F378403

General Info

Members Datasets Scaffolds Average Seq Length
272 188 544 365

Family's Representative Sequence

Representative Sequence 3300025916|Ga0207663_10015523|Ga0207663_100155232
Length 413
Sequence LLSETHVVTFSLFLYDESNHSVYSNPRSYLMSIAPPRAEHIGSFLRPVELLEARRQSSPSPERLCALEDAHIKRILARQKELGFEIFTDGETRRRNFMSDFTDAVEGFDLTESTPRAWTWASELERPAPVSGGAPGTAPEKAEASRVAGIVTAKLRQVRRLTGHELSFLLQHSPGAIKMTLPSATQFPAIAFKRGMTDRVYKDHSELLWAIVEIMKSEMAQLSREGVNYIQIDAPRYSYYIDPKWREWIRAEMRVEPSELLDESIRADNACLEAARKPGVTLGMHLCRGNNRSHWYAQGGYDAIAEKLFGSVNVDRFLLEYDDERSGTFAPLRFVPSGKTVVLGLISTKRPQLESGDELMRKIQQATHYVPLERLALSPQCGFASTMEGNLLTEDEQWAKMRLVVETAHRVWG

Samples

Sample ID Description Type Environment
1 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
85 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
96 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
130 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
131 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
132 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
182 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
188 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.47
Nodule 0
Rhizoplane 2.94
Rhizosphere 93.01
Stem 0
Stem Tuber 0
Unclassified 9.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207663_10015523 3300025916 Unclassified 4204
2 Ga0065704_10174115 3300005289 Bacteria 1274
3 Ga0065715_10005558 3300005293 Bacteria 3141
4 Ga0070658_10083244 3300005327 Bacteria 2630
5 Ga0070658_10198057 3300005327 Bacteria 1694
6 Ga0070683_100056274 3300005329 Bacteria 3652
7 Ga0070666_10017346 3300005335 Bacteria 4615
8 Ga0070689_100203501 3300005340 Viruses 1617
9 Ga0070675_100040344 3300005354 Bacteria 3810
10 Ga0070671_100045629 3300005355 Bacteria 3644
11 Ga0070673_100036820 3300005364 Bacteria 3724
12 Ga0070659_100109402 3300005366 Unclassified 2230
13 Ga0070709_10020300 3300005434 Bacteria 3853
14 Ga0070713_100071077 3300005436 Bacteria 2940
15 Ga0070713_100080743 3300005436 Bacteria 2773
16 Ga0070713_100145984 3300005436 Bacteria 2100
17 Ga0070711_100016923 3300005439 Unclassified 4636
18 Ga0070705_100036527 3300005440 Bacteria 2763
19 Ga0070681_10077474 3300005458 Bacteria 3282
20 Ga0068867_100038619 3300005459 Bacteria 3476
21 Ga0070707_100041062 3300005468 Bacteria 4427
22 Ga0070698_100307105 3300005471 Bacteria 1517
23 Ga0070699_100153795 3300005518 Bacteria 2035
24 Ga0070684_100122435 3300005535 Bacteria 2340
25 Ga0070704_100344509 3300005549 Bacteria 1256
26 Ga0068857_100336860 3300005577 Bacteria 1395
27 Ga0068856_100174447 3300005614 Bacteria 2162
28 Ga0070702_100144160 3300005615 Bacteria 1521
29 Ga0068852_100105899 3300005616 Unclassified 2548
30 Ga0068861_100001614 3300005719 Bacteria 14371
31 Ga0068860_100298162 3300005843 Unclassified 1578
32 Ga0068860_100369122 3300005843 Bacteria 1415
33 Ga0081455_10019091 3300005937 Bacteria 6498
34 Ga0070717_10000794 3300006028 Bacteria 20755
35 Ga0070717_10018380 3300006028 Bacteria 5456
36 Ga0070717_10210863 3300006028 Bacteria 1704
37 Ga0070716_100011195 3300006173 Bacteria 4515
38 Ga0070712_100109919 3300006175 Bacteria 2055
39 Ga0070712_100186255 3300006175 Unclassified 1621
40 Ga0097621_100137112 3300006237 Bacteria 2088
41 Ga0068871_100017850 3300006358 Bacteria 5380
42 Ga0075430_100005517 3300006846 Bacteria 10689
43 Ga0075430_100279195 3300006846 Bacteria 1382
44 Ga0075434_100130081 3300006871 Bacteria 2536
45 Ga0075429_100069301 3300006880 Unclassified 3071
46 Ga0075435_100060417 3300007076 Unclassified 3073
47 Ga0099794_10049559 3300007265 Bacteria 2018
48 Ga0105240_10284892 3300009093 Bacteria 1897
49 Ga0105245_10001562 3300009098 Bacteria 20775
50 Ga0105245_10093310 3300009098 Bacteria 2773
51 Ga0114129_10074768 3300009147 Unclassified 4719
52 Ga0114129_10099629 3300009147 Plasmid 4022
53 Ga0114129_10352354 3300009147 Bacteria 1950
54 Ga0105241_10026370 3300009174 Bacteria 4323
55 Ga0105241_10352300 3300009174 Viruses 1278
56 Ga0105242_10120160 3300009176 Bacteria 2253
57 Ga0105237_10164183 3300009545 Unclassified 2219
58 Ga0105237_10251898 3300009545 Unclassified 1768
59 Ga0105238_10142502 3300009551 Bacteria 2373
60 Ga0105238_10157386 3300009551 Bacteria 2247
61 Ga0105249_10062162 3300009553 Bacteria 3428
62 Ga0105249_10132332 3300009553 Bacteria 2382
63 Ga0105239_10202259 3300010375 Bacteria 2225
64 Ga0157369_10102469 3300013105 Bacteria 3050
65 Ga0157374_10017402 3300013296 Bacteria 6327
66 Ga0157372_10193244 3300013307 Bacteria 2357
67 Ga0157375_10067545 3300013308 Bacteria 3572
68 Ga0163163_10043636 3300014325 Bacteria 4397
69 Ga0157380_10147687 3300014326 Bacteria 2028
70 Ga0157376_10177353 3300014969 Bacteria 1945
71 Ga0213876_10065007 3300021384 Bacteria 1925
72 Ga0213871_10024209 3300021441 Bacteria 1535
73 Ga0207647_10071629 3300025904 Bacteria 2091
74 Ga0207699_10012390 3300025906 Bacteria 4338
75 Ga0207695_10188374 3300025913 Unclassified 1981
76 Ga0207693_10186680 3300025915 Unclassified 1632
77 Ga0207652_10241955 3300025921 Bacteria 1627
78 Ga0207646_10061518 3300025922 Bacteria 3351
79 Ga0207694_10234180 3300025924 Bacteria 1500
80 Ga0207687_10003855 3300025927 Bacteria 10065
81 Ga0207687_10029571 3300025927 Bacteria 3687
82 Ga0207700_10003553 3300025928 Bacteria 9083
83 Ga0207700_10200097 3300025928 Bacteria 1683
84 Ga0207664_10078648 3300025929 Bacteria 2675
85 Ga0207706_10000968 3300025933 Bacteria 29344
86 Ga0207686_10121540 3300025934 Bacteria 1778
87 Ga0207704_10237198 3300025938 Bacteria 1360
88 Ga0207665_10004576 3300025939 Bacteria 9181
89 Ga0207691_10128779 3300025940 Bacteria 2237
90 Ga0207661_10203716 3300025944 Bacteria 1741
91 Ga0207668_10362097 3300025972 Bacteria 1216
92 Ga0207648_10051808 3300026089 Bacteria 3587
93 Ga0207648_10300447 3300026089 Unclassified 1439
94 Ga0207674_10110305 3300026116 Bacteria 2727
95 Ga0207675_100002150 3300026118 Bacteria 19579
96 Ga0209971_1028493 3300027682 Bacteria 1336
97 Ga0268264_10242380 3300028381 Unclassified 1670
98 Ga0265318_10007510 3300028577 Bacteria 4923
99 Ga0265338_10005290 3300028800 Bacteria 16896
100 Ga0265338_10051674 3300028800 Bacteria 3697
101 Ga0265328_10004320 3300031239 Bacteria 6181
102 Ga0265320_10041180 3300031240 Bacteria 2298
103 Ga0265340_10012244 3300031247 Bacteria 4532
104 Ga0265339_10000582 3300031249 Bacteria 28512
105 Ga0265316_10037174 3300031344 Bacteria 3932
106 Ga0265314_10009246 3300031711 Bacteria 8348
107 Ga0265342_10016100 3300031712 Bacteria 4895
108 Ga0307405_10014765 3300031731 Bacteria 4210
109 Ga0307407_10029740 3300031903 Bacteria 2939
110 Ga0307409_100215519 3300031995 Bacteria 1729
111 Ga0307411_10202056 3300032005 Bacteria 1527
112 Ga0373926_0000375 3300035083 Bacteria 11437
113 Ga0373923_0010334 3300035111 Bacteria 3393
114 Ga0373945_0010870 3300035116 Bacteria 3001
115 Ga0373956_0039281 3300035119 Bacteria 2097
116 Ga0373943_0001975 3300035170 Bacteria 9277
117 Ga0373924_0034823 3300035410 Unclassified 2040
118 Ga0373935_0002275 3300035692 Bacteria 10932
119 Ga0373927_0001581 3300035695 Bacteria 17077
120 Ga0373927_0018627 3300035695 Unclassified 4559
121 Ga0373933_0002707 3300035724 Bacteria 9919
122 Ga0373933_0086502 3300035724 Bacteria 1929
123 Ga0373947_0006035 3300035725 Bacteria 7063
124 Ga0373947_0041966 3300035725 Unclassified 2730
125 Ga0373937_0000238 3300036401 Bacteria 53880
126 Ga0373937_0001238 3300036401 Bacteria 21474
127 Ga0373937_0120477 3300036401 Bacteria 2445
128 Ga0373937_0222133 3300036401 Unclassified 1778
129 Ga0395899_0312334 3300037312 Bacteria 1061
130 Ga0395900_0313344 3300037418 Bacteria 1552
131 Ga0395898_0343097 3300037466 Bacteria 1424
132 Ga0436364_1275356 3300037853 Bacteria 3303
133 Ga0395901_0092647 3300038443 Unclassified 3163
134 Ga0436365_0168405 3300039437 Bacteria 4770
135 Ga0436365_1239458 3300039437 Unclassified 1751
136 Ga0436365_1866458 3300039437 Bacteria 2009
137 Ga0436360_0519602 3300039438 Bacteria 5790
138 Ga0436361_0628419 3300039447 Bacteria 3067
139 Ga0453683_0040076 3300044673 Bacteria 2942
140 Ga0466965_0154706 3300044683 Bacteria 1200
141 Ga0466963_0230301 3300044694 Bacteria 1298
142 Ga0466967_0346621 3300045976 Bacteria 1437
143 Ga0495629_0120137 3300046459 Bacteria 1831
144 Ga0495651_0000369 3300046462 Bacteria 34680
145 Ga0495653_0011229 3300046463 Bacteria 7319
146 Ga0495582_0005474 3300046473 Bacteria 7076
147 Ga0495628_0000081 3300046516 Bacteria 74176
148 Ga0495630_0030462 3300046517 Bacteria 4014
149 Ga0495630_0190343 3300046517 Bacteria 1565
150 Ga0495652_0000959 3300046529 Bacteria 33098
151 Ga0495587_0001923 3300046536 Bacteria 13836
152 Ga0495587_0048441 3300046536 Bacteria 2517
153 Ga0495645_0140955 3300046543 Bacteria 1682
154 Ga0495667_0035957 3300046559 Bacteria 3308
155 Ga0495634_0129626 3300046642 Bacteria 1609
156 Ga0495635_0214818 3300046663 Bacteria 1302
157 Ga0495599_0023088 3300046678 Bacteria 3887
158 Ga0495613_0060380 3300046689 Bacteria 2777
159 Ga0495613_0158506 3300046689 Bacteria 1611
160 Ga0495600_0054816 3300046809 Bacteria 2604
161 Ga0495581_0038109 3300047315 Bacteria 2782
162 Ga0495604_0001172 3300047317 Bacteria 21662
163 Ga0495680_0007726 3300047322 Bacteria 9822
164 Ga0495675_0000038 3300047444 Bacteria 91107
165 Ga0495675_0001554 3300047444 Bacteria 13851
166 Ga0495684_0049881 3300047471 Bacteria 3198
167 Ga0495602_0011610 3300048088 Bacteria 9100
168 Ga0496100_0227912 3300048903 Bacteria 1370
169 Ga0496102_0028783 3300048905 Unclassified 4967
170 Ga0496102_0529341 3300048905 Bacteria 1101
171 Ga0496103_0083915 3300048906 Bacteria 2006
172 Ga0496104_0222165 3300048907 Bacteria 1801
173 Ga0496111_0105383 3300048914 Bacteria 2075
174 Ga0496112_0424944 3300048915 Bacteria 1267
175 Ga0496114_0109324 3300048917 Bacteria 2367
176 Ga0501032_0068393 3300049569 Bacteria 2371
177 Ga0501033_0002765 3300049570 Bacteria 14710
178 Ga0501033_0018044 3300049570 Bacteria 5330
179 Ga0501036_0001016 3300049572 Bacteria 21192
180 Ga0501036_0006866 3300049572 Bacteria 9252
181 Ga0501037_0015624 3300049573 Bacteria 5588
182 Ga0501037_0111230 3300049573 Unclassified 1973
183 Ga0501038_0020546 3300049574 Bacteria 5934
184 Ga0501039_0001490 3300049575 Bacteria 17223
185 Ga0501039_0003999 3300049575 Bacteria 11081
186 Ga0501040_0000493 3300049576 Bacteria 23576
187 Ga0501040_0000937 3300049576 Bacteria 18359
188 Ga0501040_0068536 3300049576 Bacteria 2447
189 Ga0501041_0001710 3300049577 Bacteria 12303
190 Ga0501042_0000342 3300049578 Bacteria 23330
191 Ga0501042_0001138 3300049578 Bacteria 15340
192 Ga0501042_0168955 3300049578 Bacteria 1578
193 Ga0501043_0006034 3300049579 Bacteria 9736
194 Ga0501043_0028229 3300049579 Bacteria 4405
195 Ga0501046_0009794 3300049580 Bacteria 8264
196 Ga0501046_0010969 3300049580 Bacteria 7769
197 Ga0501047_0014288 3300049581 Bacteria 7550
198 Ga0501047_0174185 3300049581 Bacteria 2020
199 Ga0501048_0002810 3300049582 Bacteria 13289
200 Ga0501068_0011986 3300049584 Bacteria 4903
201 Ga0501070_0115143 3300049586 Bacteria 2221
202 Ga0501070_0155316 3300049586 Bacteria 1887
203 Ga0501071_0002445 3300049587 Bacteria 11271
204 Ga0501071_0002615 3300049587 Bacteria 11003
205 Ga0501072_0012130 3300049588 Bacteria 6584
206 Ga0501072_0013831 3300049588 Bacteria 6181
207 Ga0501072_0220879 3300049588 Bacteria 1510
208 Ga0501074_0031361 3300049590 Bacteria 3851
209 Ga0501075_0002548 3300049591 Bacteria 12135
210 Ga0501075_0003851 3300049591 Bacteria 10102
211 Ga0501075_0048821 3300049591 Bacteria 3180
212 Ga0501076_0003472 3300049592 Bacteria 11070
213 Ga0501076_0004889 3300049592 Bacteria 9581
214 Ga0501076_0005719 3300049592 Bacteria 8966
215 Ga0501076_0106481 3300049592 Bacteria 2264
216 Ga0501077_0000948 3300049593 Bacteria 17474
217 Ga0501077_0002365 3300049593 Bacteria 11343
218 Ga0501077_0003490 3300049593 Bacteria 9439
219 Ga0501077_0020750 3300049593 Bacteria 4159
220 Ga0501079_0001709 3300049741 Bacteria 15655
221 Ga0501079_0002040 3300049741 Bacteria 14464
222 Ga0501079_0011516 3300049741 Bacteria 6751
223 Ga0501079_0235280 3300049741 Bacteria 1431
224 Ga0501079_0274545 3300049741 Bacteria 1318
225 Ga0501080_0004280 3300049742 Bacteria 12671
226 Ga0501080_0054992 3300049742 Bacteria 3707
227 Ga0501080_0131110 3300049742 Bacteria 2321
228 Ga0501081_0005098 3300049743 Bacteria 8454
229 Ga0501081_0009164 3300049743 Bacteria 6443
230 Ga0501081_0022204 3300049743 Bacteria 4244
231 Ga0501083_0070066 3300049744 Bacteria 2333
232 Ga0501083_0102057 3300049744 Bacteria 1891
233 Ga0501035_0011330 3300049822 Bacteria 8264
234 Ga0501035_0015685 3300049822 Bacteria 6994
235 Ga0501044_0096728 3300049823 Bacteria 2974
236 Ga0501044_0115581 3300049823 Bacteria 2689
237 Ga0501045_0002834 3300049824 Bacteria 11838
238 Ga0501045_0014277 3300049824 Bacteria 5628
239 nmdc:mga05p37_13349_c1 3300050507 Bacteria 9840
240 nmdc:mga05p37_174041_c1 3300050507 Unclassified 2624
241 nmdc:mga05p37_344311_c1 3300050507 Bacteria 1757
242 nmdc:mga0qj67_114647_c1 3300050509 Bacteria 2177
243 nmdc:mga0qj67_271289_c1 3300050509 Bacteria 1376
244 nmdc:mga06r32_321213_c1 3300050510 Bacteria 1534
245 nmdc:mga06r32_60221_c1 3300050510 Unclassified 3653
246 nmdc:mga0n895_140038_c1 3300050512 Bacteria 2447
247 nmdc:mga0n895_380229_c1 3300050512 Bacteria 1429
248 nmdc:mga0n895_556703_c1 3300050512 Bacteria 1152
249 nmdc:mga0rr50_247482_c1 3300050513 Bacteria 1479
250 nmdc:mga0rr50_93472_c1 3300050513 Bacteria 2346
251 nmdc:mga08x19_38996_c1 3300050514 Bacteria 3019
252 nmdc:mga0a205_123349_c1 3300050515 Unclassified 2490
253 nmdc:mga0a205_223013_c1 3300050515 Bacteria 1770
254 Ga0495601_0005440 3300053077 Bacteria 7418
255 Ga0495619_0010057 3300053085 Bacteria 5954
256 Ga0495619_0212760 3300053085 Bacteria 1339
257 Ga0500556_0000384 3300053104 Bacteria 32324
258 Ga0500642_0090382 3300053130 Bacteria 1415
259 Ga0500616_0000019 3300053153 Bacteria 549964
260 Ga0500616_0005385 3300053153 Bacteria 8699
261 Ga0501084_0001818 3300054114 Bacteria 17029
262 Ga0501084_0005725 3300054114 Bacteria 10214
263 Ga0501084_0113617 3300054114 Bacteria 2276
264 Ga0501082_0001746 3300060353 Bacteria 19152
265 Ga0501082_0006867 3300060353 Bacteria 9844
266 Ga0501082_0063002 3300060353 Bacteria 3193
267 Ga0530510_0000089 3300061734 Bacteria 48705
268 Ga0530510_0003709 3300061734 Bacteria 10511
269 Ga0530510_0019781 3300061734 Bacteria 4783
270 Ga0530510_0054939 3300061734 Bacteria 2877
271 2558909932 2558860112 Bacteria 9931328
272 8055066050 8055066027 Bacteria 9479577
273 Ga0207663_10015523
274 Ga0065704_10174115
275 Ga0065715_10005558
276 Ga0070658_10083244
277 Ga0070658_10198057
278 Ga0070683_100056274
279 Ga0070666_10017346
280 Ga0070689_100203501
281 Ga0070675_100040344
282 Ga0070671_100045629
283 Ga0070673_100036820
284 Ga0070659_100109402
285 Ga0070709_10020300
286 Ga0070713_100071077
287 Ga0070713_100080743
288 Ga0070713_100145984
289 Ga0070711_100016923
290 Ga0070705_100036527
291 Ga0070681_10077474
292 Ga0068867_100038619
293 Ga0070707_100041062
294 Ga0070698_100307105
295 Ga0070699_100153795
296 Ga0070684_100122435
297 Ga0070704_100344509
298 Ga0068857_100336860
299 Ga0068856_100174447
300 Ga0070702_100144160
301 Ga0068852_100105899
302 Ga0068861_100001614
303 Ga0068860_100298162
304 Ga0068860_100369122
305 Ga0081455_10019091
306 Ga0070717_10000794
307 Ga0070717_10018380
308 Ga0070717_10210863
309 Ga0070716_100011195
310 Ga0070712_100109919
311 Ga0070712_100186255
312 Ga0097621_100137112
313 Ga0068871_100017850
314 Ga0075430_100005517
315 Ga0075430_100279195
316 Ga0075434_100130081
317 Ga0075429_100069301
318 Ga0075435_100060417
319 Ga0099794_10049559
320 Ga0105240_10284892
321 Ga0105245_10001562
322 Ga0105245_10093310
323 Ga0114129_10074768
324 Ga0114129_10099629
325 Ga0114129_10352354
326 Ga0105241_10026370
327 Ga0105241_10352300
328 Ga0105242_10120160
329 Ga0105237_10164183
330 Ga0105237_10251898
331 Ga0105238_10142502
332 Ga0105238_10157386
333 Ga0105249_10062162
334 Ga0105249_10132332
335 Ga0105239_10202259
336 Ga0157369_10102469
337 Ga0157374_10017402
338 Ga0157372_10193244
339 Ga0157375_10067545
340 Ga0163163_10043636
341 Ga0157380_10147687
342 Ga0157376_10177353
343 Ga0213876_10065007
344 Ga0213871_10024209
345 Ga0207647_10071629
346 Ga0207699_10012390
347 Ga0207695_10188374
348 Ga0207693_10186680
349 Ga0207652_10241955
350 Ga0207646_10061518
351 Ga0207694_10234180
352 Ga0207687_10003855
353 Ga0207687_10029571
354 Ga0207700_10003553
355 Ga0207700_10200097
356 Ga0207664_10078648
357 Ga0207706_10000968
358 Ga0207686_10121540
359 Ga0207704_10237198
360 Ga0207665_10004576
361 Ga0207691_10128779
362 Ga0207661_10203716
363 Ga0207668_10362097
364 Ga0207648_10051808
365 Ga0207648_10300447
366 Ga0207674_10110305
367 Ga0207675_100002150
368 Ga0209971_1028493
369 Ga0268264_10242380
370 Ga0265318_10007510
371 Ga0265338_10005290
372 Ga0265338_10051674
373 Ga0265328_10004320
374 Ga0265320_10041180
375 Ga0265340_10012244
376 Ga0265339_10000582
377 Ga0265316_10037174
378 Ga0265314_10009246
379 Ga0265342_10016100
380 Ga0307405_10014765
381 Ga0307407_10029740
382 Ga0307409_100215519
383 Ga0307411_10202056
384 Ga0373926_0000375
385 Ga0373923_0010334
386 Ga0373945_0010870
387 Ga0373956_0039281
388 Ga0373943_0001975
389 Ga0373924_0034823
390 Ga0373935_0002275
391 Ga0373927_0001581
392 Ga0373927_0018627
393 Ga0373933_0002707
394 Ga0373933_0086502
395 Ga0373947_0006035
396 Ga0373947_0041966
397 Ga0373937_0000238
398 Ga0373937_0001238
399 Ga0373937_0120477
400 Ga0373937_0222133
401 Ga0395899_0312334
402 Ga0395900_0313344
403 Ga0395898_0343097
404 Ga0436364_1275356
405 Ga0395901_0092647
406 Ga0436365_0168405
407 Ga0436365_1239458
408 Ga0436365_1866458
409 Ga0436360_0519602
410 Ga0436361_0628419
411 Ga0453683_0040076
412 Ga0466965_0154706
413 Ga0466963_0230301
414 Ga0466967_0346621
415 Ga0495629_0120137
416 Ga0495651_0000369
417 Ga0495653_0011229
418 Ga0495582_0005474
419 Ga0495628_0000081
420 Ga0495630_0030462
421 Ga0495630_0190343
422 Ga0495652_0000959
423 Ga0495587_0001923
424 Ga0495587_0048441
425 Ga0495645_0140955
426 Ga0495667_0035957
427 Ga0495634_0129626
428 Ga0495635_0214818
429 Ga0495599_0023088
430 Ga0495613_0060380
431 Ga0495613_0158506
432 Ga0495600_0054816
433 Ga0495581_0038109
434 Ga0495604_0001172
435 Ga0495680_0007726
436 Ga0495675_0000038
437 Ga0495675_0001554
438 Ga0495684_0049881
439 Ga0495602_0011610
440 Ga0496100_0227912
441 Ga0496102_0028783
442 Ga0496102_0529341
443 Ga0496103_0083915
444 Ga0496104_0222165
445 Ga0496111_0105383
446 Ga0496112_0424944
447 Ga0496114_0109324
448 Ga0501032_0068393
449 Ga0501033_0002765
450 Ga0501033_0018044
451 Ga0501036_0001016
452 Ga0501036_0006866
453 Ga0501037_0015624
454 Ga0501037_0111230
455 Ga0501038_0020546
456 Ga0501039_0001490
457 Ga0501039_0003999
458 Ga0501040_0000493
459 Ga0501040_0000937
460 Ga0501040_0068536
461 Ga0501041_0001710
462 Ga0501042_0000342
463 Ga0501042_0001138
464 Ga0501042_0168955
465 Ga0501043_0006034
466 Ga0501043_0028229
467 Ga0501046_0009794
468 Ga0501046_0010969
469 Ga0501047_0014288
470 Ga0501047_0174185
471 Ga0501048_0002810
472 Ga0501068_0011986
473 Ga0501070_0115143
474 Ga0501070_0155316
475 Ga0501071_0002445
476 Ga0501071_0002615
477 Ga0501072_0012130
478 Ga0501072_0013831
479 Ga0501072_0220879
480 Ga0501074_0031361
481 Ga0501075_0002548
482 Ga0501075_0003851
483 Ga0501075_0048821
484 Ga0501076_0003472
485 Ga0501076_0004889
486 Ga0501076_0005719
487 Ga0501076_0106481
488 Ga0501077_0000948
489 Ga0501077_0002365
490 Ga0501077_0003490
491 Ga0501077_0020750
492 Ga0501079_0001709
493 Ga0501079_0002040
494 Ga0501079_0011516
495 Ga0501079_0235280
496 Ga0501079_0274545
497 Ga0501080_0004280
498 Ga0501080_0054992
499 Ga0501080_0131110
500 Ga0501081_0005098
501 Ga0501081_0009164
502 Ga0501081_0022204
503 Ga0501083_0070066
504 Ga0501083_0102057
505 Ga0501035_0011330
506 Ga0501035_0015685
507 Ga0501044_0096728
508 Ga0501044_0115581
509 Ga0501045_0002834
510 Ga0501045_0014277
511 nmdc:mga05p37_13349_c1
512 nmdc:mga05p37_174041_c1
513 nmdc:mga05p37_344311_c1
514 nmdc:mga0qj67_114647_c1
515 nmdc:mga0qj67_271289_c1
516 nmdc:mga06r32_321213_c1
517 nmdc:mga06r32_60221_c1
518 nmdc:mga0n895_140038_c1
519 nmdc:mga0n895_380229_c1
520 nmdc:mga0n895_556703_c1
521 nmdc:mga0rr50_247482_c1
522 nmdc:mga0rr50_93472_c1
523 nmdc:mga08x19_38996_c1
524 nmdc:mga0a205_123349_c1
525 nmdc:mga0a205_223013_c1
526 Ga0495601_0005440
527 Ga0495619_0010057
528 Ga0495619_0212760
529 Ga0500556_0000384
530 Ga0500642_0090382
531 Ga0500616_0000019
532 Ga0500616_0005385
533 Ga0501084_0001818
534 Ga0501084_0005725
535 Ga0501084_0113617
536 Ga0501082_0001746
537 Ga0501082_0006867
538 Ga0501082_0063002
539 Ga0530510_0000089
540 Ga0530510_0003709
541 Ga0530510_0019781
542 Ga0530510_0054939
543 2558909932
544 8055066050

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

38

173

0.82

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

192

410

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bq5-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8648 2 364
3bq5-assembly1.cif.gz_A crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8626 2 364
1t7l-assembly1.cif.gz_A crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8596 7 364
4l6h-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with methotrexate and homocysteine 0.8595 9 364
1xpg-assembly1.cif.gz_A crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and methyltetrahydrofolate 0.8579 9 364
ID Description Score Start End Superfamily
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.873 9 364 3.20.20.210
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8616 9 365 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8435 9 364 3.20.20.210
1ypxA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8384 1 367 3.20.20.210
1xdjA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8373 2 365 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A537J1H2-F1-model_v4 Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein 0.988 116 366 GO:0003871
GO:0008270
GO:0009086
AF-A0A6G1V381-F1-model_v4 deleted 0.9774 219 367
AF-A0A537J1H2-F1-model_v4 Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein 0.9764 116 366 GO:0003871
GO:0008270
GO:0009086
AF-A0A352UJX3-F1-model_v4 Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein 0.9756 104 202
AF-A0A3B8SG15-F1-model_v4 deleted 0.9736 271 366

Map