F378265

General Info

Members Datasets Scaffolds Average Seq Length
272 230 168 305

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10042080|Ga0075364_100420803
Length 294
Sequence MTVLAKDERGRAGHRSAPDQLAGLLFITPQLIGTVVFVLVPLALVVWYSLHEWNVLADTFEFVGTENYRALVDDPALPGVLRVTGLFSIGLVVLNLGLALLLAVLLNQKLRGTIVFRTLFFSPVVVSLVAWTIVWGFLLQDNGGVNPNWLRGDWTALLSVVVVQVVKNVGLNMVLFLAALQGVPAELYEAARVEGASRWTQFRRITVPLISPTILLTSIITVVGSLQVFAQIAVLTQGGPGTSTTVLVYYLYQRAFQFHQFGYGATLSVLLFAIVLVLTIVQWRMRRRWVFHEQ

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
3 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
4 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
5 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
6 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
7 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
8 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
9 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
10 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
11 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
12 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
13 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
14 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
15 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
16 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
17 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
18 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
19 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
20 2643221580 Devosia sp. Root635 Isolate Unclassified
21 2643221582 Rhizobium sp. Root651 Isolate Unclassified
22 2643221591 Devosia sp. Root685 Isolate Unclassified
23 2643221629 Devosia sp. Root105 Isolate Unclassified
24 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
25 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
26 2643221662 Devosia sp. Root413D1 Isolate Unclassified
27 2643221674 Devosia sp. Root436 Isolate Unclassified
28 2643221693 Rhizobium sp. Root491 Isolate Unclassified
29 2738543013 Variovorax sp. BT01 Isolate Unclassified
30 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
31 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
32 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
33 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
34 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
35 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
36 2808606394 Promicromonospora sp. C35 Isolate Unclassified
37 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
38 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
39 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
40 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
41 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
42 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
43 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
44 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
45 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
46 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
47 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
48 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
49 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
50 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
51 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
52 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
53 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
54 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
55 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
56 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
57 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
58 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
59 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
60 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
61 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
62 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
63 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
64 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
65 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
66 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
67 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
68 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
69 2858868258 Micromonospora sp. MH33 Isolate Unclassified
70 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
71 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
72 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
73 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
74 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
75 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
76 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
77 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
78 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
79 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
80 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
81 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
82 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
83 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
84 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
85 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
86 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
87 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
88 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
89 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
90 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
91 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
92 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
93 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
94 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
95 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
96 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
97 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
98 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
99 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
100 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
101 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
102 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
103 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
104 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
105 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
106 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
107 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
108 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
109 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
110 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
111 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
112 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
113 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
114 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
115 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
116 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
117 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
118 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
119 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
120 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
121 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
122 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
123 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
124 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
125 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
126 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
127 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
128 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
129 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
130 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
131 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
132 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
133 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
134 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
135 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
136 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
137 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
138 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
139 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
140 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
141 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
142 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
144 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
145 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
146 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
147 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
148 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
149 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
150 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
156 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
157 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
158 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
160 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
161 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
162 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
163 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
164 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
165 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
166 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
167 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
168 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
169 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
170 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
171 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
172 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
173 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
174 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
175 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
176 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
177 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
178 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
179 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
180 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
181 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
182 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
183 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
184 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
185 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
186 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
187 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
188 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
189 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
190 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
191 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
192 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
195 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
196 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
206 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
207 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
208 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
209 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
210 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
211 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
212 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
213 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
214 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
215 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
216 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
217 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
218 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
219 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
220 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
221 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
222 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
223 649633069 Micromonospora sp. L5 Isolate Unclassified
224 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
225 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
226 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
227 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
228 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
229 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
230 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.76
Metatranscriptomes 0
Isolates 38.24

Biome Distribution

Category Percentage (%)
Aerial Root 1.47
Bulb 0
Endosphere 25.37
Nodule 12.13
Rhizoplane 4.41
Rhizosphere 29.04
Stem 0
Stem Tuber 0
Unclassified 27.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10014922 3300001979 Bacteria 2851
2 JGI24739J22299_10017539 3300001989 Bacteria 2581
3 JGI24737J22298_10003884 3300001990 Bacteria 5253
4 JGI25158J39367_1000537 3300002739 Bacteria 7648
5 JGI25152J39213_1002537 3300002773 Bacteria 6881
6 JGI25152J39213_1006946 3300002773 Bacteria 2990
7 JGI25150J39212_1003730 3300002774 Bacteria 3515
8 JGI25159J45721_1016308 3300002987 Bacteria 1589
9 JGI25151J46595_10000722 3300003187 Bacteria 27466
10 JGI25153J46596_10004825 3300003215 Bacteria 7183
11 JGI25153J46596_10029145 3300003215 Bacteria 1900
12 rootH1_10138977 3300003316 Bacteria 2253
13 rootH2_10004052 3300003320 Bacteria 3759
14 rootL2_10026687 3300003322 Bacteria 2688
15 JGI25160J50197_1013106 3300003354 Bacteria 2842
16 JGI25161J50226_1000119 3300003374 Bacteria 58009
17 Ga0055526_1006985 3300003771 Bacteria 5989
18 Ga0055524_1005157 3300003775 Bacteria 5892
19 Ga0055536_1003653 3300003781 Bacteria 8193
20 Ga0055536_1010978 3300003781 Bacteria 3527
21 Ga0055534_1000774 3300003784 Bacteria 15042
22 Ga0055530_10013041 3300003791 Bacteria 2858
23 Ga0055540_1005433 3300003792 Bacteria 5354
24 Ga0055540_1011430 3300003792 Bacteria 2862
25 Ga0055531_10002995 3300003794 Bacteria 10969
26 Ga0055543_1000616 3300004625 Bacteria 19205
27 Ga0065165_1021483 3300005262 Bacteria 2241
28 Ga0070669_100262742 3300005353 Bacteria 1378
29 Ga0070667_100096232 3300005367 Bacteria 2553
30 Ga0068853_100030606 3300005539 Bacteria 4548
31 Ga0070665_100117344 3300005548 Bacteria 2664
32 Ga0075364_10000332 3300006051 Bacteria 23468
33 Ga0075364_10042080 3300006051 Bacteria 2968
34 Ga0075362_10061200 3300006177 Bacteria 1703
35 Ga0075369_10011489 3300006186 Bacteria 3485
36 Ga0075366_10020969 3300006195 Bacteria 3797
37 Ga0075370_10083870 3300006353 Bacteria 1834
38 Ga0079104_1000360 3300006946 Bacteria 54768
39 Ga0099826_10025188 3300006948 Bacteria 4413
40 Ga0157373_10016615 3300013100 Bacteria 5366
41 Ga0157371_10000005 3300013102 Bacteria 416456
42 Ga0157370_10000437 3300013104 Bacteria 52016
43 Ga0157369_10277652 3300013105 Bacteria 1745
44 Ga0163162_10043914 3300013306 Bacteria 4475
45 Ga0182008_10004563 3300014497 Bacteria 8067
46 Ga0182007_10002265 3300015262 Bacteria 9701
47 Ga0209436_100017 3300025208 Bacteria 116238
48 Ga0207425_1000475 3300025245 Bacteria 25473
49 Ga0207425_1031041 3300025245 Bacteria 1066
50 Ga0209129_1000474 3300025258 Bacteria 29449
51 Ga0209129_1004715 3300025258 Bacteria 5176
52 Ga0209673_1010853 3300025273 Bacteria 3806
53 Ga0209130_1000001 3300025284 Bacteria 831557
54 Ga0209130_1000316 3300025284 Bacteria 56951
55 Ga0209130_1003765 3300025284 Bacteria 6187
56 Ga0209675_1000386 3300025291 Bacteria 36723
57 Ga0209676_1000580 3300025292 Bacteria 55127
58 Ga0209025_1001472 3300025294 Bacteria 30658
59 Ga0209025_1011278 3300025294 Bacteria 5913
60 Ga0209564_1005423 3300025295 Bacteria 7292
61 Ga0209758_1001509 3300025297 Bacteria 27022
62 Ga0209758_1001568 3300025297 Bacteria 26208
63 Ga0209758_1002153 3300025297 Bacteria 20721
64 Ga0209758_1021098 3300025297 Bacteria 3051
65 Ga0209758_1022826 3300025297 Bacteria 2852
66 Ga0209050_1011385 3300025298 Bacteria 4226
67 Ga0207426_1000005 3300025302 Bacteria 1037188
68 Ga0207426_1000179 3300025302 Bacteria 158635
69 Ga0209051_1004819 3300025303 Bacteria 8127
70 Ga0209051_1005591 3300025303 Bacteria 7289
71 Ga0209257_1001372 3300025304 Bacteria 29358
72 Ga0209257_1024830 3300025304 Bacteria 2063
73 Ga0207647_10028561 3300025904 Bacteria 3620
74 Ga0207645_10153047 3300025907 Bacteria 1506
75 Ga0207704_10135914 3300025938 Bacteria 1711
76 Ga0207658_10350522 3300025986 Bacteria 1285
77 Ga0207639_10030037 3300026041 Bacteria 3984
78 Ga0209281_1000303 3300027111 Bacteria 88888
79 Ga0209371_1000012 3300027312 Bacteria 748304
80 Ga0209371_1001273 3300027312 Bacteria 17845
81 Ga0209282_1032359 3300027666 Bacteria 3199
82 Ga0268266_10169202 3300028379 Bacteria 1982
83 Ga0307515_10000208 3300028794 Bacteria 144484
84 Ga0307515_10025493 3300028794 Bacteria 10227
85 Ga0268256_1000013 3300030500 Bacteria 752103
86 Ga0268256_1004177 3300030500 Bacteria 6110
87 Ga0307512_10049245 3300030522 Bacteria 3399
88 Ga0316181_1190971 3300030744 Bacteria 1614
89 Ga0265327_10000839 3300031251 Bacteria 45899
90 Ga0307513_10000220 3300031456 Bacteria 82568
91 Ga0307513_10010006 3300031456 Bacteria 11958
92 Ga0307408_100282114 3300031548 Bacteria 1384
93 Ga0307508_10005720 3300031616 Bacteria 11769
94 Ga0307514_10003264 3300031649 Bacteria 15822
95 Ga0307516_10096474 3300031730 Bacteria 2777
96 Ga0307516_10104627 3300031730 Bacteria 2642
97 Ga0307405_10066601 3300031731 Bacteria 2297
98 Ga0307405_10069728 3300031731 Bacteria 2255
99 Ga0307413_10151023 3300031824 Bacteria 1619
100 Ga0307410_10048373 3300031852 Bacteria 2848
101 Ga0307410_10257762 3300031852 Bacteria 1359
102 Ga0307406_10032007 3300031901 Bacteria 3207
103 Ga0307407_10282462 3300031903 Bacteria 1150
104 Ga0307412_10100376 3300031911 Bacteria 2046
105 Ga0307409_100011991 3300031995 Bacteria 5499
106 Ga0307409_100185338 3300031995 Bacteria 1847
107 Ga0307416_100065566 3300032002 Bacteria 2985
108 Ga0307416_100812004 3300032002 Bacteria 1032
109 Ga0307414_10263719 3300032004 Bacteria 1439
110 Ga0307510_10235697 3300033180 Bacteria 1329
111 Ga0439465_0031726 3300041413 Bacteria 1685
112 Ga0451837_0567618 3300041494 Bacteria 1431
113 Ga0439431_0037634 3300041997 Bacteria 1222
114 Ga0439434_0030280 3300042435 Bacteria 1643
115 Ga0495670_0173020 3300046691 Bacteria 1138
116 Ga0495681_0001593 3300047470 Bacteria 16868
117 Ga0496100_0072836 3300048903 Bacteria 2297
118 Ga0496102_0016536 3300048905 Bacteria 6447
119 Ga0496103_0005762 3300048906 Bacteria 7395
120 Ga0496104_0011044 3300048907 Bacteria 8080
121 Ga0496105_0013436 3300048908 Bacteria 6500
122 Ga0496116_0031418 3300048919 Bacteria 3802
123 Ga0496117_0000083 3300048920 Bacteria 218945
124 Ga0496118_0005403 3300048921 Bacteria 14538
125 Ga0496118_0119943 3300048921 Bacteria 1718
126 Ga0496120_0000030 3300048923 Bacteria 226066
127 Ga0496121_0027209 3300048924 Bacteria 5357
128 Ga0496122_0000050 3300048925 Bacteria 267874
129 Ga0496122_0001904 3300048925 Bacteria 31539
130 Ga0496122_0009080 3300048925 Bacteria 10545
131 Ga0496123_0000052 3300048926 Bacteria 236409
132 Ga0496123_0007584 3300048926 Bacteria 10167
133 Ga0496123_0007865 3300048926 Bacteria 9912
134 Ga0496124_0000131 3300048927 Bacteria 156256
135 Ga0496124_0007622 3300048927 Bacteria 11469
136 Ga0496124_0042006 3300048927 Bacteria 3940
137 Ga0496124_0100820 3300048927 Bacteria 2340
138 Ga0496125_0001636 3300048928 Bacteria 31581
139 Ga0496125_0199913 3300048928 Bacteria 1310
140 Ga0496126_0269504 3300048929 Bacteria 1413
141 Ga0501032_0019731 3300049569 Bacteria 4709
142 Ga0501034_0000162 3300049571 Bacteria 125834
143 Ga0501034_0160095 3300049571 Bacteria 2222
144 Ga0501034_0349150 3300049571 Bacteria 1408
145 Ga0501036_0134976 3300049572 Bacteria 2083
146 Ga0501036_0176412 3300049572 Bacteria 1799
147 Ga0501037_0012237 3300049573 Bacteria 6316
148 Ga0501038_0002566 3300049574 Bacteria 16937
149 Ga0501038_0051400 3300049574 Bacteria 3556
150 Ga0501043_0138570 3300049579 Bacteria 1905
151 Ga0501067_0222275 3300049583 Bacteria 1052
152 Ga0501070_0010252 3300049586 Bacteria 7927
153 nmdc:mga03683_35889_c1 3300050489 Bacteria 2014
154 nmdc:mga03n38_35615_c1 3300050490 Bacteria 2134
155 nmdc:mga00v17_34_c1 3300050491 Bacteria 85919
156 nmdc:mga00v17_68_c1 3300050491 Bacteria 62705
157 nmdc:mga0yw44_23373_c1 3300050492 Bacteria 3482
158 nmdc:mga0k408_38344_c1 3300050493 Bacteria 2750
159 nmdc:mga07m45_31526_c2 3300050496 Bacteria 1897
160 nmdc:mga0sz30_2140_c1 3300050516 Bacteria 7060
161 Ga0500556_0000487 3300053104 Bacteria 27710
162 Ga0500562_032097 3300053108 Bacteria 1386
163 Ga0500593_001646 3300053117 Bacteria 8053
164 Ga0500559_0000151 3300053136 Bacteria 54813
165 Ga0500568_0053010 3300053139 Bacteria 1591
166 Ga0500616_0000356 3300053153 Bacteria 65087
167 Ga0500622_0000836 3300053156 Bacteria 26294
168 Ga0500634_0000020 3300053161 Bacteria 106250

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005353 Ga0070669_100262742 Ga0070669_1002627422 242
2 3300005548 Ga0070665_100117344 Ga0070665_1001173442 242
3 3300028379 Ga0268266_10169202 Ga0268266_101692022 242
4 3300006051 Ga0075364_10042080 Ga0075364_100420803 260
5 3300049572 Ga0501036_0134976 Ga0501036_0134976_664_1536 260
6 3300049583 Ga0501067_0222275 Ga0501067_0222275_153_1025 260
7 iso_pu_bacteria 2511231027 2511391163 261
8 3300031730 Ga0307516_10096474 Ga0307516_100964742 262
9 3300048925 Ga0496122_0001904 Ga0496122_0001904_7438_8379 264
10 3300048926 Ga0496123_0007865 Ga0496123_0007865_3423_4364 264
11 3300005539 Ga0068853_100030606 Ga0068853_1000306063 265
12 3300048929 Ga0496126_0269504 Ga0496126_0269504_177_1049 265
13 3300049571 Ga0501034_0160095 Ga0501034_0160095_645_1517 265
14 3300049572 Ga0501036_0176412 Ga0501036_0176412_322_1194 265
15 3300049573 Ga0501037_0012237 Ga0501037_0012237_1185_2057 265
16 3300049574 Ga0501038_0002566 Ga0501038_0002566_1327_2199 265
17 3300049579 Ga0501043_0138570 Ga0501043_0138570_417_1289 265
18 3300049586 Ga0501070_0010252 Ga0501070_0010252_2561_3433 265
19 3300053108 Ga0500562_032097 Ga0500562_032097_492_1364 265
20 iso_pu_bacteria 2932431166 2932433750 266
21 iso_pu_bacteria 2739367654 2739607853 267
22 iso_pu_bacteria 2758568522 2760304143 267
23 iso_pu_bacteria 2758568621 2760621908 267
24 iso_pu_bacteria 2808606394 2809026750 267
25 iso_pu_bacteria 8056579771 8056580869 267
26 iso_pu_bacteria 2887478801 2887480193 268
27 iso_pu_bacteria 8001781756 8001787529 268
28 3300027312 Ga0209371_1001273 Ga0209371_100127313 269
29 3300030500 Ga0268256_1004177 Ga0268256_10041772 269
30 iso_pu_bacteria 2738543027 2739323811 271
31 3300032004 Ga0307414_10263719 Ga0307414_102637192 272
32 iso_pu_bacteria 2842871566 2842874114 272
33 iso_pu_bacteria 2837268691 2837270691 273
34 iso_pu_bacteria 2984518228 2984518458 274
35 3300031730 Ga0307516_10104627 Ga0307516_101046273 275
36 3300049571 Ga0501034_0349150 Ga0501034_0349150_247_1182 275
37 3300053153 Ga0500616_0000356 Ga0500616_0000356_64016_64948 275
38 iso_pu_bacteria 2501939600 2501945051 275
39 iso_pu_bacteria 2856858025 2856864184 275
40 iso_pu_bacteria 2906799679 2906801245 275
41 iso_pu_bacteria 649633069 649814276 275
42 iso_pu_bacteria 2643221591 2643962858 276
43 iso_pu_bacteria 2831935698 2831938940 276
44 iso_pu_bacteria 2844533157 2844533211 276
45 iso_pu_bacteria 2858868258 2858870721 276
46 3300031731 Ga0307405_10069728 Ga0307405_100697282 277
47 3300031911 Ga0307412_10100376 Ga0307412_101003762 277
48 3300031995 Ga0307409_100185338 Ga0307409_1001853382 277
49 3300048928 Ga0496125_0001636 Ga0496125_0001636_4281_5198 277
50 iso_pu_bacteria 2643221580 2643912281 277
51 iso_pu_bacteria 2643221674 2644410593 277
52 3300003187 JGI25151J46595_10000722 JGI25151J46595_1000072213 278
53 3300025294 Ga0209025_1001472 Ga0209025_100147213 278
54 3300025297 Ga0209758_1002153 Ga0209758_100215314 278
55 3300041997 Ga0439431_0037634 Ga0439431_0037634_115_1041 278
56 3300053136 Ga0500559_0000151 Ga0500559_0000151_29261_30202 278
57 iso_pu_bacteria 2510917026 2511169272 278
58 iso_pu_bacteria 2510917030 2511195756 278
59 iso_pu_bacteria 2513237138 2513867116 278
60 iso_pu_bacteria 2513237144 2513914491 278
61 iso_pu_bacteria 2523231067 2523468213 278
62 iso_pu_bacteria 2537561587 2537875108 278
63 iso_pu_bacteria 2554235003 2554244417 278
64 iso_pu_bacteria 2558860242 2559297776 278
65 iso_pu_bacteria 2582581298 2585221794 278
66 iso_pu_bacteria 2585427529 2585544036 278
67 iso_pu_bacteria 2585427633 2585996357 278
68 iso_pu_bacteria 2585427634 2586000965 278
69 iso_pu_bacteria 2599185156 2599334597 278
70 iso_pu_bacteria 2599185210 2599604966 278
71 iso_pu_bacteria 2599185236 2599724289 278
72 iso_pu_bacteria 2600255279 2601611422 278
73 iso_pu_bacteria 2600255279 2601612652 278
74 iso_pu_bacteria 2600255308 2601748157 278
75 iso_pu_bacteria 2600255308 2601749756 278
76 iso_pu_bacteria 2643221582 2643921967 278
77 iso_pu_bacteria 2643221629 2644164241 278
78 iso_pu_bacteria 2643221634 2644192108 278
79 iso_pu_bacteria 2643221662 2644348097 278
80 iso_pu_bacteria 2643221693 2644522592 278
81 iso_pu_bacteria 2738543013 2739249505 278
82 iso_pu_bacteria 2757320392 2757571876 278
83 iso_pu_bacteria 2808606387 2808989256 278
84 iso_pu_bacteria 2818991439 2819561861 278
85 iso_pu_bacteria 2821123053 2821130890 278
86 iso_pu_bacteria 2835312727 2835318173 278
87 iso_pu_bacteria 2838661181 2838661983 278
88 iso_pu_bacteria 2838675328 2838679142 278
89 iso_pu_bacteria 2838714209 2838718987 278
90 iso_pu_bacteria 2838719591 2838723986 278
91 iso_pu_bacteria 2838724970 2838728820 278
92 iso_pu_bacteria 2838736955 2838741940 278
93 iso_pu_bacteria 2841840854 2841845644 278
94 iso_pu_bacteria 2841846520 2841850111 278
95 iso_pu_bacteria 2841859092 2841861933 278
96 iso_pu_bacteria 2842124991 2842128583 278
97 iso_pu_bacteria 2842130223 2842134044 278
98 iso_pu_bacteria 2842140634 2842145348 278
99 iso_pu_bacteria 2842152218 2842156040 278
100 iso_pu_bacteria 2842170452 2842175233 278
101 iso_pu_bacteria 2842175837 2842179867 278
102 iso_pu_bacteria 2842187318 2842191880 278
103 iso_pu_bacteria 2842211629 2842216197 278
104 iso_pu_bacteria 2842224351 2842228751 278
105 iso_pu_bacteria 2842515876 2842517801 278
106 iso_pu_bacteria 2842922631 2842927327 278
107 iso_pu_bacteria 2854896431 2854896746 278
108 iso_pu_bacteria 2854916844 2854920503 278
109 iso_pu_bacteria 2857531043 2857536929 278
110 iso_pu_bacteria 2899803654 2899804878 278
111 iso_pu_bacteria 2899845264 2899849771 278
112 iso_pu_bacteria 2919100787 2919103250 278
113 iso_pu_bacteria 2919114240 2919117862 278
114 iso_pu_bacteria 2919171160 2919174069 278
115 iso_pu_bacteria 2926754445 2926757668 278
116 iso_pu_bacteria 2926760298 2926764717 278
117 iso_pu_bacteria 2933006813 2933010267 278
118 iso_pu_bacteria 2933011516 2933013430 278
119 iso_pu_bacteria 2933016740 2933020716 278
120 iso_pu_bacteria 2933594066 2933599187 278
121 iso_pu_bacteria 2979089926 2979090168 278
122 iso_pu_bacteria 2979095461 2979095701 278
123 iso_pu_bacteria 2979100975 2979101210 278
124 iso_pu_bacteria 2984509177 2984510842 278
125 iso_pu_bacteria 2984537506 2984539191 278
126 iso_pu_bacteria 2984601300 2984605898 278
127 iso_pu_bacteria 650716007 650842496 278
128 iso_pu_bacteria 8003570095 8003572090 278
129 3300049569 Ga0501032_0019731 Ga0501032_0019731_1518_2480 279
130 3300049571 Ga0501034_0000162 Ga0501034_0000162_44336_45250 279
131 3300049574 Ga0501038_0051400 Ga0501038_0051400_1192_2154 279
132 iso_pu_bacteria 2866065130 2866065218 279
133 iso_pu_bacteria 2880489317 2880490749 279
134 iso_pu_bacteria 8054704163 8054705745 279
135 iso_pu_bacteria 8054734606 8054735408 279
136 3300031731 Ga0307405_10066601 Ga0307405_100666012 280
137 3300031852 Ga0307410_10048373 Ga0307410_100483732 280
138 3300031903 Ga0307407_10282462 Ga0307407_102824622 280
139 3300031995 Ga0307409_100011991 Ga0307409_1000119912 280
140 3300032002 Ga0307416_100065566 Ga0307416_1000655663 280
141 3300041494 Ga0451837_0567618 Ga0451837_0567618_412_1356 280
142 3300048927 Ga0496124_0100820 Ga0496124_0100820_1188_2108 280
143 3300002739 JGI25158J39367_1000537 JGI25158J39367_10005375 281
144 3300002773 JGI25152J39213_1002537 JGI25152J39213_10025376 281
145 3300002773 JGI25152J39213_1006946 JGI25152J39213_10069463 281
146 3300002774 JGI25150J39212_1003730 JGI25150J39212_10037302 281
147 3300002987 JGI25159J45721_1016308 JGI25159J45721_10163082 281
148 3300003215 JGI25153J46596_10004825 JGI25153J46596_100048256 281
149 3300003215 JGI25153J46596_10029145 JGI25153J46596_100291452 281
150 3300003316 rootH1_10138977 rootH1_101389772 281
151 3300003320 rootH2_10004052 rootH2_100040523 281
152 3300003322 rootL2_10026687 rootL2_100266872 281
153 3300003354 JGI25160J50197_1013106 JGI25160J50197_10131063 281
154 3300003374 JGI25161J50226_1000119 JGI25161J50226_100011925 281
155 3300003771 Ga0055526_1006985 Ga0055526_10069853 281
156 3300003775 Ga0055524_1005157 Ga0055524_10051573 281
157 3300003781 Ga0055536_1003653 Ga0055536_10036538 281
158 3300003781 Ga0055536_1010978 Ga0055536_10109783 281
159 3300003784 Ga0055534_1000774 Ga0055534_100077413 281
160 3300003791 Ga0055530_10013041 Ga0055530_100130413 281
161 3300003792 Ga0055540_1005433 Ga0055540_10054334 281
162 3300003792 Ga0055540_1011430 Ga0055540_10114302 281
163 3300003794 Ga0055531_10002995 Ga0055531_1000299510 281
164 3300004625 Ga0055543_1000616 Ga0055543_100061614 281
165 3300005262 Ga0065165_1021483 Ga0065165_10214832 281
166 3300006051 Ga0075364_10000332 Ga0075364_1000033213 281
167 3300006177 Ga0075362_10061200 Ga0075362_100612001 281
168 3300006186 Ga0075369_10011489 Ga0075369_100114892 281
169 3300006195 Ga0075366_10020969 Ga0075366_100209692 281
170 3300006353 Ga0075370_10083870 Ga0075370_100838702 281
171 3300006946 Ga0079104_1000360 Ga0079104_100036052 281
172 3300006948 Ga0099826_10025188 Ga0099826_100251882 281
173 3300013100 Ga0157373_10016615 Ga0157373_100166153 281
174 3300013102 Ga0157371_10000005 Ga0157371_10000005234 281
175 3300013104 Ga0157370_10000437 Ga0157370_1000043710 281
176 3300013105 Ga0157369_10277652 Ga0157369_102776522 281
177 3300013306 Ga0163162_10043914 Ga0163162_100439144 281
178 3300014497 Ga0182008_10004563 Ga0182008_100045636 281
179 3300015262 Ga0182007_10002265 Ga0182007_100022657 281
180 3300025208 Ga0209436_100017 Ga0209436_10001731 281
181 3300025245 Ga0207425_1000475 Ga0207425_100047512 281
182 3300025245 Ga0207425_1031041 Ga0207425_10310411 281
183 3300025258 Ga0209129_1000474 Ga0209129_10004747 281
184 3300025258 Ga0209129_1004715 Ga0209129_10047154 281
185 3300025273 Ga0209673_1010853 Ga0209673_10108533 281
186 3300025284 Ga0209130_1000001 Ga0209130_100000149 281
187 3300025284 Ga0209130_1000316 Ga0209130_100031642 281
188 3300025284 Ga0209130_1003765 Ga0209130_10037656 281
189 3300025291 Ga0209675_1000386 Ga0209675_100038619 281
190 3300025292 Ga0209676_1000580 Ga0209676_100058050 281
191 3300025294 Ga0209025_1011278 Ga0209025_10112783 281
192 3300025295 Ga0209564_1005423 Ga0209564_10054234 281
193 3300025297 Ga0209758_1001509 Ga0209758_100150917 281
194 3300025297 Ga0209758_1001568 Ga0209758_100156817 281
195 3300025297 Ga0209758_1021098 Ga0209758_10210982 281
196 3300025297 Ga0209758_1022826 Ga0209758_10228262 281
197 3300025298 Ga0209050_1011385 Ga0209050_10113855 281
198 3300025302 Ga0207426_1000005 Ga0207426_1000005654 281
199 3300025302 Ga0207426_1000179 Ga0207426_1000179103 281
200 3300025303 Ga0209051_1004819 Ga0209051_10048194 281
201 3300025303 Ga0209051_1005591 Ga0209051_10055916 281
202 3300025304 Ga0209257_1001372 Ga0209257_100137224 281
203 3300025304 Ga0209257_1024830 Ga0209257_10248302 281
204 3300025907 Ga0207645_10153047 Ga0207645_101530471 281
205 3300025938 Ga0207704_10135914 Ga0207704_101359141 281
206 3300027111 Ga0209281_1000303 Ga0209281_100030348 281
207 3300027312 Ga0209371_1000012 Ga0209371_1000012396 281
208 3300027666 Ga0209282_1032359 Ga0209282_10323593 281
209 3300028794 Ga0307515_10000208 Ga0307515_1000020877 281
210 3300028794 Ga0307515_10025493 Ga0307515_100254933 281
211 3300030500 Ga0268256_1000013 Ga0268256_1000013396 281
212 3300030744 Ga0316181_1190971 Ga0316181_11909712 281
213 3300031251 Ga0265327_10000839 Ga0265327_1000083929 281
214 3300032002 Ga0307416_100812004 Ga0307416_1008120041 281
215 3300041413 Ga0439465_0031726 Ga0439465_0031726_683_1609 281
216 3300042435 Ga0439434_0030280 Ga0439434_0030280_484_1410 281
217 3300046691 Ga0495670_0173020 Ga0495670_0173020_38_973 281
218 3300047470 Ga0495681_0001593 Ga0495681_0001593_2264_3196 281
219 3300048903 Ga0496100_0072836 Ga0496100_0072836_1063_1998 281
220 3300048905 Ga0496102_0016536 Ga0496102_0016536_4042_4977 281
221 3300048906 Ga0496103_0005762 Ga0496103_0005762_1011_1946 281
222 3300048907 Ga0496104_0011044 Ga0496104_0011044_1392_2327 281
223 3300048908 Ga0496105_0013436 Ga0496105_0013436_1392_2327 281
224 3300048919 Ga0496116_0031418 Ga0496116_0031418_477_1409 281
225 3300048920 Ga0496117_0000083 Ga0496117_0000083_23455_24387 281
226 3300048921 Ga0496118_0005403 Ga0496118_0005403_9512_10444 281
227 3300048921 Ga0496118_0119943 Ga0496118_0119943_71_1000 281
228 3300048923 Ga0496120_0000030 Ga0496120_0000030_39277_40209 281
229 3300048924 Ga0496121_0027209 Ga0496121_0027209_4396_5328 281
230 3300048925 Ga0496122_0000050 Ga0496122_0000050_178285_179217 281
231 3300048925 Ga0496122_0009080 Ga0496122_0009080_2566_3498 281
232 3300048926 Ga0496123_0000052 Ga0496123_0000052_185397_186329 281
233 3300048926 Ga0496123_0007584 Ga0496123_0007584_2647_3579 281
234 3300048927 Ga0496124_0000131 Ga0496124_0000131_43270_44205 281
235 3300048927 Ga0496124_0007622 Ga0496124_0007622_10139_11071 281
236 3300048927 Ga0496124_0042006 Ga0496124_0042006_30_962 281
237 3300048928 Ga0496125_0199913 Ga0496125_0199913_316_1248 281
238 3300050489 nmdc:mga03683_35889_c1 nmdc:mga03683_35889_c1_1024_1956 281
239 3300050490 nmdc:mga03n38_35615_c1 nmdc:mga03n38_35615_c1_127_1059 281
240 3300050491 nmdc:mga00v17_34_c1 nmdc:mga00v17_34_c1_10049_10981 281
241 3300050491 nmdc:mga00v17_68_c1 nmdc:mga00v17_68_c1_11613_12545 281
242 3300050492 nmdc:mga0yw44_23373_c1 nmdc:mga0yw44_23373_c1_1527_2459 281
243 3300050493 nmdc:mga0k408_38344_c1 nmdc:mga0k408_38344_c1_573_1508 281
244 3300050496 nmdc:mga07m45_31526_c2 nmdc:mga07m45_31526_c2_517_1443 281
245 3300050516 nmdc:mga0sz30_2140_c1 nmdc:mga0sz30_2140_c1_2434_3366 281
246 3300053139 Ga0500568_0053010 Ga0500568_0053010_280_1206 281
247 3300053156 Ga0500622_0000836 Ga0500622_0000836_25026_25958 281
248 3300053161 Ga0500634_0000020 Ga0500634_0000020_45795_46721 281
249 iso_pu_bacteria 2643221635 2644198105 281
250 iso_pu_bacteria 2821443989 2821449665 281
251 iso_pu_bacteria 2939657138 2939659119 281
252 3300026041 Ga0207639_10030037 Ga0207639_100300372 282
253 3300030522 Ga0307512_10049245 Ga0307512_100492452 282
254 3300031456 Ga0307513_10010006 Ga0307513_100100062 282
255 3300031616 Ga0307508_10005720 Ga0307508_100057202 282
256 3300031649 Ga0307514_10003264 Ga0307514_100032645 282
257 3300033180 Ga0307510_10235697 Ga0307510_102356972 282
258 iso_pu_bacteria 2945968032 2945969546 283
259 3300053104 Ga0500556_0000487 Ga0500556_0000487_22625_23575 284
260 3300053117 Ga0500593_001646 Ga0500593_001646_4053_5003 284
261 iso_pu_bacteria 8046352972 8046355388 284
262 3300031548 Ga0307408_100282114 Ga0307408_1002821142 285
263 3300031824 Ga0307413_10151023 Ga0307413_101510232 285
264 3300031852 Ga0307410_10257762 Ga0307410_102577622 285
265 3300031901 Ga0307406_10032007 Ga0307406_100320074 285
266 3300031456 Ga0307513_10000220 Ga0307513_1000022060 286
267 3300001979 JGI24740J21852_10014922 JGI24740J21852_100149222 287
268 3300001989 JGI24739J22299_10017539 JGI24739J22299_100175392 287
269 3300001990 JGI24737J22298_10003884 JGI24737J22298_100038843 287
270 3300005367 Ga0070667_100096232 Ga0070667_1000962321 287
271 3300025904 Ga0207647_10028561 Ga0207647_100285613 287
272 3300025986 Ga0207658_10350522 Ga0207658_103505222 287

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

11

290

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.7503 25 272
8hps-assembly1.cif.gz_A lpqy-sugabc in state 5 0.7294 24 272
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.7229 59 257
8hpl-assembly1.cif.gz_A lpqy-sugabc in state 1 0.7178 25 271
8ja7-assembly1.cif.gz_A cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.7007 24 272
ID Description Score Start End Superfamily
af_P71745_27_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7364 34 243 1.10.3720.10
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7295 69 273 1.10.3720.10
af_P0AF01_2_224_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.729 89 244 1.10.3720.10
af_P9WG03_18_293_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7228 24 272 1.10.3720.10
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7201 69 274 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A527FWK6-F1-model_v4 deleted 0.7819 24 257
AF-A0A5B9YHX2-F1-model_v4 Sugar ABC transporter permease 0.7745 43 272 GO:0005886
GO:0055085
AF-A0A3S3R4L8-F1-model_v4 Sugar ABC transporter permease 0.7709 41 267 GO:0005886
GO:0055085
AF-A0A087M7H3-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.7701 32 271 GO:0005886
GO:0055085
AF-A0A4A1NYM0-F1-model_v4 deleted 0.7688 23 245

Feature Viewer

pLDDT pTM Quality
70.81 0.56 Medium
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Predicted Structure (AlphaFold2)

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