacteria 2029
143 Ga0373925_0043557 3300037068 Bacteria 3332
144 Ga0395900_0035453 3300037418 Bacteria 5139
145 Ga0395898_0005973 3300037466 Bacteria 13076
146 Ga0395905_0014810 3300037471 Bacteria 7435
147 Ga0436364_1502750 3300037853 Bacteria 3239
148 Ga0395901_0008524 3300038443 Bacteria 10356
149 Ga0395901_0013686 3300038443 Bacteria 8246
150 Ga0395901_0046204 3300038443 Bacteria 4522
151 Ga0436363_0491948 3300039450 Bacteria 3570
152 Ga0436363_0771152 3300039450 Bacteria 1993
153 Ga0466965_0056781 3300044683 Bacteria 1950
154 Ga0466971_0031137 3300044719 Bacteria 2388
155 Ga0466960_0028988 3300044901 Bacteria 2537
156 Ga0466958_0015003 3300045836 Bacteria 4433
157 Ga0466958_0043123 3300045836 Bacteria 2716
158 Ga0466967_0153855 3300045976 Bacteria 2152
159 Ga0495592_0031254 3300046454 Bacteria 4024
160 Ga0495629_0025537 3300046459 Bacteria 4197
161 Ga0495653_0036094 3300046463 Bacteria 3896
162 Ga0495582_0017708 3300046473 Bacteria 3895
163 Ga0495639_0009778 3300046475 Bacteria 4115
164 Ga0495662_0004664 3300046476 Bacteria 6878
165 Ga0495664_0070730 3300046477 Bacteria 2083
166 Ga0495594_0017897 3300046499 Bacteria 3749
167 Ga0495608_0008943 3300046511 Bacteria 7003
168 Ga0495618_0013103 3300046514 Bacteria 5041
169 Ga0495628_0023676 3300046516 Bacteria 5037
170 Ga0495630_0026121 3300046517 Bacteria 4321
171 Ga0495665_0001824 3300046531 Bacteria 11498
172 Ga0495640_0016034 3300046533 Bacteria 5617
173 Ga0495586_0007125 3300046535 Bacteria 5958
174 Ga0495587_0011962 3300046536 Bacteria 5485
175 Ga0495645_0060169 3300046543 Bacteria 2753
176 Ga0495667_0002419 3300046559 Bacteria 12460
177 Ga0495634_0011371 3300046642 Bacteria 6483
178 Ga0495635_0032407 3300046663 Bacteria 3625
179 Ga0495635_0045163 3300046663 Bacteria 3039
180 Ga0495657_0046427 3300046675 Bacteria 2940
181 Ga0495599_0016599 3300046678 Bacteria 4571
182 Ga0495623_0035725 3300046679 Bacteria 3184
183 Ga0495646_0012468 3300046680 Bacteria 5405
184 Ga0495658_0007880 3300046683 Bacteria 5273
185 Ga0495613_0023260 3300046689 Bacteria 4616
186 Ga0495624_0006411 3300046690 Bacteria 8349
187 Ga0495600_0010382 3300046809 Bacteria 5780
188 Ga0495581_0017852 3300047315 Bacteria 4123
189 Ga0495604_0004687 3300047317 Bacteria 10843
190 Ga0495674_0019549 3300047319 Bacteria 6285
191 Ga0495674_0071113 3300047319 Bacteria 3004
192 Ga0495674_0121777 3300047319 Bacteria 2203
193 Ga0495680_0037763 3300047322 Bacteria 3867
194 Ga0495675_0016730 3300047444 Bacteria 4637
195 Ga0495684_0016754 3300047471 Bacteria 5645
196 Ga0495593_0009144 3300047673 Bacteria 5747
197 Ga0495602_0125264 3300048088 Bacteria 2059
198 Ga0495614_0020139 3300048089 Bacteria 2886
199 Ga0496100_0001722 3300048903 Bacteria 10892
200 Ga0496100_0009098 3300048903 Bacteria 5569
201 Ga0496101_0001839 3300048904 Bacteria 12796
202 Ga0496101_0142539 3300048904 Bacteria 1827
203 Ga0496102_0013330 3300048905 Bacteria 7121
204 Ga0496103_0068299 3300048906 Bacteria 2221
205 Ga0496103_0081508 3300048906 Bacteria 2035
206 Ga0496104_0034427 3300048907 Bacteria 4723
207 Ga0496105_0006963 3300048908 Bacteria 8711
208 Ga0496105_0083772 3300048908 Bacteria 2633
209 Ga0496105_0113177 3300048908 Bacteria 2240
210 Ga0496105_0134092 3300048908 Bacteria 2041
211 Ga0496106_0002061 3300048909 Bacteria 15089
212 Ga0496106_0024165 3300048909 Bacteria 4516
213 Ga0496107_0030160 3300048910 Bacteria 3864
214 Ga0496107_0048224 3300048910 Bacteria 3068
215 Ga0496108_0006826 3300048911 Bacteria 9235
216 Ga0496108_0084689 3300048911 Bacteria 2690
217 Ga0496109_0014706 3300048912 Bacteria 6810
218 Ga0496109_0094617 3300048912 Bacteria 2765
219 Ga0496110_0053435 3300048913 Bacteria 3551
220 Ga0496111_0014514 3300048914 Bacteria 5384
221 Ga0496111_0064691 3300048914 Bacteria 2653
222 Ga0496112_0006198 3300048915 Bacteria 10467
223 Ga0496112_0013675 3300048915 Bacteria 7500
224 Ga0496112_0016984 3300048915 Bacteria 6830
225 Ga0496112_0124712 3300048915 Bacteria 2546
226 Ga0496112_0344858 3300048915 Bacteria 1432
227 Ga0496113_0012329 3300048916 Bacteria 5742
228 Ga0496115_0010686 3300048918 Bacteria 6866
229 Ga0496115_0032572 3300048918 Bacteria 4112
230 Ga0501067_0128490 3300049583 Bacteria 1410
231 nmdc:mga05p37_13198_c1 3300050507 Bacteria 9889
232 nmdc:mga05p37_2329_c1 3300050507 Bacteria 22115
233 nmdc:mga05p37_5484_c1 3300050507 Bacteria 14901
234 nmdc:mga09592_102079_c1 3300050508 Bacteria 2457
235 nmdc:mga09592_11828_c1 3300050508 Bacteria 7098
236 nmdc:mga09592_72_c1 3300050508 Bacteria 56957
237 nmdc:mga0qj67_1321_c1 3300050509 Bacteria 17420
238 nmdc:mga0qj67_48_c1 3300050509 Bacteria 85487
239 nmdc:mga0qj67_64260_c1 3300050509 Bacteria 2919
240 nmdc:mga06r32_949_c1 3300050510 Bacteria 25821
241 nmdc:mga0rr50_85930_c1 3300050513 Bacteria 2439
242 nmdc:mga08x19_42921_c1 3300050514 Bacteria 2884
243 nmdc:mga0a205_195394_c1 3300050515 Bacteria 1914
244 nmdc:mga0a205_51680_c1 3300050515 Bacteria 3967
245 Ga0495601_0011176 3300053077 Bacteria 5362
246 Ga0495612_0002781 3300053078 Bacteria 7241
247 Ga0495595_0044267 3300053084 Bacteria 2044
248 Ga0495619_0015022 3300053085 Bacteria 4893
249 Ga0500646_0000310 3300053090 Bacteria 14923
250 8054924252 8054920844 Bacteria 7068637
251 2528204771 2527291627 Bacteria 5309833
252 2528214709 2527291629 Bacteria 5267418
253 2546948920 2546825537 Bacteria 5389291
254 2579750419 2576861822 Bacteria 5004595
255 2626637097 2626541554 Bacteria 7741902
256 2686544489 2684623036 Bacteria 5199090
257 2710602930 2710264753 Bacteria 5455564
258 2774867923 2773857924 Bacteria 5256821
259 2795796107 2795385472 Bacteria 6627535
260 2856743995 2856741275 Bacteria 8096094
261 2863073462 2863067949 Bacteria 8541735
262 2866556350 2866552031 Bacteria 5824618
263 2873318978 2873314349 Bacteria 8512634
264 2891403491 2891395885 Bacteria 9251614
265 2891556761 2891554331 Bacteria 8812224
266 2891565887 2891562705 Bacteria 8039471
267 3003004531 3002998708 Bacteria 11715108
268 637880193 637000116 Bacteria 5433628
269 8053952900 8053945823 Bacteria 8962862
270 8054919216 8054913762 Bacteria 7713009
271 8055072482 8055066027 Bacteria 9479577
272 8055177630 8055172936 Bacteria 9305943
273 8056214466 8056207758 Bacteria 8639239
274 JGI25406J46586_10027231
275 Ga0070690_100062010
276 Ga0070660_100062205
277 Ga0070691_10008098
278 Ga0070692_10079718
279 Ga0070671_100046009
280 Ga0070659_100030044
281 Ga0070667_100084415
282 Ga0070709_10025092
283 Ga0070714_100004096
284 Ga0070714_100019556
285 Ga0070714_100024476
286 Ga0070713_100017613
287 Ga0070713_100032180
288 Ga0070710_10046658
289 Ga0070711_100060875
290 Ga0070694_100052607
291 Ga0070708_100050741
292 Ga0070678_100015831
293 Ga0070681_10062786
294 Ga0070681_10115748
295 Ga0070698_100001112
296 Ga0070698_100024982
297 Ga0070698_100058382
298 Ga0070699_100005037
299 Ga0070679_100010858
300 Ga0070697_100028231
301 Ga0068853_100046542
302 Ga0070672_100049324
303 Ga0070704_100026045
304 Ga0070664_100050032
305 Ga0068857_100012159
306 Ga0068856_100078402
307 Ga0068852_100025472
308 Ga0068859_100223788
309 Ga0068870_10021718
310 Ga0068863_100023852
311 Ga0068858_100027416
312 Ga0068860_100048813
313 Ga0081455_10008118
314 Ga0081538_10000351
315 Ga0081538_10002660
316 Ga0081538_10003258
317 Ga0081538_10028813
318 Ga0081538_10047323
319 Ga0081540_1002915
320 Ga0081540_1007534
321 Ga0081539_10010676
322 Ga0081539_10010788
323 Ga0070717_10002954
324 Ga0070717_10168197
325 Ga0070716_100028000
326 Ga0070716_100067288
327 Ga0075428_100003214
328 Ga0075428_100003222
329 Ga0075428_100066238
330 Ga0075428_100106438
331 Ga0075430_100001842
332 Ga0075430_100002284
333 Ga0075430_100003986
334 Ga0075430_100059855
335 Ga0075431_100010610
336 Ga0075431_100018927
337 Ga0075431_100044988
338 Ga0075433_10064901
339 Ga0075434_100038865
340 Ga0075434_100212522
341 Ga0075429_100005054
342 Ga0075429_100013031
343 Ga0075429_100101106
344 Ga0097620_100223802
345 Ga0075435_100038229
346 Ga0105240_10059876
347 Ga0111539_10102469
348 Ga0105245_10058649
349 Ga0105245_10133214
350 Ga0105247_10007066
351 Ga0114129_10001011
352 Ga0114129_10003310
353 Ga0114129_10004327
354 Ga0114129_10010931
355 Ga0105242_10195073
356 Ga0105248_10308270
357 Ga0105238_10079629
358 Ga0105239_10078371
359 Ga0157370_10115943
360 Ga0157378_10036927
361 Ga0163162_10028262
362 Ga0157375_10040438
363 Ga0163163_10070619
364 Ga0157377_10013819
365 Ga0213876_10001103
366 Ga0224712_10006123
367 Ga0224572_1005137
368 Ga0207653_10011506
369 Ga0207699_10004816
370 Ga0207699_10012586
371 Ga0207699_10026560
372 Ga0207643_10016728
373 Ga0207684_10006351
374 Ga0207707_10028091
375 Ga0207693_10063453
376 Ga0207663_10014866
377 Ga0207657_10058391
378 Ga0207646_10000973
379 Ga0207646_10045335
380 Ga0207700_10004304
381 Ga0207700_10014034
382 Ga0207700_10044877
383 Ga0207700_10060294
384 Ga0207664_10011689
385 Ga0207664_10016388
386 Ga0207664_10016811
387 Ga0207664_10018077
388 Ga0207664_10027152
389 Ga0207664_10176366
390 Ga0207691_10044543
391 Ga0207711_10038049
392 Ga0207689_10115247
393 Ga0207661_10036164
394 Ga0207640_10104405
395 Ga0207678_10002379
396 Ga0207702_10034510
397 Ga0207683_10020651
398 Ga0207698_10062988
399 Ga0307408_100036631
400 Ga0307407_10024445
401 Ga0373926_0007263
402 Ga0373923_0008278
403 Ga0373936_0003335
404 Ga0373953_0002625
405 Ga0373954_0016838
406 Ga0373956_0007241
407 Ga0373943_0038107
408 Ga0373943_0089826
409 Ga0373955_0045813
410 Ga0373935_0004573
411 Ga0373935_0010571
412 Ga0373933_0009847
413 Ga0373947_0000016
414 Ga0373937_0147656
415 Ga0373937_0172490
416 Ga0373925_0043557
417 Ga0395900_0035453
418 Ga0395898_0005973
419 Ga0395905_0014810
420 Ga0436364_1502750
421 Ga0395901_0008524
422 Ga0395901_0013686
423 Ga0395901_0046204
424 Ga0436363_0491948
425 Ga0436363_0771152
426 Ga0466965_0056781
427 Ga0466971_0031137
428 Ga0466960_0028988
429 Ga0466958_0015003
430 Ga0466958_0043123
431 Ga0466967_0153855
432 Ga0495592_0031254
433 Ga0495629_0025537
434 Ga0495653_0036094
435 Ga0495582_0017708
436 Ga0495639_0009778
437 Ga0495662_0004664
438 Ga0495664_0070730
439 Ga0495594_0017897
440 Ga0495608_0008943
441 Ga0495618_0013103
442 Ga0495628_0023676
443 Ga0495630_0026121
444 Ga0495665_0001824
445 Ga0495640_0016034
446 Ga0495586_0007125
447 Ga0495587_0011962
448 Ga0495645_0060169
449 Ga0495667_0002419
450 Ga0495634_0011371
451 Ga0495635_0032407
452 Ga0495635_0045163
453 Ga0495657_0046427
454 Ga0495599_0016599
455 Ga0495623_0035725
456 Ga0495646_0012468
457 Ga0495658_0007880
458 Ga0495613_0023260
459 Ga0495624_0006411
460 Ga0495600_0010382
461 Ga0495581_0017852
462 Ga0495604_0004687
463 Ga0495674_0019549
464 Ga0495674_0071113
465 Ga0495674_0121777
466 Ga0495680_0037763
467 Ga0495675_0016730
468 Ga0495684_0016754
469 Ga0495593_0009144
470 Ga0495602_0125264
471 Ga0495614_0020139
472 Ga0496100_0001722
473 Ga0496100_0009098
474 Ga0496101_0001839
475 Ga0496101_0142539
476 Ga0496102_0013330
477 Ga0496103_0068299
478 Ga0496103_0081508
479 Ga0496104_0034427
480 Ga0496105_0006963
481 Ga0496105_0083772
482 Ga0496105_0113177
483 Ga0496105_0134092
484 Ga0496106_0002061
485 Ga0496106_0024165
486 Ga0496107_0030160
487 Ga0496107_0048224
488 Ga0496108_0006826
489 Ga0496108_0084689
490 Ga0496109_0014706
491 Ga0496109_0094617
492 Ga0496110_0053435
493 Ga0496111_0014514
494 Ga0496111_0064691
495 Ga0496112_0006198
496 Ga0496112_0013675
497 Ga0496112_0016984
498 Ga0496112_0124712
499 Ga0496112_0344858
500 Ga0496113_0012329
501 Ga0496115_0010686
502 Ga0496115_0032572
503 Ga0501067_0128490
504 nmdc:mga05p37_13198_c1
505 nmdc:mga05p37_2329_c1
506 nmdc:mga05p37_5484_c1
507 nmdc:mga09592_102079_c1
508 nmdc:mga09592_11828_c1
509 nmdc:mga09592_72_c1
510 nmdc:mga0qj67_1321_c1
511 nmdc:mga0qj67_48_c1
512 nmdc:mga0qj67_64260_c1
513 nmdc:mga06r32_949_c1
514 nmdc:mga0rr50_85930_c1
515 nmdc:mga08x19_42921_c1
516 nmdc:mga0a205_195394_c1
517 nmdc:mga0a205_51680_c1
518 Ga0495601_0011176
519 Ga0495612_0002781
520 Ga0495595_0044267
521 Ga0495619_0015022
522 Ga0500646_0000310
523 8054924252
524 2528204771
525 2528214709
526 2546948920
527 2579750419
528 2626637097
529 2686544489
530 2710602930
531 2774867923
532 2795796107
533 2856743995
534 2863073462
535 2866556350
536 2873318978
537 2891403491
538 2891556761
539 2891565887
540 3003004531
541 637880193
542 8053952900
543 8054919216
544 8055072482
545 8055177630
546 8056214466

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

410

538

0.96

PF00171

Aldedh

Aldehyde dehydrogenase family

29

366

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vz0-assembly2.cif.gz_C structural insights into cofactor and substrate selection by gox0499 0.9354 8 440
6mvs-assembly1.cif.gz_A structure of a bacterial aldh16 complexed with nad 0.9303 8 439
4dng-assembly1.cif.gz_B crystal structure of putative aldehyde dehydrogenase from bacillus subtilis subsp. subtilis str. 168 0.9258 7 480
6mvu-assembly1.cif.gz_A structure of a bacterial aldh16 active site mutant c295a complexed with p-nitrophenylacetate 0.922 8 439
3ty7-assembly1.cif.gz_A crystal structure of aldehyde dehydrogenase family protein from staphylococcus aureus 0.9198 1 477
ID Description Score Start End Superfamily
1t90B01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9385 3 240 3.40.605.10
af_A0A1D6Q1L8_277_500_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9374 243 440 3.40.309.10
af_Q1WIQ6_268_458_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9373 244 440 3.40.309.10
af_P76149_240_424_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9329 246 440 3.40.309.10
af_O33340_2_231_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9318 8 242 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A382JC37-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9572 8 301 GO:0016620
AF-A0A382P791-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9535 8 223 GO:0004491
GO:0006210
GO:0006574
AF-A0A436W9S7-F1-model_v4 Aldehyde dehydrogenase 0.9452 159 439 GO:0016620
AF-W7KTC1-F1-model_v4 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) 0.944 8 277 GO:0003842
GO:0009898
GO:0010133
AF-A0A382DN27-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9429 10 403 GO:0016620

Map