F377696

General Info

Members Datasets Scaffolds Average Seq Length
271 181 542 519

Family's Representative Sequence

Representative Sequence 3300025927|Ga0207687_10008895|Ga0207687_100088956
Length 543
Sequence VADMASTVNSGSDGVVRGSPDKPDRDSGVKLPELVSAFSLATDLGMGLPMEHVLRSWRIAARLGDRIGVPSDERGALYYVTTLAWVGCVADTPEVAAVFGDDIGFRRDSYDVDFAGLPMLGFMLRHVGAGSPPLHRLRLAANLVKTGGKKIERGLMSHCLTTARIAERFGLDDSVCQPLQQVFTRFDGKGVPGKIGGDDIALSMRLFHLADTVEVHHRTTGTDAAVDVARSRRGKHFDPTVVDAFCDMADEVLGDPADEPDWRALVDGEPSLQHRLTERELDNALEAIADFTDLRSAPRSGHSRAVAELAGRAAAERGLPDVDIAAIRRAGLVHDIGLHGIPATILDKPGPLSERETERMRMHPYYTERMLARPDSLARIGAIASMVHERCDGSGYHRGLTSAAIPATARVLAAACAFQAMTEPRSHRPALTAKQASSELRADVRAGRLDADAVDAVLAAAGQARGKRRTGPAGLTPREIEVLALIARGASTRQVAQRLTITPKTAETHIERIYAKIGASTRSTATLFAMQHGLLDTLEPFDL

Samples

Sample ID Description Type Environment
1 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
114 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
115 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
116 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
117 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
124 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
131 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
132 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
145 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
177 2643221615 Nocardioides sp. Root224 Isolate Unclassified
178 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
179 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
180 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
181 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.15
Metatranscriptomes 0
Isolates 1.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.8
Nodule 0
Rhizoplane 9.23
Rhizosphere 84.5
Stem 0
Stem Tuber 0.37
Unclassified 1.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207687_10008895 3300025927 Bacteria 6564
2 Ga0070658_10023397 3300005327 Bacteria 4960
3 Ga0070658_10037521 3300005327 Bacteria 3907
4 Ga0070658_10096134 3300005327 Bacteria 2445
5 Ga0070683_100001699 3300005329 Bacteria 17118
6 Ga0070683_100059578 3300005329 Bacteria 3547
7 Ga0070670_100023461 3300005331 Bacteria 5311
8 Ga0070680_100040521 3300005336 Bacteria 3772
9 Ga0070680_100076787 3300005336 Bacteria 2750
10 Ga0070682_100026024 3300005337 Bacteria 3497
11 Ga0070682_100059309 3300005337 Bacteria 2417
12 Ga0068868_100057865 3300005338 Bacteria 3063
13 Ga0070660_100029890 3300005339 Bacteria 4085
14 Ga0070660_100068951 3300005339 Bacteria 2757
15 Ga0070689_100076105 3300005340 Bacteria 2629
16 Ga0070692_10010845 3300005345 Bacteria 4166
17 Ga0070675_100055064 3300005354 Bacteria 3273
18 Ga0070671_100005469 3300005355 Bacteria 10138
19 Ga0070671_100014133 3300005355 Bacteria 6446
20 Ga0070659_100044719 3300005366 Bacteria 3468
21 Ga0070700_100096239 3300005441 Bacteria 1942
22 Ga0070708_100001720 3300005445 Bacteria 16828
23 Ga0070708_100029275 3300005445 Bacteria 4748
24 Ga0070708_100154446 3300005445 Bacteria 2136
25 Ga0070663_100016089 3300005455 Bacteria 4845
26 Ga0070678_100003251 3300005456 Bacteria 9027
27 Ga0070662_100058009 3300005457 Bacteria 2816
28 Ga0070681_10025429 3300005458 Bacteria 5955
29 Ga0070681_10051977 3300005458 Bacteria 4086
30 Ga0068867_100077720 3300005459 Bacteria 2495
31 Ga0070706_100000937 3300005467 Bacteria 31912
32 Ga0070706_100054531 3300005467 Bacteria 3689
33 Ga0070707_100032684 3300005468 Bacteria 4957
34 Ga0070707_100051969 3300005468 Bacteria 3928
35 Ga0070707_100127227 3300005468 Bacteria 2475
36 Ga0070698_100002905 3300005471 Bacteria 18860
37 Ga0070698_100024451 3300005471 Bacteria 6303
38 Ga0070699_100003380 3300005518 Bacteria 14113
39 Ga0070699_100005379 3300005518 Bacteria 11231
40 Ga0070679_100078475 3300005530 Bacteria 3290
41 Ga0070684_100010818 3300005535 Bacteria 7246
42 Ga0070684_100010909 3300005535 Bacteria 7220
43 Ga0070684_100055198 3300005535 Bacteria 3462
44 Ga0068857_100019129 3300005577 Bacteria 6011
45 Ga0068854_100078421 3300005578 Bacteria 2433
46 Ga0068856_100148722 3300005614 Bacteria 2350
47 Ga0070702_100020073 3300005615 Bacteria 3495
48 Ga0068852_100082781 3300005616 Bacteria 2852
49 Ga0068864_100119751 3300005618 Bacteria 2352
50 Ga0068870_10003463 3300005840 Bacteria 6687
51 Ga0068863_100071316 3300005841 Bacteria 3286
52 Ga0068863_100077670 3300005841 Bacteria 3142
53 Ga0068858_100019719 3300005842 Bacteria 6305
54 Ga0068858_100134539 3300005842 Bacteria 2319
55 Ga0068860_100001468 3300005843 Bacteria 25481
56 Ga0081455_10016610 3300005937 Bacteria 7097
57 Ga0081455_10017874 3300005937 Bacteria 6778
58 Ga0081538_10026616 3300005981 Bacteria 4040
59 Ga0070717_10016568 3300006028 Bacteria 5716
60 Ga0070717_10128388 3300006028 Bacteria 2178
61 Ga0075365_10000500 3300006038 Bacteria 14908
62 Ga0075368_10000652 3300006042 Bacteria 10552
63 Ga0075364_10009264 3300006051 Bacteria 5903
64 Ga0075364_10029866 3300006051 Bacteria 3497
65 Ga0075370_10002504 3300006353 Bacteria 8530
66 Ga0068871_100053754 3300006358 Bacteria 3265
67 Ga0075428_100042378 3300006844 Bacteria 5004
68 Ga0075430_100001711 3300006846 Bacteria 17894
69 Ga0075431_100002670 3300006847 Bacteria 17285
70 Ga0075431_100002744 3300006847 Bacteria 17068
71 Ga0075431_100007511 3300006847 Bacteria 10851
72 Ga0075433_10005063 3300006852 Bacteria 10333
73 Ga0075433_10013948 3300006852 Bacteria 6552
74 Ga0075434_100012544 3300006871 Bacteria 8038
75 Ga0075434_100117695 3300006871 Bacteria 2670
76 Ga0075434_100118657 3300006871 Bacteria 2659
77 Ga0075429_100004553 3300006880 Bacteria 11917
78 Ga0075436_100001878 3300006914 Bacteria 14437
79 Ga0075436_100066138 3300006914 Bacteria 2498
80 Ga0075435_100003474 3300007076 Bacteria 10689
81 Ga0075435_100058677 3300007076 Unclassified 3118
82 Ga0099794_10034841 3300007265 Bacteria 2374
83 Ga0105245_10005797 3300009098 Bacteria 10837
84 Ga0105245_10021795 3300009098 Bacteria 5623
85 Ga0105245_10103666 3300009098 Bacteria 2636
86 Ga0105245_10126525 3300009098 Bacteria 2393
87 Ga0114129_10154771 3300009147 Bacteria 3136
88 Ga0105243_10053779 3300009148 Bacteria 3195
89 Ga0105241_10004425 3300009174 Bacteria 10390
90 Ga0105242_10041730 3300009176 Bacteria 3702
91 Ga0105248_10022048 3300009177 Bacteria 7058
92 Ga0105237_10089102 3300009545 Bacteria 3075
93 Ga0105237_10151897 3300009545 Bacteria 2312
94 Ga0105249_10021644 3300009553 Bacteria 5757
95 Ga0105239_10015531 3300010375 Bacteria 8433
96 Ga0105239_10122380 3300010375 Bacteria 2890
97 Ga0105246_10000911 3300011119 Bacteria 16930
98 Ga0105246_10002762 3300011119 Bacteria 10621
99 Ga0105246_10036635 3300011119 Bacteria 3288
100 Ga0157371_10022649 3300013102 Bacteria 4597
101 Ga0157370_10108862 3300013104 Bacteria 2590
102 Ga0157369_10144321 3300013105 Bacteria 2517
103 Ga0157369_10177415 3300013105 Bacteria 2243
104 Ga0157374_10114888 3300013296 Bacteria 2592
105 Ga0157374_10149014 3300013296 Bacteria 2274
106 Ga0163162_10013188 3300013306 Bacteria 8071
107 Ga0157372_10015898 3300013307 Bacteria 8074
108 Ga0157375_10079617 3300013308 Bacteria 3313
109 Ga0157375_10105486 3300013308 Bacteria 2908
110 Ga0157375_10114946 3300013308 Bacteria 2794
111 Ga0163163_10006286 3300014325 Bacteria 10370
112 Ga0163163_10083031 3300014325 Bacteria 3208
113 Ga0163163_10105620 3300014325 Bacteria 2842
114 Ga0157377_10034766 3300014745 Bacteria 2759
115 Ga0157379_10072363 3300014968 Bacteria 3084
116 Ga0207688_10022892 3300025901 Bacteria 3420
117 Ga0207699_10081085 3300025906 Bacteria 2012
118 Ga0207643_10000496 3300025908 Bacteria 25178
119 Ga0207643_10006245 3300025908 Bacteria 6374
120 Ga0207705_10010928 3300025909 Bacteria 6591
121 Ga0207705_10092894 3300025909 Bacteria 2212
122 Ga0207684_10000988 3300025910 Bacteria 31913
123 Ga0207684_10001614 3300025910 Bacteria 23943
124 Ga0207684_10193894 3300025910 Bacteria 1752
125 Ga0207654_10034578 3300025911 Bacteria 2809
126 Ga0207707_10005997 3300025912 Bacteria 10637
127 Ga0207707_10071078 3300025912 Bacteria 3032
128 Ga0207671_10040115 3300025914 Bacteria 3466
129 Ga0207660_10057642 3300025917 Bacteria 2782
130 Ga0207660_10110322 3300025917 Bacteria 2069
131 Ga0207657_10003201 3300025919 Bacteria 17523
132 Ga0207657_10012842 3300025919 Bacteria 8240
133 Ga0207649_10023034 3300025920 Bacteria 3603
134 Ga0207652_10012891 3300025921 Bacteria 6762
135 Ga0207652_10138188 3300025921 Bacteria 2177
136 Ga0207646_10000730 3300025922 Bacteria 42664
137 Ga0207646_10042295 3300025922 Bacteria 4093
138 Ga0207694_10137226 3300025924 Bacteria 1965
139 Ga0207650_10047958 3300025925 Bacteria 3149
140 Ga0207664_10036385 3300025929 Bacteria 3805
141 Ga0207644_10006975 3300025931 Bacteria 7357
142 Ga0207644_10012774 3300025931 Bacteria 5583
143 Ga0207709_10027447 3300025935 Bacteria 3280
144 Ga0207665_10099941 3300025939 Bacteria 2024
145 Ga0207711_10137397 3300025941 Bacteria 2196
146 Ga0207689_10063064 3300025942 Bacteria 3048
147 Ga0207661_10005461 3300025944 Bacteria 8963
148 Ga0207661_10008656 3300025944 Bacteria 7272
149 Ga0207679_10051928 3300025945 Bacteria 3004
150 Ga0207667_10173637 3300025949 Bacteria 2215
151 Ga0207677_10057222 3300026023 Bacteria 2676
152 Ga0207703_10065090 3300026035 Bacteria 2995
153 Ga0207703_10098045 3300026035 Bacteria 2478
154 Ga0207678_10035461 3300026067 Bacteria 4343
155 Ga0207678_10053854 3300026067 Bacteria 3466
156 Ga0207702_10089831 3300026078 Bacteria 2687
157 Ga0207641_10049436 3300026088 Bacteria 3553
158 Ga0207641_10056959 3300026088 Bacteria 3323
159 Ga0207676_10003083 3300026095 Bacteria 11896
160 Ga0207676_10064371 3300026095 Bacteria 2916
161 Ga0207674_10022506 3300026116 Bacteria 6766
162 Ga0207674_10069740 3300026116 Bacteria 3535
163 Ga0207674_10124365 3300026116 Bacteria 2545
164 Ga0207683_10004433 3300026121 Bacteria 12130
165 Ga0207698_10076121 3300026142 Bacteria 2685
166 Ga0209588_1000068 3300027671 Bacteria 35839
167 Ga0209813_10000331 3300027866 Bacteria 12418
168 Ga0207428_10052605 3300027907 Bacteria 3251
169 Ga0268264_10000238 3300028381 Bacteria 105229
170 Ga0307409_100105444 3300031995 Bacteria 2350
171 Ga0307415_100009727 3300032126 Bacteria 5409
172 Ga0373930_0002372 3300034816 Unclassified 2910
173 Ga0373934_0041570 3300035086 Bacteria 1815
174 Ga0373932_0000052 3300035112 Bacteria 28410
175 Ga0373943_0044965 3300035170 Bacteria 2150
176 Ga0373931_0000006 3300035691 Bacteria 437006
177 Ga0373931_0000023 3300035691 Bacteria 130307
178 Ga0373935_0035358 3300035692 Bacteria 3118
179 Ga0373933_0021227 3300035724 Bacteria 3687
180 Ga0373937_0014488 3300036401 Bacteria 6963
181 Ga0395898_0008302 3300037466 Bacteria 10978
182 Ga0395898_0053505 3300037466 Bacteria 3943
183 Ga0395901_0010731 3300038443 Bacteria 9287
184 Ga0395901_0133605 3300038443 Bacteria 2608
185 Ga0439448_0040050 3300042005 Bacteria 1512
186 Ga0466965_0035609 3300044683 Bacteria 2439
187 Ga0466963_0011920 3300044694 Bacteria 5309
188 Ga0466970_0008699 3300044765 Bacteria 5115
189 Ga0466959_0003844 3300045049 Bacteria 9961
190 Ga0466967_0018454 3300045976 Bacteria 5576
191 Ga0466967_0034159 3300045976 Bacteria 4313
192 Ga0466967_0050702 3300045976 Bacteria 3635
193 Ga0495651_0004112 3300046462 Bacteria 11138
194 Ga0495582_0072242 3300046473 Bacteria 1909
195 Ga0495582_0087423 3300046473 Bacteria 1735
196 Ga0495639_0025634 3300046475 Bacteria 2601
197 Ga0495662_0013987 3300046476 Bacteria 3907
198 Ga0495608_0058979 3300046511 Bacteria 2529
199 Ga0495618_0037261 3300046514 Bacteria 3053
200 Ga0495652_0017104 3300046529 Bacteria 6474
201 Ga0495640_0026763 3300046533 Bacteria 4163
202 Ga0495587_0024965 3300046536 Bacteria 3658
203 Ga0495645_0004292 3300046543 Bacteria 9738
204 Ga0495635_0095951 3300046663 Bacteria 2027
205 Ga0495657_0003964 3300046675 Bacteria 11882
206 Ga0495599_0000894 3300046678 Bacteria 16666
207 Ga0495604_0029989 3300047317 Bacteria 4324
208 Ga0495604_0050943 3300047317 Unclassified 3213
209 Ga0495674_0005002 3300047319 Bacteria 12750
210 Ga0495680_0001093 3300047322 Bacteria 30065
211 Ga0495675_0002524 3300047444 Bacteria 10964
212 Ga0495675_0077881 3300047444 Bacteria 2088
213 Ga0495684_0005115 3300047471 Bacteria 10230
214 Ga0495602_0031883 3300048088 Bacteria 4973
215 Ga0495602_0039100 3300048088 Bacteria 4374
216 Ga0495602_0099556 3300048088 Bacteria 2389
217 Ga0496101_0045495 3300048904 Bacteria 3144
218 Ga0496104_0087034 3300048907 Bacteria 2983
219 Ga0496104_0088074 3300048907 Bacteria 2965
220 Ga0496104_0136946 3300048907 Bacteria 2352
221 Ga0496105_0006129 3300048908 Bacteria 9208
222 Ga0496105_0058446 3300048908 Bacteria 3183
223 Ga0496106_0002362 3300048909 Bacteria 14048
224 Ga0496108_0008118 3300048911 Bacteria 8513
225 Ga0496108_0053659 3300048911 Bacteria 3381
226 Ga0496108_0075171 3300048911 Bacteria 2854
227 Ga0496109_0032488 3300048912 Bacteria 4692
228 Ga0496109_0048849 3300048912 Bacteria 3850
229 Ga0496109_0073072 3300048912 Bacteria 3151
230 Ga0496109_0126813 3300048912 Unclassified 2380
231 Ga0496110_0011473 3300048913 Bacteria 7252
232 Ga0496110_0023374 3300048913 Bacteria 5256
233 Ga0496110_0045767 3300048913 Bacteria 3825
234 Ga0496110_0084204 3300048913 Bacteria 2838
235 Ga0496110_0134331 3300048913 Bacteria 2235
236 Ga0496111_0001546 3300048914 Bacteria 13249
237 Ga0496111_0001962 3300048914 Bacteria 12219
238 Ga0496111_0077638 3300048914 Bacteria 2421
239 Ga0496112_0048983 3300048915 Bacteria 4140
240 Ga0496112_0095416 3300048915 Bacteria 2944
241 Ga0496112_0282049 3300048915 Bacteria 1608
242 Ga0501292_004621 3300049515 Bacteria 1891
243 Ga0501075_0089764 3300049591 Bacteria 2331
244 Ga0501225_0003764 3300049705 Bacteria 4563
245 nmdc:mga03n38_23108_c1 3300050490 Bacteria 2525
246 nmdc:mga00v17_34430_c1 3300050491 Bacteria 3008
247 nmdc:mga0yw44_29596_c1 3300050492 Bacteria 3163
248 nmdc:mga06z11_11055_c1 3300050494 Bacteria 3875
249 nmdc:mga06z11_12242_c1 3300050494 Bacteria 3726
250 nmdc:mga04h51_2042_c1 3300050495 Bacteria 4734
251 nmdc:mga07m45_5380_c2 3300050496 Bacteria 4391
252 nmdc:mga05p37_105560_c1 3300050507 Bacteria 3466
253 nmdc:mga09592_9300_c1 3300050508 Bacteria 7989
254 nmdc:mga0qj67_23800_c1 3300050509 Bacteria 4716
255 nmdc:mga06r32_10396_c1 3300050510 Bacteria 8397
256 nmdc:mga06r32_169183_c1 3300050510 Bacteria 2169
257 nmdc:mga06r32_4063_c1 3300050510 Bacteria 13120
258 nmdc:mga08y16_12180_c1 3300050511 Bacteria 9039
259 nmdc:mga0n895_10832_c1 3300050512 Bacteria 8092
260 nmdc:mga0n895_78611_c1 3300050512 Bacteria 3283
261 nmdc:mga0rr50_208359_c1 3300050513 Bacteria 1609
262 nmdc:mga08x19_21485_c1 3300050514 Bacteria 3986
263 nmdc:mga08x19_85463_c1 3300050514 Bacteria 2076
264 nmdc:mga0a205_72951_c1 3300050515 Bacteria 3317
265 Ga0495619_0110704 3300053085 Bacteria 1876
266 Ga0530510_0012390 3300061734 Bacteria 5991
267 2644093587 2643221615 Bacteria 5487866
268 2644320346 2643221657 Bacteria 5490246
269 2744955515 2744054611 Bacteria 5611514
270 2899371395 2899370129 Bacteria 6781179
271 8003315637 8003314358 Bacteria 10575343
272 Ga0207687_10008895
273 Ga0070658_10023397
274 Ga0070658_10037521
275 Ga0070658_10096134
276 Ga0070683_100001699
277 Ga0070683_100059578
278 Ga0070670_100023461
279 Ga0070680_100040521
280 Ga0070680_100076787
281 Ga0070682_100026024
282 Ga0070682_100059309
283 Ga0068868_100057865
284 Ga0070660_100029890
285 Ga0070660_100068951
286 Ga0070689_100076105
287 Ga0070692_10010845
288 Ga0070675_100055064
289 Ga0070671_100005469
290 Ga0070671_100014133
291 Ga0070659_100044719
292 Ga0070700_100096239
293 Ga0070708_100001720
294 Ga0070708_100029275
295 Ga0070708_100154446
296 Ga0070663_100016089
297 Ga0070678_100003251
298 Ga0070662_100058009
299 Ga0070681_10025429
300 Ga0070681_10051977
301 Ga0068867_100077720
302 Ga0070706_100000937
303 Ga0070706_100054531
304 Ga0070707_100032684
305 Ga0070707_100051969
306 Ga0070707_100127227
307 Ga0070698_100002905
308 Ga0070698_100024451
309 Ga0070699_100003380
310 Ga0070699_100005379
311 Ga0070679_100078475
312 Ga0070684_100010818
313 Ga0070684_100010909
314 Ga0070684_100055198
315 Ga0068857_100019129
316 Ga0068854_100078421
317 Ga0068856_100148722
318 Ga0070702_100020073
319 Ga0068852_100082781
320 Ga0068864_100119751
321 Ga0068870_10003463
322 Ga0068863_100071316
323 Ga0068863_100077670
324 Ga0068858_100019719
325 Ga0068858_100134539
326 Ga0068860_100001468
327 Ga0081455_10016610
328 Ga0081455_10017874
329 Ga0081538_10026616
330 Ga0070717_10016568
331 Ga0070717_10128388
332 Ga0075365_10000500
333 Ga0075368_10000652
334 Ga0075364_10009264
335 Ga0075364_10029866
336 Ga0075370_10002504
337 Ga0068871_100053754
338 Ga0075428_100042378
339 Ga0075430_100001711
340 Ga0075431_100002670
341 Ga0075431_100002744
342 Ga0075431_100007511
343 Ga0075433_10005063
344 Ga0075433_10013948
345 Ga0075434_100012544
346 Ga0075434_100117695
347 Ga0075434_100118657
348 Ga0075429_100004553
349 Ga0075436_100001878
350 Ga0075436_100066138
351 Ga0075435_100003474
352 Ga0075435_100058677
353 Ga0099794_10034841
354 Ga0105245_10005797
355 Ga0105245_10021795
356 Ga0105245_10103666
357 Ga0105245_10126525
358 Ga0114129_10154771
359 Ga0105243_10053779
360 Ga0105241_10004425
361 Ga0105242_10041730
362 Ga0105248_10022048
363 Ga0105237_10089102
364 Ga0105237_10151897
365 Ga0105249_10021644
366 Ga0105239_10015531
367 Ga0105239_10122380
368 Ga0105246_10000911
369 Ga0105246_10002762
370 Ga0105246_10036635
371 Ga0157371_10022649
372 Ga0157370_10108862
373 Ga0157369_10144321
374 Ga0157369_10177415
375 Ga0157374_10114888
376 Ga0157374_10149014
377 Ga0163162_10013188
378 Ga0157372_10015898
379 Ga0157375_10079617
380 Ga0157375_10105486
381 Ga0157375_10114946
382 Ga0163163_10006286
383 Ga0163163_10083031
384 Ga0163163_10105620
385 Ga0157377_10034766
386 Ga0157379_10072363
387 Ga0207688_10022892
388 Ga0207699_10081085
389 Ga0207643_10000496
390 Ga0207643_10006245
391 Ga0207705_10010928
392 Ga0207705_10092894
393 Ga0207684_10000988
394 Ga0207684_10001614
395 Ga0207684_10193894
396 Ga0207654_10034578
397 Ga0207707_10005997
398 Ga0207707_10071078
399 Ga0207671_10040115
400 Ga0207660_10057642
401 Ga0207660_10110322
402 Ga0207657_10003201
403 Ga0207657_10012842
404 Ga0207649_10023034
405 Ga0207652_10012891
406 Ga0207652_10138188
407 Ga0207646_10000730
408 Ga0207646_10042295
409 Ga0207694_10137226
410 Ga0207650_10047958
411 Ga0207664_10036385
412 Ga0207644_10006975
413 Ga0207644_10012774
414 Ga0207709_10027447
415 Ga0207665_10099941
416 Ga0207711_10137397
417 Ga0207689_10063064
418 Ga0207661_10005461
419 Ga0207661_10008656
420 Ga0207679_10051928
421 Ga0207667_10173637
422 Ga0207677_10057222
423 Ga0207703_10065090
424 Ga0207703_10098045
425 Ga0207678_10035461
426 Ga0207678_10053854
427 Ga0207702_10089831
428 Ga0207641_10049436
429 Ga0207641_10056959
430 Ga0207676_10003083
431 Ga0207676_10064371
432 Ga0207674_10022506
433 Ga0207674_10069740
434 Ga0207674_10124365
435 Ga0207683_10004433
436 Ga0207698_10076121
437 Ga0209588_1000068
438 Ga0209813_10000331
439 Ga0207428_10052605
440 Ga0268264_10000238
441 Ga0307409_100105444
442 Ga0307415_100009727
443 Ga0373930_0002372
444 Ga0373934_0041570
445 Ga0373932_0000052
446 Ga0373943_0044965
447 Ga0373931_0000006
448 Ga0373931_0000023
449 Ga0373935_0035358
450 Ga0373933_0021227
451 Ga0373937_0014488
452 Ga0395898_0008302
453 Ga0395898_0053505
454 Ga0395901_0010731
455 Ga0395901_0133605
456 Ga0439448_0040050
457 Ga0466965_0035609
458 Ga0466963_0011920
459 Ga0466970_0008699
460 Ga0466959_0003844
461 Ga0466967_0018454
462 Ga0466967_0034159
463 Ga0466967_0050702
464 Ga0495651_0004112
465 Ga0495582_0072242
466 Ga0495582_0087423
467 Ga0495639_0025634
468 Ga0495662_0013987
469 Ga0495608_0058979
470 Ga0495618_0037261
471 Ga0495652_0017104
472 Ga0495640_0026763
473 Ga0495587_0024965
474 Ga0495645_0004292
475 Ga0495635_0095951
476 Ga0495657_0003964
477 Ga0495599_0000894
478 Ga0495604_0029989
479 Ga0495604_0050943
480 Ga0495674_0005002
481 Ga0495680_0001093
482 Ga0495675_0002524
483 Ga0495675_0077881
484 Ga0495684_0005115
485 Ga0495602_0031883
486 Ga0495602_0039100
487 Ga0495602_0099556
488 Ga0496101_0045495
489 Ga0496104_0087034
490 Ga0496104_0088074
491 Ga0496104_0136946
492 Ga0496105_0006129
493 Ga0496105_0058446
494 Ga0496106_0002362
495 Ga0496108_0008118
496 Ga0496108_0053659
497 Ga0496108_0075171
498 Ga0496109_0032488
499 Ga0496109_0048849
500 Ga0496109_0073072
501 Ga0496109_0126813
502 Ga0496110_0011473
503 Ga0496110_0023374
504 Ga0496110_0045767
505 Ga0496110_0084204
506 Ga0496110_0134331
507 Ga0496111_0001546
508 Ga0496111_0001962
509 Ga0496111_0077638
510 Ga0496112_0048983
511 Ga0496112_0095416
512 Ga0496112_0282049
513 Ga0501292_004621
514 Ga0501075_0089764
515 Ga0501225_0003764
516 nmdc:mga03n38_23108_c1
517 nmdc:mga00v17_34430_c1
518 nmdc:mga0yw44_29596_c1
519 nmdc:mga06z11_11055_c1
520 nmdc:mga06z11_12242_c1
521 nmdc:mga04h51_2042_c1
522 nmdc:mga07m45_5380_c2
523 nmdc:mga05p37_105560_c1
524 nmdc:mga09592_9300_c1
525 nmdc:mga0qj67_23800_c1
526 nmdc:mga06r32_10396_c1
527 nmdc:mga06r32_169183_c1
528 nmdc:mga06r32_4063_c1
529 nmdc:mga08y16_12180_c1
530 nmdc:mga0n895_10832_c1
531 nmdc:mga0n895_78611_c1
532 nmdc:mga0rr50_208359_c1
533 nmdc:mga08x19_21485_c1
534 nmdc:mga08x19_85463_c1
535 nmdc:mga0a205_72951_c1
536 Ga0495619_0110704
537 Ga0530510_0012390
538 2644093587
539 2644320346
540 2744955515
541 2899371395
542 8003315637

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

473

529

0.96

PF01966

HD

HD domain

299

421

0.95

PF13487

HD_5

HD domain

286

453

0.95

PF13487

HD_5

HD domain

132

241

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9614 455 515
4wul-assembly1.cif.gz_B crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9606 455 515
1zn2-assembly1.cif.gz_A low resolution structure of response regulator styr 0.9539 455 511
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9523 455 515
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9514 455 515
ID Description Score Start End Superfamily
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9592 453 511 1.10.10.10
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9579 456 511 1.10.10.10
1zn2A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9539 455 511 1.10.10.10
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9474 453 512 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9473 455 516 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3D0DY66-F1-model_v4 Metal-dependent phosphohydrolase 0.9571 261 441 GO:0008081
AF-A0A850CT22-F1-model_v4 LuxR family transcriptional regulator 0.9544 1 368 GO:0016787
AF-A0A7Y5JTP1-F1-model_v4 HD domain-containing protein 0.9543 10 438 GO:0016787
AF-A0A2V7VM13-F1-model_v4 Metal-dependent phosphohydrolase 0.9526 260 439 GO:0000160
GO:0016787
AF-A0A7Y5JTP1-F1-model_v4 HD domain-containing protein 0.9479 10 438 GO:0016787

Map