F377932

General Info

Members Datasets Scaffolds Average Seq Length
271 181 542 234

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0019012|Ga0496119_0019012_3800_4630
Length 276
Sequence VAAPGTGAPVPTTPDDVVRAAAAAPDLETLAAVSTTCRACPRLVAWREDQAAHPPARYRGQTYWARPAPGFGDPAARVVVVGLAPAAHGANRTGRMFTGDRSGDFLFAAMHRVGMASQPTSVAVDDGLTLHDVRVTAPVRCAPPANAPTPAERRTCGPWLARELELVAPRVAVVLGGFGWQALLTTLAEQGWTVPRPRPVFGHGVEVTLRHGTQDRALTLLGCYHVSQQNTFTGRLTPDMLDAVLARALLVAETAGIVVHPGNDPSAQPGALRSRT

Samples

Sample ID Description Type Environment
1 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
106 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
107 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
108 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
109 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
110 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
123 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
124 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
125 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
132 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
133 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
134 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
135 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
136 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
149 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
162 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
163 2643221721 Oerskovia sp. Root918 Isolate Unclassified
164 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
165 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
166 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
167 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
168 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
169 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
170 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
171 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
172 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
173 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
174 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
175 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
176 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
177 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
178 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
179 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
180 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
181 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.88
Metatranscriptomes 0.37
Isolates 7.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.48
Nodule 0
Rhizoplane 1.48
Rhizosphere 90.77
Stem 0
Stem Tuber 0
Unclassified 7.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496119_0019012 3300048922 Bacteria 5083
2 Ga0070683_100053808 3300005329 Bacteria 3731
3 Ga0070683_100085946 3300005329 Bacteria 2949
4 Ga0070683_101091465 3300005329 Bacteria 767
5 Ga0070690_100090255 3300005330 Bacteria 2017
6 Ga0068869_100605379 3300005334 Bacteria 926
7 Ga0068868_100007834 3300005338 Bacteria 7625
8 Ga0068868_100036399 3300005338 Bacteria 3810
9 Ga0068868_100072409 3300005338 Bacteria 2749
10 Ga0070660_100227160 3300005339 Bacteria 1518
11 Ga0070660_100371290 3300005339 Bacteria 1180
12 Ga0070660_100551053 3300005339 Bacteria 962
13 Ga0070692_10033588 3300005345 Bacteria 2585
14 Ga0070671_100196340 3300005355 Bacteria 1711
15 Ga0070667_100047119 3300005367 Unclassified 3627
16 Ga0070667_100145145 3300005367 Unclassified 2081
17 Ga0070714_100055083 3300005435 Bacteria 3399
18 Ga0070701_10248917 3300005438 Bacteria 1072
19 Ga0070708_100003846 3300005445 Bacteria 11783
20 Ga0070708_100345713 3300005445 Bacteria 1402
21 Ga0070708_100397952 3300005445 Bacteria 1299
22 Ga0070678_100599845 3300005456 Bacteria 983
23 Ga0070681_10110194 3300005458 Bacteria 2692
24 Ga0068867_100050535 3300005459 Bacteria 3065
25 Ga0068867_100194384 3300005459 Bacteria 1621
26 Ga0070685_10280724 3300005466 Bacteria 1115
27 Ga0070706_100041588 3300005467 Bacteria 4243
28 Ga0070706_100159674 3300005467 Bacteria 2105
29 Ga0070707_100009199 3300005468 Bacteria 9166
30 Ga0070707_100422682 3300005468 Bacteria 1293
31 Ga0070679_100220986 3300005530 Bacteria 1855
32 Ga0070684_100031895 3300005535 Bacteria 4488
33 Ga0070684_100266887 3300005535 Bacteria 1566
34 Ga0070684_100274266 3300005535 Bacteria 1544
35 Ga0070684_100460459 3300005535 Bacteria 1176
36 Ga0070697_100023588 3300005536 Bacteria 4892
37 Ga0070697_100055372 3300005536 Bacteria 3224
38 Ga0070697_100253641 3300005536 Bacteria 1505
39 Ga0068853_100402557 3300005539 Bacteria 1281
40 Ga0070693_100159938 3300005547 Unclassified 1434
41 Ga0070665_100089640 3300005548 Unclassified 3081
42 Ga0070665_100357382 3300005548 Bacteria 1466
43 Ga0068855_100003631 3300005563 Bacteria 18863
44 Ga0068855_100224429 3300005563 Bacteria 2105
45 Ga0070664_100303824 3300005564 Bacteria 1442
46 Ga0068857_100240129 3300005577 Bacteria 1659
47 Ga0068854_100025310 3300005578 Bacteria 4071
48 Ga0068856_100019864 3300005614 Bacteria 6522
49 Ga0068856_100135949 3300005614 Bacteria 2463
50 Ga0070702_100044154 3300005615 Bacteria 2515
51 Ga0068852_100222630 3300005616 Bacteria 1795
52 Ga0068859_100034213 3300005617 Bacteria 5101
53 Ga0068859_100230025 3300005617 Bacteria 1942
54 Ga0068864_100237389 3300005618 Unclassified 1688
55 Ga0068864_100533460 3300005618 Bacteria 1133
56 Ga0068861_100082545 3300005719 Bacteria 2519
57 Ga0068851_10057922 3300005834 Unclassified 1979
58 Ga0068863_100053284 3300005841 Bacteria 3834
59 Ga0068858_100005369 3300005842 Bacteria 12561
60 Ga0068858_100147947 3300005842 Unclassified 2207
61 Ga0068860_100067592 3300005843 Unclassified 3395
62 Ga0068860_100640006 3300005843 Bacteria 1071
63 Ga0081455_10000013 3300005937 Bacteria 196011
64 Ga0097621_100056481 3300006237 Unclassified 3207
65 Ga0097621_100340835 3300006237 Bacteria 1331
66 Ga0097621_100425243 3300006237 Bacteria 1193
67 Ga0068871_100011241 3300006358 Bacteria 6561
68 Ga0068871_100354741 3300006358 Bacteria 1298
69 Ga0068871_100357666 3300006358 Unclassified 1293
70 Ga0075431_100016276 3300006847 Bacteria 7545
71 Ga0068865_100011308 3300006881 Bacteria 5582
72 Ga0068865_100081911 3300006881 Bacteria 2319
73 Ga0097620_100034214 3300006931 Bacteria 5101
74 Ga0097620_100230033 3300006931 Bacteria 1942
75 Ga0099794_10011972 3300007265 Bacteria 3729
76 Ga0099794_10011999 3300007265 Bacteria 3726
77 Ga0105240_10013554 3300009093 Bacteria 11189
78 Ga0105240_10055406 3300009093 Unclassified 4964
79 Ga0105245_10009200 3300009098 Bacteria 8614
80 Ga0105245_10023491 3300009098 Bacteria 5412
81 Ga0105245_10030226 3300009098 Bacteria 4790
82 Ga0105245_10080274 3300009098 Unclassified 2980
83 Ga0105245_10282031 3300009098 Bacteria 1624
84 Ga0105245_10524921 3300009098 Bacteria 1203
85 Ga0105247_10249343 3300009101 Bacteria 1213
86 Ga0105243_10011427 3300009148 Bacteria 6719
87 Ga0105241_10044885 3300009174 Bacteria 3351
88 Ga0105241_10479493 3300009174 Bacteria 1105
89 Ga0105242_10039913 3300009176 Unclassified 3780
90 Ga0105242_10059238 3300009176 Bacteria 3141
91 Ga0105242_10087267 3300009176 Bacteria 2619
92 Ga0105242_10261021 3300009176 Bacteria 1565
93 Ga0105248_10003627 3300009177 Bacteria 17124
94 Ga0105248_10350652 3300009177 Bacteria 1662
95 Ga0105237_10110956 3300009545 Bacteria 2734
96 Ga0105238_10080009 3300009551 Bacteria 3257
97 Ga0105238_10082435 3300009551 Bacteria 3206
98 Ga0105238_10173973 3300009551 Bacteria 2129
99 Ga0105238_10498733 3300009551 Bacteria 1218
100 Ga0105249_10465407 3300009553 Bacteria 1305
101 Ga0105249_10544758 3300009553 Bacteria 1210
102 Ga0105239_10020692 3300010375 Bacteria 7259
103 Ga0105239_10050412 3300010375 Bacteria 4566
104 Ga0105239_10075196 3300010375 Bacteria 3713
105 Ga0105246_10093420 3300011119 Bacteria 2173
106 Ga0105246_10179739 3300011119 Bacteria 1628
107 Ga0105246_10321475 3300011119 Bacteria 1257
108 Ga0105246_10364195 3300011119 Bacteria 1189
109 Ga0157370_10020450 3300013104 Bacteria 6612
110 Ga0157370_10059648 3300013104 Bacteria 3625
111 Ga0157370_10410071 3300013104 Bacteria 1247
112 Ga0157369_10215982 3300013105 Bacteria 2009
113 Ga0157374_10100458 3300013296 Bacteria 2773
114 Ga0157374_10130579 3300013296 Bacteria 2431
115 Ga0157378_10094338 3300013297 Bacteria 2725
116 Ga0157378_10348972 3300013297 Bacteria 1445
117 Ga0163162_10082387 3300013306 Bacteria 3289
118 Ga0157372_10297857 3300013307 Bacteria 1876
119 Ga0157375_11197270 3300013308 Bacteria 891
120 Ga0163163_10003336 3300014325 Bacteria 13621
121 Ga0163163_10088948 3300014325 Bacteria 3100
122 Ga0163163_10090961 3300014325 Unclassified 3065
123 Ga0163163_11184070 3300014325 Bacteria 827
124 Ga0157380_10972375 3300014326 Bacteria 880
125 Ga0157377_10007106 3300014745 Bacteria 5384
126 Ga0157379_10028591 3300014968 Unclassified 4958
127 Ga0157376_10406594 3300014969 Bacteria 1318
128 Ga0157376_10469907 3300014969 Bacteria 1230
129 Ga0163161_10262094 3300017792 Bacteria 1350
130 Ga0163161_10363856 3300017792 Bacteria 1153
131 Ga0207684_10190750 3300025910 Bacteria 1768
132 Ga0207684_10250079 3300025910 Bacteria 1529
133 Ga0207654_10032798 3300025911 Bacteria 2873
134 Ga0207654_10056883 3300025911 Bacteria 2271
135 Ga0207695_10076577 3300025913 Bacteria 3400
136 Ga0207695_10134817 3300025913 Bacteria 2423
137 Ga0207671_10060570 3300025914 Bacteria 2808
138 Ga0207657_10241397 3300025919 Bacteria 1442
139 Ga0207657_10490375 3300025919 Bacteria 963
140 Ga0207657_10511463 3300025919 Bacteria 940
141 Ga0207646_10009924 3300025922 Bacteria 9364
142 Ga0207694_10016873 3300025924 Bacteria 5516
143 Ga0207694_10030498 3300025924 Bacteria 4119
144 Ga0207694_10108007 3300025924 Bacteria 2211
145 Ga0207687_10008107 3300025927 Bacteria 6875
146 Ga0207687_10008731 3300025927 Bacteria 6621
147 Ga0207687_10115751 3300025927 Bacteria 1998
148 Ga0207687_10136800 3300025927 Bacteria 1854
149 Ga0207644_10462441 3300025931 Bacteria 1043
150 Ga0207686_10013394 3300025934 Bacteria 4537
151 Ga0207686_10453781 3300025934 Bacteria 987
152 Ga0207670_10759213 3300025936 Bacteria 806
153 Ga0207704_10008029 3300025938 Bacteria 5021
154 Ga0207691_10182892 3300025940 Bacteria 1831
155 Ga0207711_10060416 3300025941 Bacteria 3266
156 Ga0207711_10239916 3300025941 Bacteria 1662
157 Ga0207711_10267131 3300025941 Bacteria 1573
158 Ga0207661_10273030 3300025944 Bacteria 1509
159 Ga0207679_10023903 3300025945 Bacteria 4185
160 Ga0207667_10627862 3300025949 Unclassified 1081
161 Ga0207712_10096714 3300025961 Bacteria 2186
162 Ga0207640_10125527 3300025981 Bacteria 1847
163 Ga0207658_10026024 3300025986 Unclassified 4099
164 Ga0207677_10012846 3300026023 Bacteria 4833
165 Ga0207677_10031774 3300026023 Unclassified 3384
166 Ga0207703_10003281 3300026035 Bacteria 13574
167 Ga0207703_10110091 3300026035 Bacteria 2349
168 Ga0207639_10014461 3300026041 Bacteria 5552
169 Ga0207639_10276680 3300026041 Bacteria 1475
170 Ga0207708_10016711 3300026075 Bacteria 5522
171 Ga0207702_10014872 3300026078 Bacteria 6456
172 Ga0207702_10113088 3300026078 Bacteria 2417
173 Ga0207641_10044162 3300026088 Bacteria 3747
174 Ga0207648_10244653 3300026089 Bacteria 1598
175 Ga0207648_10479722 3300026089 Bacteria 1136
176 Ga0207676_10023406 3300026095 Bacteria 4557
177 Ga0207676_10199929 3300026095 Bacteria 1765
178 Ga0207674_10265957 3300026116 Bacteria 1662
179 Ga0207675_100061084 3300026118 Bacteria 3518
180 Ga0207683_10099459 3300026121 Bacteria 2596
181 Ga0209588_1001982 3300027671 Bacteria 5498
182 Ga0209588_1003599 3300027671 Bacteria 4301
183 Ga0268266_10028261 3300028379 Unclassified 4767
184 Ga0268264_10007969 3300028381 Bacteria 8815
185 Ga0268264_11002051 3300028381 Bacteria 842
186 Ga0265326_10001708 3300028558 Bacteria 7605
187 Ga0265334_10010513 3300028573 Bacteria 3907
188 Ga0265322_10004389 3300028654 Bacteria 4204
189 Ga0265320_10023832 3300031240 Bacteria 3249
190 Ga0265320_10046188 3300031240 Bacteria 2136
191 Ga0265325_10054624 3300031241 Bacteria 2044
192 Ga0265339_10229659 3300031249 Bacteria 905
193 Ga0265327_10144705 3300031251 Bacteria 1108
194 Ga0265314_10024624 3300031711 Bacteria 4560
195 Ga0316576_10013087 3300031727 Bacteria 5503
196 Ga0307414_10433748 3300032004 Bacteria 1149
197 Ga0316214_1000556 3300033545 Bacteria 3883
198 Ga0373935_0094536 3300035692 Bacteria 1962
199 Ga0373927_0007869 3300035695 Bacteria 7209
200 Ga0373937_0054141 3300036401 Unclassified 3681
201 Ga0372808_000230 3300036459 Bacteria 3679
202 Ga0373925_0203178 3300037068 Bacteria 1576
203 Ga0395899_0173721 3300037312 Bacteria 1516
204 Ga0400483_072032 3300039062 Bacteria 5823
205 Ga0400483_217102 3300039062 Bacteria 3738
206 Ga0439465_0034261 3300041413 Bacteria 1625
207 Ga0451853_3654287 3300041512 Bacteria 849
208 Ga0439449_0008335 3300042007 Bacteria 3943
209 Ga0466969_0018742 3300044656 Bacteria 3603
210 Ga0466960_0002997 3300044901 Bacteria 6440
211 Ga0466959_0022192 3300045049 Bacteria 4690
212 Ga0451576_1170017 3300045051 Bacteria 804
213 Ga0466967_0087664 3300045976 Bacteria 2822
214 Ga0495641_0262057 3300046461 Bacteria 778
215 Ga0495582_0012386 3300046473 Bacteria 4698
216 Ga0495662_0297779 3300046476 Bacteria 794
217 Ga0495666_0065713 3300046526 Bacteria 1730
218 Ga0495665_0168061 3300046531 Unclassified 1142
219 Ga0495593_0099783 3300047673 Bacteria 1490
220 Ga0496104_0419664 3300048907 Bacteria 1250
221 Ga0496108_0144267 3300048911 Bacteria 2052
222 Ga0496114_0373400 3300048917 Bacteria 1262
223 Ga0496122_0000371 3300048925 Bacteria 96407
224 Ga0496125_0000074 3300048928 Bacteria 235549
225 Ga0496126_0067140 3300048929 Bacteria 3205
226 Ga0501034_0041331 3300049571 Bacteria 4665
227 Ga0501034_0347479 3300049571 Bacteria 1412
228 Ga0501036_0061300 3300049572 Bacteria 3186
229 Ga0501038_0001253 3300049574 Bacteria 23031
230 Ga0501039_0448081 3300049575 Bacteria 1014
231 Ga0501048_0423188 3300049582 Bacteria 953
232 Ga0501067_0031268 3300049583 Bacteria 2954
233 Ga0501067_0081845 3300049583 Bacteria 1790
234 Ga0501067_0308158 3300049583 Bacteria 882
235 Ga0501068_0186156 3300049584 Bacteria 1314
236 Ga0501068_0197292 3300049584 Bacteria 1276
237 Ga0501071_0078679 3300049587 Bacteria 2410
238 Ga0501075_0010140 3300049591 Bacteria 6612
239 Ga0501076_0083961 3300049592 Bacteria 2558
240 Ga0501035_0029299 3300049822 Bacteria 5020
241 Ga0501044_0018189 3300049823 Bacteria 7539
242 Ga0501044_0067284 3300049823 Bacteria 3650
243 nmdc:mga00v17_17116_c1 3300050491 Bacteria 4095
244 nmdc:mga00v17_314622_c1 3300050491 Bacteria 1017
245 nmdc:mga0qj67_465536_c1 3300050509 Bacteria 1018
246 nmdc:mga06r32_232550_c1 3300050510 Bacteria 1831
247 Ga0495601_0000380 3300053077 Bacteria 23464
248 Ga0500568_0000045 3300053139 Bacteria 125714
249 Ga0500568_0008041 3300053139 Bacteria 5119
250 Ga0501082_0193141 3300060353 Bacteria 1771
251 2644504514 2643221690 Bacteria 4654705
252 2644524012 2643221694 Bacteria 4392972
253 2644666894 2643221721 Bacteria 4486924
254 2644668109 2643221722 Bacteria 4247614
255 2676474115 2675903058 Bacteria 6822861
256 2793980242 2791355406 Bacteria 11364898
257 2795795329 2795385472 Bacteria 6627535
258 2812362952 2811994880 Bacteria 4147780
259 2839986265 2839986021 Bacteria 3685650
260 2863069079 2863067949 Bacteria 8541735
261 2884997328 2884994152 Bacteria 4492978
262 2891328102 2891326441 Bacteria 6439512
263 2932432756 2932431166 Bacteria 4215299
264 2935894402 2935890801 Bacteria 4593001
265 2956939943 2956939328 Bacteria 3474458
266 3001121362 3001119090 Bacteria 3449530
267 8047894117 8047893842 Bacteria 11723082
268 8048130146 8048127548 Bacteria 11053136
269 8048365137 8048356638 Bacteria 11044339
270 8048371134 8048369669 Bacteria 11666822
271 8048379935 8048379754 Bacteria 11877923
272 Ga0496119_0019012
273 Ga0070683_100053808
274 Ga0070683_100085946
275 Ga0070683_101091465
276 Ga0070690_100090255
277 Ga0068869_100605379
278 Ga0068868_100007834
279 Ga0068868_100036399
280 Ga0068868_100072409
281 Ga0070660_100227160
282 Ga0070660_100371290
283 Ga0070660_100551053
284 Ga0070692_10033588
285 Ga0070671_100196340
286 Ga0070667_100047119
287 Ga0070667_100145145
288 Ga0070714_100055083
289 Ga0070701_10248917
290 Ga0070708_100003846
291 Ga0070708_100345713
292 Ga0070708_100397952
293 Ga0070678_100599845
294 Ga0070681_10110194
295 Ga0068867_100050535
296 Ga0068867_100194384
297 Ga0070685_10280724
298 Ga0070706_100041588
299 Ga0070706_100159674
300 Ga0070707_100009199
301 Ga0070707_100422682
302 Ga0070679_100220986
303 Ga0070684_100031895
304 Ga0070684_100266887
305 Ga0070684_100274266
306 Ga0070684_100460459
307 Ga0070697_100023588
308 Ga0070697_100055372
309 Ga0070697_100253641
310 Ga0068853_100402557
311 Ga0070693_100159938
312 Ga0070665_100089640
313 Ga0070665_100357382
314 Ga0068855_100003631
315 Ga0068855_100224429
316 Ga0070664_100303824
317 Ga0068857_100240129
318 Ga0068854_100025310
319 Ga0068856_100019864
320 Ga0068856_100135949
321 Ga0070702_100044154
322 Ga0068852_100222630
323 Ga0068859_100034213
324 Ga0068859_100230025
325 Ga0068864_100237389
326 Ga0068864_100533460
327 Ga0068861_100082545
328 Ga0068851_10057922
329 Ga0068863_100053284
330 Ga0068858_100005369
331 Ga0068858_100147947
332 Ga0068860_100067592
333 Ga0068860_100640006
334 Ga0081455_10000013
335 Ga0097621_100056481
336 Ga0097621_100340835
337 Ga0097621_100425243
338 Ga0068871_100011241
339 Ga0068871_100354741
340 Ga0068871_100357666
341 Ga0075431_100016276
342 Ga0068865_100011308
343 Ga0068865_100081911
344 Ga0097620_100034214
345 Ga0097620_100230033
346 Ga0099794_10011972
347 Ga0099794_10011999
348 Ga0105240_10013554
349 Ga0105240_10055406
350 Ga0105245_10009200
351 Ga0105245_10023491
352 Ga0105245_10030226
353 Ga0105245_10080274
354 Ga0105245_10282031
355 Ga0105245_10524921
356 Ga0105247_10249343
357 Ga0105243_10011427
358 Ga0105241_10044885
359 Ga0105241_10479493
360 Ga0105242_10039913
361 Ga0105242_10059238
362 Ga0105242_10087267
363 Ga0105242_10261021
364 Ga0105248_10003627
365 Ga0105248_10350652
366 Ga0105237_10110956
367 Ga0105238_10080009
368 Ga0105238_10082435
369 Ga0105238_10173973
370 Ga0105238_10498733
371 Ga0105249_10465407
372 Ga0105249_10544758
373 Ga0105239_10020692
374 Ga0105239_10050412
375 Ga0105239_10075196
376 Ga0105246_10093420
377 Ga0105246_10179739
378 Ga0105246_10321475
379 Ga0105246_10364195
380 Ga0157370_10020450
381 Ga0157370_10059648
382 Ga0157370_10410071
383 Ga0157369_10215982
384 Ga0157374_10100458
385 Ga0157374_10130579
386 Ga0157378_10094338
387 Ga0157378_10348972
388 Ga0163162_10082387
389 Ga0157372_10297857
390 Ga0157375_11197270
391 Ga0163163_10003336
392 Ga0163163_10088948
393 Ga0163163_10090961
394 Ga0163163_11184070
395 Ga0157380_10972375
396 Ga0157377_10007106
397 Ga0157379_10028591
398 Ga0157376_10406594
399 Ga0157376_10469907
400 Ga0163161_10262094
401 Ga0163161_10363856
402 Ga0207684_10190750
403 Ga0207684_10250079
404 Ga0207654_10032798
405 Ga0207654_10056883
406 Ga0207695_10076577
407 Ga0207695_10134817
408 Ga0207671_10060570
409 Ga0207657_10241397
410 Ga0207657_10490375
411 Ga0207657_10511463
412 Ga0207646_10009924
413 Ga0207694_10016873
414 Ga0207694_10030498
415 Ga0207694_10108007
416 Ga0207687_10008107
417 Ga0207687_10008731
418 Ga0207687_10115751
419 Ga0207687_10136800
420 Ga0207644_10462441
421 Ga0207686_10013394
422 Ga0207686_10453781
423 Ga0207670_10759213
424 Ga0207704_10008029
425 Ga0207691_10182892
426 Ga0207711_10060416
427 Ga0207711_10239916
428 Ga0207711_10267131
429 Ga0207661_10273030
430 Ga0207679_10023903
431 Ga0207667_10627862
432 Ga0207712_10096714
433 Ga0207640_10125527
434 Ga0207658_10026024
435 Ga0207677_10012846
436 Ga0207677_10031774
437 Ga0207703_10003281
438 Ga0207703_10110091
439 Ga0207639_10014461
440 Ga0207639_10276680
441 Ga0207708_10016711
442 Ga0207702_10014872
443 Ga0207702_10113088
444 Ga0207641_10044162
445 Ga0207648_10244653
446 Ga0207648_10479722
447 Ga0207676_10023406
448 Ga0207676_10199929
449 Ga0207674_10265957
450 Ga0207675_100061084
451 Ga0207683_10099459
452 Ga0209588_1001982
453 Ga0209588_1003599
454 Ga0268266_10028261
455 Ga0268264_10007969
456 Ga0268264_11002051
457 Ga0265326_10001708
458 Ga0265334_10010513
459 Ga0265322_10004389
460 Ga0265320_10023832
461 Ga0265320_10046188
462 Ga0265325_10054624
463 Ga0265339_10229659
464 Ga0265327_10144705
465 Ga0265314_10024624
466 Ga0316576_10013087
467 Ga0307414_10433748
468 Ga0316214_1000556
469 Ga0373935_0094536
470 Ga0373927_0007869
471 Ga0373937_0054141
472 Ga0372808_000230
473 Ga0373925_0203178
474 Ga0395899_0173721
475 Ga0400483_072032
476 Ga0400483_217102
477 Ga0439465_0034261
478 Ga0451853_3654287
479 Ga0439449_0008335
480 Ga0466969_0018742
481 Ga0466960_0002997
482 Ga0466959_0022192
483 Ga0451576_1170017
484 Ga0466967_0087664
485 Ga0495641_0262057
486 Ga0495582_0012386
487 Ga0495662_0297779
488 Ga0495666_0065713
489 Ga0495665_0168061
490 Ga0495593_0099783
491 Ga0496104_0419664
492 Ga0496108_0144267
493 Ga0496114_0373400
494 Ga0496122_0000371
495 Ga0496125_0000074
496 Ga0496126_0067140
497 Ga0501034_0041331
498 Ga0501034_0347479
499 Ga0501036_0061300
500 Ga0501038_0001253
501 Ga0501039_0448081
502 Ga0501048_0423188
503 Ga0501067_0031268
504 Ga0501067_0081845
505 Ga0501067_0308158
506 Ga0501068_0186156
507 Ga0501068_0197292
508 Ga0501071_0078679
509 Ga0501075_0010140
510 Ga0501076_0083961
511 Ga0501035_0029299
512 Ga0501044_0018189
513 Ga0501044_0067284
514 nmdc:mga00v17_17116_c1
515 nmdc:mga00v17_314622_c1
516 nmdc:mga0qj67_465536_c1
517 nmdc:mga06r32_232550_c1
518 Ga0495601_0000380
519 Ga0500568_0000045
520 Ga0500568_0008041
521 Ga0501082_0193141
522 2644504514
523 2644524012
524 2644666894
525 2644668109
526 2676474115
527 2793980242
528 2795795329
529 2812362952
530 2839986265
531 2863069079
532 2884997328
533 2891328102
534 2932432756
535 2935894402
536 2956939943
537 3001121362
538 8047894117
539 8048130146
540 8048365137
541 8048371134
542 8048379935

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

69

249

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.8812 21 243
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.8736 21 243
4zbz-assembly1.cif.gz_A family 4 uracil-dna glycosylase from sulfolobus tokodaii (free form, x-ray wavelength=1.5418) 0.7853 21 235
1ui1-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase from thermus thermophilus hb8 0.7844 21 243
1vk2-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase (tm0511) from thermotoga maritima at 1.90 a resolution 0.7769 22 240
ID Description Score Start End Superfamily
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9103 23 243 3.40.470.10
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9025 23 243 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.889 21 243 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8812 21 243 3.40.470.10
4zbzA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7852 21 235 3.40.470.10
ID Description Score Start End GO Terms
AF-A0A8A9AKY3-F1-model_v4 deleted 0.9502 21 245
AF-A0A4R2JI92-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9495 21 240 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-A0A1I5G4P5-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9485 22 245 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-A0A2S8MH94-F1-model_v4 deleted 0.9477 12 180
AF-A0A399HC02-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9476 11 247 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539

Map