F379201

General Info

Members Datasets Scaffolds Average Seq Length
273 176 547 370

Family's Representative Sequence

Representative Sequence 3300045049|Ga0466959_0000010|Ga0466959_0000010_83983_85245
Length 420
Sequence MRNAALSIQHSALSIFKILISHMQPRQLINKTSGIEFIRLLKLSTIAITTGMGLIALLQSCNSSSGEPTENKITAPAAVPATEVVTLQKGMLSSSLQIPGELIAFQQVDLYAKENSFVKKLYADVGTEVKAGQLLATMEAPELNSAASAAESRLKSQEALYLASKSNYDRLLETSQTPGTISQNDLDQALAKKNSDYAQLDAAKAAYREITERKGYLEIRAPFNGIISSRNVNPGAYVGPSGKGSEFPLFTLQEQKKLRLVIFVPEAFTGYLDQQDKVSFNVNAFPNEKFTAQVKRLAGALDSRLRSQRIEMDVANENKRLLPGMVANVNIPLSTKDSTYIVPKTAIVSSQERVFVVRVVNGKAEWVDVKKGRENDGKVEVYGDLKAGDYIVQKASEEVRNGSTLNVKEAAGGKAVGNGQ

Samples

Sample ID Description Type Environment
1 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
101 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
102 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
116 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
117 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
118 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
119 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
120 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
121 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
122 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
155 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
156 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
157 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
158 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
159 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
165 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
166 2738541278 Niastella sp. CF465 Isolate Unclassified
167 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
168 2818991444 Filimonas endophytica 3197 Isolate Unclassified
169 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
170 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
171 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
172 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
173 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
174 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
175 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
176 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.6
Metatranscriptomes 0
Isolates 4.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.19
Nodule 0
Rhizoplane 1.1
Rhizosphere 72.53
Stem 0
Stem Tuber 0
Unclassified 5.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466959_0000010 3300045049 Bacteria 176306
2 MRS1b_contig_4437453 2162886011 Bacteria 1249
3 JGI25157J39369_1006996 3300002741 Bacteria 1666
4 rootH1_10002163 3300003316 Bacteria 2613
5 rootH1_10154699 3300003316 Bacteria 2789
6 rootH2_10219135 3300003320 Bacteria 1544
7 rootL2_10047864 3300003322 Bacteria 7003
8 rootL2_10053807 3300003322 Bacteria 3830
9 rootL2_10068362 3300003322 Bacteria 4587
10 rootL2_10197046 3300003322 Unclassified 4752
11 rootH1_10012550 3300003323 Bacteria 13592
12 rootH1_10022778 3300003323 Bacteria 9031
13 rootH1_10123678 3300003323 Bacteria 9603
14 rootH1_10163911 3300003323 Bacteria 1590
15 rootH1_10181646 3300003316 Unclassified 1466
16 rootH1_10181646 3300003323 Bacteria 3506
17 JGI25160J50197_1000193 3300003354 Bacteria 51332
18 JGI25160J50197_1025517 3300003354 Bacteria 1652
19 Ga0055542_1001830 3300003762 Bacteria 8675
20 Ga0055536_1004921 3300003781 Bacteria 6658
21 Ga0055531_10000071 3300003794 Bacteria 110534
22 Ga0055531_10000086 3300003794 Bacteria 101650
23 Ga0065165_1000300 3300005262 Bacteria 83016
24 Ga0065165_1001279 3300005262 Bacteria 28419
25 Ga0065714_10101658 3300005288 Unclassified 1591
26 Ga0070683_100005440 3300005329 Bacteria 10640
27 Ga0070682_100008873 3300005337 Bacteria 5677
28 Ga0068868_100047806 3300005338 Bacteria 3355
29 Ga0070660_100004013 3300005339 Bacteria 10161
30 Ga0070661_100029809 3300005344 Bacteria 3940
31 Ga0070675_100020132 3300005354 Bacteria 5324
32 Ga0070671_100022357 3300005355 Bacteria 5164
33 Ga0070673_100023400 3300005364 Bacteria 4513
34 Ga0070659_100003761 3300005366 Bacteria 10825
35 Ga0070667_100059056 3300005367 Bacteria 3244
36 Ga0070678_100231944 3300005456 Bacteria 1539
37 Ga0070662_100019222 3300005457 Bacteria 4636
38 Ga0070681_10121049 3300005458 Unclassified 2552
39 Ga0070684_100020786 3300005535 Bacteria 5447
40 Ga0070684_100056339 3300005535 Bacteria 3430
41 Ga0068853_100140723 3300005539 Bacteria 2166
42 Ga0068853_100160343 3300005539 Bacteria 2029
43 Ga0070693_100089628 3300005547 Bacteria 1852
44 Ga0068855_100001157 3300005563 Bacteria 32696
45 Ga0068855_100007523 3300005563 Bacteria 13184
46 Ga0068855_100038232 3300005563 Bacteria 5703
47 Ga0068855_100054129 3300005563 Bacteria 4717
48 Ga0070664_100045073 3300005564 Bacteria 3724
49 Ga0068857_100010028 3300005577 Bacteria 8227
50 Ga0068857_100035252 3300005577 Bacteria 4431
51 Ga0068854_100033573 3300005578 Bacteria 3578
52 Ga0068856_100004590 3300005614 Bacteria 13736
53 Ga0068852_100013588 3300005616 Bacteria 6233
54 Ga0068852_100144800 3300005616 Bacteria 2203
55 Ga0068863_100041218 3300005841 Bacteria 4390
56 Ga0068860_100004100 3300005843 Bacteria 14926
57 Ga0068860_100030023 3300005843 Bacteria 5228
58 Ga0081540_1019663 3300005983 Bacteria 4093
59 Ga0075366_10010159 3300006195 Bacteria 5280
60 Ga0075366_10039806 3300006195 Bacteria 2778
61 Ga0097621_100000278 3300006237 Bacteria 34561
62 Ga0097621_100013178 3300006237 Bacteria 6151
63 Ga0097621_100075590 3300006237 Unclassified 2793
64 Ga0068871_100000825 3300006358 Bacteria 20742
65 Ga0075428_100023884 3300006844 Bacteria 6765
66 Ga0068865_100105401 3300006881 Bacteria 2071
67 Ga0105240_10000224 3300009093 Bacteria 113175
68 Ga0105240_10004368 3300009093 Bacteria 21581
69 Ga0105240_10155893 3300009093 Bacteria 2716
70 Ga0105240_10176627 3300009093 Unclassified 2524
71 Ga0111539_10014637 3300009094 Bacteria 9789
72 Ga0111539_10018579 3300009094 Bacteria 8613
73 Ga0111539_10044464 3300009094 Bacteria 5321
74 Ga0105247_10185315 3300009101 Bacteria 1391
75 Ga0114129_10002497 3300009147 Bacteria 25516
76 Ga0105241_10017085 3300009174 Bacteria 5328
77 Ga0105248_10024743 3300009177 Bacteria 6677
78 Ga0105237_10000052 3300009545 Bacteria 160459
79 Ga0105237_10001529 3300009545 Bacteria 30313
80 Ga0105237_10040622 3300009545 Bacteria 4691
81 Ga0105237_10043871 3300009545 Bacteria 4503
82 Ga0105237_10092192 3300009545 Bacteria 3020
83 Ga0105237_10231802 3300009545 Unclassified 1847
84 Ga0105238_10019185 3300009551 Bacteria 6967
85 Ga0105238_10026888 3300009551 Bacteria 5864
86 Ga0105239_10000370 3300010375 Bacteria 66106
87 Ga0105239_10001154 3300010375 Bacteria 36333
88 Ga0105239_10001735 3300010375 Bacteria 28734
89 Ga0105239_10286634 3300010375 Bacteria 1854
90 Ga0105239_10452568 3300010375 Bacteria 1457
91 Ga0157373_10000260 3300013100 Bacteria 43054
92 Ga0157373_10001845 3300013100 Bacteria 16096
93 Ga0157373_10031978 3300013100 Bacteria 3789
94 Ga0157373_10046624 3300013100 Unclassified 3093
95 Ga0157371_10019926 3300013102 Bacteria 4942
96 Ga0157371_10023351 3300013102 Bacteria 4522
97 Ga0157370_10289339 3300013104 Bacteria 1513
98 Ga0157374_10008342 3300013296 Bacteria 8844
99 Ga0157374_10062194 3300013296 Unclassified 3498
100 Ga0157374_10187118 3300013296 Bacteria 2025
101 Ga0157374_10459076 3300013296 Bacteria 1276
102 Ga0157378_10012006 3300013297 Bacteria 7583
103 Ga0157378_10012822 3300013297 Bacteria 7336
104 Ga0157378_10021898 3300013297 Bacteria 5620
105 Ga0157378_10039954 3300013297 Bacteria 4161
106 Ga0157378_10261232 3300013297 Bacteria 1661
107 Ga0163162_10000499 3300013306 Bacteria 36534
108 Ga0163162_10003033 3300013306 Bacteria 16038
109 Ga0163162_10003248 3300013306 Bacteria 15541
110 Ga0163162_10104296 3300013306 Bacteria 2930
111 Ga0163162_10152569 3300013306 Bacteria 2429
112 Ga0157372_10002120 3300013307 Bacteria 21568
113 Ga0157372_10006049 3300013307 Bacteria 12855
114 Ga0157372_10022751 3300013307 Bacteria 6785
115 Ga0157372_10065991 3300013307 Bacteria 4065
116 Ga0157375_10006853 3300013308 Bacteria 9931
117 Ga0157375_10092467 3300013308 Bacteria 3089
118 Ga0163163_10003168 3300014325 Bacteria 13931
119 Ga0157377_10010009 3300014745 Bacteria 4677
120 Ga0157379_10040652 3300014968 Unclassified 4151
121 Ga0157376_10000470 3300014969 Bacteria 25946
122 Ga0157376_10076712 3300014969 Bacteria 2856
123 Ga0182005_1000058 3300015265 Bacteria 102314
124 Ga0163161_10003816 3300017792 Bacteria 10566
125 Ga0163161_10006660 3300017792 Bacteria 7995
126 Ga0209436_100303 3300025208 Bacteria 22703
127 Ga0209258_100628 3300025242 Bacteria 27909
128 Ga0209646_1000838 3300025246 Bacteria 10359
129 Ga0209026_1000239 3300025250 Bacteria 71740
130 Ga0209148_1000559 3300025254 Bacteria 35257
131 Ga0209130_1009987 3300025284 Bacteria 2651
132 Ga0209676_1000425 3300025292 Bacteria 74151
133 Ga0209050_1007600 3300025298 Bacteria 6025
134 Ga0207426_1000026 3300025302 Bacteria 515228
135 Ga0207426_1000345 3300025302 Bacteria 85840
136 Ga0209257_1000001 3300025304 Bacteria 2274655
137 Ga0209257_1000023 3300025304 Bacteria 753019
138 Ga0207647_10012375 3300025904 Bacteria 5941
139 Ga0207654_10002154 3300025911 Bacteria 10083
140 Ga0207695_10000110 3300025913 Bacteria 250079
141 Ga0207695_10000812 3300025913 Bacteria 58133
142 Ga0207695_10109665 3300025913 Bacteria 2741
143 Ga0207695_10173113 3300025913 Unclassified 2083
144 Ga0207671_10004509 3300025914 Bacteria 13258
145 Ga0207671_10012284 3300025914 Bacteria 6897
146 Ga0207671_10020840 3300025914 Bacteria 4985
147 Ga0207671_10065952 3300025914 Bacteria 2693
148 Ga0207657_10004306 3300025919 Bacteria 15087
149 Ga0207652_10051772 3300025921 Bacteria 3522
150 Ga0207659_10009026 3300025926 Bacteria 6216
151 Ga0207644_10007894 3300025931 Bacteria 6958
152 Ga0207690_10017556 3300025932 Bacteria 4372
153 Ga0207706_10002436 3300025933 Bacteria 18157
154 Ga0207706_10097274 3300025933 Bacteria 2589
155 Ga0207704_10152965 3300025938 Bacteria 1630
156 Ga0207679_10051477 3300025945 Bacteria 3014
157 Ga0207667_10000144 3300025949 Bacteria 108295
158 Ga0207667_10010758 3300025949 Bacteria 10672
159 Ga0207667_10031339 3300025949 Bacteria 5740
160 Ga0207667_10039483 3300025949 Bacteria 5031
161 Ga0207651_10131546 3300025960 Unclassified 1916
162 Ga0207651_10288326 3300025960 Bacteria 1360
163 Ga0207640_10023123 3300025981 Bacteria 3732
164 Ga0207658_10059587 3300025986 Bacteria 2845
165 Ga0207674_10212201 3300026116 Bacteria 1885
166 Ga0207698_10122613 3300026142 Bacteria 2203
167 Ga0268266_10345198 3300028379 Bacteria 1398
168 Ga0268264_10003285 3300028381 Bacteria 13982
169 Ga0268264_10036696 3300028381 Bacteria 4039
170 Ga0307517_10006051 3300028786 Bacteria 18029
171 Ga0307515_10000181 3300028794 Bacteria 154316
172 Ga0307515_10011754 3300028794 Bacteria 16566
173 Ga0265338_10029273 3300028800 Bacteria 5463
174 Ga0307511_10000808 3300030521 Bacteria 33418
175 Ga0316176_1048616 3300030732 Bacteria 40116
176 Ga0316183_1175472 3300030742 Bacteria 18288
177 Ga0265327_10000009 3300031251 Bacteria 616360
178 Ga0265327_10000031 3300031251 Bacteria 325718
179 Ga0265327_10004503 3300031251 Bacteria 12302
180 Ga0265327_10042677 3300031251 Bacteria 2433
181 Ga0307513_10064736 3300031456 Bacteria 3850
182 Ga0307509_10024045 3300031507 Bacteria 6830
183 Ga0307509_10258741 3300031507 Bacteria 1518
184 Ga0307508_10001074 3300031616 Bacteria 31630
185 Ga0307405_10023054 3300031731 Bacteria 3531
186 Ga0307507_10000036 3300033179 Bacteria 187512
187 Ga0373955_0082055 3300035172 Unclassified 1824
188 Ga0395899_0001920 3300037312 Bacteria 17146
189 Ga0395899_0004891 3300037312 Bacteria 10430
190 Ga0395900_0001300 3300037418 Bacteria 30387
191 Ga0395900_0014586 3300037418 Bacteria 8017
192 Ga0395898_0005862 3300037466 Bacteria 13213
193 Ga0395905_0001841 3300037471 Bacteria 24475
194 Ga0395905_0003680 3300037471 Bacteria 16238
195 Ga0395901_0000722 3300038443 Bacteria 37562
196 Ga0395901_0008491 3300038443 Bacteria 10381
197 Ga0439436_0015668 3300041404 Bacteria 2278
198 Ga0439445_0004804 3300042004 Bacteria 3066
199 Ga0439462_0005021 3300042015 Bacteria 3247
200 Ga0466969_0000191 3300044656 Bacteria 32966
201 Ga0466972_0000002 3300044658 Bacteria 408005
202 Ga0466972_0000011 3300044658 Bacteria 249697
203 Ga0466972_0001912 3300044658 Bacteria 10219
204 Ga0466972_0082647 3300044658 Bacteria 1528
205 Ga0466966_0000341 3300044684 Bacteria 30134
206 Ga0466964_0082194 3300044706 Bacteria 1385
207 Ga0466970_0000988 3300044765 Bacteria 13684
208 Ga0466957_0000864 3300044842 Bacteria 15557
209 Ga0466957_0038107 3300044842 Bacteria 2896
210 Ga0466959_0030648 3300045049 Bacteria 3982
211 Ga0466958_0055522 3300045836 Bacteria 2404
212 Ga0466967_0069502 3300045976 Unclassified 3148
213 Ga0495592_0042736 3300046454 Bacteria 3394
214 Ga0495629_0024293 3300046459 Bacteria 4315
215 Ga0495638_0000003 3300046460 Bacteria 888792
216 Ga0495638_0170913 3300046460 Bacteria 1247
217 Ga0495580_0086677 3300046472 Bacteria 2181
218 Ga0495648_0006352 3300046524 Bacteria 9664
219 Ga0495648_0023590 3300046524 Bacteria 4208
220 Ga0495633_0000032 3300046558 Bacteria 193765
221 Ga0495633_0000039 3300046558 Bacteria 180652
222 Ga0495668_0000009 3300046616 Bacteria 492623
223 Ga0495625_0000636 3300046660 Bacteria 50443
224 Ga0495625_0006247 3300046660 Bacteria 10668
225 Ga0495636_0000018 3300047318 Bacteria 77559
226 Ga0495674_0070878 3300047319 Bacteria 3011
227 Ga0495672_0028861 3300047320 Bacteria 3503
228 Ga0495687_000001 3300047443 Bacteria 1215582
229 Ga0495684_0252143 3300047471 Unclassified 1284
230 Ga0495614_0022535 3300048089 Bacteria 2718
231 Ga0496101_0121377 3300048904 Bacteria 1976
232 Ga0496110_0141183 3300048913 Unclassified 2178
233 Ga0496114_0001847 3300048917 Bacteria 16038
234 Ga0496126_0014154 3300048929 Bacteria 8073
235 Ga0501034_0108789 3300049571 Bacteria 2763
236 Ga0501038_0019220 3300049574 Bacteria 6161
237 Ga0501047_0047194 3300049581 Bacteria 4161
238 Ga0501047_0067673 3300049581 Bacteria 3441
239 Ga0501047_0145615 3300049581 Bacteria 2246
240 Ga0501225_0000709 3300049705 Bacteria 10469
241 Ga0501241_000535 3300049758 Bacteria 8145
242 Ga0501035_0040182 3300049822 Bacteria 4229
243 Ga0501044_0027200 3300049823 Bacteria 6047
244 Ga0501044_0064935 3300049823 Bacteria 3723
245 nmdc:mga0k408_104095_c1 3300050493 Bacteria 1675
246 nmdc:mga05p37_26001_c1 3300050507 Bacteria 7116
247 nmdc:mga0qj67_300026_c1 3300050509 Bacteria 1301
248 Ga0500578_0000190 3300053086 Bacteria 74445
249 Ga0500583_0000004 3300053092 Bacteria 174723
250 Ga0500651_0021212 3300053093 Bacteria 4049
251 Ga0500650_0084494 3300053098 Bacteria 1485
252 Ga0500562_000016 3300053108 Bacteria 131323
253 Ga0500618_000015 3300053125 Bacteria 175864
254 Ga0500559_0024623 3300053136 Bacteria 2562
255 Ga0500604_0004432 3300053151 Bacteria 3727
256 Ga0500616_0000007 3300053153 Bacteria 836875
257 Ga0500616_0014841 3300053153 Bacteria 4466
258 Ga0500622_0000010 3300053156 Bacteria 398804
259 Ga0500622_0000035 3300053156 Bacteria 182924
260 Ga0500622_0002034 3300053156 Bacteria 15089
261 Ga0500622_0002596 3300053156 Bacteria 12873
262 Ga0500645_020863 3300053730 Bacteria 2026
263 2522551032 2522125168 Bacteria 7376607
264 2738727474 2738541278 Bacteria 9755573
265 2819574275 2818991442 Bacteria 8318214
266 2819586907 2818991444 Bacteria 6968812
267 2819679502 2818991460 Bacteria 7595395
268 2821137598 2821136567 Bacteria 8080116
269 2840679351 2840677318 Bacteria 2664183
270 2842904119 2842903701 Bacteria 6986368
271 2896087162 2896085136 Bacteria 6129793
272 2904467664 2904467357 Bacteria 8057758
273 2929156952 2929154850 Bacteria 6753285
274 2929242095 2929239360 Bacteria 7745570
275 Ga0466959_0000010
276 MRS1b_contig_4437453
277 JGI25157J39369_1006996
278 rootH1_10002163
279 rootH1_10154699
280 rootH2_10219135
281 rootL2_10047864
282 rootL2_10053807
283 rootL2_10068362
284 rootL2_10197046
285 rootH1_10012550
286 rootH1_10022778
287 rootH1_10123678
288 rootH1_10163911
289 rootH1_10181646
290 JGI25160J50197_1000193
291 JGI25160J50197_1025517
292 Ga0055542_1001830
293 Ga0055536_1004921
294 Ga0055531_10000071
295 Ga0055531_10000086
296 Ga0065165_1000300
297 Ga0065165_1001279
298 Ga0065714_10101658
299 Ga0070683_100005440
300 Ga0070682_100008873
301 Ga0068868_100047806
302 Ga0070660_100004013
303 Ga0070661_100029809
304 Ga0070675_100020132
305 Ga0070671_100022357
306 Ga0070673_100023400
307 Ga0070659_100003761
308 Ga0070667_100059056
309 Ga0070678_100231944
310 Ga0070662_100019222
311 Ga0070681_10121049
312 Ga0070684_100020786
313 Ga0070684_100056339
314 Ga0068853_100140723
315 Ga0068853_100160343
316 Ga0070693_100089628
317 Ga0068855_100001157
318 Ga0068855_100007523
319 Ga0068855_100038232
320 Ga0068855_100054129
321 Ga0070664_100045073
322 Ga0068857_100010028
323 Ga0068857_100035252
324 Ga0068854_100033573
325 Ga0068856_100004590
326 Ga0068852_100013588
327 Ga0068852_100144800
328 Ga0068863_100041218
329 Ga0068860_100004100
330 Ga0068860_100030023
331 Ga0081540_1019663
332 Ga0075366_10010159
333 Ga0075366_10039806
334 Ga0097621_100000278
335 Ga0097621_100013178
336 Ga0097621_100075590
337 Ga0068871_100000825
338 Ga0075428_100023884
339 Ga0068865_100105401
340 Ga0105240_10000224
341 Ga0105240_10004368
342 Ga0105240_10155893
343 Ga0105240_10176627
344 Ga0111539_10014637
345 Ga0111539_10018579
346 Ga0111539_10044464
347 Ga0105247_10185315
348 Ga0114129_10002497
349 Ga0105241_10017085
350 Ga0105248_10024743
351 Ga0105237_10000052
352 Ga0105237_10001529
353 Ga0105237_10040622
354 Ga0105237_10043871
355 Ga0105237_10092192
356 Ga0105237_10231802
357 Ga0105238_10019185
358 Ga0105238_10026888
359 Ga0105239_10000370
360 Ga0105239_10001154
361 Ga0105239_10001735
362 Ga0105239_10286634
363 Ga0105239_10452568
364 Ga0157373_10000260
365 Ga0157373_10001845
366 Ga0157373_10031978
367 Ga0157373_10046624
368 Ga0157371_10019926
369 Ga0157371_10023351
370 Ga0157370_10289339
371 Ga0157374_10008342
372 Ga0157374_10062194
373 Ga0157374_10187118
374 Ga0157374_10459076
375 Ga0157378_10012006
376 Ga0157378_10012822
377 Ga0157378_10021898
378 Ga0157378_10039954
379 Ga0157378_10261232
380 Ga0163162_10000499
381 Ga0163162_10003033
382 Ga0163162_10003248
383 Ga0163162_10104296
384 Ga0163162_10152569
385 Ga0157372_10002120
386 Ga0157372_10006049
387 Ga0157372_10022751
388 Ga0157372_10065991
389 Ga0157375_10006853
390 Ga0157375_10092467
391 Ga0163163_10003168
392 Ga0157377_10010009
393 Ga0157379_10040652
394 Ga0157376_10000470
395 Ga0157376_10076712
396 Ga0182005_1000058
397 Ga0163161_10003816
398 Ga0163161_10006660
399 Ga0209436_100303
400 Ga0209258_100628
401 Ga0209646_1000838
402 Ga0209026_1000239
403 Ga0209148_1000559
404 Ga0209130_1009987
405 Ga0209676_1000425
406 Ga0209050_1007600
407 Ga0207426_1000026
408 Ga0207426_1000345
409 Ga0209257_1000001
410 Ga0209257_1000023
411 Ga0207647_10012375
412 Ga0207654_10002154
413 Ga0207695_10000110
414 Ga0207695_10000812
415 Ga0207695_10109665
416 Ga0207695_10173113
417 Ga0207671_10004509
418 Ga0207671_10012284
419 Ga0207671_10020840
420 Ga0207671_10065952
421 Ga0207657_10004306
422 Ga0207652_10051772
423 Ga0207659_10009026
424 Ga0207644_10007894
425 Ga0207690_10017556
426 Ga0207706_10002436
427 Ga0207706_10097274
428 Ga0207704_10152965
429 Ga0207679_10051477
430 Ga0207667_10000144
431 Ga0207667_10010758
432 Ga0207667_10031339
433 Ga0207667_10039483
434 Ga0207651_10131546
435 Ga0207651_10288326
436 Ga0207640_10023123
437 Ga0207658_10059587
438 Ga0207674_10212201
439 Ga0207698_10122613
440 Ga0268266_10345198
441 Ga0268264_10003285
442 Ga0268264_10036696
443 Ga0307517_10006051
444 Ga0307515_10000181
445 Ga0307515_10011754
446 Ga0265338_10029273
447 Ga0307511_10000808
448 Ga0316176_1048616
449 Ga0316183_1175472
450 Ga0265327_10000009
451 Ga0265327_10000031
452 Ga0265327_10004503
453 Ga0265327_10042677
454 Ga0307513_10064736
455 Ga0307509_10024045
456 Ga0307509_10258741
457 Ga0307508_10001074
458 Ga0307405_10023054
459 Ga0307507_10000036
460 Ga0373955_0082055
461 Ga0395899_0001920
462 Ga0395899_0004891
463 Ga0395900_0001300
464 Ga0395900_0014586
465 Ga0395898_0005862
466 Ga0395905_0001841
467 Ga0395905_0003680
468 Ga0395901_0000722
469 Ga0395901_0008491
470 Ga0439436_0015668
471 Ga0439445_0004804
472 Ga0439462_0005021
473 Ga0466969_0000191
474 Ga0466972_0000002
475 Ga0466972_0000011
476 Ga0466972_0001912
477 Ga0466972_0082647
478 Ga0466966_0000341
479 Ga0466964_0082194
480 Ga0466970_0000988
481 Ga0466957_0000864
482 Ga0466957_0038107
483 Ga0466959_0030648
484 Ga0466958_0055522
485 Ga0466967_0069502
486 Ga0495592_0042736
487 Ga0495629_0024293
488 Ga0495638_0000003
489 Ga0495638_0170913
490 Ga0495580_0086677
491 Ga0495648_0006352
492 Ga0495648_0023590
493 Ga0495633_0000032
494 Ga0495633_0000039
495 Ga0495668_0000009
496 Ga0495625_0000636
497 Ga0495625_0006247
498 Ga0495636_0000018
499 Ga0495674_0070878
500 Ga0495672_0028861
501 Ga0495687_000001
502 Ga0495684_0252143
503 Ga0495614_0022535
504 Ga0496101_0121377
505 Ga0496110_0141183
506 Ga0496114_0001847
507 Ga0496126_0014154
508 Ga0501034_0108789
509 Ga0501038_0019220
510 Ga0501047_0047194
511 Ga0501047_0067673
512 Ga0501047_0145615
513 Ga0501225_0000709
514 Ga0501241_000535
515 Ga0501035_0040182
516 Ga0501044_0027200
517 Ga0501044_0064935
518 nmdc:mga0k408_104095_c1
519 nmdc:mga05p37_26001_c1
520 nmdc:mga0qj67_300026_c1
521 Ga0500578_0000190
522 Ga0500583_0000004
523 Ga0500651_0021212
524 Ga0500650_0084494
525 Ga0500562_000016
526 Ga0500618_000015
527 Ga0500559_0024623
528 Ga0500604_0004432
529 Ga0500616_0000007
530 Ga0500616_0014841
531 Ga0500622_0000010
532 Ga0500622_0000035
533 Ga0500622_0002034
534 Ga0500622_0002596
535 Ga0500645_020863
536 2522551032
537 2738727474
538 2819574275
539 2819586907
540 2819679502
541 2821137598
542 2840679351
543 2842904119
544 2896087162
545 2904467664
546 2929156952
547 2929242095

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13437

HlyD_3

HlyD family secretion protein

218

324

0.88

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

92

327

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2v0o-assembly2.cif.gz_C fcho2 f-bar domain 0.9206 79 154
8afz-assembly1.cif.gz_A architecture of the escpe-1 membrane coat 0.9134 82 154
3mxz-assembly1.cif.gz_A crystal structure of tubulin folding cofactor a from arabidopsis thaliana 0.8986 79 153
7ybu-assembly1.cif.gz_A human propionyl-coenzyme a carboxylase 0.8747 46 189
5ks8-assembly1.cif.gz_C crystal structure of two-subunit pyruvate carboxylase from methylobacillus flagellatus 0.8726 47 191
ID Description Score Start End Superfamily
2f1mB03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9693 79 149 1.10.287.470
2f1mA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9585 79 149 1.10.287.470
2f1mD03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9547 79 149 1.10.287.470
af_P75830_95_182_6.10.140.1990 Special;Helix non-globular;Helix Hairpins; 0.9489 79 154 6.10.140.1990
af_C6T5I8_1_113_1.20.58.90 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.9386 79 154 1.20.58.90
ID Description Score Start End GO Terms
AF-B6IWX5-F1-model_v4 Efflux transporter component, putative 0.9258 40 191 GO:0015562
GO:1990281
AF-A0A0N7LPY0-F1-model_v4 Efflux pump periplasmic linker BepF 0.8704 33 269 GO:0005886
GO:0015562
GO:0030313
GO:0046677
AF-A0A850K9D2-F1-model_v4 deleted 0.8609 34 267
AF-A0A2E5C5H9-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8609 192 266 GO:0015562
GO:1990281
AF-A0A4Z0IHK2-F1-model_v4 deleted 0.8472 35 274

Map