F377922

General Info

Members Datasets Scaffolds Average Seq Length
271 185 542 226

Family's Representative Sequence

Representative Sequence 3300048915|Ga0496112_0355118|Ga0496112_0355118_446_1198
Length 250
Sequence LLARTYHYLPTIPEESTMLTQTAIRVTPSSSRSPRAAGREQLEATESNNPLLESMHLMGAVLSYKRNAEIFGEDEPAEYIYTVLSGSVRTYKILSDGRRQICGFYLPGDVFGLQFNEEHIFSAEAITDAKILVVKRSALTALADRDAAVGRELFALTARELRRMHERILLLVKSAQERVASFLVEMSERAAAGNAIELPMTRQDIADYLGLTIETVSRTLTSLESCAAIEVATSRHIVLRNRSALNRMNG

Samples

Sample ID Description Type Environment
1 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
100 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
101 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
102 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
103 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
104 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
127 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
128 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
129 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
130 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
166 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
167 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
168 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
172 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
176 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
177 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
178 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
179 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
180 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
181 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
182 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
183 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.86
Nodule 0
Rhizoplane 4.06
Rhizosphere 86.72
Stem 0
Stem Tuber 0
Unclassified 9.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496112_0355118 3300048915 Bacteria 1408
2 Ga0065715_10120702 3300005293 Bacteria 2243
3 Ga0068869_100460360 3300005334 Bacteria 1056
4 Ga0070680_100180009 3300005336 Bacteria 1780
5 Ga0070660_100733346 3300005339 Bacteria 829
6 Ga0070668_100324817 3300005347 Unclassified 1296
7 Ga0070669_100120369 3300005353 Bacteria 2002
8 Ga0070674_100486248 3300005356 Bacteria 1025
9 Ga0070709_10164212 3300005434 Bacteria 1546
10 Ga0070714_100225440 3300005435 Bacteria 1725
11 Ga0070714_100255190 3300005435 Bacteria 1622
12 Ga0070713_100024739 3300005436 Bacteria 4684
13 Ga0070713_100179625 3300005436 Bacteria 1901
14 Ga0070713_100743335 3300005436 Unclassified 938
15 Ga0070710_10113816 3300005437 Bacteria 1628
16 Ga0070711_100611079 3300005439 Bacteria 910
17 Ga0070662_100009002 3300005457 Bacteria 6514
18 Ga0070681_10860744 3300005458 Unclassified 824
19 Ga0070698_100298681 3300005471 Bacteria 1541
20 Ga0070684_100069237 3300005535 Bacteria 3103
21 Ga0070684_100736676 3300005535 Unclassified 920
22 Ga0070672_100326339 3300005543 Bacteria 1305
23 Ga0070665_100174562 3300005548 Bacteria 2150
24 Ga0068855_100184250 3300005563 Bacteria 2359
25 Ga0068864_100847026 3300005618 Bacteria 901
26 Ga0068858_100374572 3300005842 Bacteria 1366
27 Ga0068862_100278487 3300005844 Bacteria 1532
28 Ga0081455_10029411 3300005937 Bacteria 5009
29 Ga0070717_10089071 3300006028 Bacteria 2602
30 Ga0070717_10592266 3300006028 Bacteria 1006
31 Ga0075365_10355654 3300006038 Bacteria 1032
32 Ga0075368_10046368 3300006042 Bacteria 1719
33 Ga0075364_10215008 3300006051 Bacteria 1304
34 Ga0070716_100283978 3300006173 Bacteria 1143
35 Ga0070712_100204945 3300006175 Unclassified 1552
36 Ga0075362_10036311 3300006177 Bacteria 2155
37 Ga0075362_10044477 3300006177 Bacteria 1970
38 Ga0075367_10273518 3300006178 Bacteria 1061
39 Ga0075367_10410544 3300006178 Bacteria 857
40 Ga0075369_10031145 3300006186 Bacteria 2249
41 Ga0075369_10092854 3300006186 Bacteria 1348
42 Ga0075366_10129976 3300006195 Unclassified 1519
43 Ga0075428_100001655 3300006844 Bacteria 23712
44 Ga0075430_100131004 3300006846 Bacteria 2090
45 Ga0075431_100000499 3300006847 Bacteria 32706
46 Ga0075431_100509932 3300006847 Unclassified 1193
47 Ga0075433_10134943 3300006852 Bacteria 2194
48 Ga0075434_100116043 3300006871 Bacteria 2690
49 Ga0075434_100344655 3300006871 Bacteria 1511
50 Ga0075429_100087490 3300006880 Bacteria 2715
51 Ga0075435_100084028 3300007076 Bacteria 2618
52 Ga0075435_100460649 3300007076 Bacteria 1097
53 Ga0111539_10001595 3300009094 Bacteria 30229
54 Ga0114129_10000066 3300009147 Bacteria 93802
55 Ga0114129_10028547 3300009147 Bacteria 7906
56 Ga0105241_10041936 3300009174 Bacteria 3460
57 Ga0105238_10089167 3300009551 Bacteria 3071
58 Ga0157371_10060274 3300013102 Bacteria 2691
59 Ga0157369_10166269 3300013105 Bacteria 2326
60 Ga0157378_10399977 3300013297 Bacteria 1353
61 Ga0157372_10077323 3300013307 Bacteria 3758
62 Ga0163163_10367614 3300014325 Bacteria 1495
63 Ga0157379_10653906 3300014968 Bacteria 984
64 Ga0157376_10150489 3300014969 Bacteria 2098
65 Ga0163161_10099455 3300017792 Unclassified 2163
66 Ga0228598_1000519 3300024227 Bacteria 8011
67 Ga0228598_1012790 3300024227 Bacteria 1666
68 Ga0228598_1015255 3300024227 Bacteria 1518
69 Ga0207692_10170591 3300025898 Bacteria 1261
70 Ga0207699_10125159 3300025906 Bacteria 1668
71 Ga0207699_10174836 3300025906 Bacteria 1439
72 Ga0207699_10232768 3300025906 Bacteria 1262
73 Ga0207699_10308624 3300025906 Bacteria 1107
74 Ga0207707_10724148 3300025912 Unclassified 834
75 Ga0207671_10190468 3300025914 Bacteria 1599
76 Ga0207693_10010311 3300025915 Bacteria 7585
77 Ga0207693_10304068 3300025915 Unclassified 1249
78 Ga0207663_10152663 3300025916 Bacteria 1622
79 Ga0207663_10710881 3300025916 Bacteria 796
80 Ga0207660_10128819 3300025917 Bacteria 1924
81 Ga0207657_10374303 3300025919 Bacteria 1122
82 Ga0207681_10288866 3300025923 Bacteria 1294
83 Ga0207687_10153911 3300025927 Bacteria 1757
84 Ga0207700_10156006 3300025928 Bacteria 1891
85 Ga0207664_10033708 3300025929 Bacteria 3937
86 Ga0207664_10307458 3300025929 Bacteria 1396
87 Ga0207706_10014123 3300025933 Bacteria 7241
88 Ga0207706_10514527 3300025933 Bacteria 1032
89 Ga0207670_10526746 3300025936 Bacteria 963
90 Ga0207669_10415918 3300025937 Bacteria 1057
91 Ga0207691_10410286 3300025940 Bacteria 1155
92 Ga0207689_10110522 3300025942 Bacteria 2259
93 Ga0207658_10545448 3300025986 Unclassified 1037
94 Ga0207703_10339707 3300026035 Bacteria 1380
95 Ga0207675_100763154 3300026118 Bacteria 979
96 Ga0207428_10038074 3300027907 Bacteria 3912
97 Ga0268265_10060887 3300028380 Bacteria 2895
98 Ga0268265_10344827 3300028380 Bacteria 1358
99 Ga0265760_10075270 3300031090 Bacteria 1040
100 Ga0265325_10024452 3300031241 Bacteria 3286
101 Ga0265339_10000900 3300031249 Bacteria 22829
102 Ga0307513_10138608 3300031456 Bacteria 2363
103 Ga0265313_10000171 3300031595 Bacteria 68612
104 Ga0265314_10139478 3300031711 Bacteria 1501
105 Ga0373944_0006853 3300035089 Bacteria 3038
106 Ga0373936_0016717 3300035113 Bacteria 2823
107 Ga0373953_0041704 3300035117 Bacteria 1827
108 Ga0373954_0054428 3300035118 Bacteria 1882
109 Ga0373956_0025573 3300035119 Bacteria 2553
110 Ga0373956_0122512 3300035119 Bacteria 1215
111 Ga0373943_0002094 3300035170 Bacteria 9061
112 Ga0373943_0337891 3300035170 Bacteria 861
113 Ga0373946_0010314 3300035171 Bacteria 3454
114 Ga0373955_0075337 3300035172 Bacteria 1896
115 Ga0373924_0030088 3300035410 Bacteria 2174
116 Ga0373931_0195649 3300035691 Bacteria 1205
117 Ga0373935_0071997 3300035692 Bacteria 2231
118 Ga0373935_0368649 3300035692 Bacteria 1027
119 Ga0373927_0001380 3300035695 Bacteria 18300
120 Ga0373927_0031559 3300035695 Bacteria 3452
121 Ga0373927_0509501 3300035695 Bacteria 795
122 Ga0373933_0016650 3300035724 Bacteria 4115
123 Ga0373933_0059156 3300035724 Bacteria 2307
124 Ga0373933_0087556 3300035724 Bacteria 1918
125 Ga0373933_0223775 3300035724 Bacteria 1208
126 Ga0373947_0001198 3300035725 Bacteria 15944
127 Ga0373947_0111272 3300035725 Unclassified 1731
128 Ga0373947_0623873 3300035725 Bacteria 735
129 Ga0373937_0017818 3300036401 Bacteria 6337
130 Ga0373937_0037096 3300036401 Bacteria 4442
131 Ga0373937_0221170 3300036401 Bacteria 1782
132 Ga0373937_0533389 3300036401 Bacteria 1115
133 Ga0373937_0848450 3300036401 Bacteria 862
134 Ga0373925_0019162 3300037068 Bacteria 4975
135 Ga0373925_0129256 3300037068 Bacteria 1968
136 Ga0373925_0152552 3300037068 Bacteria 1815
137 Ga0373925_0341178 3300037068 Bacteria 1215
138 Ga0373925_0411677 3300037068 Bacteria 1104
139 Ga0439453_0012647 3300041408 Bacteria 1424
140 Ga0439453_0073910 3300041408 Bacteria 725
141 Ga0439443_001872 3300042003 Bacteria 2423
142 Ga0439444_0032113 3300042437 Bacteria 991
143 Ga0439464_0019707 3300042439 Bacteria 1843
144 Ga0439440_0006080 3300042993 Bacteria 2419
145 Ga0495592_0027551 3300046454 Bacteria 4308
146 Ga0495592_0034092 3300046454 Bacteria 3839
147 Ga0495603_0279250 3300046455 Bacteria 960
148 Ga0495629_0095735 3300046459 Bacteria 2071
149 Ga0495629_0453466 3300046459 Unclassified 868
150 Ga0495638_0010146 3300046460 Bacteria 6560
151 Ga0495651_0032562 3300046462 Bacteria 4065
152 Ga0495651_0204680 3300046462 Bacteria 1378
153 Ga0495653_0060759 3300046463 Bacteria 2862
154 Ga0495664_0197069 3300046477 Bacteria 1221
155 Ga0495594_0179329 3300046499 Unclassified 1206
156 Ga0495608_0172642 3300046511 Bacteria 1370
157 Ga0495608_0267181 3300046511 Bacteria 1064
158 Ga0495618_0230037 3300046514 Unclassified 1167
159 Ga0495618_0239490 3300046514 Bacteria 1141
160 Ga0495628_0066573 3300046516 Bacteria 2816
161 Ga0495628_0103672 3300046516 Bacteria 2193
162 Ga0495628_0459845 3300046516 Bacteria 923
163 Ga0495630_0148780 3300046517 Unclassified 1781
164 Ga0495630_0181497 3300046517 Bacteria 1605
165 Ga0495666_0029769 3300046526 Bacteria 2686
166 Ga0495652_0071579 3300046529 Bacteria 2893
167 Ga0495652_0215252 3300046529 Bacteria 1447
168 Ga0495665_0160293 3300046531 Bacteria 1173
169 Ga0495640_0049017 3300046533 Bacteria 2915
170 Ga0495640_0084423 3300046533 Bacteria 2106
171 Ga0495587_0039946 3300046536 Bacteria 2806
172 Ga0495587_0095652 3300046536 Bacteria 1714
173 Ga0495587_0147306 3300046536 Bacteria 1342
174 Ga0495645_0366342 3300046543 Bacteria 925
175 Ga0495667_0153016 3300046559 Unclassified 1485
176 Ga0495667_0264842 3300046559 Bacteria 1093
177 Ga0495634_0270442 3300046642 Unclassified 1034
178 Ga0495634_0383812 3300046642 Bacteria 837
179 Ga0495657_0266886 3300046675 Bacteria 1027
180 Ga0495623_0024671 3300046679 Bacteria 3871
181 Ga0495623_0044043 3300046679 Bacteria 2837
182 Ga0495646_0339495 3300046680 Bacteria 788
183 Ga0495647_0397130 3300046681 Bacteria 633
184 Ga0495658_0082152 3300046683 Bacteria 1893
185 Ga0495658_0333158 3300046683 Bacteria 963
186 Ga0495613_0056694 3300046689 Unclassified 2877
187 Ga0495613_0121717 3300046689 Bacteria 1873
188 Ga0495613_0154173 3300046689 Bacteria 1637
189 Ga0495624_0005221 3300046690 Bacteria 9387
190 Ga0495600_0097626 3300046809 Bacteria 1915
191 Ga0495581_0002788 3300047315 Bacteria 9967
192 Ga0495581_0087181 3300047315 Bacteria 1810
193 Ga0495581_0256293 3300047315 Bacteria 1023
194 Ga0495604_0497261 3300047317 Unclassified 791
195 Ga0495674_0060946 3300047319 Bacteria 3290
196 Ga0495674_0253083 3300047319 Bacteria 1449
197 Ga0495676_0089255 3300047321 Bacteria 2310
198 Ga0495680_0088842 3300047322 Bacteria 2321
199 Ga0495680_0099589 3300047322 Bacteria 2167
200 Ga0495680_0427472 3300047322 Bacteria 910
201 Ga0495684_0004082 3300047471 Bacteria 11400
202 Ga0495684_0106884 3300047471 Bacteria 2114
203 Ga0495684_0300058 3300047471 Bacteria 1154
204 Ga0495602_0021444 3300048088 Bacteria 6359
205 Ga0496102_0568782 3300048905 Bacteria 1056
206 Ga0496104_0000410 3300048907 Bacteria 37646
207 Ga0496104_0057689 3300048907 Bacteria 3674
208 Ga0496105_0004253 3300048908 Bacteria 10769
209 Ga0496105_0059442 3300048908 Bacteria 3154
210 Ga0496106_0430422 3300048909 Bacteria 1060
211 Ga0496109_0202355 3300048912 Bacteria 1867
212 Ga0496111_0330239 3300048914 Bacteria 1129
213 Ga0496115_0057367 3300048918 Bacteria 3132
214 Ga0496115_0529696 3300048918 Unclassified 944
215 Ga0501033_0725989 3300049570 Bacteria 675
216 Ga0501034_0437056 3300049571 Bacteria 1228
217 Ga0501036_0224553 3300049572 Bacteria 1577
218 Ga0501038_0497959 3300049574 Bacteria 932
219 Ga0501039_0161407 3300049575 Unclassified 1762
220 Ga0501040_0076516 3300049576 Unclassified 2314
221 Ga0501040_0154929 3300049576 Bacteria 1618
222 Ga0501041_0047729 3300049577 Plasmid 2607
223 Ga0501042_0299591 3300049578 Bacteria 1162
224 Ga0501047_0058507 3300049581 Bacteria 3723
225 Ga0501047_0574248 3300049581 Bacteria 951
226 Ga0501070_0161855 3300049586 Bacteria 1845
227 Ga0501072_0089816 3300049588 Unclassified 2439
228 Ga0501075_0009091 3300049591 Bacteria 6940
229 Ga0501075_0080125 3300049591 Bacteria 2472
230 Ga0501075_0082774 3300049591 Bacteria 2431
231 Ga0501077_0014536 3300049593 Plasmid 4948
232 Ga0501079_0127802 3300049741 Bacteria 1977
233 Ga0501080_0089886 3300049742 Unclassified 2853
234 Ga0501081_0476884 3300049743 Unclassified 928
235 Ga0501083_0109494 3300049744 Bacteria 1817
236 Ga0501044_0051839 3300049823 Bacteria 4231
237 Ga0501045_0162077 3300049824 Bacteria 1665
238 nmdc:mga03683_126668_c1 3300050489 Bacteria 1140
239 nmdc:mga03683_83011_c1 3300050489 Bacteria 1387
240 nmdc:mga0k408_108632_c1 3300050493 Bacteria 1639
241 nmdc:mga06z11_232606_c1 3300050494 Bacteria 1080
242 nmdc:mga07m45_12111_c1 3300050496 Bacteria 4552
243 nmdc:mga07m45_212380_c1 3300050496 Bacteria 1126
244 nmdc:mga05p37_19716_c1 3300050507 Bacteria 8159
245 nmdc:mga05p37_681_c1 3300050507 Bacteria 37660
246 nmdc:mga0qj67_149304_c1 3300050509 Bacteria 1896
247 nmdc:mga06r32_119792_c1 3300050510 Bacteria 2595
248 nmdc:mga06r32_382875_c1 3300050510 Bacteria 1389
249 nmdc:mga06r32_394_c1 3300050510 Bacteria 36886
250 nmdc:mga06r32_817001_c1 3300050510 Bacteria 892
251 nmdc:mga08y16_191798_c1 3300050511 Bacteria 2119
252 nmdc:mga08y16_9178_c1 3300050511 Bacteria 10382
253 nmdc:mga0n895_12772_c1 3300050512 Bacteria 7542
254 nmdc:mga0n895_342508_c1 3300050512 Bacteria 1514
255 nmdc:mga0rr50_359694_c1 3300050513 Bacteria 1225
256 nmdc:mga0sz30_148556_c1 3300050516 Bacteria 1036
257 nmdc:mga0sz30_80911_c1 3300050516 Bacteria 1406
258 Ga0495601_0104260 3300053077 Bacteria 1833
259 Ga0495601_0131532 3300053077 Bacteria 1630
260 Ga0495601_0459053 3300053077 Bacteria 823
261 Ga0495619_0123542 3300053085 Bacteria 1775
262 Ga0495619_0572686 3300053085 Bacteria 774
263 Ga0500646_0014093 3300053090 Bacteria 2074
264 Ga0500566_0126684 3300053094 Bacteria 1371
265 Ga0500595_003057 3300053119 Bacteria 7954
266 Ga0500608_204166 3300053122 Bacteria 814
267 Ga0500658_0038233 3300053134 Bacteria 1912
268 Ga0500604_0058149 3300053151 Bacteria 1209
269 Ga0501084_0017865 3300054114 Bacteria 5903
270 Ga0501082_0096938 3300060353 Unclassified 2549
271 Ga0501082_0101380 3300060353 Bacteria 2490
272 Ga0496112_0355118
273 Ga0065715_10120702
274 Ga0068869_100460360
275 Ga0070680_100180009
276 Ga0070660_100733346
277 Ga0070668_100324817
278 Ga0070669_100120369
279 Ga0070674_100486248
280 Ga0070709_10164212
281 Ga0070714_100225440
282 Ga0070714_100255190
283 Ga0070713_100024739
284 Ga0070713_100179625
285 Ga0070713_100743335
286 Ga0070710_10113816
287 Ga0070711_100611079
288 Ga0070662_100009002
289 Ga0070681_10860744
290 Ga0070698_100298681
291 Ga0070684_100069237
292 Ga0070684_100736676
293 Ga0070672_100326339
294 Ga0070665_100174562
295 Ga0068855_100184250
296 Ga0068864_100847026
297 Ga0068858_100374572
298 Ga0068862_100278487
299 Ga0081455_10029411
300 Ga0070717_10089071
301 Ga0070717_10592266
302 Ga0075365_10355654
303 Ga0075368_10046368
304 Ga0075364_10215008
305 Ga0070716_100283978
306 Ga0070712_100204945
307 Ga0075362_10036311
308 Ga0075362_10044477
309 Ga0075367_10273518
310 Ga0075367_10410544
311 Ga0075369_10031145
312 Ga0075369_10092854
313 Ga0075366_10129976
314 Ga0075428_100001655
315 Ga0075430_100131004
316 Ga0075431_100000499
317 Ga0075431_100509932
318 Ga0075433_10134943
319 Ga0075434_100116043
320 Ga0075434_100344655
321 Ga0075429_100087490
322 Ga0075435_100084028
323 Ga0075435_100460649
324 Ga0111539_10001595
325 Ga0114129_10000066
326 Ga0114129_10028547
327 Ga0105241_10041936
328 Ga0105238_10089167
329 Ga0157371_10060274
330 Ga0157369_10166269
331 Ga0157378_10399977
332 Ga0157372_10077323
333 Ga0163163_10367614
334 Ga0157379_10653906
335 Ga0157376_10150489
336 Ga0163161_10099455
337 Ga0228598_1000519
338 Ga0228598_1012790
339 Ga0228598_1015255
340 Ga0207692_10170591
341 Ga0207699_10125159
342 Ga0207699_10174836
343 Ga0207699_10232768
344 Ga0207699_10308624
345 Ga0207707_10724148
346 Ga0207671_10190468
347 Ga0207693_10010311
348 Ga0207693_10304068
349 Ga0207663_10152663
350 Ga0207663_10710881
351 Ga0207660_10128819
352 Ga0207657_10374303
353 Ga0207681_10288866
354 Ga0207687_10153911
355 Ga0207700_10156006
356 Ga0207664_10033708
357 Ga0207664_10307458
358 Ga0207706_10014123
359 Ga0207706_10514527
360 Ga0207670_10526746
361 Ga0207669_10415918
362 Ga0207691_10410286
363 Ga0207689_10110522
364 Ga0207658_10545448
365 Ga0207703_10339707
366 Ga0207675_100763154
367 Ga0207428_10038074
368 Ga0268265_10060887
369 Ga0268265_10344827
370 Ga0265760_10075270
371 Ga0265325_10024452
372 Ga0265339_10000900
373 Ga0307513_10138608
374 Ga0265313_10000171
375 Ga0265314_10139478
376 Ga0373944_0006853
377 Ga0373936_0016717
378 Ga0373953_0041704
379 Ga0373954_0054428
380 Ga0373956_0025573
381 Ga0373956_0122512
382 Ga0373943_0002094
383 Ga0373943_0337891
384 Ga0373946_0010314
385 Ga0373955_0075337
386 Ga0373924_0030088
387 Ga0373931_0195649
388 Ga0373935_0071997
389 Ga0373935_0368649
390 Ga0373927_0001380
391 Ga0373927_0031559
392 Ga0373927_0509501
393 Ga0373933_0016650
394 Ga0373933_0059156
395 Ga0373933_0087556
396 Ga0373933_0223775
397 Ga0373947_0001198
398 Ga0373947_0111272
399 Ga0373947_0623873
400 Ga0373937_0017818
401 Ga0373937_0037096
402 Ga0373937_0221170
403 Ga0373937_0533389
404 Ga0373937_0848450
405 Ga0373925_0019162
406 Ga0373925_0129256
407 Ga0373925_0152552
408 Ga0373925_0341178
409 Ga0373925_0411677
410 Ga0439453_0012647
411 Ga0439453_0073910
412 Ga0439443_001872
413 Ga0439444_0032113
414 Ga0439464_0019707
415 Ga0439440_0006080
416 Ga0495592_0027551
417 Ga0495592_0034092
418 Ga0495603_0279250
419 Ga0495629_0095735
420 Ga0495629_0453466
421 Ga0495638_0010146
422 Ga0495651_0032562
423 Ga0495651_0204680
424 Ga0495653_0060759
425 Ga0495664_0197069
426 Ga0495594_0179329
427 Ga0495608_0172642
428 Ga0495608_0267181
429 Ga0495618_0230037
430 Ga0495618_0239490
431 Ga0495628_0066573
432 Ga0495628_0103672
433 Ga0495628_0459845
434 Ga0495630_0148780
435 Ga0495630_0181497
436 Ga0495666_0029769
437 Ga0495652_0071579
438 Ga0495652_0215252
439 Ga0495665_0160293
440 Ga0495640_0049017
441 Ga0495640_0084423
442 Ga0495587_0039946
443 Ga0495587_0095652
444 Ga0495587_0147306
445 Ga0495645_0366342
446 Ga0495667_0153016
447 Ga0495667_0264842
448 Ga0495634_0270442
449 Ga0495634_0383812
450 Ga0495657_0266886
451 Ga0495623_0024671
452 Ga0495623_0044043
453 Ga0495646_0339495
454 Ga0495647_0397130
455 Ga0495658_0082152
456 Ga0495658_0333158
457 Ga0495613_0056694
458 Ga0495613_0121717
459 Ga0495613_0154173
460 Ga0495624_0005221
461 Ga0495600_0097626
462 Ga0495581_0002788
463 Ga0495581_0087181
464 Ga0495581_0256293
465 Ga0495604_0497261
466 Ga0495674_0060946
467 Ga0495674_0253083
468 Ga0495676_0089255
469 Ga0495680_0088842
470 Ga0495680_0099589
471 Ga0495680_0427472
472 Ga0495684_0004082
473 Ga0495684_0106884
474 Ga0495684_0300058
475 Ga0495602_0021444
476 Ga0496102_0568782
477 Ga0496104_0000410
478 Ga0496104_0057689
479 Ga0496105_0004253
480 Ga0496105_0059442
481 Ga0496106_0430422
482 Ga0496109_0202355
483 Ga0496111_0330239
484 Ga0496115_0057367
485 Ga0496115_0529696
486 Ga0501033_0725989
487 Ga0501034_0437056
488 Ga0501036_0224553
489 Ga0501038_0497959
490 Ga0501039_0161407
491 Ga0501040_0076516
492 Ga0501040_0154929
493 Ga0501041_0047729
494 Ga0501042_0299591
495 Ga0501047_0058507
496 Ga0501047_0574248
497 Ga0501070_0161855
498 Ga0501072_0089816
499 Ga0501075_0009091
500 Ga0501075_0080125
501 Ga0501075_0082774
502 Ga0501077_0014536
503 Ga0501079_0127802
504 Ga0501080_0089886
505 Ga0501081_0476884
506 Ga0501083_0109494
507 Ga0501044_0051839
508 Ga0501045_0162077
509 nmdc:mga03683_126668_c1
510 nmdc:mga03683_83011_c1
511 nmdc:mga0k408_108632_c1
512 nmdc:mga06z11_232606_c1
513 nmdc:mga07m45_12111_c1
514 nmdc:mga07m45_212380_c1
515 nmdc:mga05p37_19716_c1
516 nmdc:mga05p37_681_c1
517 nmdc:mga0qj67_149304_c1
518 nmdc:mga06r32_119792_c1
519 nmdc:mga06r32_382875_c1
520 nmdc:mga06r32_394_c1
521 nmdc:mga06r32_817001_c1
522 nmdc:mga08y16_191798_c1
523 nmdc:mga08y16_9178_c1
524 nmdc:mga0n895_12772_c1
525 nmdc:mga0n895_342508_c1
526 nmdc:mga0rr50_359694_c1
527 nmdc:mga0sz30_148556_c1
528 nmdc:mga0sz30_80911_c1
529 Ga0495601_0104260
530 Ga0495601_0131532
531 Ga0495601_0459053
532 Ga0495619_0123542
533 Ga0495619_0572686
534 Ga0500646_0014093
535 Ga0500566_0126684
536 Ga0500595_003057
537 Ga0500608_204166
538 Ga0500658_0038233
539 Ga0500604_0058149
540 Ga0501084_0017865
541 Ga0501082_0096938
542 Ga0501082_0101380

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00325

Crp

Bacterial regulatory proteins, crp family

198

226

0.96

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

61

146

0.95

PF13545

HTH_Crp_2

Crp-like helix-turn-helix domain

177

248

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5e44-assembly1.cif.gz_A-2 crystal structure of holo-fnr of a. fischeri 0.9592 46 233
4i2o-assembly1.cif.gz_B the structure of fixk2 from bradyrhizobium japonicum 0.9399 41 234
5kbf-assembly2.cif.gz_B camp bound pfpka-r (141-441) 0.9343 45 125
5cvr-assembly1.cif.gz_A-2 crystal structure of fnr of a. fischeri in a partially degraded form 0.9309 39 234
4i2o-assembly1.cif.gz_B the structure of fixk2 from bradyrhizobium japonicum 0.9173 41 234
ID Description Score Start End Superfamily
5e44A01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9681 46 158 2.60.120.10
4i2oB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9531 158 234 1.10.10.10
5kbfB01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9343 45 125 2.60.120.10
4i2oB01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.929 41 158 2.60.120.10
5cvrA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9228 39 158 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A431RX40-F1-model_v4 deleted 0.9787 43 234
AF-A0A840MR92-F1-model_v4 CRP-like cAMP-binding protein 0.9784 43 234 GO:0003677
GO:0003700
GO:0005829
AF-A0A2U8P0S7-F1-model_v4 Transcriptional regulator 0.9696 45 234 GO:0003677
GO:0003700
GO:0005829
AF-A0A454D2S9-F1-model_v4 Fumarate and nitrate reduction regulatory protein 0.9677 46 173 GO:0003677
GO:0003700
GO:0005829
AF-A0A1Q5RBJ4-F1-model_v4 Transcriptional regulator 0.9671 43 227 GO:0003677
GO:0003700
GO:0005829

Map