F378757

General Info

Members Datasets Scaffolds Average Seq Length
273 154 546 437

Family's Representative Sequence

Representative Sequence 3300000546|LJNas_1000944|LJNas_10009442
Length 489
Sequence MTSTNEQSAVKTPARPRVVVLGAGFGGLNAALALGSMAVDVTVIDRRNHHTFQPLLYQVALGVLSPADIAEPIRTVLRHKNNVEVVMDEAVGFDVDRQIVQLRSGTEIVYDYLIVATGSTHSYFGHDDWSKLAPGLKTLEDATEIRRRIMLAYELAEREAVETGKHPPLNFVVVGGGPTGVELAGAIRDIASLYLRDDYRHIDTAKTRVLLIEGGPHIVPSYPPDLQQKAVEQLQSLGVEVITGKTVTDVEPGYVVLGKPPETERIDALVILWAAGVQASPLGKMLGVPVNRKGAVTVDEYLNPPGHRNIFICGDLAEVTEHGKPVPGVAQPAMQMGTQAAHMIEADIEGKARKPFHYFDKGDMATIGRNRAIADVKWPFKAHLGGWPAWISWGLVHIYFLIGFRSRIAVMFQWAWTYLTLGHGARLITGNQRLPGWKQAVPGRTPVDVGPLDLASPANFDLPSEPSSAPHNAEQLPVVSSKSSQEATA

Samples

Sample ID Description Type Environment
1 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
117 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
123 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
124 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
149 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
150 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
151 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
152 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
153 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
154 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.97
Metatranscriptomes 0.73
Isolates 3.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.47
Nodule 0
Rhizoplane 3.66
Rhizosphere 86.45
Stem 0
Stem Tuber 0
Unclassified 5.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1000944 3300000546 Bacteria 4657
2 JGI24737J22298_10000420 3300001990 Bacteria 14539
3 JGI24735J21928_10000002 3300002067 Bacteria 624895
4 JGI24735J21928_10000004 3300002067 Bacteria 381713
5 rootH1_10019650 3300003316 Bacteria 10648
6 rootH1_10034282 3300003316 Bacteria 9753
7 rootH2_10005719 3300003320 Bacteria 108734
8 rootH2_10007152 3300003320 Bacteria 3960
9 rootH2_10032514 3300003320 Bacteria 2835
10 rootH2_10034253 3300003320 Bacteria 4356
11 rootH2_10053112 3300003320 Bacteria 5359
12 rootL2_10155366 3300003322 Bacteria 3490
13 rootH1_10002666 3300003323 Bacteria 23641
14 rootH1_10149388 3300003323 Bacteria 1631
15 rootH1_10334830 3300003323 Bacteria 1467
16 rootH1_10335381 3300003323 Bacteria 1537
17 Ga0058863_10839860 3300004799 Bacteria 1857
18 Ga0070658_10000011 3300005327 Bacteria 294396
19 Ga0070676_10000277 3300005328 Bacteria 22624
20 Ga0068868_100005721 3300005338 Bacteria 8753
21 Ga0070689_100000031 3300005340 Bacteria 93387
22 Ga0070687_100001327 3300005343 Bacteria 8647
23 Ga0070661_100016656 3300005344 Bacteria 5200
24 Ga0070668_100011133 3300005347 Bacteria 6697
25 Ga0070675_100003530 3300005354 Bacteria 11860
26 Ga0070671_100007413 3300005355 Bacteria 8769
27 Ga0070671_100018311 3300005355 Bacteria 5688
28 Ga0070674_100050544 3300005356 Bacteria 2862
29 Ga0070673_100000276 3300005364 Bacteria 26517
30 Ga0070673_100003782 3300005364 Bacteria 9493
31 Ga0070688_100000612 3300005365 Bacteria 17859
32 Ga0070700_100000180 3300005441 Bacteria 35814
33 Ga0070700_100047622 3300005441 Bacteria 2653
34 Ga0070678_100002362 3300005456 Bacteria 10307
35 Ga0070662_100000032 3300005457 Bacteria 78824
36 Ga0070662_100001985 3300005457 Bacteria 12549
37 Ga0070681_10156497 3300005458 Bacteria 2203
38 Ga0068867_100000449 3300005459 Bacteria 27332
39 Ga0068867_100001414 3300005459 Bacteria 16594
40 Ga0070685_10000421 3300005466 Bacteria 24908
41 Ga0068853_100008727 3300005539 Bacteria 8154
42 Ga0068853_100089036 3300005539 Unclassified 2710
43 Ga0068853_100114996 3300005539 Bacteria 2394
44 Ga0070672_100000407 3300005543 Bacteria 24940
45 Ga0070686_100000517 3300005544 Bacteria 23112
46 Ga0070696_100016773 3300005546 Bacteria 4941
47 Ga0070665_100000003 3300005548 Bacteria 811857
48 Ga0070665_100031192 3300005548 Bacteria 5365
49 Ga0070665_100080009 3300005548 Bacteria 3273
50 Ga0068855_100000042 3300005563 Bacteria 149332
51 Ga0068855_100008730 3300005563 Bacteria 12253
52 Ga0068855_100010454 3300005563 Bacteria 11197
53 Ga0068855_100106954 3300005563 Bacteria 3214
54 Ga0068855_100143647 3300005563 Bacteria 2718
55 Ga0070664_100193730 3300005564 Unclassified 1812
56 Ga0068856_100000229 3300005614 Bacteria 61008
57 Ga0068856_100001512 3300005614 Bacteria 24373
58 Ga0068856_100111277 3300005614 Bacteria 2736
59 Ga0068856_100148356 3300005614 Bacteria 2353
60 Ga0068852_100002452 3300005616 Bacteria 12774
61 Ga0068859_100124116 3300005617 Unclassified 2650
62 Ga0068861_100003573 3300005719 Bacteria 10345
63 Ga0068858_100073710 3300005842 Unclassified 3169
64 Ga0068858_100215843 3300005842 Unclassified 1816
65 Ga0081538_10000847 3300005981 Bacteria 33018
66 Ga0075366_10092815 3300006195 Bacteria 1809
67 Ga0097621_100000165 3300006237 Bacteria 41398
68 Ga0097621_100021708 3300006237 Unclassified 4972
69 Ga0068871_100000018 3300006358 Bacteria 89690
70 Ga0068865_100000396 3300006881 Bacteria 24307
71 Ga0068865_100051935 3300006881 Unclassified 2839
72 Ga0097620_100124116 3300006931 Unclassified 2650
73 Ga0105240_10000237 3300009093 Bacteria 109895
74 Ga0105240_10022011 3300009093 Bacteria 8465
75 Ga0105240_10029393 3300009093 Bacteria 7160
76 Ga0105240_10135590 3300009093 Bacteria 2948
77 Ga0105240_10202317 3300009093 Bacteria 2327
78 Ga0111539_10071577 3300009094 Bacteria 4091
79 Ga0105245_10008356 3300009098 Bacteria 9044
80 Ga0105241_10000098 3300009174 Bacteria 64907
81 Ga0105241_10003076 3300009174 Bacteria 12441
82 Ga0105241_10012852 3300009174 Bacteria 6143
83 Ga0105242_10005497 3300009176 Bacteria 9783
84 Ga0105248_10001714 3300009177 Bacteria 24367
85 Ga0105248_10411869 3300009177 Bacteria 1522
86 Ga0105248_10423531 3300009177 Bacteria 1499
87 Ga0105237_10000224 3300009545 Bacteria 79854
88 Ga0105237_10000952 3300009545 Bacteria 38921
89 Ga0105237_10001604 3300009545 Bacteria 29361
90 Ga0105237_10003309 3300009545 Bacteria 19208
91 Ga0105237_10051168 3300009545 Bacteria 4149
92 Ga0105249_10003876 3300009553 Bacteria 12917
93 Ga0105239_10000002 3300010375 Bacteria 610298
94 Ga0105239_10000013 3300010375 Bacteria 327371
95 Ga0105239_10004436 3300010375 Bacteria 16776
96 Ga0105239_10012931 3300010375 Bacteria 9286
97 Ga0105239_10014078 3300010375 Bacteria 8880
98 Ga0105239_10055129 3300010375 Bacteria 4360
99 Ga0105239_10070079 3300010375 Bacteria 3851
100 Ga0157371_10018023 3300013102 Bacteria 5229
101 Ga0157371_10042282 3300013102 Bacteria 3248
102 Ga0157370_10064530 3300013104 Bacteria 3467
103 Ga0157369_10002502 3300013105 Bacteria 22008
104 Ga0157369_10028857 3300013105 Bacteria 6137
105 Ga0157374_10000348 3300013296 Bacteria 42744
106 Ga0157374_10159296 3300013296 Bacteria 2198
107 Ga0157374_10234893 3300013296 Bacteria 1802
108 Ga0157378_10000771 3300013297 Bacteria 29721
109 Ga0157378_10084996 3300013297 Bacteria 2866
110 Ga0163162_10000031 3300013306 Bacteria 157666
111 Ga0163162_10006339 3300013306 Bacteria 11456
112 Ga0163162_10009851 3300013306 Bacteria 9295
113 Ga0163162_10042726 3300013306 Bacteria 4538
114 Ga0163162_10127518 3300013306 Bacteria 2652
115 Ga0163162_10241209 3300013306 Bacteria 1938
116 Ga0157372_10000001 3300013307 Bacteria 791349
117 Ga0157372_10084127 3300013307 Bacteria 3605
118 Ga0157375_10008638 3300013308 Bacteria 8922
119 Ga0157375_10017987 3300013308 Bacteria 6400
120 Ga0163163_10162291 3300014325 Bacteria 2280
121 Ga0157376_10012004 3300014969 Bacteria 6410
122 Ga0157376_10064935 3300014969 Bacteria 3080
123 Ga0197907_10881124 3300020069 Bacteria 1708
124 Ga0209455_1004024 3300025272 Bacteria 4975
125 Ga0207680_10003247 3300025903 Bacteria 7656
126 Ga0207647_10000042 3300025904 Bacteria 91917
127 Ga0207647_10009325 3300025904 Bacteria 6978
128 Ga0207647_10081867 3300025904 Bacteria 1934
129 Ga0207645_10000650 3300025907 Bacteria 28882
130 Ga0207645_10105743 3300025907 Unclassified 1819
131 Ga0207705_10000015 3300025909 Bacteria 382901
132 Ga0207705_10112946 3300025909 Bacteria 2009
133 Ga0207654_10001029 3300025911 Bacteria 15243
134 Ga0207654_10026507 3300025911 Bacteria 3139
135 Ga0207695_10000013 3300025913 Bacteria 821265
136 Ga0207695_10005995 3300025913 Bacteria 15895
137 Ga0207695_10012058 3300025913 Bacteria 10392
138 Ga0207695_10098383 3300025913 Bacteria 2925
139 Ga0207671_10001649 3300025914 Bacteria 25415
140 Ga0207671_10002707 3300025914 Bacteria 18581
141 Ga0207671_10010431 3300025914 Bacteria 7664
142 Ga0207671_10010699 3300025914 Bacteria 7545
143 Ga0207657_10083783 3300025919 Bacteria 2674
144 Ga0207652_10192806 3300025921 Bacteria 1833
145 Ga0207694_10030177 3300025924 Bacteria 4140
146 Ga0207650_10029155 3300025925 Unclassified 3964
147 Ga0207644_10004079 3300025931 Bacteria 9474
148 Ga0207706_10000191 3300025933 Bacteria 68535
149 Ga0207706_10004949 3300025933 Bacteria 12449
150 Ga0207706_10066734 3300025933 Bacteria 3167
151 Ga0207670_10000040 3300025936 Bacteria 102329
152 Ga0207669_10001463 3300025937 Bacteria 10072
153 Ga0207704_10000053 3300025938 Bacteria 79904
154 Ga0207704_10060291 3300025938 Unclassified 2347
155 Ga0207691_10003763 3300025940 Bacteria 14729
156 Ga0207711_10005840 3300025941 Bacteria 10394
157 Ga0207667_10000037 3300025949 Bacteria 297252
158 Ga0207667_10023830 3300025949 Bacteria 6737
159 Ga0207667_10041354 3300025949 Bacteria 4903
160 Ga0207651_10000749 3300025960 Bacteria 13935
161 Ga0207712_10035719 3300025961 Bacteria 3379
162 Ga0207668_10009362 3300025972 Bacteria 5866
163 Ga0207677_10005788 3300026023 Bacteria 6724
164 Ga0207677_10071077 3300026023 Bacteria 2455
165 Ga0207639_10006469 3300026041 Bacteria 7969
166 Ga0207639_10011363 3300026041 Bacteria 6181
167 Ga0207639_10093253 3300026041 Bacteria 2414
168 Ga0207678_10035089 3300026067 Bacteria 4367
169 Ga0207708_10000662 3300026075 Bacteria 26417
170 Ga0207708_10041125 3300026075 Bacteria 3524
171 Ga0207702_10000201 3300026078 Bacteria 70471
172 Ga0207648_10000175 3300026089 Bacteria 66839
173 Ga0207648_10004215 3300026089 Bacteria 14859
174 Ga0207675_100003420 3300026118 Bacteria 15498
175 Ga0207675_100052392 3300026118 Bacteria 3808
176 Ga0207683_10019929 3300026121 Bacteria 5731
177 Ga0207683_10040389 3300026121 Unclassified 4071
178 Ga0207698_10004722 3300026142 Bacteria 8333
179 Ga0268266_10000018 3300028379 Bacteria 569141
180 Ga0268266_10020954 3300028379 Bacteria 5573
181 Ga0307517_10002197 3300028786 Bacteria 31568
182 Ga0307515_10001771 3300028794 Bacteria 48123
183 Ga0265338_10164469 3300028800 Bacteria 1710
184 Ga0307507_10000064 3300033179 Bacteria 161226
185 Ga0307510_10000328 3300033180 Bacteria 44214
186 Ga0373941_0007827 3300035115 Bacteria 2632
187 Ga0395899_0001077 3300037312 Bacteria 24592
188 Ga0395900_0000786 3300037418 Bacteria 41948
189 Ga0395900_0001393 3300037418 Bacteria 28920
190 Ga0395900_0008625 3300037418 Bacteria 10476
191 Ga0395900_0119346 3300037418 Bacteria 2707
192 Ga0395898_0002934 3300037466 Bacteria 19400
193 Ga0395898_0013831 3300037466 Bacteria 8295
194 Ga0395905_0002241 3300037471 Bacteria 21758
195 Ga0395901_0008879 3300038443 Bacteria 10175
196 Ga0395901_0049822 3300038443 Bacteria 4352
197 Ga0439448_0001740 3300042005 Bacteria 5754
198 Ga0466966_0017781 3300044684 Bacteria 4694
199 Ga0466963_0015121 3300044694 Bacteria 4772
200 Ga0466963_0026920 3300044694 Bacteria 3679
201 Ga0466963_0035994 3300044694 Bacteria 3226
202 Ga0466959_0034417 3300045049 Bacteria 3747
203 Ga0466958_0074609 3300045836 Bacteria 2079
204 Ga0466967_0025422 3300045976 Bacteria 4883
205 Ga0495650_0000003 3300046471 Bacteria 900730
206 Ga0495650_0000087 3300046471 Bacteria 234870
207 Ga0495650_0038323 3300046471 Bacteria 2078
208 Ga0495585_0000167 3300046492 Bacteria 70874
209 Ga0495585_0000411 3300046492 Bacteria 41565
210 Ga0495585_0008330 3300046492 Bacteria 6288
211 Ga0495583_0012887 3300046506 Bacteria 4699
212 Ga0495606_0000052 3300046507 Bacteria 201529
213 Ga0495606_0000116 3300046507 Bacteria 134901
214 Ga0495606_0022413 3300046507 Bacteria 4602
215 Ga0495606_0034130 3300046507 Bacteria 3496
216 Ga0495610_0004188 3300046512 Bacteria 10774
217 Ga0495610_0005252 3300046512 Bacteria 9264
218 Ga0495616_0003257 3300046513 Bacteria 10439
219 Ga0495616_0005075 3300046513 Bacteria 8187
220 Ga0495628_0149655 3300046516 Unclassified 1779
221 Ga0495631_0054530 3300046518 Bacteria 1743
222 Ga0495648_0002877 3300046524 Bacteria 15501
223 Ga0495648_0005217 3300046524 Bacteria 10870
224 Ga0495648_0052004 3300046524 Bacteria 2492
225 Ga0495654_0027375 3300046530 Bacteria 2924
226 Ga0495609_0022860 3300046538 Bacteria 2879
227 Ga0495645_0016704 3300046543 Bacteria 5249
228 Ga0495633_0000056 3300046558 Bacteria 149334
229 Ga0495633_0003248 3300046558 Bacteria 10953
230 Ga0495633_0006938 3300046558 Bacteria 6622
231 Ga0495668_0000021 3300046616 Bacteria 381308
232 Ga0495625_0000008 3300046660 Bacteria 536165
233 Ga0495625_0000159 3300046660 Bacteria 104355
234 Ga0495625_0001186 3300046660 Bacteria 33408
235 Ga0495625_0104425 3300046660 Bacteria 1942
236 Ga0495625_0202574 3300046660 Bacteria 1309
237 Ga0495661_0009673 3300046665 Bacteria 6604
238 Ga0495661_0011495 3300046665 Bacteria 6006
239 Ga0495649_0000003 3300046694 Bacteria 880817
240 Ga0495649_0000018 3300046694 Bacteria 220586
241 Ga0495589_0058868 3300046794 Bacteria 1889
242 Ga0495660_0010359 3300046810 Bacteria 5422
243 Ga0495687_001681 3300047443 Bacteria 19735
244 Ga0495687_002367 3300047443 Bacteria 15256
245 Ga0495686_0000160 3300047472 Bacteria 128437
246 Ga0495686_0000274 3300047472 Bacteria 91650
247 Ga0495686_0001122 3300047472 Bacteria 31676
248 Ga0495686_0001331 3300047472 Bacteria 27695
249 Ga0495686_0029785 3300047472 Bacteria 3549
250 Ga0495686_0101663 3300047472 Bacteria 1733
251 Ga0496100_0134877 3300048903 Bacteria 1743
252 Ga0496101_0103284 3300048904 Bacteria 2136
253 Ga0496104_0014827 3300048907 Bacteria 7043
254 Ga0496105_0152291 3300048908 Bacteria 1900
255 Ga0496106_0072874 3300048909 Unclassified 2627
256 Ga0496108_0277392 3300048911 Bacteria 1459
257 Ga0496109_0037817 3300048912 Unclassified 4362
258 Ga0496111_0075036 3300048914 Unclassified 2464
259 Ga0496114_0004448 3300048917 Bacteria 10876
260 Ga0496126_0002052 3300048929 Bacteria 28303
261 Ga0496126_0020346 3300048929 Bacteria 6511
262 nmdc:mga0k408_83025_c1 3300050493 Bacteria 1878
263 nmdc:mga08y16_55586_c1 3300050511 Bacteria 4135
264 Ga0500642_0005552 3300053130 Bacteria 4079
265 2599478624 2599185184 Bacteria 6430550
266 2919441322 2919437846 Bacteria 6199444
267 2928080318 2928078545 Bacteria 6534839
268 2928080657 2928078545 Bacteria 6534839
269 2928149507 2928147474 Bacteria 6512076
270 2928150881 2928147474 Bacteria 6512076
271 2932082958 2932082852 Bacteria 6563563
272 2932083338 2932082852 Bacteria 6563563
273 2977232686 2977232053 Bacteria 5485925
274 LJNas_1000944
275 JGI24737J22298_10000420
276 JGI24735J21928_10000002
277 JGI24735J21928_10000004
278 rootH1_10019650
279 rootH1_10034282
280 rootH2_10005719
281 rootH2_10007152
282 rootH2_10032514
283 rootH2_10034253
284 rootH2_10053112
285 rootL2_10155366
286 rootH1_10002666
287 rootH1_10149388
288 rootH1_10334830
289 rootH1_10335381
290 Ga0058863_10839860
291 Ga0070658_10000011
292 Ga0070676_10000277
293 Ga0068868_100005721
294 Ga0070689_100000031
295 Ga0070687_100001327
296 Ga0070661_100016656
297 Ga0070668_100011133
298 Ga0070675_100003530
299 Ga0070671_100007413
300 Ga0070671_100018311
301 Ga0070674_100050544
302 Ga0070673_100000276
303 Ga0070673_100003782
304 Ga0070688_100000612
305 Ga0070700_100000180
306 Ga0070700_100047622
307 Ga0070678_100002362
308 Ga0070662_100000032
309 Ga0070662_100001985
310 Ga0070681_10156497
311 Ga0068867_100000449
312 Ga0068867_100001414
313 Ga0070685_10000421
314 Ga0068853_100008727
315 Ga0068853_100089036
316 Ga0068853_100114996
317 Ga0070672_100000407
318 Ga0070686_100000517
319 Ga0070696_100016773
320 Ga0070665_100000003
321 Ga0070665_100031192
322 Ga0070665_100080009
323 Ga0068855_100000042
324 Ga0068855_100008730
325 Ga0068855_100010454
326 Ga0068855_100106954
327 Ga0068855_100143647
328 Ga0070664_100193730
329 Ga0068856_100000229
330 Ga0068856_100001512
331 Ga0068856_100111277
332 Ga0068856_100148356
333 Ga0068852_100002452
334 Ga0068859_100124116
335 Ga0068861_100003573
336 Ga0068858_100073710
337 Ga0068858_100215843
338 Ga0081538_10000847
339 Ga0075366_10092815
340 Ga0097621_100000165
341 Ga0097621_100021708
342 Ga0068871_100000018
343 Ga0068865_100000396
344 Ga0068865_100051935
345 Ga0097620_100124116
346 Ga0105240_10000237
347 Ga0105240_10022011
348 Ga0105240_10029393
349 Ga0105240_10135590
350 Ga0105240_10202317
351 Ga0111539_10071577
352 Ga0105245_10008356
353 Ga0105241_10000098
354 Ga0105241_10003076
355 Ga0105241_10012852
356 Ga0105242_10005497
357 Ga0105248_10001714
358 Ga0105248_10411869
359 Ga0105248_10423531
360 Ga0105237_10000224
361 Ga0105237_10000952
362 Ga0105237_10001604
363 Ga0105237_10003309
364 Ga0105237_10051168
365 Ga0105249_10003876
366 Ga0105239_10000002
367 Ga0105239_10000013
368 Ga0105239_10004436
369 Ga0105239_10012931
370 Ga0105239_10014078
371 Ga0105239_10055129
372 Ga0105239_10070079
373 Ga0157371_10018023
374 Ga0157371_10042282
375 Ga0157370_10064530
376 Ga0157369_10002502
377 Ga0157369_10028857
378 Ga0157374_10000348
379 Ga0157374_10159296
380 Ga0157374_10234893
381 Ga0157378_10000771
382 Ga0157378_10084996
383 Ga0163162_10000031
384 Ga0163162_10006339
385 Ga0163162_10009851
386 Ga0163162_10042726
387 Ga0163162_10127518
388 Ga0163162_10241209
389 Ga0157372_10000001
390 Ga0157372_10084127
391 Ga0157375_10008638
392 Ga0157375_10017987
393 Ga0163163_10162291
394 Ga0157376_10012004
395 Ga0157376_10064935
396 Ga0197907_10881124
397 Ga0209455_1004024
398 Ga0207680_10003247
399 Ga0207647_10000042
400 Ga0207647_10009325
401 Ga0207647_10081867
402 Ga0207645_10000650
403 Ga0207645_10105743
404 Ga0207705_10000015
405 Ga0207705_10112946
406 Ga0207654_10001029
407 Ga0207654_10026507
408 Ga0207695_10000013
409 Ga0207695_10005995
410 Ga0207695_10012058
411 Ga0207695_10098383
412 Ga0207671_10001649
413 Ga0207671_10002707
414 Ga0207671_10010431
415 Ga0207671_10010699
416 Ga0207657_10083783
417 Ga0207652_10192806
418 Ga0207694_10030177
419 Ga0207650_10029155
420 Ga0207644_10004079
421 Ga0207706_10000191
422 Ga0207706_10004949
423 Ga0207706_10066734
424 Ga0207670_10000040
425 Ga0207669_10001463
426 Ga0207704_10000053
427 Ga0207704_10060291
428 Ga0207691_10003763
429 Ga0207711_10005840
430 Ga0207667_10000037
431 Ga0207667_10023830
432 Ga0207667_10041354
433 Ga0207651_10000749
434 Ga0207712_10035719
435 Ga0207668_10009362
436 Ga0207677_10005788
437 Ga0207677_10071077
438 Ga0207639_10006469
439 Ga0207639_10011363
440 Ga0207639_10093253
441 Ga0207678_10035089
442 Ga0207708_10000662
443 Ga0207708_10041125
444 Ga0207702_10000201
445 Ga0207648_10000175
446 Ga0207648_10004215
447 Ga0207675_100003420
448 Ga0207675_100052392
449 Ga0207683_10019929
450 Ga0207683_10040389
451 Ga0207698_10004722
452 Ga0268266_10000018
453 Ga0268266_10020954
454 Ga0307517_10002197
455 Ga0307515_10001771
456 Ga0265338_10164469
457 Ga0307507_10000064
458 Ga0307510_10000328
459 Ga0373941_0007827
460 Ga0395899_0001077
461 Ga0395900_0000786
462 Ga0395900_0001393
463 Ga0395900_0008625
464 Ga0395900_0119346
465 Ga0395898_0002934
466 Ga0395898_0013831
467 Ga0395905_0002241
468 Ga0395901_0008879
469 Ga0395901_0049822
470 Ga0439448_0001740
471 Ga0466966_0017781
472 Ga0466963_0015121
473 Ga0466963_0026920
474 Ga0466963_0035994
475 Ga0466959_0034417
476 Ga0466958_0074609
477 Ga0466967_0025422
478 Ga0495650_0000003
479 Ga0495650_0000087
480 Ga0495650_0038323
481 Ga0495585_0000167
482 Ga0495585_0000411
483 Ga0495585_0008330
484 Ga0495583_0012887
485 Ga0495606_0000052
486 Ga0495606_0000116
487 Ga0495606_0022413
488 Ga0495606_0034130
489 Ga0495610_0004188
490 Ga0495610_0005252
491 Ga0495616_0003257
492 Ga0495616_0005075
493 Ga0495628_0149655
494 Ga0495631_0054530
495 Ga0495648_0002877
496 Ga0495648_0005217
497 Ga0495648_0052004
498 Ga0495654_0027375
499 Ga0495609_0022860
500 Ga0495645_0016704
501 Ga0495633_0000056
502 Ga0495633_0003248
503 Ga0495633_0006938
504 Ga0495668_0000021
505 Ga0495625_0000008
506 Ga0495625_0000159
507 Ga0495625_0001186
508 Ga0495625_0104425
509 Ga0495625_0202574
510 Ga0495661_0009673
511 Ga0495661_0011495
512 Ga0495649_0000003
513 Ga0495649_0000018
514 Ga0495589_0058868
515 Ga0495660_0010359
516 Ga0495687_001681
517 Ga0495687_002367
518 Ga0495686_0000160
519 Ga0495686_0000274
520 Ga0495686_0001122
521 Ga0495686_0001331
522 Ga0495686_0029785
523 Ga0495686_0101663
524 Ga0496100_0134877
525 Ga0496101_0103284
526 Ga0496104_0014827
527 Ga0496105_0152291
528 Ga0496106_0072874
529 Ga0496108_0277392
530 Ga0496109_0037817
531 Ga0496111_0075036
532 Ga0496114_0004448
533 Ga0496126_0002052
534 Ga0496126_0020346
535 nmdc:mga0k408_83025_c1
536 nmdc:mga08y16_55586_c1
537 Ga0500642_0005552
538 2599478624
539 2919441322
540 2928080318
541 2928080657
542 2928149507
543 2928150881
544 2932082958
545 2932083338
546 2977232686

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

16

337

0.95

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

170

256

0.92

PF22366

NDH2_C

NDH2 C-terminal domain

361

421

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kmp-assembly1.cif.gz_A the structure of g164e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.9159 15 409
5kmp-assembly1.cif.gz_A the structure of g164e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.9092 15 409
4nwz-assembly1.cif.gz_A structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.9046 15 413
5kmq-assembly2.cif.gz_C the structure of i379e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.9043 15 411
4nwz-assembly4.cif.gz_D-3 structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.9014 16 411
ID Description Score Start End Superfamily
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9386 12 424 3.50.50.100
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9211 12 424 3.50.50.100
5kmpB00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9161 15 409 3.50.50.100
af_P00393_5_413_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9137 16 405 3.50.50.100
af_Q55CD9_31_450_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9108 7 430 3.50.50.100
ID Description Score Start End GO Terms
AF-A0A534PGG8-F1-model_v4 FAD-binding protein 0.9832 15 96 GO:0003955
GO:0016020
GO:0019646
AF-A0A2S8LNT3-F1-model_v4 deleted 0.9813 12 94
AF-A0A537CW29-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9781 14 152 GO:0003955
GO:0019646
AF-A0A5Q4FMY7-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9759 12 123 GO:0003955
GO:0019646
AF-A0A820ZEU9-F1-model_v4 FAD/NAD(P)-binding domain-containing protein 0.9719 167 368 GO:0003955
GO:0019646

Map