F376851
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 270 | 166 | 540 | 298 |
Family's Representative Sequence
| Representative Sequence | 3300006058|Ga0075432_10001160|Ga0075432_1000116010 |
| Length | 279 |
| Sequence | MTSAGRFAPSPSGELHVGNLRTAILAWLFARSTGRRFLMRVEDLDRARAGAEAEQLRDLAAVGVTWDGGVVRQTEREPLYFCTRREIQEAPSAPHAPQGAYPGTCRNLDPAELEFKRTIRPAAVRLRSAVTGWTVEDLLHGTYTGVVDDFVLRRNDGVTAYNLAVVVDDAAQGIDQVVRGDDLLPSTPRQAYLASLLNIPVPEYAHVPLVVNSDGARLAKRDGAVTLADLADAGLDAGRVRDIILESLGLPPGPLPRVLPSFDPSALPREPWVWPGVPG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 2 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 3 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 4 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 14 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 15 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 16 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 17 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 18 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 19 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 20 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 33 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 36 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 52 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 53 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 54 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 55 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 56 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 57 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 58 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 59 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 60 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 61 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 62 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 63 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 64 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 65 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 66 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 67 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 68 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 69 | 3300041405 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 | Metagenome | Rhizosphere |
| 70 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 71 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 72 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 73 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 74 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 75 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 76 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 77 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 78 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 79 | 3300042121 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 | Metagenome | Rhizosphere |
| 80 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 81 | 3300042146 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 | Metagenome | Rhizosphere |
| 82 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 83 | 3300042185 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 | Metagenome | Rhizosphere |
| 84 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 85 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 86 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 87 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 110 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 111 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 112 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 113 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 115 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 116 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 117 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 118 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 119 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 120 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 121 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 122 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 132 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 136 | 2537561592 | Arthrobacter crystallopoietes BAB-32 | Isolate | Rhizosphere |
| 137 | 2690315906 | Arthrobacter sp. OY3WO11 | Isolate | Unclassified |
| 138 | 2775506735 | Arthrobacter sp. S95 1704 | Isolate | Unclassified |
| 139 | 2808606357 | Arthrobacter sp. SLBN-122 | Isolate | Unclassified |
| 140 | 2808606360 | Arthrobacter sp. SLBN-112 | Isolate | Unclassified |
| 141 | 2808606366 | Arthrobacter sp. SLBN-83 | Isolate | Unclassified |
| 142 | 2808606370 | Arthrobacter sp. SLBN-100 | Isolate | Unclassified |
| 143 | 2811994871 | Arthrobacter sp. SLBN-179 | Isolate | Unclassified |
| 144 | 2844849076 | Arthrobacter cupressi DSM 24664 | Isolate | Rhizosphere |
| 145 | 2857740372 | Paenarthrobacter sp. R-74611 | Isolate | Unclassified |
| 146 | 2904497146 | Arthrobacter sp. 1276 | Isolate | Rhizosphere |
| 147 | 2904776348 | Paenarthrobacter sp. 1092 | Isolate | Rhizosphere |
| 148 | 2910809715 | Paenarthrobacter sp. CM16 | Isolate | Unclassified |
| 149 | 2919034639 | Paenarthrobacter nitroguajacolicus 247 | Isolate | Rhizosphere |
| 150 | 2919051321 | Sinomonas atrocyanea 1003 | Isolate | Rhizosphere |
| 151 | 2919059106 | Arthrobacter sp. 1088 | Isolate | Rhizosphere |
| 152 | 2919391150 | Arthrobacter ipis 2973 | Isolate | Unclassified |
| 153 | 2919538618 | Paenarthrobacter nitroguajacolicus 3945 | Isolate | Unclassified |
| 154 | 2932426870 | Paenarthrobacter sp. 4246 | Isolate | Rhizosphere |
| 155 | 2933418574 | Jeotgalibacillus campisalis 4120 | Isolate | Rhizosphere |
| 156 | 2939598168 | Arthrobacter sp. 754 | Isolate | Rhizosphere |
| 157 | 2939647034 | Arthrobacter sp. 2762 | Isolate | Rhizosphere |
| 158 | 2939674588 | Arthrobacter bambusae 3552 | Isolate | Rhizosphere |
| 159 | 2945916053 | Arthrobacter ulcerisalmonis W1I2 | Isolate | Rhizosphere |
| 160 | 2945920336 | Pseudarthrobacter siccitolerans W1I3 | Isolate | Rhizosphere |
| 161 | 2945941187 | Arthrobacter pascens W1I14 | Isolate | Rhizosphere |
| 162 | 2945956166 | Arthrobacter globiformus W2I3 | Isolate | Rhizosphere |
| 163 | 2946037020 | Arthrobacter sp. W4I7 | Isolate | Rhizosphere |
| 164 | 2946059875 | Arthrobacter sp. SLBN-112 | Isolate | Rhizosphere |
| 165 | 2953998280 | Pseudarthrobacter sp. W1I19 | Isolate | Rhizosphere |
| 166 | 2974302888 | Pseudarthrobacter sp. SORGH_AS 212 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.52 |
| Metatranscriptomes | 0 |
| Isolates | 11.48 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.85 |
| Nodule | 0 |
| Rhizoplane | 6.3 |
| Rhizosphere | 85.93 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0075432_10001160 | 3300006058 | Bacteria | 8435 |
| 2 | JGI25152J39213_1000109 | 3300002773 | Bacteria | 57724 |
| 3 | rootH1_10030943 | 3300003316 | Bacteria | 4383 |
| 4 | Ga0070670_100076549 | 3300005331 | Bacteria | 2875 |
| 5 | Ga0070677_10010873 | 3300005333 | Bacteria | 3124 |
| 6 | Ga0070666_10006727 | 3300005335 | Bacteria | 7077 |
| 7 | Ga0070669_100022550 | 3300005353 | Bacteria | 4502 |
| 8 | Ga0070674_100018880 | 3300005356 | Bacteria | 4369 |
| 9 | Ga0070673_100015259 | 3300005364 | Bacteria | 5389 |
| 10 | Ga0070659_100014719 | 3300005366 | Bacteria | 5850 |
| 11 | Ga0070667_100016248 | 3300005367 | Bacteria | 6156 |
| 12 | Ga0070672_100070033 | 3300005543 | Bacteria | 2786 |
| 13 | Ga0068861_100251294 | 3300005719 | Bacteria | 1509 |
| 14 | Ga0081455_10009709 | 3300005937 | Bacteria | 9868 |
| 15 | Ga0081455_10020484 | 3300005937 | Bacteria | 6224 |
| 16 | Ga0075432_10011445 | 3300006058 | Bacteria | 3013 |
| 17 | Ga0075431_100008999 | 3300006847 | Bacteria | 10009 |
| 18 | Ga0075433_10002108 | 3300006852 | Bacteria | 15082 |
| 19 | Ga0075429_100130965 | 3300006880 | Bacteria | 2194 |
| 20 | Ga0068865_100138108 | 3300006881 | Bacteria | 1834 |
| 21 | Ga0075435_100000845 | 3300007076 | Bacteria | 19133 |
| 22 | Ga0105251_10009547 | 3300009011 | Bacteria | 5720 |
| 23 | Ga0111539_10011313 | 3300009094 | Bacteria | 11206 |
| 24 | Ga0105245_10022014 | 3300009098 | Bacteria | 5594 |
| 25 | Ga0114129_10053064 | 3300009147 | Bacteria | 5687 |
| 26 | Ga0105248_10063893 | 3300009177 | Bacteria | 4132 |
| 27 | Ga0105249_10045867 | 3300009553 | Bacteria | 3977 |
| 28 | Ga0105246_10002653 | 3300011119 | Bacteria | 10835 |
| 29 | Ga0105246_10002767 | 3300011119 | Bacteria | 10614 |
| 30 | Ga0105246_10009328 | 3300011119 | Bacteria | 6044 |
| 31 | Ga0157373_10014680 | 3300013100 | Bacteria | 5739 |
| 32 | Ga0157369_10041659 | 3300013105 | Bacteria | 5012 |
| 33 | Ga0157369_10296958 | 3300013105 | Bacteria | 1681 |
| 34 | Ga0163162_10081541 | 3300013306 | Bacteria | 3306 |
| 35 | Ga0157372_10237746 | 3300013307 | Bacteria | 2113 |
| 36 | Ga0157375_10363221 | 3300013308 | Bacteria | 1614 |
| 37 | Ga0182008_10163704 | 3300014497 | Bacteria | 1120 |
| 38 | Ga0163161_10050203 | 3300017792 | Bacteria | 3018 |
| 39 | Ga0163161_10108561 | 3300017792 | Bacteria | 2072 |
| 40 | Ga0209148_1003076 | 3300025254 | Bacteria | 4902 |
| 41 | Ga0209129_1000180 | 3300025258 | Bacteria | 90882 |
| 42 | Ga0209025_1001362 | 3300025294 | Bacteria | 32778 |
| 43 | Ga0209051_1013646 | 3300025303 | Bacteria | 3850 |
| 44 | Ga0207697_10002111 | 3300025315 | Bacteria | 10433 |
| 45 | Ga0207697_10004819 | 3300025315 | Bacteria | 6374 |
| 46 | Ga0207655_1012294 | 3300025728 | Bacteria | 5017 |
| 47 | Ga0207655_1013553 | 3300025728 | Bacteria | 4672 |
| 48 | Ga0207655_1024983 | 3300025728 | Bacteria | 2913 |
| 49 | Ga0207682_10000747 | 3300025893 | Bacteria | 15055 |
| 50 | Ga0207645_10000843 | 3300025907 | Bacteria | 25581 |
| 51 | Ga0207645_10206648 | 3300025907 | Bacteria | 1293 |
| 52 | Ga0207681_10021886 | 3300025923 | Bacteria | 4070 |
| 53 | Ga0207687_10172124 | 3300025927 | Bacteria | 1671 |
| 54 | Ga0207644_10008918 | 3300025931 | Bacteria | 6571 |
| 55 | Ga0207690_10030402 | 3300025932 | Bacteria | 3445 |
| 56 | Ga0207669_10024442 | 3300025937 | Bacteria | 3247 |
| 57 | Ga0207691_10010743 | 3300025940 | Bacteria | 8788 |
| 58 | Ga0207668_10134181 | 3300025972 | Bacteria | 1895 |
| 59 | Ga0207668_10152059 | 3300025972 | Bacteria | 1793 |
| 60 | Ga0207675_100313771 | 3300026118 | Bacteria | 1529 |
| 61 | Ga0207683_10006815 | 3300026121 | Bacteria | 9781 |
| 62 | Ga0207428_10008236 | 3300027907 | Bacteria | 9426 |
| 63 | Ga0307408_100009546 | 3300031548 | Bacteria | 6401 |
| 64 | Ga0307408_100026368 | 3300031548 | Bacteria | 3991 |
| 65 | Ga0307408_100034192 | 3300031548 | Bacteria | 3558 |
| 66 | Ga0307408_100034721 | 3300031548 | Bacteria | 3534 |
| 67 | Ga0307408_100053051 | 3300031548 | Bacteria | 2926 |
| 68 | Ga0307408_100059177 | 3300031548 | Bacteria | 2788 |
| 69 | Ga0307408_100065608 | 3300031548 | Bacteria | 2663 |
| 70 | Ga0307408_100122261 | 3300031548 | Bacteria | 2018 |
| 71 | Ga0307408_100127273 | 3300031548 | Bacteria | 1982 |
| 72 | Ga0307408_100165163 | 3300031548 | Bacteria | 1762 |
| 73 | Ga0307408_100343627 | 3300031548 | Bacteria | 1264 |
| 74 | Ga0307405_10001802 | 3300031731 | Bacteria | 9165 |
| 75 | Ga0307405_10012185 | 3300031731 | Bacteria | 4539 |
| 76 | Ga0307405_10101575 | 3300031731 | Bacteria | 1930 |
| 77 | Ga0307405_10105642 | 3300031731 | Bacteria | 1897 |
| 78 | Ga0307405_10113649 | 3300031731 | Bacteria | 1839 |
| 79 | Ga0307405_10114571 | 3300031731 | Bacteria | 1832 |
| 80 | Ga0307405_10149022 | 3300031731 | Bacteria | 1642 |
| 81 | Ga0307405_10150432 | 3300031731 | Bacteria | 1636 |
| 82 | Ga0307405_10302624 | 3300031731 | Bacteria | 1214 |
| 83 | Ga0307405_10556780 | 3300031731 | Bacteria | 929 |
| 84 | Ga0307413_10029834 | 3300031824 | Bacteria | 3057 |
| 85 | Ga0307413_10108244 | 3300031824 | Bacteria | 1854 |
| 86 | Ga0307413_10209142 | 3300031824 | Bacteria | 1415 |
| 87 | Ga0307413_10243946 | 3300031824 | Bacteria | 1328 |
| 88 | Ga0307413_10244315 | 3300031824 | Bacteria | 1327 |
| 89 | Ga0307413_10327389 | 3300031824 | Bacteria | 1173 |
| 90 | Ga0307413_10546810 | 3300031824 | Bacteria | 938 |
| 91 | Ga0307410_10003768 | 3300031852 | Bacteria | 7687 |
| 92 | Ga0307406_10038434 | 3300031901 | Bacteria | 2963 |
| 93 | Ga0307406_10048615 | 3300031901 | Bacteria | 2680 |
| 94 | Ga0307406_10079441 | 3300031901 | Bacteria | 2175 |
| 95 | Ga0307406_10198103 | 3300031901 | Bacteria | 1476 |
| 96 | Ga0307407_10070957 | 3300031903 | Bacteria | 2072 |
| 97 | Ga0307407_10073660 | 3300031903 | Bacteria | 2041 |
| 98 | Ga0307407_10126393 | 3300031903 | Bacteria | 1629 |
| 99 | Ga0307407_10189202 | 3300031903 | Bacteria | 1370 |
| 100 | Ga0307412_10033114 | 3300031911 | Bacteria | 3281 |
| 101 | Ga0307412_10042612 | 3300031911 | Bacteria | 2951 |
| 102 | Ga0307412_10088989 | 3300031911 | Bacteria | 2155 |
| 103 | Ga0307412_10104892 | 3300031911 | Bacteria | 2007 |
| 104 | Ga0307412_10202779 | 3300031911 | Bacteria | 1507 |
| 105 | Ga0307412_10308612 | 3300031911 | Bacteria | 1253 |
| 106 | Ga0307409_100020086 | 3300031995 | Bacteria | 4543 |
| 107 | Ga0307409_100028147 | 3300031995 | Bacteria | 3997 |
| 108 | Ga0307409_100149106 | 3300031995 | Bacteria | 2028 |
| 109 | Ga0307409_100156478 | 3300031995 | Bacteria | 1986 |
| 110 | Ga0307409_100179624 | 3300031995 | Bacteria | 1872 |
| 111 | Ga0307409_100189193 | 3300031995 | Bacteria | 1830 |
| 112 | Ga0307409_100243260 | 3300031995 | Bacteria | 1639 |
| 113 | Ga0307416_100016859 | 3300032002 | Bacteria | 5091 |
| 114 | Ga0307416_100029842 | 3300032002 | Bacteria | 4081 |
| 115 | Ga0307416_100039597 | 3300032002 | Bacteria | 3651 |
| 116 | Ga0307416_100067666 | 3300032002 | Bacteria | 2947 |
| 117 | Ga0307416_100133609 | 3300032002 | Bacteria | 2239 |
| 118 | Ga0307416_100149026 | 3300032002 | Bacteria | 2142 |
| 119 | Ga0307416_100189343 | 3300032002 | Bacteria | 1938 |
| 120 | Ga0307416_100403944 | 3300032002 | Bacteria | 1404 |
| 121 | Ga0307414_10018053 | 3300032004 | Bacteria | 4332 |
| 122 | Ga0307414_10215445 | 3300032004 | Bacteria | 1573 |
| 123 | Ga0307411_10146083 | 3300032005 | Bacteria | 1751 |
| 124 | Ga0307415_100005242 | 3300032126 | Bacteria | 6859 |
| 125 | Ga0307415_100016231 | 3300032126 | Bacteria | 4433 |
| 126 | Ga0307415_100173437 | 3300032126 | Bacteria | 1684 |
| 127 | Ga0395899_0006778 | 3300037312 | Bacteria | 8875 |
| 128 | Ga0395899_0059928 | 3300037312 | Bacteria | 2805 |
| 129 | Ga0395899_0083598 | 3300037312 | Bacteria | 2321 |
| 130 | Ga0395900_0048456 | 3300037418 | Bacteria | 4377 |
| 131 | Ga0395900_0128042 | 3300037418 | Bacteria | 2603 |
| 132 | Ga0395900_0151000 | 3300037418 | Bacteria | 2373 |
| 133 | Ga0395900_0200923 | 3300037418 | Bacteria | 2017 |
| 134 | Ga0395898_0001020 | 3300037466 | Bacteria | 43644 |
| 135 | Ga0395898_0083035 | 3300037466 | Bacteria | 3088 |
| 136 | Ga0395898_0224596 | 3300037466 | Bacteria | 1791 |
| 137 | Ga0395898_0280505 | 3300037466 | Bacteria | 1589 |
| 138 | Ga0395901_0005392 | 3300038443 | Bacteria | 12940 |
| 139 | Ga0395901_0039871 | 3300038443 | Bacteria | 4862 |
| 140 | Ga0395901_0105049 | 3300038443 | Bacteria | 2964 |
| 141 | Ga0395901_0171669 | 3300038443 | Bacteria | 2275 |
| 142 | Ga0439436_0001436 | 3300041404 | Bacteria | 6905 |
| 143 | Ga0439436_0012025 | 3300041404 | Bacteria | 2628 |
| 144 | Ga0439438_012694 | 3300041405 | Bacteria | 2572 |
| 145 | Ga0439438_016764 | 3300041405 | Bacteria | 2124 |
| 146 | Ga0439439_0003275 | 3300041406 | Bacteria | 3560 |
| 147 | Ga0439439_0003731 | 3300041406 | Bacteria | 3381 |
| 148 | Ga0439466_0010813 | 3300041411 | Bacteria | 3388 |
| 149 | Ga0439465_0048626 | 3300041413 | Bacteria | 1384 |
| 150 | Ga0439433_0000621 | 3300041999 | Bacteria | 6764 |
| 151 | Ga0439433_0006674 | 3300041999 | Bacteria | 2488 |
| 152 | Ga0439433_0011005 | 3300041999 | Bacteria | 1978 |
| 153 | Ga0439442_000193 | 3300042002 | Bacteria | 15523 |
| 154 | Ga0439442_008319 | 3300042002 | Bacteria | 2093 |
| 155 | Ga0439449_0000036 | 3300042007 | Bacteria | 39721 |
| 156 | Ga0439449_0006320 | 3300042007 | Bacteria | 4527 |
| 157 | Ga0439449_0063247 | 3300042007 | Bacteria | 1366 |
| 158 | Ga0439449_0065994 | 3300042007 | Bacteria | 1334 |
| 159 | Ga0439452_027645 | 3300042010 | Bacteria | 1422 |
| 160 | Ga0439457_001868 | 3300042014 | Bacteria | 6219 |
| 161 | Ga0439457_002655 | 3300042014 | Bacteria | 5046 |
| 162 | Ga0439457_003263 | 3300042014 | Bacteria | 4445 |
| 163 | Ga0439462_0045886 | 3300042015 | Bacteria | 1170 |
| 164 | Ga0450919_000236 | 3300042121 | Bacteria | 6210 |
| 165 | Ga0450920_000125 | 3300042122 | Bacteria | 10438 |
| 166 | Ga0450920_005321 | 3300042122 | Bacteria | 2283 |
| 167 | Ga0450907_000222 | 3300042146 | Bacteria | 19774 |
| 168 | Ga0450907_032280 | 3300042146 | Bacteria | 891 |
| 169 | Ga0439446_0006525 | 3300042156 | Bacteria | 3046 |
| 170 | Ga0450909_001160 | 3300042185 | Bacteria | 3648 |
| 171 | Ga0439434_0002880 | 3300042435 | Bacteria | 5023 |
| 172 | Ga0439434_0012430 | 3300042435 | Bacteria | 2518 |
| 173 | Ga0450918_001676 | 3300042531 | Bacteria | 4343 |
| 174 | Ga0466961_0097333 | 3300044693 | Bacteria | 1855 |
| 175 | Ga0495653_0030559 | 3300046463 | Bacteria | 4289 |
| 176 | Ga0495580_0217273 | 3300046472 | Bacteria | 1314 |
| 177 | Ga0495582_0113137 | 3300046473 | Bacteria | 1525 |
| 178 | Ga0495662_0011663 | 3300046476 | Bacteria | 4296 |
| 179 | Ga0495630_0252213 | 3300046517 | Bacteria | 1348 |
| 180 | Ga0495631_0038244 | 3300046518 | Bacteria | 2134 |
| 181 | Ga0495642_0074400 | 3300046528 | Bacteria | 1424 |
| 182 | Ga0495665_0011268 | 3300046531 | Bacteria | 4841 |
| 183 | Ga0495586_0074339 | 3300046535 | Bacteria | 1860 |
| 184 | Ga0495586_0219142 | 3300046535 | Bacteria | 1081 |
| 185 | Ga0495645_0001259 | 3300046543 | Bacteria | 17249 |
| 186 | Ga0495667_0029533 | 3300046559 | Bacteria | 3690 |
| 187 | Ga0495656_0092972 | 3300046615 | Bacteria | 1382 |
| 188 | Ga0495588_0009702 | 3300046674 | Bacteria | 4461 |
| 189 | Ga0495657_0060591 | 3300046675 | Bacteria | 2507 |
| 190 | Ga0495670_0005066 | 3300046691 | Bacteria | 6482 |
| 191 | Ga0495670_0027914 | 3300046691 | Bacteria | 2798 |
| 192 | Ga0495581_0012010 | 3300047315 | Bacteria | 5010 |
| 193 | Ga0495581_0125998 | 3300047315 | Bacteria | 1491 |
| 194 | Ga0495581_0131447 | 3300047315 | Bacteria | 1458 |
| 195 | Ga0495636_0035690 | 3300047318 | Bacteria | 2049 |
| 196 | Ga0495680_0282094 | 3300047322 | Bacteria | 1170 |
| 197 | Ga0495677_0023394 | 3300047445 | Bacteria | 2243 |
| 198 | Ga0495681_0066199 | 3300047470 | Bacteria | 1650 |
| 199 | Ga0495684_0148337 | 3300047471 | Bacteria | 1755 |
| 200 | Ga0495593_0067286 | 3300047673 | Bacteria | 1865 |
| 201 | Ga0496102_0047278 | 3300048905 | Bacteria | 3909 |
| 202 | Ga0496102_0186939 | 3300048905 | Bacteria | 1952 |
| 203 | Ga0496103_0013610 | 3300048906 | Bacteria | 4826 |
| 204 | Ga0496103_0243350 | 3300048906 | Bacteria | 1157 |
| 205 | Ga0496106_0138565 | 3300048909 | Bacteria | 1912 |
| 206 | Ga0496107_0020091 | 3300048910 | Bacteria | 4716 |
| 207 | Ga0496107_0175799 | 3300048910 | Bacteria | 1589 |
| 208 | Ga0496108_0374287 | 3300048911 | Bacteria | 1243 |
| 209 | Ga0496109_0050086 | 3300048912 | Bacteria | 3804 |
| 210 | Ga0496110_0174708 | 3300048913 | Bacteria | 1949 |
| 211 | Ga0496112_0204815 | 3300048915 | Bacteria | 1931 |
| 212 | Ga0496112_0313907 | 3300048915 | Bacteria | 1512 |
| 213 | Ga0496112_0517047 | 3300048915 | Bacteria | 1128 |
| 214 | Ga0496113_0057225 | 3300048916 | Bacteria | 2930 |
| 215 | Ga0496114_0023049 | 3300048917 | Bacteria | 5075 |
| 216 | Ga0496114_0182244 | 3300048917 | Bacteria | 1834 |
| 217 | Ga0496115_0048356 | 3300048918 | Bacteria | 3402 |
| 218 | Ga0496124_0126780 | 3300048927 | Bacteria | 2032 |
| 219 | Ga0496125_0090730 | 3300048928 | Bacteria | 2292 |
| 220 | Ga0496125_0165399 | 3300048928 | Bacteria | 1496 |
| 221 | Ga0501032_0003609 | 3300049569 | Bacteria | 11782 |
| 222 | Ga0501034_0000038 | 3300049571 | Bacteria | 237795 |
| 223 | Ga0501036_0024315 | 3300049572 | Bacteria | 5107 |
| 224 | Ga0501037_0009153 | 3300049573 | Bacteria | 7254 |
| 225 | Ga0501037_0009830 | 3300049573 | Bacteria | 7020 |
| 226 | Ga0501037_0187836 | 3300049573 | Bacteria | 1464 |
| 227 | Ga0501038_0093550 | 3300049574 | Bacteria | 2514 |
| 228 | Ga0501038_0239384 | 3300049574 | Bacteria | 1441 |
| 229 | Ga0501039_0014696 | 3300049575 | Bacteria | 5988 |
| 230 | Ga0501039_0058100 | 3300049575 | Bacteria | 2995 |
| 231 | Ga0501043_0057903 | 3300049579 | Bacteria | 3042 |
| 232 | Ga0501043_0163384 | 3300049579 | Bacteria | 1739 |
| 233 | Ga0501070_0201753 | 3300049586 | Bacteria | 1633 |
| 234 | Ga0501073_0146275 | 3300049589 | Bacteria | 1637 |
| 235 | Ga0501279_007124 | 3300049775 | Bacteria | 1484 |
| 236 | Ga0501044_0080488 | 3300049823 | Bacteria | 3300 |
| 237 | nmdc:mga05p37_48321_c1 | 3300050507 | Bacteria | 5234 |
| 238 | nmdc:mga08y16_228755_c1 | 3300050511 | Bacteria | 1924 |
| 239 | nmdc:mga0n895_42847_c1 | 3300050512 | Bacteria | 4407 |
| 240 | 2537900911 | 2537561592 | Bacteria | 4348607 |
| 241 | 2691511831 | 2690315906 | Bacteria | 4517044 |
| 242 | 2775657240 | 2775506735 | Bacteria | 4556596 |
| 243 | 2808829016 | 2808606357 | Bacteria | 4466944 |
| 244 | 2808850241 | 2808606360 | Bacteria | 4404006 |
| 245 | 2808877207 | 2808606366 | Bacteria | 4415912 |
| 246 | 2808893260 | 2808606370 | Bacteria | 4942454 |
| 247 | 2812319247 | 2811994871 | Bacteria | 4497550 |
| 248 | 2844850588 | 2844849076 | Bacteria | 4091819 |
| 249 | 2857744865 | 2857740372 | Bacteria | 4782044 |
| 250 | 2904499100 | 2904497146 | Bacteria | 4731781 |
| 251 | 2904780590 | 2904776348 | Bacteria | 4658726 |
| 252 | 2910809983 | 2910809715 | Bacteria | 4982797 |
| 253 | 2919039076 | 2919034639 | Bacteria | 4763403 |
| 254 | 2919051750 | 2919051321 | Bacteria | 4210889 |
| 255 | 2919060927 | 2919059106 | Bacteria | 4991624 |
| 256 | 2919392782 | 2919391150 | Bacteria | 4884741 |
| 257 | 2919541334 | 2919538618 | Bacteria | 4677069 |
| 258 | 2932430154 | 2932426870 | Bacteria | 4547726 |
| 259 | 2933422157 | 2933418574 | Bacteria | 4476724 |
| 260 | 2939601882 | 2939598168 | Bacteria | 4687164 |
| 261 | 2939649507 | 2939647034 | Bacteria | 4681660 |
| 262 | 2939678966 | 2939674588 | Bacteria | 4844420 |
| 263 | 2945917000 | 2945916053 | Bacteria | 4555517 |
| 264 | 2945922752 | 2945920336 | Bacteria | 4501603 |
| 265 | 2945945458 | 2945941187 | Bacteria | 4682474 |
| 266 | 2945956229 | 2945956166 | Bacteria | 5110334 |
| 267 | 2946041563 | 2946037020 | Bacteria | 4900426 |
| 268 | 2946060831 | 2946059875 | Bacteria | 4386623 |
| 269 | 2954002764 | 2953998280 | Bacteria | 4812144 |
| 270 | 2974305005 | 2974302888 | Bacteria | 4369871 |
| 271 | Ga0075432_10001160 | |||
| 272 | JGI25152J39213_1000109 | |||
| 273 | rootH1_10030943 | |||
| 274 | Ga0070670_100076549 | |||
| 275 | Ga0070677_10010873 | |||
| 276 | Ga0070666_10006727 | |||
| 277 | Ga0070669_100022550 | |||
| 278 | Ga0070674_100018880 | |||
| 279 | Ga0070673_100015259 | |||
| 280 | Ga0070659_100014719 | |||
| 281 | Ga0070667_100016248 | |||
| 282 | Ga0070672_100070033 | |||
| 283 | Ga0068861_100251294 | |||
| 284 | Ga0081455_10009709 | |||
| 285 | Ga0081455_10020484 | |||
| 286 | Ga0075432_10011445 | |||
| 287 | Ga0075431_100008999 | |||
| 288 | Ga0075433_10002108 | |||
| 289 | Ga0075429_100130965 | |||
| 290 | Ga0068865_100138108 | |||
| 291 | Ga0075435_100000845 | |||
| 292 | Ga0105251_10009547 | |||
| 293 | Ga0111539_10011313 | |||
| 294 | Ga0105245_10022014 | |||
| 295 | Ga0114129_10053064 | |||
| 296 | Ga0105248_10063893 | |||
| 297 | Ga0105249_10045867 | |||
| 298 | Ga0105246_10002653 | |||
| 299 | Ga0105246_10002767 | |||
| 300 | Ga0105246_10009328 | |||
| 301 | Ga0157373_10014680 | |||
| 302 | Ga0157369_10041659 | |||
| 303 | Ga0157369_10296958 | |||
| 304 | Ga0163162_10081541 | |||
| 305 | Ga0157372_10237746 | |||
| 306 | Ga0157375_10363221 | |||
| 307 | Ga0182008_10163704 | |||
| 308 | Ga0163161_10050203 | |||
| 309 | Ga0163161_10108561 | |||
| 310 | Ga0209148_1003076 | |||
| 311 | Ga0209129_1000180 | |||
| 312 | Ga0209025_1001362 | |||
| 313 | Ga0209051_1013646 | |||
| 314 | Ga0207697_10002111 | |||
| 315 | Ga0207697_10004819 | |||
| 316 | Ga0207655_1012294 | |||
| 317 | Ga0207655_1013553 | |||
| 318 | Ga0207655_1024983 | |||
| 319 | Ga0207682_10000747 | |||
| 320 | Ga0207645_10000843 | |||
| 321 | Ga0207645_10206648 | |||
| 322 | Ga0207681_10021886 | |||
| 323 | Ga0207687_10172124 | |||
| 324 | Ga0207644_10008918 | |||
| 325 | Ga0207690_10030402 | |||
| 326 | Ga0207669_10024442 | |||
| 327 | Ga0207691_10010743 | |||
| 328 | Ga0207668_10134181 | |||
| 329 | Ga0207668_10152059 | |||
| 330 | Ga0207675_100313771 | |||
| 331 | Ga0207683_10006815 | |||
| 332 | Ga0207428_10008236 | |||
| 333 | Ga0307408_100009546 | |||
| 334 | Ga0307408_100026368 | |||
| 335 | Ga0307408_100034192 | |||
| 336 | Ga0307408_100034721 | |||
| 337 | Ga0307408_100053051 | |||
| 338 | Ga0307408_100059177 | |||
| 339 | Ga0307408_100065608 | |||
| 340 | Ga0307408_100122261 | |||
| 341 | Ga0307408_100127273 | |||
| 342 | Ga0307408_100165163 | |||
| 343 | Ga0307408_100343627 | |||
| 344 | Ga0307405_10001802 | |||
| 345 | Ga0307405_10012185 | |||
| 346 | Ga0307405_10101575 | |||
| 347 | Ga0307405_10105642 | |||
| 348 | Ga0307405_10113649 | |||
| 349 | Ga0307405_10114571 | |||
| 350 | Ga0307405_10149022 | |||
| 351 | Ga0307405_10150432 | |||
| 352 | Ga0307405_10302624 | |||
| 353 | Ga0307405_10556780 | |||
| 354 | Ga0307413_10029834 | |||
| 355 | Ga0307413_10108244 | |||
| 356 | Ga0307413_10209142 | |||
| 357 | Ga0307413_10243946 | |||
| 358 | Ga0307413_10244315 | |||
| 359 | Ga0307413_10327389 | |||
| 360 | Ga0307413_10546810 | |||
| 361 | Ga0307410_10003768 | |||
| 362 | Ga0307406_10038434 | |||
| 363 | Ga0307406_10048615 | |||
| 364 | Ga0307406_10079441 | |||
| 365 | Ga0307406_10198103 | |||
| 366 | Ga0307407_10070957 | |||
| 367 | Ga0307407_10073660 | |||
| 368 | Ga0307407_10126393 | |||
| 369 | Ga0307407_10189202 | |||
| 370 | Ga0307412_10033114 | |||
| 371 | Ga0307412_10042612 | |||
| 372 | Ga0307412_10088989 | |||
| 373 | Ga0307412_10104892 | |||
| 374 | Ga0307412_10202779 | |||
| 375 | Ga0307412_10308612 | |||
| 376 | Ga0307409_100020086 | |||
| 377 | Ga0307409_100028147 | |||
| 378 | Ga0307409_100149106 | |||
| 379 | Ga0307409_100156478 | |||
| 380 | Ga0307409_100179624 | |||
| 381 | Ga0307409_100189193 | |||
| 382 | Ga0307409_100243260 | |||
| 383 | Ga0307416_100016859 | |||
| 384 | Ga0307416_100029842 | |||
| 385 | Ga0307416_100039597 | |||
| 386 | Ga0307416_100067666 | |||
| 387 | Ga0307416_100133609 | |||
| 388 | Ga0307416_100149026 | |||
| 389 | Ga0307416_100189343 | |||
| 390 | Ga0307416_100403944 | |||
| 391 | Ga0307414_10018053 | |||
| 392 | Ga0307414_10215445 | |||
| 393 | Ga0307411_10146083 | |||
| 394 | Ga0307415_100005242 | |||
| 395 | Ga0307415_100016231 | |||
| 396 | Ga0307415_100173437 | |||
| 397 | Ga0395899_0006778 | |||
| 398 | Ga0395899_0059928 | |||
| 399 | Ga0395899_0083598 | |||
| 400 | Ga0395900_0048456 | |||
| 401 | Ga0395900_0128042 | |||
| 402 | Ga0395900_0151000 | |||
| 403 | Ga0395900_0200923 | |||
| 404 | Ga0395898_0001020 | |||
| 405 | Ga0395898_0083035 | |||
| 406 | Ga0395898_0224596 | |||
| 407 | Ga0395898_0280505 | |||
| 408 | Ga0395901_0005392 | |||
| 409 | Ga0395901_0039871 | |||
| 410 | Ga0395901_0105049 | |||
| 411 | Ga0395901_0171669 | |||
| 412 | Ga0439436_0001436 | |||
| 413 | Ga0439436_0012025 | |||
| 414 | Ga0439438_012694 | |||
| 415 | Ga0439438_016764 | |||
| 416 | Ga0439439_0003275 | |||
| 417 | Ga0439439_0003731 | |||
| 418 | Ga0439466_0010813 | |||
| 419 | Ga0439465_0048626 | |||
| 420 | Ga0439433_0000621 | |||
| 421 | Ga0439433_0006674 | |||
| 422 | Ga0439433_0011005 | |||
| 423 | Ga0439442_000193 | |||
| 424 | Ga0439442_008319 | |||
| 425 | Ga0439449_0000036 | |||
| 426 | Ga0439449_0006320 | |||
| 427 | Ga0439449_0063247 | |||
| 428 | Ga0439449_0065994 | |||
| 429 | Ga0439452_027645 | |||
| 430 | Ga0439457_001868 | |||
| 431 | Ga0439457_002655 | |||
| 432 | Ga0439457_003263 | |||
| 433 | Ga0439462_0045886 | |||
| 434 | Ga0450919_000236 | |||
| 435 | Ga0450920_000125 | |||
| 436 | Ga0450920_005321 | |||
| 437 | Ga0450907_000222 | |||
| 438 | Ga0450907_032280 | |||
| 439 | Ga0439446_0006525 | |||
| 440 | Ga0450909_001160 | |||
| 441 | Ga0439434_0002880 | |||
| 442 | Ga0439434_0012430 | |||
| 443 | Ga0450918_001676 | |||
| 444 | Ga0466961_0097333 | |||
| 445 | Ga0495653_0030559 | |||
| 446 | Ga0495580_0217273 | |||
| 447 | Ga0495582_0113137 | |||
| 448 | Ga0495662_0011663 | |||
| 449 | Ga0495630_0252213 | |||
| 450 | Ga0495631_0038244 | |||
| 451 | Ga0495642_0074400 | |||
| 452 | Ga0495665_0011268 | |||
| 453 | Ga0495586_0074339 | |||
| 454 | Ga0495586_0219142 | |||
| 455 | Ga0495645_0001259 | |||
| 456 | Ga0495667_0029533 | |||
| 457 | Ga0495656_0092972 | |||
| 458 | Ga0495588_0009702 | |||
| 459 | Ga0495657_0060591 | |||
| 460 | Ga0495670_0005066 | |||
| 461 | Ga0495670_0027914 | |||
| 462 | Ga0495581_0012010 | |||
| 463 | Ga0495581_0125998 | |||
| 464 | Ga0495581_0131447 | |||
| 465 | Ga0495636_0035690 | |||
| 466 | Ga0495680_0282094 | |||
| 467 | Ga0495677_0023394 | |||
| 468 | Ga0495681_0066199 | |||
| 469 | Ga0495684_0148337 | |||
| 470 | Ga0495593_0067286 | |||
| 471 | Ga0496102_0047278 | |||
| 472 | Ga0496102_0186939 | |||
| 473 | Ga0496103_0013610 | |||
| 474 | Ga0496103_0243350 | |||
| 475 | Ga0496106_0138565 | |||
| 476 | Ga0496107_0020091 | |||
| 477 | Ga0496107_0175799 | |||
| 478 | Ga0496108_0374287 | |||
| 479 | Ga0496109_0050086 | |||
| 480 | Ga0496110_0174708 | |||
| 481 | Ga0496112_0204815 | |||
| 482 | Ga0496112_0313907 | |||
| 483 | Ga0496112_0517047 | |||
| 484 | Ga0496113_0057225 | |||
| 485 | Ga0496114_0023049 | |||
| 486 | Ga0496114_0182244 | |||
| 487 | Ga0496115_0048356 | |||
| 488 | Ga0496124_0126780 | |||
| 489 | Ga0496125_0090730 | |||
| 490 | Ga0496125_0165399 | |||
| 491 | Ga0501032_0003609 | |||
| 492 | Ga0501034_0000038 | |||
| 493 | Ga0501036_0024315 | |||
| 494 | Ga0501037_0009153 | |||
| 495 | Ga0501037_0009830 | |||
| 496 | Ga0501037_0187836 | |||
| 497 | Ga0501038_0093550 | |||
| 498 | Ga0501038_0239384 | |||
| 499 | Ga0501039_0014696 | |||
| 500 | Ga0501039_0058100 | |||
| 501 | Ga0501043_0057903 | |||
| 502 | Ga0501043_0163384 | |||
| 503 | Ga0501070_0201753 | |||
| 504 | Ga0501073_0146275 | |||
| 505 | Ga0501279_007124 | |||
| 506 | Ga0501044_0080488 | |||
| 507 | nmdc:mga05p37_48321_c1 | |||
| 508 | nmdc:mga08y16_228755_c1 | |||
| 509 | nmdc:mga0n895_42847_c1 | |||
| 510 | 2537900911 | |||
| 511 | 2691511831 | |||
| 512 | 2775657240 | |||
| 513 | 2808829016 | |||
| 514 | 2808850241 | |||
| 515 | 2808877207 | |||
| 516 | 2808893260 | |||
| 517 | 2812319247 | |||
| 518 | 2844850588 | |||
| 519 | 2857744865 | |||
| 520 | 2904499100 | |||
| 521 | 2904780590 | |||
| 522 | 2910809983 | |||
| 523 | 2919039076 | |||
| 524 | 2919051750 | |||
| 525 | 2919060927 | |||
| 526 | 2919392782 | |||
| 527 | 2919541334 | |||
| 528 | 2932430154 | |||
| 529 | 2933422157 | |||
| 530 | 2939601882 | |||
| 531 | 2939649507 | |||
| 532 | 2939678966 | |||
| 533 | 2945917000 | |||
| 534 | 2945922752 | |||
| 535 | 2945945458 | |||
| 536 | 2945956229 | |||
| 537 | 2946041563 | |||
| 538 | 2946060831 | |||
| 539 | 2954002764 | |||
| 540 | 2974305005 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2cfo-assembly1.cif.gz_A | non-discriminating glutamyl-trna synthetase from thermosynechococcus elongatus in complex with glu | 0.8823 | 28 | 320 |
| 1g59-assembly1.cif.gz_A | glutamyl-trna synthetase complexed with trna(glu). | 0.8791 | 27 | 320 |
| 8vc5-assembly1.cif.gz_A | crystal structure of glutamyl-trna synthetase glurs from pseudomonas aeruginosa (zinc bound) | 0.8748 | 28 | 321 |
| 2cv1-assembly1.cif.gz_A | glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex | 0.8635 | 27 | 320 |
| 4a91-assembly1.cif.gz_A | crystal structure of the glutamyl-queuosine trnaasp synthetase from e. coli complexed with l-glutamate | 0.8621 | 28 | 314 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4a91A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.925 | 30 | 103 | 3.40.50.620 |
| 3akzC01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9181 | 32 | 253 | 3.40.50.620 |
| 2hz7A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8824 | 29 | 248 | 3.40.50.620 |
| 3akzC01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8819 | 32 | 253 | 3.40.50.620 |
| af_Q2G241_1_332_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8776 | 32 | 321 | 3.40.50.620 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3D3L263-F1-model_v4 | tRNA glutamyl-Q(34) synthetase GluQRS | 0.9635 | 178 | 317 |
GO:0004818
GO:0005524 GO:0005829 GO:0006424 |
| AF-A0A554RUB4-F1-model_v4 | Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) | 0.959 | 27 | 315 |
GO:0004818
GO:0005524 GO:0005829 GO:0006400 GO:0006424 GO:0008270 |
| AF-A0A1G8I9C8-F1-model_v4 | Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) | 0.9585 | 27 | 318 |
GO:0004818
GO:0005524 GO:0005829 GO:0006400 GO:0006424 GO:0008270 |
| AF-A0A5E3ZWG7-F1-model_v4 | Glutamyl-Q tRNA(Asp) synthetase | 0.9565 | 30 | 288 |
GO:0004818
GO:0005524 GO:0005829 GO:0006400 GO:0006424 GO:0008270 |
| AF-A0A1H7IB23-F1-model_v4 | Glutamyl-tRNA synthetase | 0.9551 | 51 | 317 |
GO:0004818
GO:0005524 GO:0005829 GO:0006424 |