F377315

General Info

Members Datasets Scaffolds Average Seq Length
270 210 540 422

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2751185782|2753262555
Length 477
Sequence GYGVTDEAPLRRRDEPEPAGDGRPLPEPPDPTSGGPDPLPAAVPLTAPREGTPRPVESVTELADVVARMAAGTGPVAVDAERASGYRYTQRAYLVQLRRTGAGTVLIDPMPLDDLRTLDAALAESEWVLHAASQDLACLAELGMKPRRLFDTELAARLAGFERVGLAALTEQLLGYSLEKHHSAADWSTRPLPESWLTYAALDVELLTDLRDHLAAELDRQGKAAWAAEEFAALVASADRPPKVRPDPWRRTSGIHRVRGARAQSRVRALWYARDGVAARRDSAPGRVLPDSAIVAAAEQDPKDERALLAIPGFGGRSVRRLARVWLDALDEARALPDDALPVNQPMDGPPPPHRWAERDPIAAARLARCRAVVVATAESHRLPPENLISPDYIRRLAWSPPDEISARTVSDTLLGFGARNWQVGNEGSGAASAGPLARPRRERRSAPCNQARHEFDLGLETVTFLASGWHRLVTDE

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
107 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
114 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
115 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
116 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
117 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
118 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
160 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
161 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
164 2501939600 Micromonospora sp. L5 Isolate Unclassified
165 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
166 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
167 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
168 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
169 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
170 2547132424 Nocardia nova SH22a Isolate Unclassified
171 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
172 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
173 2643221692 Nocardia sp. Root136 Isolate Unclassified
174 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
175 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
176 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
177 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
178 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
179 2855683550 Micromonospora sp. RP3T Isolate Unclassified
180 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
181 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
182 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
183 2858882152 Micromonospora noduli MED15 Isolate Nodule
184 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
185 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
186 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
187 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
188 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
189 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
190 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
191 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
192 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
193 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
194 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
195 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
196 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
197 2902582711 Micromonospora sp. AP08 Isolate Unclassified
198 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
199 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
200 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
201 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
202 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
203 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
204 649633069 Micromonospora sp. L5 Isolate Unclassified
205 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
206 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
207 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
208 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
209 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
210 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.22
Metatranscriptomes 0
Isolates 17.78

Biome Distribution

Category Percentage (%)
Aerial Root 0.37
Bulb 0
Endosphere 1.48
Nodule 2.22
Rhizoplane 5.19
Rhizosphere 75.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10001256 3300005327 Bacteria 21729
2 Ga0070658_10013001 3300005327 Bacteria 6680
3 Ga0070670_100008713 3300005331 Bacteria 8658
4 Ga0068869_100024004 3300005334 Bacteria 4220
5 Ga0070680_100013769 3300005336 Bacteria 6308
6 Ga0070680_100164894 3300005336 Bacteria 1863
7 Ga0070680_100279362 3300005336 Bacteria 1415
8 Ga0070682_100001030 3300005337 Bacteria 16109
9 Ga0070660_100009704 3300005339 Bacteria 6782
10 Ga0070660_100053682 3300005339 Bacteria 3109
11 Ga0070661_100119204 3300005344 Bacteria 1975
12 Ga0070692_10005211 3300005345 Bacteria 5511
13 Ga0070668_100017919 3300005347 Bacteria 5312
14 Ga0070675_100007762 3300005354 Bacteria 8306
15 Ga0070671_100017462 3300005355 Bacteria 5812
16 Ga0070714_100166644 3300005435 Bacteria 1997
17 Ga0070713_100001950 3300005436 Bacteria 13314
18 Ga0070663_100026287 3300005455 Bacteria 3941
19 Ga0070678_100003759 3300005456 Bacteria 8508
20 Ga0070679_100007435 3300005530 Bacteria 10237
21 Ga0070684_100026733 3300005535 Bacteria 4864
22 Ga0070672_100062508 3300005543 Bacteria 2938
23 Ga0070665_100013461 3300005548 Bacteria 8229
24 Ga0070664_100083214 3300005564 Bacteria 2760
25 Ga0068854_100032900 3300005578 Bacteria 3611
26 Ga0068856_100097789 3300005614 Bacteria 2925
27 Ga0068856_100127788 3300005614 Bacteria 2545
28 Ga0070702_100000119 3300005615 Bacteria 23939
29 Ga0068852_100004358 3300005616 Bacteria 9994
30 Ga0068859_100024624 3300005617 Bacteria 6039
31 Ga0068864_100016905 3300005618 Bacteria 6079
32 Ga0068851_10003025 3300005834 Bacteria 7428
33 Ga0068870_10001727 3300005840 Bacteria 8943
34 Ga0068863_100051696 3300005841 Bacteria 3894
35 Ga0068863_100156657 3300005841 Bacteria 2181
36 Ga0068858_100026751 3300005842 Bacteria 5358
37 Ga0068860_100040410 3300005843 Bacteria 4457
38 Ga0068860_100061252 3300005843 Bacteria 3576
39 Ga0081539_10000168 3300005985 Bacteria 153724
40 Ga0081539_10001076 3300005985 Bacteria 49708
41 Ga0081539_10008189 3300005985 Bacteria 9209
42 Ga0070717_10127236 3300006028 Bacteria 2188
43 Ga0097621_100013502 3300006237 Bacteria 6090
44 Ga0075428_100001203 3300006844 Bacteria 27710
45 Ga0075428_100040796 3300006844 Bacteria 5106
46 Ga0075430_100014536 3300006846 Bacteria 6706
47 Ga0075431_100193691 3300006847 Bacteria 2082
48 Ga0075433_10007349 3300006852 Bacteria 8742
49 Ga0075434_100015194 3300006871 Bacteria 7376
50 Ga0075429_100003629 3300006880 Bacteria 13147
51 Ga0075429_100038013 3300006880 Bacteria 4189
52 Ga0075436_100003248 3300006914 Bacteria 11139
53 Ga0097620_100024624 3300006931 Bacteria 6039
54 Ga0075435_100006362 3300007076 Bacteria 8348
55 Ga0105240_10040844 3300009093 Bacteria 5928
56 Ga0111539_10200101 3300009094 Bacteria 2330
57 Ga0105245_10002680 3300009098 Bacteria 16017
58 Ga0114129_10020264 3300009147 Bacteria 9463
59 Ga0105243_10002769 3300009148 Bacteria 14579
60 Ga0105241_10008093 3300009174 Bacteria 7735
61 Ga0105248_10026592 3300009177 Bacteria 6436
62 Ga0105237_10095673 3300009545 Bacteria 2959
63 Ga0105238_10009316 3300009551 Bacteria 9832
64 Ga0105246_10006212 3300011119 Bacteria 7292
65 Ga0157370_10104585 3300013104 Bacteria 2650
66 Ga0157369_10040801 3300013105 Bacteria 5067
67 Ga0157375_10009670 3300013308 Bacteria 8477
68 Ga0163163_10027630 3300014325 Bacteria 5437
69 Ga0163163_10079030 3300014325 Bacteria 3287
70 Ga0157377_10003913 3300014745 Bacteria 6789
71 Ga0157379_10050618 3300014968 Bacteria 3709
72 Ga0157376_10023746 3300014969 Bacteria 4804
73 Ga0207688_10006378 3300025901 Bacteria 6424
74 Ga0207680_10006962 3300025903 Bacteria 5485
75 Ga0207645_10028417 3300025907 Bacteria 3610
76 Ga0207643_10000117 3300025908 Bacteria 54338
77 Ga0207705_10001002 3300025909 Bacteria 22949
78 Ga0207705_10014587 3300025909 Bacteria 5654
79 Ga0207707_10008686 3300025912 Bacteria 8816
80 Ga0207671_10062216 3300025914 Bacteria 2771
81 Ga0207693_10111779 3300025915 Bacteria 2143
82 Ga0207660_10004076 3300025917 Bacteria 9523
83 Ga0207660_10022881 3300025917 Bacteria 4214
84 Ga0207657_10032924 3300025919 Bacteria 4676
85 Ga0207649_10004759 3300025920 Bacteria 7345
86 Ga0207652_10010926 3300025921 Bacteria 7319
87 Ga0207650_10000493 3300025925 Bacteria 32882
88 Ga0207700_10086429 3300025928 Bacteria 2464
89 Ga0207664_10065396 3300025929 Bacteria 2911
90 Ga0207664_10145244 3300025929 Bacteria 2011
91 Ga0207644_10010068 3300025931 Bacteria 6226
92 Ga0207691_10036170 3300025940 Bacteria 4575
93 Ga0207689_10003659 3300025942 Bacteria 14022
94 Ga0207689_10198273 3300025942 Bacteria 1657
95 Ga0207661_10002931 3300025944 Bacteria 11798
96 Ga0207679_10005688 3300025945 Bacteria 7816
97 Ga0207679_10073865 3300025945 Bacteria 2582
98 Ga0207668_10109990 3300025972 Bacteria 2065
99 Ga0207640_10007040 3300025981 Bacteria 6192
100 Ga0207658_10026261 3300025986 Bacteria 4082
101 Ga0207658_10094689 3300025986 Bacteria 2325
102 Ga0207677_10005351 3300026023 Bacteria 6962
103 Ga0207703_10032329 3300026035 Bacteria 4141
104 Ga0207703_10143767 3300026035 Bacteria 2073
105 Ga0207678_10002534 3300026067 Bacteria 16655
106 Ga0207702_10003380 3300026078 Bacteria 14627
107 Ga0207702_10005030 3300026078 Bacteria 11615
108 Ga0207641_10019313 3300026088 Bacteria 5592
109 Ga0207676_10002038 3300026095 Bacteria 14686
110 Ga0207676_10062957 3300026095 Bacteria 2944
111 Ga0207674_10166359 3300026116 Bacteria 2159
112 Ga0207674_10340185 3300026116 Bacteria 1451
113 Ga0207683_10001487 3300026121 Bacteria 21129
114 Ga0207698_10006431 3300026142 Bacteria 7334
115 Ga0207428_10005528 3300027907 Bacteria 11776
116 Ga0268266_10007150 3300028379 Bacteria 10113
117 Ga0268264_10074966 3300028381 Bacteria 2875
118 Ga0268264_10151869 3300028381 Bacteria 2077
119 Ga0307517_10028006 3300028786 Bacteria 6741
120 Ga0307515_10005869 3300028794 Bacteria 24767
121 Ga0307515_10049163 3300028794 Bacteria 6355
122 Ga0307515_10207614 3300028794 Bacteria 1813
123 Ga0307512_10002709 3300030522 Bacteria 21746
124 Ga0307512_10029023 3300030522 Bacteria 4839
125 Ga0265325_10006108 3300031241 Bacteria 7355
126 Ga0265325_10043668 3300031241 Bacteria 2338
127 Ga0307513_10031225 3300031456 Bacteria 6038
128 Ga0307408_100018741 3300031548 Bacteria 4651
129 Ga0307408_100060068 3300031548 Bacteria 2770
130 Ga0307508_10000877 3300031616 Bacteria 35003
131 Ga0307508_10003704 3300031616 Bacteria 15321
132 Ga0316576_10009042 3300031727 Bacteria 6407
133 Ga0316578_10031062 3300031728 Bacteria 3041
134 Ga0307516_10065920 3300031730 Bacteria 3495
135 Ga0307516_10067323 3300031730 Bacteria 3451
136 Ga0307405_10012626 3300031731 Bacteria 4482
137 Ga0307405_10028146 3300031731 Bacteria 3269
138 Ga0307405_10035307 3300031731 Bacteria 2985
139 Ga0307405_10102425 3300031731 Bacteria 1923
140 Ga0307413_10008818 3300031824 Bacteria 4788
141 Ga0307413_10055232 3300031824 Bacteria 2415
142 Ga0307410_10034005 3300031852 Bacteria 3297
143 Ga0307410_10150256 3300031852 Bacteria 1733
144 Ga0307406_10011175 3300031901 Bacteria 5088
145 Ga0307406_10059897 3300031901 Bacteria 2453
146 Ga0307406_10104962 3300031901 Bacteria 1932
147 Ga0307412_10030817 3300031911 Bacteria 3382
148 Ga0307416_100002167 3300032002 Bacteria 11124
149 Ga0307416_100300819 3300032002 Bacteria 1594
150 Ga0307411_10065665 3300032005 Bacteria 2435
151 Ga0307415_100000007 3300032126 Bacteria 94604
152 Ga0307415_100099236 3300032126 Bacteria 2131
153 Ga0307415_100165383 3300032126 Bacteria 1719
154 Ga0307507_10020549 3300033179 Bacteria 7390
155 Ga0373950_0018263 3300034818 Bacteria 1216
156 Ga0373951_0000141 3300035091 Bacteria 26805
157 Ga0373942_0000058 3300035207 Bacteria 22888
158 Ga0373962_0003122 3300035242 Bacteria 3971
159 Ga0395900_0003120 3300037418 Bacteria 17993
160 Ga0395898_0004039 3300037466 Bacteria 16140
161 Ga0395905_0051735 3300037471 Bacteria 3847
162 Ga0466961_0000710 3300044693 Bacteria 20961
163 Ga0466963_0085023 3300044694 Bacteria 2147
164 Ga0466967_0143154 3300045976 Bacteria 2228
165 Ga0466967_0221090 3300045976 Bacteria 1800
166 Ga0466967_0450261 3300045976 Bacteria 1258
167 Ga0496100_0011740 3300048903 Bacteria 4995
168 Ga0496104_0022620 3300048907 Bacteria 5773
169 Ga0496105_0006487 3300048908 Bacteria 8996
170 Ga0496106_0009625 3300048909 Bacteria 7137
171 Ga0496107_0007186 3300048910 Bacteria 7672
172 Ga0496108_0006539 3300048911 Bacteria 9451
173 Ga0496109_0116123 3300048912 Bacteria 2490
174 Ga0496110_0001966 3300048913 Bacteria 15272
175 Ga0496110_0008740 3300048913 Bacteria 8157
176 Ga0496111_0000337 3300048914 Bacteria 23353
177 Ga0496111_0137904 3300048914 Bacteria 1807
178 Ga0496112_0010268 3300048915 Bacteria 8488
179 Ga0496112_0050979 3300048915 Bacteria 4059
180 Ga0496113_0063568 3300048916 Bacteria 2789
181 Ga0501034_0231687 3300049571 Bacteria 1796
182 Ga0501036_0248284 3300049572 Bacteria 1492
183 Ga0501036_0319030 3300049572 Bacteria 1298
184 Ga0501037_0064005 3300049573 Bacteria 2681
185 Ga0501037_0159888 3300049573 Bacteria 1606
186 Ga0501039_0059080 3300049575 Bacteria 2970
187 Ga0501040_0179873 3300049576 Bacteria 1499
188 Ga0501046_0016428 3300049580 Bacteria 6200
189 Ga0501047_0066807 3300049581 Bacteria 3466
190 Ga0501047_0168805 3300049581 Bacteria 2058
191 Ga0501070_0006558 3300049586 Bacteria 9903
192 Ga0501070_0013121 3300049586 Bacteria 6983
193 Ga0501070_0014733 3300049586 Bacteria 6579
194 Ga0501070_0098579 3300049586 Bacteria 2417
195 Ga0501073_0032986 3300049589 Bacteria 3690
196 Ga0501074_0001314 3300049590 Bacteria 16492
197 Ga0501074_0010429 3300049590 Bacteria 6743
198 Ga0501079_0007475 3300049741 Bacteria 8263
199 Ga0501080_0099537 3300049742 Bacteria 2698
200 Ga0501080_0140456 3300049742 Bacteria 2233
201 Ga0501080_0183600 3300049742 Bacteria 1924
202 Ga0501044_0084769 3300049823 Bacteria 3202
203 Ga0501044_0098383 3300049823 Bacteria 2945
204 Ga0501044_0116850 3300049823 Bacteria 2672
205 nmdc:mga00v17_101790_c1 3300050491 Bacteria 1814
206 nmdc:mga05p37_140537_c1 3300050507 Bacteria 2958
207 nmdc:mga05p37_24_c1 3300050507 Bacteria 118187
208 nmdc:mga09592_266834_c1 3300050508 Bacteria 1485
209 nmdc:mga09592_2_c1 3300050508 Bacteria 168133
210 nmdc:mga0qj67_4829_c1 3300050509 Bacteria 9797
211 nmdc:mga0qj67_57_c1 3300050509 Bacteria 27021
212 nmdc:mga06r32_21193_c1 3300050510 Bacteria 5998
213 nmdc:mga06r32_22_c2 3300050510 Bacteria 39510
214 nmdc:mga08y16_13557_c1 3300050511 Bacteria 8580
215 nmdc:mga0n895_6201_c1 3300050512 Bacteria 10113
216 nmdc:mga0rr50_4643_c1 3300050513 Bacteria 8095
217 nmdc:mga08x19_11113_c1 3300050514 Bacteria 5420
218 nmdc:mga0a205_10149_c1 3300050515 Bacteria 8647
219 Ga0500644_0025156 3300053088 Bacteria 1828
220 Ga0500646_0000446 3300053090 Bacteria 12254
221 Ga0500641_0051468 3300053096 Bacteria 1695
222 Ga0501084_0265268 3300054114 Bacteria 1450
223 2753262555 2751185782 Bacteria 11227053
224 2501940834 2501939600 Bacteria 6907073
225 2515494233 2515154088 Bacteria 5526283
226 2515722089 2515154129 Bacteria 5584369
227 2515758153 2515154137 Bacteria 5711575
228 2516085687 2515154202 Bacteria 5471270
229 2516090522 2515154203 Bacteria 5458536
230 2548697552 2547132424 Bacteria 8348532
231 2552109129 2551306166 Bacteria 9731570
232 2623587417 2622736626 Bacteria 7181580
233 2644512729 2643221692 Bacteria 7282860
234 2676482005 2675903059 Bacteria 8644972
235 2739361964 2738543034 Bacteria 6084756
236 2772647510 2772190715 Bacteria 6959372
237 2855672886 2855670206 Bacteria 7120389
238 2855677342 2855676851 Bacteria 7063653
239 2855686092 2855683550 Bacteria 7134265
240 2856861286 2856858025 Bacteria 7255264
241 2857290080 2857288857 Bacteria 7189066
242 2858855519 2858848962 Bacteria 6963058
243 2858885388 2858882152 Bacteria 7230291
244 2858892288 2858888857 Bacteria 7060307
245 2858902125 2858895516 Bacteria 7378898
246 2858903989 2858902515 Bacteria 7086037
247 2866068500 2866065130 Bacteria 6518152
248 2867305769 2867302475 Bacteria 7087181
249 2867315438 2867312974 Bacteria 7058875
250 2867325566 2867319477 Bacteria 7069771
251 2867510301 2867507094 Bacteria 6506033
252 2869050311 2869048445 Bacteria 6875584
253 2869063140 2869061728 Bacteria 7112407
254 2869072366 2869068681 Bacteria 7205615
255 2880492817 2880489317 Bacteria 7096270
256 2880499492 2880495981 Bacteria 7340502
257 2902587785 2902582711 Bacteria 6187705
258 2919719563 2919713450 Bacteria 7431245
259 2929221462 2929219909 Bacteria 6984360
260 2929228093 2929226422 Bacteria 7248583
261 2974317456 2974315732 Bacteria 4602776
262 2984525666 2984523437 Bacteria 4508481
263 2996226806 2996221748 Bacteria 6799777
264 649812042 649633069 Bacteria 6962533
265 8003831009 8003830390 Bacteria 6541657
266 8003862661 8003856774 Bacteria 7675274
267 8054706043 8054704163 Bacteria 7247792
268 8054732140 8054727385 Bacteria 7558670
269 8054740989 8054734606 Bacteria 6947278
270 8055416041 8055412473 Bacteria 6257500
271 Ga0070658_10001256
272 Ga0070658_10013001
273 Ga0070670_100008713
274 Ga0068869_100024004
275 Ga0070680_100013769
276 Ga0070680_100164894
277 Ga0070680_100279362
278 Ga0070682_100001030
279 Ga0070660_100009704
280 Ga0070660_100053682
281 Ga0070661_100119204
282 Ga0070692_10005211
283 Ga0070668_100017919
284 Ga0070675_100007762
285 Ga0070671_100017462
286 Ga0070714_100166644
287 Ga0070713_100001950
288 Ga0070663_100026287
289 Ga0070678_100003759
290 Ga0070679_100007435
291 Ga0070684_100026733
292 Ga0070672_100062508
293 Ga0070665_100013461
294 Ga0070664_100083214
295 Ga0068854_100032900
296 Ga0068856_100097789
297 Ga0068856_100127788
298 Ga0070702_100000119
299 Ga0068852_100004358
300 Ga0068859_100024624
301 Ga0068864_100016905
302 Ga0068851_10003025
303 Ga0068870_10001727
304 Ga0068863_100051696
305 Ga0068863_100156657
306 Ga0068858_100026751
307 Ga0068860_100040410
308 Ga0068860_100061252
309 Ga0081539_10000168
310 Ga0081539_10001076
311 Ga0081539_10008189
312 Ga0070717_10127236
313 Ga0097621_100013502
314 Ga0075428_100001203
315 Ga0075428_100040796
316 Ga0075430_100014536
317 Ga0075431_100193691
318 Ga0075433_10007349
319 Ga0075434_100015194
320 Ga0075429_100003629
321 Ga0075429_100038013
322 Ga0075436_100003248
323 Ga0097620_100024624
324 Ga0075435_100006362
325 Ga0105240_10040844
326 Ga0111539_10200101
327 Ga0105245_10002680
328 Ga0114129_10020264
329 Ga0105243_10002769
330 Ga0105241_10008093
331 Ga0105248_10026592
332 Ga0105237_10095673
333 Ga0105238_10009316
334 Ga0105246_10006212
335 Ga0157370_10104585
336 Ga0157369_10040801
337 Ga0157375_10009670
338 Ga0163163_10027630
339 Ga0163163_10079030
340 Ga0157377_10003913
341 Ga0157379_10050618
342 Ga0157376_10023746
343 Ga0207688_10006378
344 Ga0207680_10006962
345 Ga0207645_10028417
346 Ga0207643_10000117
347 Ga0207705_10001002
348 Ga0207705_10014587
349 Ga0207707_10008686
350 Ga0207671_10062216
351 Ga0207693_10111779
352 Ga0207660_10004076
353 Ga0207660_10022881
354 Ga0207657_10032924
355 Ga0207649_10004759
356 Ga0207652_10010926
357 Ga0207650_10000493
358 Ga0207700_10086429
359 Ga0207664_10065396
360 Ga0207664_10145244
361 Ga0207644_10010068
362 Ga0207691_10036170
363 Ga0207689_10003659
364 Ga0207689_10198273
365 Ga0207661_10002931
366 Ga0207679_10005688
367 Ga0207679_10073865
368 Ga0207668_10109990
369 Ga0207640_10007040
370 Ga0207658_10026261
371 Ga0207658_10094689
372 Ga0207677_10005351
373 Ga0207703_10032329
374 Ga0207703_10143767
375 Ga0207678_10002534
376 Ga0207702_10003380
377 Ga0207702_10005030
378 Ga0207641_10019313
379 Ga0207676_10002038
380 Ga0207676_10062957
381 Ga0207674_10166359
382 Ga0207674_10340185
383 Ga0207683_10001487
384 Ga0207698_10006431
385 Ga0207428_10005528
386 Ga0268266_10007150
387 Ga0268264_10074966
388 Ga0268264_10151869
389 Ga0307517_10028006
390 Ga0307515_10005869
391 Ga0307515_10049163
392 Ga0307515_10207614
393 Ga0307512_10002709
394 Ga0307512_10029023
395 Ga0265325_10006108
396 Ga0265325_10043668
397 Ga0307513_10031225
398 Ga0307408_100018741
399 Ga0307408_100060068
400 Ga0307508_10000877
401 Ga0307508_10003704
402 Ga0316576_10009042
403 Ga0316578_10031062
404 Ga0307516_10065920
405 Ga0307516_10067323
406 Ga0307405_10012626
407 Ga0307405_10028146
408 Ga0307405_10035307
409 Ga0307405_10102425
410 Ga0307413_10008818
411 Ga0307413_10055232
412 Ga0307410_10034005
413 Ga0307410_10150256
414 Ga0307406_10011175
415 Ga0307406_10059897
416 Ga0307406_10104962
417 Ga0307412_10030817
418 Ga0307416_100002167
419 Ga0307416_100300819
420 Ga0307411_10065665
421 Ga0307415_100000007
422 Ga0307415_100099236
423 Ga0307415_100165383
424 Ga0307507_10020549
425 Ga0373950_0018263
426 Ga0373951_0000141
427 Ga0373942_0000058
428 Ga0373962_0003122
429 Ga0395900_0003120
430 Ga0395898_0004039
431 Ga0395905_0051735
432 Ga0466961_0000710
433 Ga0466963_0085023
434 Ga0466967_0143154
435 Ga0466967_0221090
436 Ga0466967_0450261
437 Ga0496100_0011740
438 Ga0496104_0022620
439 Ga0496105_0006487
440 Ga0496106_0009625
441 Ga0496107_0007186
442 Ga0496108_0006539
443 Ga0496109_0116123
444 Ga0496110_0001966
445 Ga0496110_0008740
446 Ga0496111_0000337
447 Ga0496111_0137904
448 Ga0496112_0010268
449 Ga0496112_0050979
450 Ga0496113_0063568
451 Ga0501034_0231687
452 Ga0501036_0248284
453 Ga0501036_0319030
454 Ga0501037_0064005
455 Ga0501037_0159888
456 Ga0501039_0059080
457 Ga0501040_0179873
458 Ga0501046_0016428
459 Ga0501047_0066807
460 Ga0501047_0168805
461 Ga0501070_0006558
462 Ga0501070_0013121
463 Ga0501070_0014733
464 Ga0501070_0098579
465 Ga0501073_0032986
466 Ga0501074_0001314
467 Ga0501074_0010429
468 Ga0501079_0007475
469 Ga0501080_0099537
470 Ga0501080_0140456
471 Ga0501080_0183600
472 Ga0501044_0084769
473 Ga0501044_0098383
474 Ga0501044_0116850
475 nmdc:mga00v17_101790_c1
476 nmdc:mga05p37_140537_c1
477 nmdc:mga05p37_24_c1
478 nmdc:mga09592_266834_c1
479 nmdc:mga09592_2_c1
480 nmdc:mga0qj67_4829_c1
481 nmdc:mga0qj67_57_c1
482 nmdc:mga06r32_21193_c1
483 nmdc:mga06r32_22_c2
484 nmdc:mga08y16_13557_c1
485 nmdc:mga0n895_6201_c1
486 nmdc:mga0rr50_4643_c1
487 nmdc:mga08x19_11113_c1
488 nmdc:mga0a205_10149_c1
489 Ga0500644_0025156
490 Ga0500646_0000446
491 Ga0500641_0051468
492 Ga0501084_0265268
493 2753262555
494 2501940834
495 2515494233
496 2515722089
497 2515758153
498 2516085687
499 2516090522
500 2548697552
501 2552109129
502 2623587417
503 2644512729
504 2676482005
505 2739361964
506 2772647510
507 2855672886
508 2855677342
509 2855686092
510 2856861286
511 2857290080
512 2858855519
513 2858885388
514 2858892288
515 2858902125
516 2858903989
517 2866068500
518 2867305769
519 2867315438
520 2867325566
521 2867510301
522 2869050311
523 2869063140
524 2869072366
525 2880492817
526 2880499492
527 2902587785
528 2919719563
529 2929221462
530 2929228093
531 2974317456
532 2984525666
533 2996226806
534 649812042
535 8003831009
536 8003862661
537 8054706043
538 8054732140
539 8054740989
540 8055416041

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18305

DNA_pol_A_exoN

3' to 5' exonuclease C-terminal domain

349

427

0.99

PF00570

HRDC

HRDC domain

263

330

0.96

PF01612

DNA_pol_A_exo1

3'-5' exonuclease

53

219

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c0x-assembly1.cif.gz_K structure of a 12-subunit nuclear exosome complex bound to structured rna 0.8627 24 210
5dku-assembly1.cif.gz_A c-terminal his tagged appol exonuclease mutant 0.8561 44 210
5dkt-assembly1.cif.gz_A n-terminal his tagged appol exonuclease mutant 0.8511 44 210
7mpr-assembly2.cif.gz_B brucella melitensis nrnc 0.848 50 210
7sxq-assembly2.cif.gz_B plasmodium falciparum apicoplast dna polymerase (exo-minus) without affinity tag 0.8477 51 210
ID Description Score Start End Superfamily
3cymA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9562 17 210 3.30.420.10
af_I6XF17_15_224_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9493 17 210 3.30.420.10
3cymA03 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.8944 318 404 1.10.150.80
3cymA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8936 17 210 3.30.420.10
af_I6XF17_332_429_1.10.150.80 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.883 317 409 1.10.150.80
ID Description Score Start End GO Terms
AF-A0A7K2N1A3-F1-model_v4 Ribonuclease D 0.9862 318 404
AF-A0A132NJZ5-F1-model_v4 3'-5' exonuclease 0.9831 317 404 GO:0004527
AF-A0A3M2IRL1-F1-model_v4 Ribonuclease D 0.979 317 404
AF-A0A545BDT0-F1-model_v4 Ribonuclease D 0.9763 317 404
AF-A0A7K2NYG6-F1-model_v4 Ribonuclease D 0.9606 20 217 GO:0003676
GO:0006139
GO:0008408

Map