F379287

General Info

Members Datasets Scaffolds Average Seq Length
273 188 546 198

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0150741|Ga0496114_0150741_917_1576
Length 219
Sequence LARKPGVTNYPSEVTSEGTQARDARQDDTVSDRVLTVPNALSALRLVGVPVFLWLILSEQDGWALLVLMLSGVTDYLDGKIARRYGLVSKVGALLDPIADRLYILTTLLGLAWREIIPWWLVALLLGRELFMALVLLWSRSRGHATLPVHFVGKAATFNLLYAFPLLLLGDGDSGWAEAARAIGWGFAWWGTALYWVAGVLYAVQAARLPRRTSPEVRG

Samples

Sample ID Description Type Environment
1 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
76 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
77 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
78 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
79 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
80 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
81 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
95 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
106 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
149 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
154 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
155 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
156 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
157 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
158 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
159 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
164 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
165 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
166 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
167 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
170 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
171 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
172 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
176 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
177 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
178 2643221679 Angustibacter sp. Root456 Isolate Unclassified
179 2643221711 Terrabacter sp. Root85 Isolate Unclassified
180 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
181 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
182 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
183 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
184 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
185 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
186 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
187 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
188 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.24
Metatranscriptomes 0
Isolates 4.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.42
Nodule 0
Rhizoplane 24.91
Rhizosphere 62.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496114_0150741 3300048917 Bacteria 2017
2 Ga0070683_100009755 3300005329 Bacteria 8224
3 Ga0070682_100357760 3300005337 Bacteria 1090
4 Ga0070660_100719984 3300005339 Bacteria 837
5 Ga0070661_100446883 3300005344 Bacteria 1028
6 Ga0070668_100438240 3300005347 Bacteria 1121
7 Ga0070674_100847041 3300005356 Bacteria 793
8 Ga0070659_100622829 3300005366 Bacteria 929
9 Ga0070678_100315303 3300005456 Bacteria 1334
10 Ga0070678_100403218 3300005456 Bacteria 1188
11 Ga0068867_100041115 3300005459 Bacteria 3378
12 Ga0070684_100054602 3300005535 Bacteria 3481
13 Ga0070696_100000806 3300005546 Bacteria 20145
14 Ga0070702_100000319 3300005615 Bacteria 16677
15 Ga0068859_100200678 3300005617 Bacteria 2079
16 Ga0068866_10043734 3300005718 Bacteria 2237
17 Ga0068860_100224784 3300005843 Bacteria 1823
18 Ga0081455_10217888 3300005937 Bacteria 1417
19 Ga0068865_100047341 3300006881 Bacteria 2955
20 Ga0097620_100200677 3300006931 Bacteria 2079
21 Ga0111539_11365886 3300009094 Bacteria 822
22 Ga0105245_10108270 3300009098 Bacteria 2581
23 Ga0105245_10235511 3300009098 Bacteria 1772
24 Ga0105245_11142846 3300009098 Bacteria 826
25 Ga0105247_10694859 3300009101 Bacteria 765
26 Ga0105243_10119613 3300009148 Bacteria 2218
27 Ga0105242_10010708 3300009176 Bacteria 7041
28 Ga0105242_10106373 3300009176 Bacteria 2384
29 Ga0105248_11147216 3300009177 Bacteria 878
30 Ga0105238_10026839 3300009551 Bacteria 5870
31 Ga0105238_10598146 3300009551 Bacteria 1111
32 Ga0105249_10050146 3300009553 Bacteria 3806
33 Ga0105239_10378851 3300010375 Bacteria 1599
34 Ga0105239_10885105 3300010375 Bacteria 1025
35 Ga0157371_10448068 3300013102 Bacteria 949
36 Ga0157369_10018735 3300013105 Bacteria 7760
37 Ga0157378_10033763 3300013297 Bacteria 4525
38 Ga0163162_10157233 3300013306 Bacteria 2394
39 Ga0163162_10187040 3300013306 Bacteria 2198
40 Ga0157372_10128579 3300013307 Bacteria 2913
41 Ga0157372_10901018 3300013307 Bacteria 1026
42 Ga0157375_10021404 3300013308 Bacteria 5928
43 Ga0157375_10895201 3300013308 Bacteria 1032
44 Ga0157375_11107510 3300013308 Bacteria 927
45 Ga0163163_10428692 3300014325 Bacteria 1382
46 Ga0157380_10070525 3300014326 Bacteria 2824
47 Ga0157380_10086356 3300014326 Bacteria 2577
48 Ga0157380_10087944 3300014326 Bacteria 2556
49 Ga0182008_10196244 3300014497 Bacteria 1026
50 Ga0157376_11144066 3300014969 Bacteria 805
51 Ga0207688_10073298 3300025901 Bacteria 1946
52 Ga0207705_10326563 3300025909 Bacteria 1179
53 Ga0207707_10148502 3300025912 Bacteria 2049
54 Ga0207657_10065642 3300025919 Bacteria 3093
55 Ga0207652_10102311 3300025921 Bacteria 2532
56 Ga0207659_10756584 3300025926 Bacteria 834
57 Ga0207690_10738984 3300025932 Bacteria 811
58 Ga0207686_10007149 3300025934 Bacteria 6007
59 Ga0207669_10801362 3300025937 Bacteria 781
60 Ga0207704_10031704 3300025938 Bacteria 2981
61 Ga0207691_10420225 3300025940 Bacteria 1139
62 Ga0207691_10609762 3300025940 Bacteria 924
63 Ga0207661_10049317 3300025944 Bacteria 3351
64 Ga0207679_11083901 3300025945 Bacteria 735
65 Ga0207640_10240758 3300025981 Bacteria 1398
66 Ga0207677_10494946 3300026023 Bacteria 1056
67 Ga0207648_10218741 3300026089 Bacteria 1692
68 Ga0207674_11092434 3300026116 Bacteria 767
69 Ga0207683_10046324 3300026121 Bacteria 3805
70 Ga0207683_10133009 3300026121 Bacteria 2238
71 Ga0307517_10019375 3300028786 Bacteria 8734
72 Ga0307408_100482375 3300031548 Bacteria 1082
73 Ga0316577_10203562 3300031733 Bacteria 1119
74 Ga0307413_10264767 3300031824 Bacteria 1284
75 Ga0307413_10277699 3300031824 Bacteria 1258
76 Ga0307410_10028556 3300031852 Bacteria 3541
77 Ga0307406_10125870 3300031901 Bacteria 1790
78 Ga0307407_10469424 3300031903 Bacteria 917
79 Ga0307412_10474624 3300031911 Bacteria 1036
80 Ga0307409_100005086 3300031995 Bacteria 7501
81 Ga0307409_100170860 3300031995 Bacteria 1913
82 Ga0307416_100281407 3300032002 Bacteria 1640
83 Ga0307415_100115358 3300032126 Bacteria 2002
84 Ga0316582_0248880 3300036647 Bacteria 1218
85 Ga0316584_0071727 3300036712 Bacteria 2595
86 Ga0395899_0303365 3300037312 Bacteria 1080
87 Ga0395900_0039393 3300037418 Bacteria 4869
88 Ga0395898_0002149 3300037466 Bacteria 24274
89 Ga0395905_0012794 3300037471 Bacteria 8072
90 Ga0395901_0174131 3300038443 Bacteria 2257
91 Ga0395901_0255615 3300038443 Bacteria 1824
92 Ga0395901_0505009 3300038443 Bacteria 1231
93 Ga0439439_0033934 3300041406 Bacteria 1308
94 Ga0451800_0770349 3300041459 Bacteria 730
95 Ga0451849_0158719 3300041505 Bacteria 655
96 Ga0451853_4008868 3300041512 Bacteria 938
97 Ga0439449_0299754 3300042007 Bacteria 607
98 Ga0439457_017409 3300042014 Bacteria 1596
99 Ga0450906_015180 3300042145 Bacteria 1402
100 Ga0466969_0236234 3300044656 Bacteria 830
101 Ga0466966_0077596 3300044684 Bacteria 2073
102 Ga0466961_0117493 3300044693 Bacteria 1671
103 Ga0466967_0024010 3300045976 Bacteria 5006
104 Ga0495603_0030653 3300046455 Bacteria 3238
105 Ga0495629_0008929 3300046459 Bacteria 7367
106 Ga0495629_0433164 3300046459 Bacteria 891
107 Ga0495638_0017606 3300046460 Bacteria 4759
108 Ga0495651_0418297 3300046462 Bacteria 872
109 Ga0495653_0065545 3300046463 Bacteria 2734
110 Ga0495582_0395853 3300046473 Bacteria 796
111 Ga0495664_0141112 3300046477 Bacteria 1461
112 Ga0495608_0511963 3300046511 Bacteria 726
113 Ga0495620_0211288 3300046515 Bacteria 744
114 Ga0495643_0028228 3300046522 Bacteria 3148
115 Ga0495667_0428007 3300046559 Bacteria 833
116 Ga0495588_0104111 3300046674 Bacteria 1493
117 Ga0495588_0433974 3300046674 Bacteria 689
118 Ga0495658_0624780 3300046683 Bacteria 690
119 Ga0495613_0009323 3300046689 Bacteria 7284
120 Ga0495613_0057074 3300046689 Bacteria 2866
121 Ga0495670_0054216 3300046691 Bacteria 2008
122 Ga0495589_0116433 3300046794 Bacteria 1288
123 Ga0495676_0047222 3300047321 Bacteria 3484
124 Ga0495676_0173338 3300047321 Bacteria 1517
125 Ga0495676_0335882 3300047321 Bacteria 1012
126 Ga0495680_0221670 3300047322 Bacteria 1350
127 Ga0495687_128314 3300047443 Bacteria 902
128 Ga0495685_000639 3300047447 Bacteria 10709
129 Ga0495681_0007467 3300047470 Bacteria 6978
130 Ga0495593_0184761 3300047673 Bacteria 1050
131 Ga0495593_0265696 3300047673 Bacteria 859
132 Ga0495602_0098414 3300048088 Bacteria 2407
133 Ga0495614_0115195 3300048089 Bacteria 1182
134 Ga0496100_0005069 3300048903 Bacteria 7049
135 Ga0496100_0106151 3300048903 Bacteria 1944
136 Ga0496100_0268717 3300048903 Bacteria 1267
137 Ga0496101_0008022 3300048904 Bacteria 6881
138 Ga0496101_0189911 3300048904 Bacteria 1585
139 Ga0496101_0290433 3300048904 Bacteria 1279
140 Ga0496101_0385678 3300048904 Bacteria 1102
141 Ga0496102_0008158 3300048905 Bacteria 8962
142 Ga0496102_0023103 3300048905 Bacteria 5518
143 Ga0496102_0241380 3300048905 Bacteria 1704
144 Ga0496102_0244150 3300048905 Bacteria 1693
145 Ga0496102_0268311 3300048905 Bacteria 1609
146 Ga0496102_0437113 3300048905 Bacteria 1228
147 Ga0496102_0444762 3300048905 Bacteria 1216
148 Ga0496103_0039356 3300048906 Bacteria 2905
149 Ga0496103_0052905 3300048906 Bacteria 2516
150 Ga0496103_0057727 3300048906 Bacteria 2410
151 Ga0496103_0131444 3300048906 Bacteria 1599
152 Ga0496104_0004679 3300048907 Bacteria 11913
153 Ga0496104_0027897 3300048907 Bacteria 5227
154 Ga0496104_0051327 3300048907 Bacteria 3892
155 Ga0496104_0076326 3300048907 Bacteria 3192
156 Ga0496104_0304450 3300048907 Bacteria 1506
157 Ga0496104_0501416 3300048907 Bacteria 1125
158 Ga0496105_0002096 3300048908 Bacteria 14427
159 Ga0496105_0014001 3300048908 Bacteria 6381
160 Ga0496105_0173975 3300048908 Bacteria 1764
161 Ga0496105_0242272 3300048908 Bacteria 1463
162 Ga0496105_0243793 3300048908 Bacteria 1458
163 Ga0496105_0283962 3300048908 Bacteria 1334
164 Ga0496105_0443517 3300048908 Bacteria 1025
165 Ga0496106_0040497 3300048909 Bacteria 3490
166 Ga0496106_0155359 3300048909 Bacteria 1806
167 Ga0496107_0014879 3300048910 Bacteria 5448
168 Ga0496108_0079265 3300048911 Bacteria 2780
169 Ga0496108_0112912 3300048911 Bacteria 2325
170 Ga0496109_0080432 3300048912 Bacteria 3002
171 Ga0496109_0162378 3300048912 Bacteria 2093
172 Ga0496109_0674616 3300048912 Bacteria 971
173 Ga0496110_0004391 3300048913 Bacteria 10921
174 Ga0496110_0036582 3300048913 Bacteria 4263
175 Ga0496110_0113295 3300048913 Bacteria 2439
176 Ga0496110_0164318 3300048913 Bacteria 2013
177 Ga0496110_0194092 3300048913 Bacteria 1844
178 Ga0496110_0442996 3300048913 Bacteria 1184
179 Ga0496110_0931857 3300048913 Bacteria 775
180 Ga0496111_0041905 3300048914 Bacteria 3287
181 Ga0496111_0067648 3300048914 Bacteria 2595
182 Ga0496111_0086817 3300048914 Bacteria 2289
183 Ga0496112_0146374 3300048915 Bacteria 2331
184 Ga0496112_0363430 3300048915 Bacteria 1389
185 Ga0496112_0490344 3300048915 Bacteria 1165
186 Ga0496113_0415408 3300048916 Bacteria 1080
187 Ga0496113_0419264 3300048916 Bacteria 1075
188 Ga0496113_0611915 3300048916 Bacteria 872
189 Ga0496114_0002482 3300048917 Bacteria 14092
190 Ga0496114_0026818 3300048917 Bacteria 4719
191 Ga0496114_0059374 3300048917 Bacteria 3195
192 Ga0496114_0097760 3300048917 Bacteria 2501
193 Ga0496114_0104999 3300048917 Bacteria 2416
194 Ga0496114_0186399 3300048917 Bacteria 1813
195 Ga0496114_0186840 3300048917 Bacteria 1811
196 Ga0496114_0483230 3300048917 Bacteria 1096
197 Ga0496114_0741381 3300048917 Bacteria 859
198 Ga0496114_0861096 3300048917 Bacteria 787
199 Ga0496115_0701092 3300048918 Bacteria 796
200 Ga0501031_0097502 3300049568 Bacteria 1919
201 Ga0501032_0027299 3300049569 Bacteria 3924
202 Ga0501033_0056698 3300049570 Bacteria 2895
203 Ga0501034_0405662 3300049571 Bacteria 1285
204 Ga0501036_0063983 3300049572 Bacteria 3114
205 Ga0501036_0255632 3300049572 Bacteria 1468
206 Ga0501036_0301994 3300049572 Bacteria 1339
207 Ga0501036_0810275 3300049572 Bacteria 771
208 Ga0501038_0016825 3300049574 Bacteria 6619
209 Ga0501039_0053023 3300049575 Bacteria 3138
210 Ga0501039_0636815 3300049575 Bacteria 835
211 Ga0501040_0004510 3300049576 Bacteria 9035
212 Ga0501040_0207945 3300049576 Bacteria 1391
213 Ga0501041_0007960 3300049577 Bacteria 6233
214 Ga0501041_0147748 3300049577 Bacteria 1467
215 Ga0501042_0002451 3300049578 Bacteria 11395
216 Ga0501043_0035315 3300049579 Bacteria 3932
217 Ga0501046_0010385 3300049580 Bacteria 8000
218 Ga0501048_0001656 3300049582 Bacteria 16971
219 Ga0501068_0156828 3300049584 Bacteria 1433
220 Ga0501069_0189741 3300049585 Bacteria 1189
221 Ga0501069_0221136 3300049585 Bacteria 1101
222 Ga0501069_0285592 3300049585 Bacteria 966
223 Ga0501071_0005762 3300049587 Bacteria 7996
224 Ga0501072_0004317 3300049588 Bacteria 10792
225 Ga0501074_0054134 3300049590 Bacteria 2894
226 Ga0501075_0006683 3300049591 Bacteria 7954
227 Ga0501076_0007083 3300049592 Bacteria 8145
228 Ga0501077_0036259 3300049593 Bacteria 3141
229 Ga0501081_0012084 3300049743 Bacteria 5658
230 Ga0501045_0017190 3300049824 Bacteria 5134
231 Ga0501045_0855142 3300049824 Bacteria 669
232 Ga0500610_0046495 3300053079 Bacteria 2254
233 Ga0495595_0010962 3300053084 Bacteria 3782
234 Ga0495619_0227089 3300053085 Bacteria 1293
235 Ga0495619_0569473 3300053085 Bacteria 776
236 Ga0500578_0139920 3300053086 Bacteria 1513
237 Ga0500566_0008232 3300053094 Bacteria 6171
238 Ga0500660_059600 3300053100 Bacteria 1845
239 Ga0500553_040125 3300053101 Bacteria 2299
240 Ga0500560_120947 3300053107 Bacteria 878
241 Ga0500569_013107 3300053109 Bacteria 2021
242 Ga0500621_131956 3300053126 Bacteria 956
243 Ga0500628_002216 3300053129 Bacteria 3245
244 Ga0500652_081630 3300053131 Bacteria 1346
245 Ga0500658_0045314 3300053134 Bacteria 1777
246 Ga0500561_0078763 3300053137 Bacteria 956
247 Ga0500573_0031074 3300053140 Bacteria 3081
248 Ga0500579_083229 3300053143 Bacteria 1776
249 Ga0500586_081743 3300053145 Bacteria 1134
250 Ga0500588_0034546 3300053146 Bacteria 1482
251 Ga0500600_0007156 3300053149 Bacteria 6697
252 Ga0500603_150209 3300053150 Bacteria 722
253 Ga0500616_0018454 3300053153 Bacteria 3944
254 Ga0500633_0017057 3300053160 Bacteria 2121
255 Ga0500634_0026480 3300053161 Bacteria 3158
256 Ga0500656_000223 3300053732 Bacteria 3739
257 Ga0500587_006769 3300053739 Bacteria 1509
258 Ga0501084_0067455 3300054114 Bacteria 2994
259 Ga0501082_0006430 3300060353 Bacteria 10193
260 Ga0530510_0049229 3300061734 Bacteria 3045
261 2643849944 2643221567 Bacteria 4163945
262 2644135946 2643221624 Bacteria 4384879
263 2644444954 2643221679 Bacteria 3839507
264 2644609733 2643221711 Bacteria 4865335
265 2784472107 2784132109 Bacteria 3141763
266 2808874206 2808606365 Bacteria 4301966
267 2812374892 2811994882 Bacteria 4688362
268 2819427633 2818991318 Bacteria 5266538
269 2819666489 2818991458 Bacteria 4794049
270 2819691649 2818991462 Bacteria 4320267
271 2819729571 2818991469 Bacteria 4644110
272 2919450312 2919446982 Bacteria 3994487
273 3001891413 3001889506 Bacteria 2975194
274 Ga0496114_0150741
275 Ga0070683_100009755
276 Ga0070682_100357760
277 Ga0070660_100719984
278 Ga0070661_100446883
279 Ga0070668_100438240
280 Ga0070674_100847041
281 Ga0070659_100622829
282 Ga0070678_100315303
283 Ga0070678_100403218
284 Ga0068867_100041115
285 Ga0070684_100054602
286 Ga0070696_100000806
287 Ga0070702_100000319
288 Ga0068859_100200678
289 Ga0068866_10043734
290 Ga0068860_100224784
291 Ga0081455_10217888
292 Ga0068865_100047341
293 Ga0097620_100200677
294 Ga0111539_11365886
295 Ga0105245_10108270
296 Ga0105245_10235511
297 Ga0105245_11142846
298 Ga0105247_10694859
299 Ga0105243_10119613
300 Ga0105242_10010708
301 Ga0105242_10106373
302 Ga0105248_11147216
303 Ga0105238_10026839
304 Ga0105238_10598146
305 Ga0105249_10050146
306 Ga0105239_10378851
307 Ga0105239_10885105
308 Ga0157371_10448068
309 Ga0157369_10018735
310 Ga0157378_10033763
311 Ga0163162_10157233
312 Ga0163162_10187040
313 Ga0157372_10128579
314 Ga0157372_10901018
315 Ga0157375_10021404
316 Ga0157375_10895201
317 Ga0157375_11107510
318 Ga0163163_10428692
319 Ga0157380_10070525
320 Ga0157380_10086356
321 Ga0157380_10087944
322 Ga0182008_10196244
323 Ga0157376_11144066
324 Ga0207688_10073298
325 Ga0207705_10326563
326 Ga0207707_10148502
327 Ga0207657_10065642
328 Ga0207652_10102311
329 Ga0207659_10756584
330 Ga0207690_10738984
331 Ga0207686_10007149
332 Ga0207669_10801362
333 Ga0207704_10031704
334 Ga0207691_10420225
335 Ga0207691_10609762
336 Ga0207661_10049317
337 Ga0207679_11083901
338 Ga0207640_10240758
339 Ga0207677_10494946
340 Ga0207648_10218741
341 Ga0207674_11092434
342 Ga0207683_10046324
343 Ga0207683_10133009
344 Ga0307517_10019375
345 Ga0307408_100482375
346 Ga0316577_10203562
347 Ga0307413_10264767
348 Ga0307413_10277699
349 Ga0307410_10028556
350 Ga0307406_10125870
351 Ga0307407_10469424
352 Ga0307412_10474624
353 Ga0307409_100005086
354 Ga0307409_100170860
355 Ga0307416_100281407
356 Ga0307415_100115358
357 Ga0316582_0248880
358 Ga0316584_0071727
359 Ga0395899_0303365
360 Ga0395900_0039393
361 Ga0395898_0002149
362 Ga0395905_0012794
363 Ga0395901_0174131
364 Ga0395901_0255615
365 Ga0395901_0505009
366 Ga0439439_0033934
367 Ga0451800_0770349
368 Ga0451849_0158719
369 Ga0451853_4008868
370 Ga0439449_0299754
371 Ga0439457_017409
372 Ga0450906_015180
373 Ga0466969_0236234
374 Ga0466966_0077596
375 Ga0466961_0117493
376 Ga0466967_0024010
377 Ga0495603_0030653
378 Ga0495629_0008929
379 Ga0495629_0433164
380 Ga0495638_0017606
381 Ga0495651_0418297
382 Ga0495653_0065545
383 Ga0495582_0395853
384 Ga0495664_0141112
385 Ga0495608_0511963
386 Ga0495620_0211288
387 Ga0495643_0028228
388 Ga0495667_0428007
389 Ga0495588_0104111
390 Ga0495588_0433974
391 Ga0495658_0624780
392 Ga0495613_0009323
393 Ga0495613_0057074
394 Ga0495670_0054216
395 Ga0495589_0116433
396 Ga0495676_0047222
397 Ga0495676_0173338
398 Ga0495676_0335882
399 Ga0495680_0221670
400 Ga0495687_128314
401 Ga0495685_000639
402 Ga0495681_0007467
403 Ga0495593_0184761
404 Ga0495593_0265696
405 Ga0495602_0098414
406 Ga0495614_0115195
407 Ga0496100_0005069
408 Ga0496100_0106151
409 Ga0496100_0268717
410 Ga0496101_0008022
411 Ga0496101_0189911
412 Ga0496101_0290433
413 Ga0496101_0385678
414 Ga0496102_0008158
415 Ga0496102_0023103
416 Ga0496102_0241380
417 Ga0496102_0244150
418 Ga0496102_0268311
419 Ga0496102_0437113
420 Ga0496102_0444762
421 Ga0496103_0039356
422 Ga0496103_0052905
423 Ga0496103_0057727
424 Ga0496103_0131444
425 Ga0496104_0004679
426 Ga0496104_0027897
427 Ga0496104_0051327
428 Ga0496104_0076326
429 Ga0496104_0304450
430 Ga0496104_0501416
431 Ga0496105_0002096
432 Ga0496105_0014001
433 Ga0496105_0173975
434 Ga0496105_0242272
435 Ga0496105_0243793
436 Ga0496105_0283962
437 Ga0496105_0443517
438 Ga0496106_0040497
439 Ga0496106_0155359
440 Ga0496107_0014879
441 Ga0496108_0079265
442 Ga0496108_0112912
443 Ga0496109_0080432
444 Ga0496109_0162378
445 Ga0496109_0674616
446 Ga0496110_0004391
447 Ga0496110_0036582
448 Ga0496110_0113295
449 Ga0496110_0164318
450 Ga0496110_0194092
451 Ga0496110_0442996
452 Ga0496110_0931857
453 Ga0496111_0041905
454 Ga0496111_0067648
455 Ga0496111_0086817
456 Ga0496112_0146374
457 Ga0496112_0363430
458 Ga0496112_0490344
459 Ga0496113_0415408
460 Ga0496113_0419264
461 Ga0496113_0611915
462 Ga0496114_0002482
463 Ga0496114_0026818
464 Ga0496114_0059374
465 Ga0496114_0097760
466 Ga0496114_0104999
467 Ga0496114_0186399
468 Ga0496114_0186840
469 Ga0496114_0483230
470 Ga0496114_0741381
471 Ga0496114_0861096
472 Ga0496115_0701092
473 Ga0501031_0097502
474 Ga0501032_0027299
475 Ga0501033_0056698
476 Ga0501034_0405662
477 Ga0501036_0063983
478 Ga0501036_0255632
479 Ga0501036_0301994
480 Ga0501036_0810275
481 Ga0501038_0016825
482 Ga0501039_0053023
483 Ga0501039_0636815
484 Ga0501040_0004510
485 Ga0501040_0207945
486 Ga0501041_0007960
487 Ga0501041_0147748
488 Ga0501042_0002451
489 Ga0501043_0035315
490 Ga0501046_0010385
491 Ga0501048_0001656
492 Ga0501068_0156828
493 Ga0501069_0189741
494 Ga0501069_0221136
495 Ga0501069_0285592
496 Ga0501071_0005762
497 Ga0501072_0004317
498 Ga0501074_0054134
499 Ga0501075_0006683
500 Ga0501076_0007083
501 Ga0501077_0036259
502 Ga0501081_0012084
503 Ga0501045_0017190
504 Ga0501045_0855142
505 Ga0500610_0046495
506 Ga0495595_0010962
507 Ga0495619_0227089
508 Ga0495619_0569473
509 Ga0500578_0139920
510 Ga0500566_0008232
511 Ga0500660_059600
512 Ga0500553_040125
513 Ga0500560_120947
514 Ga0500569_013107
515 Ga0500621_131956
516 Ga0500628_002216
517 Ga0500652_081630
518 Ga0500658_0045314
519 Ga0500561_0078763
520 Ga0500573_0031074
521 Ga0500579_083229
522 Ga0500586_081743
523 Ga0500588_0034546
524 Ga0500600_0007156
525 Ga0500603_150209
526 Ga0500616_0018454
527 Ga0500633_0017057
528 Ga0500634_0026480
529 Ga0500656_000223
530 Ga0500587_006769
531 Ga0501084_0067455
532 Ga0501082_0006430
533 Ga0530510_0049229
534 2643849944
535 2644135946
536 2644444954
537 2644609733
538 2784472107
539 2808874206
540 2812374892
541 2819427633
542 2819666489
543 2819691649
544 2819729571
545 2919450312
546 3001891413

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01066

CDP-OH_P_transf

CDP-alcohol phosphatidyltransferase

35

201

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7drk-assembly1.cif.gz_B crystal structure of phosphatidylglycerol phosphate synthase in complex with cytidine diphosphate-diacylglycerol 0.8728 19 189
7drk-assembly1.cif.gz_B crystal structure of phosphatidylglycerol phosphate synthase in complex with cytidine diphosphate-diacylglycerol 0.8068 19 189
6h53-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis phosphatidylinositol phosphate synthase (pgsa1) in apo form 0.6687 19 192
6h5a-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis phosphatidylinositol phosphate synthase (pgsa1) in complex with manganese and citrate 0.6613 19 190
6h59-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis phosphatidylinositol phosphate synthase (pgsa1) with cdp-dag bound 0.6568 17 190
ID Description Score Start End Superfamily
af_P9WPG5_6_192_1.20.120.1760 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain 0.9463 15 194 1.20.120.1760
af_P9WPG5_6_192_1.20.120.1760 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain 0.9076 15 194 1.20.120.1760
af_P9WPG3_21_202_1.20.120.1760 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain 0.8527 21 190 1.20.120.1760
af_A0A1D6JYP0_117_317_1.20.120.1760 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain 0.8426 17 194 1.20.120.1760
af_Q2FZ11_2_191_1.20.120.1760 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain 0.8322 20 194 1.20.120.1760
ID Description Score Start End GO Terms
AF-A0A6L6EFP3-F1-model_v4 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 0.9866 19 193 GO:0008444
GO:0016020
GO:0046474
AF-A0A1G7WLU5-F1-model_v4 Cardiolipin synthase 0.9787 17 200 GO:0008444
GO:0016020
GO:0046474
AF-A0A543PUX5-F1-model_v4 CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase 0.9705 7 196 GO:0016020
GO:0016780
GO:0046474
AF-A0A849ANL0-F1-model_v4 CDP-alcohol phosphatidyltransferase family protein 0.9693 18 199 GO:0008444
GO:0016020
GO:0046474
AF-A0A853EPR2-F1-model_v4 CDP-alcohol phosphatidyltransferase family protein 0.9687 19 202 GO:0008444
GO:0016020
GO:0046474

Map