F377994

General Info

Members Datasets Scaffolds Average Seq Length
271 226 542 341

Family's Representative Sequence

Representative Sequence 3300053177|Ga0500636_0010084|Ga0500636_0010084_1825_2838
Length 337
Sequence MEARSVDAIPQGGEWQYEPKWDGFRCLLSRQGGRVTMHSKAGEDLTRYFPEVVAAASELKADNFVLDGELVVPQGKAFSFDALLQRIHPAASRVNKLAAETPALFIAFDLLATAKQPRLSEQPLTVRRPALEAFAKAGFGKAHPTFHLSSVTASFATAQKWLARAGGGCDGVIAKRIDLPYQAGNRDGMQKIKHYRSADCVIGGFRYATNKSGGAKVVGSLLLGLYDEEGLLHHVGFTSAIKADEKPGLTAKLEPLIAAQSFTGNTPGGPSRWSTERSTQWCPLQPKLVVEISYDHFSGERFRHGTSILRWRPDKSPKQCTFDQLKQRAVDPMKLLA

Samples

Sample ID Description Type Environment
1 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
46 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
47 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
48 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
51 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
80 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
81 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
82 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
103 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
104 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
124 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
125 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
126 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
127 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
128 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
129 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
130 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
131 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
132 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
133 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
134 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
135 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
136 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
137 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
138 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
139 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
140 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
141 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
142 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
143 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
144 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
145 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
146 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
147 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
148 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
149 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
150 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
151 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
152 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
153 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
154 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
155 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
156 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
157 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
158 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
159 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
160 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
161 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
162 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
163 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
164 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
165 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
166 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
167 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
168 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
169 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
170 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
171 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
172 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
173 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
174 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
175 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
176 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
177 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
178 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
179 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
180 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
181 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
182 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
183 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
184 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
185 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
186 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
187 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
188 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
189 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
190 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
191 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
192 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
193 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
194 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
195 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
196 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
197 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
198 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
199 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
200 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
201 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
202 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
203 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
204 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
205 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
206 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
207 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
208 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
209 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
210 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
211 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
212 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
213 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
214 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
215 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
216 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
217 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
218 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
219 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
220 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
221 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
222 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
223 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
224 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
225 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
226 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 63.47
Metatranscriptomes 0
Isolates 36.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.23
Nodule 30.26
Rhizoplane 4.8
Rhizosphere 40.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500636_0010084 3300053177 Bacteria 5504
2 JGI25153J46596_10011202 3300003215 Bacteria 3982
3 JGI25153J46596_10011460 3300003215 Bacteria 3917
4 rootL2_10125147 3300003322 Bacteria 3167
5 JGI25160J50197_1011610 3300003354 Bacteria 3110
6 Ga0055531_10006698 3300003794 Bacteria 6454
7 Ga0065165_1022336 3300005262 Bacteria 2172
8 Ga0070658_10157555 3300005327 Bacteria 1904
9 Ga0070658_10237451 3300005327 Bacteria 1544
10 Ga0070683_100047357 3300005329 Bacteria 3972
11 Ga0070680_100014818 3300005336 Bacteria 6097
12 Ga0070680_100083635 3300005336 Bacteria 2636
13 Ga0070660_100006148 3300005339 Bacteria 8306
14 Ga0070659_100105500 3300005366 Bacteria 2271
15 Ga0070659_100186766 3300005366 Bacteria 1702
16 Ga0070714_100006113 3300005435 Bacteria 9251
17 Ga0070713_100008270 3300005436 Bacteria 7375
18 Ga0070713_100013621 3300005436 Bacteria 6013
19 Ga0070710_10000629 3300005437 Bacteria 16796
20 Ga0070710_10169362 3300005437 Bacteria 1360
21 Ga0070711_100025326 3300005439 Bacteria 3881
22 Ga0070711_100032176 3300005439 Bacteria 3486
23 Ga0070681_10029292 3300005458 Bacteria 5529
24 Ga0070681_10096313 3300005458 Bacteria 2907
25 Ga0070681_10393701 3300005458 Bacteria 1296
26 Ga0070679_100054748 3300005530 Bacteria 3973
27 Ga0070679_100100515 3300005530 Bacteria 2878
28 Ga0070679_100136856 3300005530 Bacteria 2430
29 Ga0070684_100003879 3300005535 Bacteria 11314
30 Ga0068853_100004106 3300005539 Bacteria 11217
31 Ga0068853_100055625 3300005539 Bacteria 3410
32 Ga0068855_100010117 3300005563 Bacteria 11368
33 Ga0068855_100110153 3300005563 Bacteria 3161
34 Ga0068855_100301171 3300005563 Bacteria 1775
35 Ga0070664_100257192 3300005564 Bacteria 1570
36 Ga0068857_100044584 3300005577 Bacteria 3934
37 Ga0068851_10014341 3300005834 Bacteria 3762
38 Ga0068862_100321014 3300005844 Bacteria 1429
39 Ga0081540_1040270 3300005983 Bacteria 2437
40 Ga0081540_1076866 3300005983 Bacteria 1519
41 Ga0075368_10038228 3300006042 Bacteria 1878
42 Ga0075363_100150499 3300006048 Bacteria 1313
43 Ga0070715_10013703 3300006163 Bacteria 2984
44 Ga0070716_100000748 3300006173 Bacteria 13913
45 Ga0070712_100050294 3300006175 Bacteria 2899
46 Ga0075370_10047854 3300006353 Bacteria 2421
47 Ga0075370_10087731 3300006353 Bacteria 1793
48 Ga0068865_100134642 3300006881 Bacteria 1855
49 Ga0099824_1016492 3300006942 Bacteria 6678
50 Ga0099794_10047110 3300007265 Bacteria 2066
51 Ga0105240_10437870 3300009093 Bacteria 1465
52 Ga0105237_10005399 3300009545 Bacteria 14437
53 Ga0105237_10178614 3300009545 Bacteria 2123
54 Ga0105238_10013776 3300009551 Bacteria 8172
55 Ga0105238_10183031 3300009551 Bacteria 2072
56 Ga0099796_10009195 3300010159 Bacteria 2665
57 Ga0105239_10026554 3300010375 Bacteria 6373
58 Ga0105239_10546658 3300010375 Bacteria 1319
59 Ga0157370_10031229 3300013104 Bacteria 5213
60 Ga0157369_10010838 3300013105 Bacteria 10382
61 Ga0157372_10565952 3300013307 Bacteria 1325
62 Ga0157380_10239992 3300014326 Bacteria 1633
63 Ga0157376_10305597 3300014969 Bacteria 1507
64 Ga0214544_1000056 3300021320 Bacteria 132760
65 Ga0214542_1000071 3300021321 Bacteria 124568
66 Ga0214545_1000033 3300021324 Bacteria 124568
67 Ga0214545_1017529 3300021324 Bacteria 6890
68 Ga0214543_1000105 3300021327 Bacteria 108404
69 Ga0213876_10006876 3300021384 Bacteria 6200
70 Ga0213876_10038578 3300021384 Bacteria 2522
71 Ga0207425_1010934 3300025245 Bacteria 2189
72 Ga0209564_1019611 3300025295 Bacteria 2518
73 Ga0209758_1000293 3300025297 Bacteria 98643
74 Ga0209758_1000363 3300025297 Bacteria 80753
75 Ga0209758_1002182 3300025297 Bacteria 20519
76 Ga0209758_1002431 3300025297 Bacteria 19009
77 Ga0209758_1043529 3300025297 Bacteria 1653
78 Ga0209256_1004281 3300025299 Bacteria 9095
79 Ga0207426_1034482 3300025302 Bacteria 1623
80 Ga0209257_1002446 3300025304 Bacteria 18464
81 Ga0207656_10001430 3300025321 Bacteria 7907
82 Ga0207699_10003638 3300025906 Bacteria 7367
83 Ga0207699_10110683 3300025906 Bacteria 1759
84 Ga0207705_10216617 3300025909 Bacteria 1453
85 Ga0207707_10045338 3300025912 Bacteria 3831
86 Ga0207707_10186496 3300025912 Bacteria 1810
87 Ga0207707_10265774 3300025912 Bacteria 1487
88 Ga0207695_10044606 3300025913 Bacteria 4714
89 Ga0207695_10130195 3300025913 Bacteria 2474
90 Ga0207671_10026703 3300025914 Bacteria 4323
91 Ga0207693_10025443 3300025915 Bacteria 4693
92 Ga0207660_10011019 3300025917 Bacteria 5880
93 Ga0207657_10004312 3300025919 Bacteria 15074
94 Ga0207652_10024334 3300025921 Bacteria 5023
95 Ga0207652_10033649 3300025921 Bacteria 4317
96 Ga0207681_10158781 3300025923 Bacteria 1702
97 Ga0207694_10140860 3300025924 Bacteria 1939
98 Ga0207694_10223856 3300025924 Bacteria 1535
99 Ga0207700_10002686 3300025928 Bacteria 10251
100 Ga0207700_10044840 3300025928 Bacteria 3258
101 Ga0207664_10004352 3300025929 Bacteria 9590
102 Ga0207690_10211857 3300025932 Bacteria 1478
103 Ga0207665_10001984 3300025939 Bacteria 13791
104 Ga0207665_10098141 3300025939 Bacteria 2041
105 Ga0207667_10004673 3300025949 Bacteria 16774
106 Ga0207667_10113289 3300025949 Bacteria 2796
107 Ga0207639_10016038 3300026041 Bacteria 5292
108 Ga0207678_10042420 3300026067 Bacteria 3941
109 Ga0207702_10423196 3300026078 Bacteria 1288
110 Ga0207674_10054842 3300026116 Bacteria 4056
111 Ga0207675_100055008 3300026118 Bacteria 3713
112 Ga0207698_10030121 3300026142 Bacteria 3898
113 Ga0209389_1000208 3300027296 Bacteria 42287
114 Ga0209389_1000217 3300027296 Bacteria 39758
115 Ga0209589_1000032 3300027357 Bacteria 141881
116 Ga0209489_101970 3300027361 Bacteria 42287
117 Ga0209489_102214 3300027361 Bacteria 39758
118 Ga0209700_100011 3300027363 Bacteria 362159
119 Ga0265316_10251452 3300031344 Bacteria 1298
120 Ga0307415_100036819 3300032126 Bacteria 3210
121 Ga0373943_0042093 3300035170 Bacteria 2212
122 Ga0395899_0152502 3300037312 Bacteria 1637
123 Ga0395898_0003549 3300037466 Bacteria 17388
124 Ga0395898_0012469 3300037466 Bacteria 8788
125 Ga0395905_0009607 3300037471 Bacteria 9443
126 Ga0395905_0037482 3300037471 Bacteria 4551
127 Ga0395901_0255179 3300038443 Bacteria 1826
128 Ga0436365_0444362 3300039437 Bacteria 8846
129 Ga0436365_0481915 3300039437 Bacteria 2217
130 Ga0436365_1042339 3300039437 Bacteria 5999
131 Ga0436363_1070147 3300039450 Bacteria 1662
132 Ga0436363_1349475 3300039450 Bacteria 6993
133 Ga0436362_0620707 3300039453 Bacteria 2779
134 Ga0466969_0065270 3300044656 Bacteria 1760
135 Ga0466972_0000233 3300044658 Bacteria 38493
136 Ga0466972_0134445 3300044658 Bacteria 1164
137 Ga0466966_0008284 3300044684 Bacteria 6893
138 Ga0466966_0111177 3300044684 Bacteria 1689
139 Ga0466961_0000662 3300044693 Bacteria 21706
140 Ga0466957_0090946 3300044842 Bacteria 1912
141 Ga0466960_0052594 3300044901 Bacteria 1971
142 Ga0466959_0015846 3300045049 Bacteria 5499
143 Ga0466967_0236211 3300045976 Bacteria 1742
144 Ga0495648_0001519 3300046524 Bacteria 22713
145 Ga0495598_0024790 3300046537 Bacteria 1630
146 Ga0495671_0029123 3300046692 Bacteria 2838
147 Ga0496101_0150800 3300048904 Bacteria 1778
148 Ga0496101_0184433 3300048904 Bacteria 1608
149 Ga0496102_0118616 3300048905 Bacteria 2470
150 Ga0496104_0013335 3300048907 Bacteria 7406
151 Ga0496107_0000459 3300048910 Bacteria 22278
152 Ga0496108_0000489 3300048911 Bacteria 31675
153 Ga0496109_0002105 3300048912 Bacteria 16544
154 Ga0496110_0048146 3300048913 Bacteria 3736
155 Ga0496111_0016485 3300048914 Bacteria 5092
156 Ga0496112_0001918 3300048915 Bacteria 16401
157 Ga0496113_0020045 3300048916 Bacteria 4693
158 Ga0496114_0069470 3300048917 Bacteria 2958
159 Ga0496115_0159457 3300048918 Bacteria 1864
160 Ga0496118_0047701 3300048921 Bacteria 3317
161 Ga0496121_0000786 3300048924 Bacteria 57998
162 Ga0496121_0064880 3300048924 Bacteria 2975
163 Ga0496126_0136133 3300048929 Bacteria 2119
164 Ga0501070_0020751 3300049586 Bacteria 5511
165 Ga0501073_0138697 3300049589 Bacteria 1685
166 Ga0501080_0017426 3300049742 Bacteria 6643
167 Ga0501044_0022672 3300049823 Bacteria 6686
168 nmdc:mga07m45_69841_c1 3300050496 Bacteria 1997
169 Ga0500557_000108 3300053105 Bacteria 24781
170 Ga0500642_0000272 3300053130 Bacteria 19386
171 Ga0500603_012160 3300053150 Bacteria 1971
172 Ga0500625_000529 3300053729 Bacteria 10574
173 2507505109 2507262055 Bacteria 8048963
174 2508539044 2508501009 Bacteria 7784016
175 2508695361 2508501042 Bacteria 8719808
176 2513623228 2513237092 Bacteria 8341956
177 2513677568 2513237098 Bacteria 9902361
178 2513694276 2513237101 Bacteria 7952346
179 2513699280 2513237102 Bacteria 7703324
180 2513873668 2513237139 Bacteria 8737671
181 2514012348 2513237161 Bacteria 8871253
182 2617373627 2617270741 Bacteria 8201522
183 2805915751 2802429603 Bacteria 8777136
184 2824620681 2824617872 Bacteria 8814715
185 2824629892 2824626560 Bacteria 8813858
186 2824638307 2824635225 Bacteria 8785348
187 2824651840 2824644064 Bacteria 8743947
188 2824687131 2824679649 Bacteria 8248951
189 2824695483 2824687955 Bacteria 8360029
190 2824703900 2824696289 Bacteria 8335049
191 2824721962 2824714736 Bacteria 8717648
192 2824731772 2824723954 Bacteria 8758240
193 2824740646 2824732956 Bacteria 7810675
194 2824753590 2824746037 Bacteria 7911610
195 2824760371 2824753945 Bacteria 9787441
196 2824770821 2824763712 Bacteria 9792355
197 2824775650 2824773399 Bacteria 8360218
198 2838124372 2838122688 Bacteria 8803140
199 2841945065 2841941048 Bacteria 8688029
200 2841951851 2841949485 Bacteria 8680857
201 2841973773 2841966195 Bacteria 8673214
202 2841980099 2841974524 Bacteria 8931498
203 2841985282 2841983080 Bacteria 8395090
204 2842043630 2842038055 Bacteria 8002051
205 2842052380 2842045827 Bacteria 8006841
206 2847942005 2847939898 Bacteria 8606328
207 2849082916 2849076700 Bacteria 7039503
208 2857511800 2857509624 Bacteria 7472071
209 2874597108 2874590934 Bacteria 8299676
210 2874624660 2874620515 Bacteria 8290088
211 2874646914 2874645413 Bacteria 8214782
212 2876777572 2876771140 Bacteria 8287509
213 2876825654 2876818435 Bacteria 8274608
214 2879076133 2879074833 Bacteria 8279565
215 2879089795 2879083081 Bacteria 8587928
216 2881365804 2881364244 Bacteria 7710352
217 2881665936 2881665667 Bacteria 8175609
218 2888390802 2888388044 Bacteria 7304136
219 2888420437 2888419890 Bacteria 7857137
220 2904670385 2904666416 Bacteria 8226587
221 2904715710 2904711408 Bacteria 9771557
222 2906648690 2906643746 Bacteria 8722424
223 2908776099 2908775508 Bacteria 8092255
224 2922364116 2922361189 Bacteria 7436256
225 2922396306 2922393267 Bacteria 8285685
226 2932794449 2932794094 Bacteria 7915132
227 2932806731 2932801729 Bacteria 7987968
228 2935615315 2935608549 Bacteria 8203142
229 2935654862 2935648319 Bacteria 8801166
230 2935663705 2935656913 Bacteria 8965014
231 2935782252 2935777560 Bacteria 8077691
232 2935789205 2935785616 Bacteria 7962367
233 2935797142 2935793552 Bacteria 8012592
234 2935825307 2935819856 Bacteria 8261050
235 2935853141 2935847175 Bacteria 8228321
236 2935888502 2935883170 Bacteria 7964738
237 2935910111 2935908558 Bacteria 8568796
238 2935918592 2935916978 Bacteria 9113783
239 2935927978 2935926038 Bacteria 8601059
240 2935936150 2935934488 Bacteria 8602579
241 2935944297 2935942939 Bacteria 8599779
242 2935952734 2935951376 Bacteria 8602333
243 2935969574 2935967501 Bacteria 8603075
244 2935985019 2935984226 Bacteria 8302647
245 2936017898 2936011229 Bacteria 8801034
246 2936026401 2936019824 Bacteria 8804134
247 2936031551 2936028420 Bacteria 8965941
248 2936053337 2936046547 Bacteria 8903709
249 2936056188 2936055302 Bacteria 8785755
250 3005486772 3005483717 Bacteria 7877331
251 3005509308 3005506211 Bacteria 6943378
252 3005594036 3005587118 Bacteria 7794411
253 3005594894 3005594810 Bacteria 8716512
254 8006996714 8006994254 Bacteria 8309700
255 8016526007 8016522445 Bacteria 8156687
256 8016539612 8016530956 Bacteria 8155261
257 8016543910 8016539877 Bacteria 8155419
258 8016549393 8016548790 Bacteria 8155074
259 8016557820 8016557553 Bacteria 8154380
260 8016569315 8016566248 Bacteria 8158151
261 8016581937 8016575299 Bacteria 8154085
262 8016586514 8016583857 Bacteria 10421953
263 8016595839 8016595262 Bacteria 8149947
264 8016606702 8016603502 Bacteria 8731218
265 8016618599 8016613128 Bacteria 8794220
266 8016623347 8016622563 Bacteria 7999408
267 8016635807 8016630954 Bacteria 9217207
268 8019530893 8019530166 Bacteria 8155624
269 8019540685 8019538911 Bacteria 7872763
270 8019550370 8019547302 Bacteria 7996444
271 8019696428 8019687851 Bacteria 8712826
272 Ga0500636_0010084
273 JGI25153J46596_10011202
274 JGI25153J46596_10011460
275 rootL2_10125147
276 JGI25160J50197_1011610
277 Ga0055531_10006698
278 Ga0065165_1022336
279 Ga0070658_10157555
280 Ga0070658_10237451
281 Ga0070683_100047357
282 Ga0070680_100014818
283 Ga0070680_100083635
284 Ga0070660_100006148
285 Ga0070659_100105500
286 Ga0070659_100186766
287 Ga0070714_100006113
288 Ga0070713_100008270
289 Ga0070713_100013621
290 Ga0070710_10000629
291 Ga0070710_10169362
292 Ga0070711_100025326
293 Ga0070711_100032176
294 Ga0070681_10029292
295 Ga0070681_10096313
296 Ga0070681_10393701
297 Ga0070679_100054748
298 Ga0070679_100100515
299 Ga0070679_100136856
300 Ga0070684_100003879
301 Ga0068853_100004106
302 Ga0068853_100055625
303 Ga0068855_100010117
304 Ga0068855_100110153
305 Ga0068855_100301171
306 Ga0070664_100257192
307 Ga0068857_100044584
308 Ga0068851_10014341
309 Ga0068862_100321014
310 Ga0081540_1040270
311 Ga0081540_1076866
312 Ga0075368_10038228
313 Ga0075363_100150499
314 Ga0070715_10013703
315 Ga0070716_100000748
316 Ga0070712_100050294
317 Ga0075370_10047854
318 Ga0075370_10087731
319 Ga0068865_100134642
320 Ga0099824_1016492
321 Ga0099794_10047110
322 Ga0105240_10437870
323 Ga0105237_10005399
324 Ga0105237_10178614
325 Ga0105238_10013776
326 Ga0105238_10183031
327 Ga0099796_10009195
328 Ga0105239_10026554
329 Ga0105239_10546658
330 Ga0157370_10031229
331 Ga0157369_10010838
332 Ga0157372_10565952
333 Ga0157380_10239992
334 Ga0157376_10305597
335 Ga0214544_1000056
336 Ga0214542_1000071
337 Ga0214545_1000033
338 Ga0214545_1017529
339 Ga0214543_1000105
340 Ga0213876_10006876
341 Ga0213876_10038578
342 Ga0207425_1010934
343 Ga0209564_1019611
344 Ga0209758_1000293
345 Ga0209758_1000363
346 Ga0209758_1002182
347 Ga0209758_1002431
348 Ga0209758_1043529
349 Ga0209256_1004281
350 Ga0207426_1034482
351 Ga0209257_1002446
352 Ga0207656_10001430
353 Ga0207699_10003638
354 Ga0207699_10110683
355 Ga0207705_10216617
356 Ga0207707_10045338
357 Ga0207707_10186496
358 Ga0207707_10265774
359 Ga0207695_10044606
360 Ga0207695_10130195
361 Ga0207671_10026703
362 Ga0207693_10025443
363 Ga0207660_10011019
364 Ga0207657_10004312
365 Ga0207652_10024334
366 Ga0207652_10033649
367 Ga0207681_10158781
368 Ga0207694_10140860
369 Ga0207694_10223856
370 Ga0207700_10002686
371 Ga0207700_10044840
372 Ga0207664_10004352
373 Ga0207690_10211857
374 Ga0207665_10001984
375 Ga0207665_10098141
376 Ga0207667_10004673
377 Ga0207667_10113289
378 Ga0207639_10016038
379 Ga0207678_10042420
380 Ga0207702_10423196
381 Ga0207674_10054842
382 Ga0207675_100055008
383 Ga0207698_10030121
384 Ga0209389_1000208
385 Ga0209389_1000217
386 Ga0209589_1000032
387 Ga0209489_101970
388 Ga0209489_102214
389 Ga0209700_100011
390 Ga0265316_10251452
391 Ga0307415_100036819
392 Ga0373943_0042093
393 Ga0395899_0152502
394 Ga0395898_0003549
395 Ga0395898_0012469
396 Ga0395905_0009607
397 Ga0395905_0037482
398 Ga0395901_0255179
399 Ga0436365_0444362
400 Ga0436365_0481915
401 Ga0436365_1042339
402 Ga0436363_1070147
403 Ga0436363_1349475
404 Ga0436362_0620707
405 Ga0466969_0065270
406 Ga0466972_0000233
407 Ga0466972_0134445
408 Ga0466966_0008284
409 Ga0466966_0111177
410 Ga0466961_0000662
411 Ga0466957_0090946
412 Ga0466960_0052594
413 Ga0466959_0015846
414 Ga0466967_0236211
415 Ga0495648_0001519
416 Ga0495598_0024790
417 Ga0495671_0029123
418 Ga0496101_0150800
419 Ga0496101_0184433
420 Ga0496102_0118616
421 Ga0496104_0013335
422 Ga0496107_0000459
423 Ga0496108_0000489
424 Ga0496109_0002105
425 Ga0496110_0048146
426 Ga0496111_0016485
427 Ga0496112_0001918
428 Ga0496113_0020045
429 Ga0496114_0069470
430 Ga0496115_0159457
431 Ga0496118_0047701
432 Ga0496121_0000786
433 Ga0496121_0064880
434 Ga0496126_0136133
435 Ga0501070_0020751
436 Ga0501073_0138697
437 Ga0501080_0017426
438 Ga0501044_0022672
439 nmdc:mga07m45_69841_c1
440 Ga0500557_000108
441 Ga0500642_0000272
442 Ga0500603_012160
443 Ga0500625_000529
444 2507505109
445 2508539044
446 2508695361
447 2513623228
448 2513677568
449 2513694276
450 2513699280
451 2513873668
452 2514012348
453 2617373627
454 2805915751
455 2824620681
456 2824629892
457 2824638307
458 2824651840
459 2824687131
460 2824695483
461 2824703900
462 2824721962
463 2824731772
464 2824740646
465 2824753590
466 2824760371
467 2824770821
468 2824775650
469 2838124372
470 2841945065
471 2841951851
472 2841973773
473 2841980099
474 2841985282
475 2842043630
476 2842052380
477 2847942005
478 2849082916
479 2857511800
480 2874597108
481 2874624660
482 2874646914
483 2876777572
484 2876825654
485 2879076133
486 2879089795
487 2881365804
488 2881665936
489 2888390802
490 2888420437
491 2904670385
492 2904715710
493 2906648690
494 2908776099
495 2922364116
496 2922396306
497 2932794449
498 2932806731
499 2935615315
500 2935654862
501 2935663705
502 2935782252
503 2935789205
504 2935797142
505 2935825307
506 2935853141
507 2935888502
508 2935910111
509 2935918592
510 2935927978
511 2935936150
512 2935944297
513 2935952734
514 2935969574
515 2935985019
516 2936017898
517 2936026401
518 2936031551
519 2936053337
520 2936056188
521 3005486772
522 3005509308
523 3005594036
524 3005594894
525 8006996714
526 8016526007
527 8016539612
528 8016543910
529 8016549393
530 8016557820
531 8016569315
532 8016581937
533 8016586514
534 8016595839
535 8016606702
536 8016618599
537 8016623347
538 8016635807
539 8019530893
540 8019540685
541 8019550370
542 8019696428

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

2

193

0.92

PF04679

DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

214

315

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rpw-assembly1.cif.gz_E archaeal dna ligase and heterotrimeric pcna in complex with adenylated dna 0.7482 1 186
3vnn-assembly1.cif.gz_A crystal structure of a sub-domain of the nucleotidyltransferase (adenylation) domain of human dna ligase iv 0.6747 18 145
5dis-assembly1.cif.gz_C crystal structure of a crm1-rangtp-spn1 export complex bound to a 113 amino acid fg-repeat containing fragment of nup214 0.6709 9 181
3gjx-assembly1.cif.gz_B crystal structure of the nuclear export complex crm1-snurportin1-rangtp 0.6601 9 181
3nby-assembly1.cif.gz_B crystal structure of the pki nes-crm1-rangtp nuclear export complex 0.6601 12 181
ID Description Score Start End Superfamily
af_L0TDE1_8_201_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.9017 1 181 3.30.470.30
af_P9WNV5_183_380_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.8418 15 186 3.30.470.30
af_L0TDE1_8_201_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.8401 1 181 3.30.470.30
4eq5A02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.8273 1 186 3.30.470.30
1vs0B02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.8092 23 146 3.30.470.30
ID Description Score Start End GO Terms
AF-A0A535WW92-F1-model_v4 ATP-dependent DNA ligase (EC 6.5.1.1) 0.9687 18 114 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A2V5U9A4-F1-model_v4 ATP-dependent DNA ligase 0.9447 1 165 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A534R9J8-F1-model_v4 ATP-dependent DNA ligase 0.9411 18 137 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A532B3Q8-F1-model_v4 ATP-dependent DNA ligase 0.9408 1 179 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A1S9MD17-F1-model_v4 ATP-dependent DNA ligase family profile domain-containing protein 0.9406 20 148 GO:0003910
GO:0005524
GO:0006281
GO:0006310

Map