F376774

General Info

Members Datasets Scaffolds Average Seq Length
270 187 540 273

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100000007|Ga0070708_10000000793
Length 324
Sequence VKYACIARHVAEYRVRLMCRVLAVAPSGFYAWRKRSPSARAITDERLMLNVRVSHERSDGAYGAPRVLRDLRDEGLWVGKKRVARLMRTHGLRGQSARRRGVRTTDSCHSEPIAPNLLNRQFDVNGVAGLDRVWVSDITYVPTREGWLYLATVLDLASRRVVGWAMRETLKLDLALAAVRMALGTRRPGPGLLHHSDRGWHYASAEYRALLAAQGITSSMSNKGDCWDNAVAESFFATLEIELIAKRDWRTRDEARRAIFRYIETWYNRQRRHSSLDYLSPVQFEGRVISAALTTTIPVSTKPGQVHCLLCLFFVLRVLRDLCG

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
75 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
126 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
127 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
128 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
129 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
130 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
131 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
132 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
133 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
134 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
136 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
137 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
138 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
139 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
140 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
145 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
146 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
147 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
148 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
149 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
150 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
151 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
155 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
156 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
157 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
158 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
159 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
160 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
161 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
162 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
163 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
166 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
167 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
168 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
169 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
185 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.63
Stem 0
Stem Tuber 0
Unclassified 7.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100000007 3300005445 Bacteria 146443
2 Ga0065714_10118195 3300005288 Bacteria 1382
3 Ga0070683_100008233 3300005329 Bacteria 8859
4 Ga0070683_100187286 3300005329 Bacteria 1965
5 Ga0070683_100272380 3300005329 Bacteria 1610
6 Ga0070683_100306298 3300005329 Bacteria 1511
7 Ga0070670_100103734 3300005331 Bacteria 2449
8 Ga0070670_100192358 3300005331 Bacteria 1772
9 Ga0070677_10072051 3300005333 Bacteria 1456
10 Ga0070680_100220199 3300005336 Bacteria 1602
11 Ga0070680_100355859 3300005336 Bacteria 1245
12 Ga0070680_100361179 3300005336 Bacteria 1235
13 Ga0070682_100190047 3300005337 Bacteria 1441
14 Ga0070682_100193615 3300005337 Bacteria 1429
15 Ga0068868_100477921 3300005338 Bacteria 1088
16 Ga0070660_100227130 3300005339 Unclassified 1518
17 Ga0070689_100259565 3300005340 Bacteria 1436
18 Ga0070687_100137938 3300005343 Bacteria 1416
19 Ga0070661_100117735 3300005344 Bacteria 1988
20 Ga0070661_100254897 3300005344 Bacteria 1355
21 Ga0070661_100420779 3300005344 Bacteria 1059
22 Ga0070668_100193782 3300005347 Bacteria 1665
23 Ga0070668_100304296 3300005347 Bacteria 1338
24 Ga0070669_100275068 3300005353 Bacteria 1348
25 Ga0070669_100280428 3300005353 Bacteria 1335
26 Ga0070669_100792354 3300005353 Bacteria 805
27 Ga0070675_100053691 3300005354 Bacteria 3315
28 Ga0070675_100067739 3300005354 Unclassified 2954
29 Ga0070671_100315236 3300005355 Bacteria 1332
30 Ga0070688_100013969 3300005365 Bacteria 4542
31 Ga0070667_100314131 3300005367 Bacteria 1413
32 Ga0070709_10081449 3300005434 Bacteria 2113
33 Ga0070709_10122512 3300005434 Bacteria 1764
34 Ga0070714_100068245 3300005435 Bacteria 3067
35 Ga0070714_100068917 3300005435 Bacteria 3054
36 Ga0070714_100344198 3300005435 Bacteria 1399
37 Ga0070713_100102274 3300005436 Bacteria 2484
38 Ga0070713_100171448 3300005436 Bacteria 1944
39 Ga0070701_10130159 3300005438 Bacteria 1429
40 Ga0070711_100291601 3300005439 Bacteria 1294
41 Ga0070694_100236883 3300005444 Bacteria 1375
42 Ga0070662_100139946 3300005457 Bacteria 1874
43 Ga0070662_100266689 3300005457 Bacteria 1381
44 Ga0070681_10015748 3300005458 Bacteria 7537
45 Ga0070681_10312518 3300005458 Bacteria 1481
46 Ga0070681_10349491 3300005458 Bacteria 1389
47 Ga0070681_10349999 3300005458 Bacteria 1388
48 Ga0070681_10359550 3300005458 Bacteria 1366
49 Ga0070681_10674525 3300005458 Bacteria 949
50 Ga0068867_100384664 3300005459 Bacteria 1179
51 Ga0070685_10196518 3300005466 Bacteria 1308
52 Ga0070698_100425870 3300005471 Bacteria 1262
53 Ga0070679_100037973 3300005530 Bacteria 4785
54 Ga0070679_100104552 3300005530 Bacteria 2818
55 Ga0070679_100147555 3300005530 Bacteria 2329
56 Ga0070684_100077958 3300005535 Bacteria 2927
57 Ga0070684_100143100 3300005535 Bacteria 2163
58 Ga0070684_100291198 3300005535 Bacteria 1497
59 Ga0070684_100322009 3300005535 Bacteria 1420
60 Ga0070684_100652158 3300005535 Bacteria 980
61 Ga0068853_100259112 3300005539 Bacteria 1598
62 Ga0070672_100168637 3300005543 Bacteria 1820
63 Ga0070672_100485620 3300005543 Bacteria 1067
64 Ga0070693_100167462 3300005547 Bacteria 1405
65 Ga0070665_100498086 3300005548 Bacteria 1229
66 Ga0068855_100505057 3300005563 Bacteria 1313
67 Ga0070664_100207539 3300005564 Bacteria 1750
68 Ga0070664_100271393 3300005564 Bacteria 1528
69 Ga0070664_100389518 3300005564 Bacteria 1273
70 Ga0068857_100403065 3300005577 Bacteria 1273
71 Ga0068854_100225739 3300005578 Bacteria 1484
72 Ga0068856_100201867 3300005614 Bacteria 2003
73 Ga0068856_100348678 3300005614 Bacteria 1499
74 Ga0068852_100132991 3300005616 Bacteria 2293
75 Ga0068859_100403668 3300005617 Bacteria 1463
76 Ga0068859_100426257 3300005617 Bacteria 1423
77 Ga0068864_100319918 3300005618 Bacteria 1457
78 Ga0068866_10169439 3300005718 Bacteria 1280
79 Ga0068861_100412910 3300005719 Bacteria 1201
80 Ga0068870_10138132 3300005840 Bacteria 1423
81 Ga0068870_10152301 3300005840 Bacteria 1363
82 Ga0068863_100242366 3300005841 Bacteria 1740
83 Ga0068858_100408984 3300005842 Bacteria 1304
84 Ga0068862_100025427 3300005844 Bacteria 4971
85 Ga0097621_100107678 3300006237 Bacteria 2352
86 Ga0097621_100393151 3300006237 Bacteria 1240
87 Ga0075430_100016530 3300006846 Bacteria 6283
88 Ga0075430_100204833 3300006846 Bacteria 1637
89 Ga0075430_100246811 3300006846 Bacteria 1479
90 Ga0075431_100285238 3300006847 Bacteria 1671
91 Ga0075431_100509451 3300006847 Bacteria 1194
92 Ga0075431_100700564 3300006847 Bacteria 990
93 Ga0075429_100178390 3300006880 Bacteria 1861
94 Ga0075429_100271791 3300006880 Bacteria 1484
95 Ga0068865_100059731 3300006881 Bacteria 2668
96 Ga0097620_100403627 3300006931 Bacteria 1463
97 Ga0097620_100426309 3300006931 Bacteria 1423
98 Ga0105240_10259977 3300009093 Unclassified 2003
99 Ga0105240_10390042 3300009093 Unclassified 1571
100 Ga0105245_10325446 3300009098 Bacteria 1516
101 Ga0105243_10296788 3300009148 Bacteria 1463
102 Ga0105241_10035262 3300009174 Bacteria 3762
103 Ga0105242_10013192 3300009176 Bacteria 6379
104 Ga0105242_10228068 3300009176 Bacteria 1668
105 Ga0105248_10255837 3300009177 Bacteria 1971
106 Ga0105248_10513693 3300009177 Bacteria 1351
107 Ga0105237_10180555 3300009545 Bacteria 2111
108 Ga0105238_10052201 3300009551 Bacteria 4111
109 Ga0105238_10213324 3300009551 Bacteria 1907
110 Ga0105238_10323388 3300009551 Bacteria 1529
111 Ga0105249_10074275 3300009553 Bacteria 3147
112 Ga0105249_10156995 3300009553 Bacteria 2195
113 Ga0157370_10254885 3300013104 Unclassified 1623
114 Ga0157369_10155249 3300013105 Unclassified 2418
115 Ga0157369_10399622 3300013105 Bacteria 1426
116 Ga0157374_10332397 3300013296 Bacteria 1507
117 Ga0157374_10825422 3300013296 Bacteria 943
118 Ga0163162_10338521 3300013306 Bacteria 1637
119 Ga0157372_10294658 3300013307 Bacteria 1887
120 Ga0157372_10310080 3300013307 Bacteria 1837
121 Ga0157372_10595027 3300013307 Bacteria 1289
122 Ga0157375_10349438 3300013308 Bacteria 1644
123 Ga0157375_10397994 3300013308 Bacteria 1544
124 Ga0163163_10376602 3300014325 Bacteria 1477
125 Ga0157377_10145666 3300014745 Bacteria 1460
126 Ga0157376_10371521 3300014969 Bacteria 1375
127 Ga0213873_10030491 3300021358 Bacteria 1335
128 Ga0213871_10028189 3300021441 Bacteria 1447
129 Ga0207682_10036625 3300025893 Bacteria 1986
130 Ga0207699_10202102 3300025906 Unclassified 1347
131 Ga0207699_10202112 3300025906 Bacteria 1347
132 Ga0207643_10031282 3300025908 Unclassified 2966
133 Ga0207705_10189405 3300025909 Bacteria 1555
134 Ga0207654_10068579 3300025911 Bacteria 2099
135 Ga0207707_10000539 3300025912 Bacteria 38632
136 Ga0207707_10298620 3300025912 Bacteria 1393
137 Ga0207707_10333333 3300025912 Bacteria 1309
138 Ga0207707_10333859 3300025912 Bacteria 1308
139 Ga0207695_10210879 3300025913 Unclassified 1853
140 Ga0207671_10233344 3300025914 Bacteria 1444
141 Ga0207660_10275110 3300025917 Bacteria 1335
142 Ga0207660_10281514 3300025917 Bacteria 1320
143 Ga0207662_10161912 3300025918 Bacteria 1430
144 Ga0207657_10082804 3300025919 Unclassified 2693
145 Ga0207652_10314216 3300025921 Bacteria 1414
146 Ga0207652_10390630 3300025921 Bacteria 1256
147 Ga0207681_10197365 3300025923 Bacteria 1543
148 Ga0207681_10271797 3300025923 Bacteria 1330
149 Ga0207694_10027595 3300025924 Bacteria 4324
150 Ga0207694_10153229 3300025924 Bacteria 1858
151 Ga0207694_10292769 3300025924 Bacteria 1339
152 Ga0207650_10213695 3300025925 Bacteria 1550
153 Ga0207650_10237686 3300025925 Bacteria 1471
154 Ga0207659_10293316 3300025926 Bacteria 1333
155 Ga0207687_10477081 3300025927 Bacteria 1038
156 Ga0207700_10176036 3300025928 Bacteria 1788
157 Ga0207700_10336790 3300025928 Bacteria 1311
158 Ga0207700_10357797 3300025928 Unclassified 1272
159 Ga0207664_10289489 3300025929 Bacteria 1439
160 Ga0207664_10300451 3300025929 Bacteria 1412
161 Ga0207644_10297044 3300025931 Bacteria 1300
162 Ga0207706_10082938 3300025933 Bacteria 2818
163 Ga0207686_10119978 3300025934 Bacteria 1788
164 Ga0207686_10170701 3300025934 Bacteria 1533
165 Ga0207709_10156581 3300025935 Bacteria 1584
166 Ga0207669_10207437 3300025937 Bacteria 1427
167 Ga0207704_10130183 3300025938 Bacteria 1741
168 Ga0207665_10163913 3300025939 Bacteria 1601
169 Ga0207691_10074121 3300025940 Bacteria 3070
170 Ga0207691_10110728 3300025940 Bacteria 2442
171 Ga0207661_10010064 3300025944 Bacteria 6796
172 Ga0207661_10314933 3300025944 Bacteria 1405
173 Ga0207661_10338430 3300025944 Bacteria 1355
174 Ga0207679_10104867 3300025945 Bacteria 2219
175 Ga0207667_10061579 3300025949 Bacteria 3925
176 Ga0207712_10207007 3300025961 Bacteria 1560
177 Ga0207712_10339868 3300025961 Bacteria 1244
178 Ga0207668_10294054 3300025972 Bacteria 1337
179 Ga0207658_10308916 3300025986 Bacteria 1365
180 Ga0207677_10423166 3300026023 Bacteria 1135
181 Ga0207702_10009444 3300026078 Bacteria 8193
182 Ga0207702_10197189 3300026078 Bacteria 1864
183 Ga0207702_10594860 3300026078 Bacteria 1085
184 Ga0207641_10427076 3300026088 Bacteria 1277
185 Ga0207648_10016962 3300026089 Bacteria 6636
186 Ga0207675_100355612 3300026118 Bacteria 1436
187 Ga0207698_10391830 3300026142 Bacteria 1325
188 Ga0268266_10000684 3300028379 Bacteria 45767
189 Ga0268265_10348347 3300028380 Bacteria 1351
190 Ga0265334_10029972 3300028573 Bacteria 2179
191 Ga0265314_10197421 3300031711 Bacteria 1192
192 Ga0307413_10230656 3300031824 Bacteria 1359
193 Ga0307413_10295400 3300031824 Bacteria 1226
194 Ga0307409_100448717 3300031995 Bacteria 1244
195 Ga0307416_100512179 3300032002 Bacteria 1266
196 Ga0307411_10201683 3300032005 Bacteria 1528
197 Ga0307415_100270923 3300032126 Bacteria 1391
198 Ga0373923_0054090 3300035111 Bacteria 1689
199 Ga0373936_0065550 3300035113 Bacteria 1490
200 Ga0373954_0009259 3300035118 Bacteria 4331
201 Ga0373956_0013141 3300035119 Bacteria 3442
202 Ga0373957_0116171 3300035120 Bacteria 1080
203 Ga0373955_0034115 3300035172 Bacteria 2684
204 Ga0373924_0074259 3300035410 Bacteria 1438
205 Ga0373935_0186760 3300035692 Bacteria 1425
206 Ga0373933_0001415 3300035724 Bacteria 14094
207 Ga0373947_0096284 3300035725 Bacteria 1853
208 Ga0373947_0160779 3300035725 Bacteria 1452
209 Ga0373937_0034564 3300036401 Bacteria 4597
210 Ga0373925_0162916 3300037068 Bacteria 1757
211 Ga0373925_0269603 3300037068 Bacteria 1369
212 Ga0436362_0302937 3300039453 Bacteria 2026
213 Ga0451837_0983491 3300041494 Bacteria 1582
214 Ga0439457_026675 3300042014 Bacteria 1279
215 Ga0451577_0227943 3300042876 Bacteria 1684
216 Ga0453683_0078511 3300044673 Bacteria 2067
217 Ga0453684_0510512 3300044712 Bacteria 1329
218 Ga0451576_0213443 3300045051 Bacteria 2015
219 Ga0466967_0202697 3300045976 Bacteria 1879
220 Ga0466967_0982710 3300045976 Bacteria 840
221 Ga0495592_0179218 3300046454 Bacteria 1444
222 Ga0495651_0187446 3300046462 Bacteria 1458
223 Ga0495653_0134049 3300046463 Bacteria 1749
224 Ga0495664_0044964 3300046477 Bacteria 2618
225 Ga0495584_0180066 3300046491 Bacteria 1074
226 Ga0495594_0135305 3300046499 Bacteria 1396
227 Ga0495594_0146422 3300046499 Bacteria 1340
228 Ga0495608_0015326 3300046511 Bacteria 5318
229 Ga0495608_0050858 3300046511 Bacteria 2748
230 Ga0495618_0143145 3300046514 Bacteria 1529
231 Ga0495628_0133028 3300046516 Bacteria 1901
232 Ga0495630_0228754 3300046517 Bacteria 1420
233 Ga0495652_0003821 3300046529 Bacteria 14707
234 Ga0495586_0080394 3300046535 Bacteria 1791
235 Ga0495645_0023513 3300046543 Bacteria 4462
236 Ga0495667_0018337 3300046559 Bacteria 4728
237 Ga0495667_0308074 3300046559 Bacteria 1003
238 Ga0495635_0027005 3300046663 Bacteria 3994
239 Ga0495659_0039571 3300046664 Unclassified 1676
240 Ga0495623_0101089 3300046679 Bacteria 1756
241 Ga0495646_0091229 3300046680 Bacteria 1758
242 Ga0495600_0156205 3300046809 Bacteria 1475
243 Ga0495581_0040531 3300047315 Bacteria 2695
244 Ga0495604_0097246 3300047317 Bacteria 2171
245 Ga0495636_0061306 3300047318 Unclassified 1590
246 Ga0495680_0033388 3300047322 Bacteria 4167
247 Ga0495675_0013889 3300047444 Bacteria 5091
248 Ga0495684_0011135 3300047471 Bacteria 6952
249 Ga0495602_0190799 3300048088 Bacteria 1571
250 Ga0501036_0091942 3300049572 Unclassified 2563
251 Ga0501040_0002663 3300049576 Bacteria 11517
252 Ga0501041_0248214 3300049577 Unclassified 1119
253 Ga0501042_0001864 3300049578 Bacteria 12656
254 Ga0501071_0430964 3300049587 Unclassified 1008
255 Ga0501075_0010000 3300049591 Bacteria 6652
256 Ga0501079_0133850 3300049741 Bacteria 1929
257 Ga0501080_0078069 3300049742 Unclassified 3080
258 Ga0501045_0133662 3300049824 Unclassified 1844
259 nmdc:mga05p37_497733_c1 3300050507 Bacteria 1400
260 nmdc:mga09592_166240_c1 3300050508 Bacteria 1907
261 nmdc:mga0qj67_141238_c1 3300050509 Bacteria 1953
262 nmdc:mga0qj67_398414_c1 3300050509 Bacteria 1111
263 nmdc:mga0qj67_94204_c1 3300050509 Bacteria 2409
264 nmdc:mga06r32_439830_c1 3300050510 Bacteria 1284
265 nmdc:mga06r32_689379_c1 3300050510 Bacteria 988
266 Ga0495601_0074957 3300053077 Bacteria 2165
267 Ga0495612_0091326 3300053078 Bacteria 1289
268 Ga0495595_0015114 3300053084 Bacteria 3288
269 Ga0495619_0057966 3300053085 Bacteria 2570
270 Ga0501082_0043279 3300060353 Unclassified 3882
271 Ga0070708_100000007
272 Ga0065714_10118195
273 Ga0070683_100008233
274 Ga0070683_100187286
275 Ga0070683_100272380
276 Ga0070683_100306298
277 Ga0070670_100103734
278 Ga0070670_100192358
279 Ga0070677_10072051
280 Ga0070680_100220199
281 Ga0070680_100355859
282 Ga0070680_100361179
283 Ga0070682_100190047
284 Ga0070682_100193615
285 Ga0068868_100477921
286 Ga0070660_100227130
287 Ga0070689_100259565
288 Ga0070687_100137938
289 Ga0070661_100117735
290 Ga0070661_100254897
291 Ga0070661_100420779
292 Ga0070668_100193782
293 Ga0070668_100304296
294 Ga0070669_100275068
295 Ga0070669_100280428
296 Ga0070669_100792354
297 Ga0070675_100053691
298 Ga0070675_100067739
299 Ga0070671_100315236
300 Ga0070688_100013969
301 Ga0070667_100314131
302 Ga0070709_10081449
303 Ga0070709_10122512
304 Ga0070714_100068245
305 Ga0070714_100068917
306 Ga0070714_100344198
307 Ga0070713_100102274
308 Ga0070713_100171448
309 Ga0070701_10130159
310 Ga0070711_100291601
311 Ga0070694_100236883
312 Ga0070662_100139946
313 Ga0070662_100266689
314 Ga0070681_10015748
315 Ga0070681_10312518
316 Ga0070681_10349491
317 Ga0070681_10349999
318 Ga0070681_10359550
319 Ga0070681_10674525
320 Ga0068867_100384664
321 Ga0070685_10196518
322 Ga0070698_100425870
323 Ga0070679_100037973
324 Ga0070679_100104552
325 Ga0070679_100147555
326 Ga0070684_100077958
327 Ga0070684_100143100
328 Ga0070684_100291198
329 Ga0070684_100322009
330 Ga0070684_100652158
331 Ga0068853_100259112
332 Ga0070672_100168637
333 Ga0070672_100485620
334 Ga0070693_100167462
335 Ga0070665_100498086
336 Ga0068855_100505057
337 Ga0070664_100207539
338 Ga0070664_100271393
339 Ga0070664_100389518
340 Ga0068857_100403065
341 Ga0068854_100225739
342 Ga0068856_100201867
343 Ga0068856_100348678
344 Ga0068852_100132991
345 Ga0068859_100403668
346 Ga0068859_100426257
347 Ga0068864_100319918
348 Ga0068866_10169439
349 Ga0068861_100412910
350 Ga0068870_10138132
351 Ga0068870_10152301
352 Ga0068863_100242366
353 Ga0068858_100408984
354 Ga0068862_100025427
355 Ga0097621_100107678
356 Ga0097621_100393151
357 Ga0075430_100016530
358 Ga0075430_100204833
359 Ga0075430_100246811
360 Ga0075431_100285238
361 Ga0075431_100509451
362 Ga0075431_100700564
363 Ga0075429_100178390
364 Ga0075429_100271791
365 Ga0068865_100059731
366 Ga0097620_100403627
367 Ga0097620_100426309
368 Ga0105240_10259977
369 Ga0105240_10390042
370 Ga0105245_10325446
371 Ga0105243_10296788
372 Ga0105241_10035262
373 Ga0105242_10013192
374 Ga0105242_10228068
375 Ga0105248_10255837
376 Ga0105248_10513693
377 Ga0105237_10180555
378 Ga0105238_10052201
379 Ga0105238_10213324
380 Ga0105238_10323388
381 Ga0105249_10074275
382 Ga0105249_10156995
383 Ga0157370_10254885
384 Ga0157369_10155249
385 Ga0157369_10399622
386 Ga0157374_10332397
387 Ga0157374_10825422
388 Ga0163162_10338521
389 Ga0157372_10294658
390 Ga0157372_10310080
391 Ga0157372_10595027
392 Ga0157375_10349438
393 Ga0157375_10397994
394 Ga0163163_10376602
395 Ga0157377_10145666
396 Ga0157376_10371521
397 Ga0213873_10030491
398 Ga0213871_10028189
399 Ga0207682_10036625
400 Ga0207699_10202102
401 Ga0207699_10202112
402 Ga0207643_10031282
403 Ga0207705_10189405
404 Ga0207654_10068579
405 Ga0207707_10000539
406 Ga0207707_10298620
407 Ga0207707_10333333
408 Ga0207707_10333859
409 Ga0207695_10210879
410 Ga0207671_10233344
411 Ga0207660_10275110
412 Ga0207660_10281514
413 Ga0207662_10161912
414 Ga0207657_10082804
415 Ga0207652_10314216
416 Ga0207652_10390630
417 Ga0207681_10197365
418 Ga0207681_10271797
419 Ga0207694_10027595
420 Ga0207694_10153229
421 Ga0207694_10292769
422 Ga0207650_10213695
423 Ga0207650_10237686
424 Ga0207659_10293316
425 Ga0207687_10477081
426 Ga0207700_10176036
427 Ga0207700_10336790
428 Ga0207700_10357797
429 Ga0207664_10289489
430 Ga0207664_10300451
431 Ga0207644_10297044
432 Ga0207706_10082938
433 Ga0207686_10119978
434 Ga0207686_10170701
435 Ga0207709_10156581
436 Ga0207669_10207437
437 Ga0207704_10130183
438 Ga0207665_10163913
439 Ga0207691_10074121
440 Ga0207691_10110728
441 Ga0207661_10010064
442 Ga0207661_10314933
443 Ga0207661_10338430
444 Ga0207679_10104867
445 Ga0207667_10061579
446 Ga0207712_10207007
447 Ga0207712_10339868
448 Ga0207668_10294054
449 Ga0207658_10308916
450 Ga0207677_10423166
451 Ga0207702_10009444
452 Ga0207702_10197189
453 Ga0207702_10594860
454 Ga0207641_10427076
455 Ga0207648_10016962
456 Ga0207675_100355612
457 Ga0207698_10391830
458 Ga0268266_10000684
459 Ga0268265_10348347
460 Ga0265334_10029972
461 Ga0265314_10197421
462 Ga0307413_10230656
463 Ga0307413_10295400
464 Ga0307409_100448717
465 Ga0307416_100512179
466 Ga0307411_10201683
467 Ga0307415_100270923
468 Ga0373923_0054090
469 Ga0373936_0065550
470 Ga0373954_0009259
471 Ga0373956_0013141
472 Ga0373957_0116171
473 Ga0373955_0034115
474 Ga0373924_0074259
475 Ga0373935_0186760
476 Ga0373933_0001415
477 Ga0373947_0096284
478 Ga0373947_0160779
479 Ga0373937_0034564
480 Ga0373925_0162916
481 Ga0373925_0269603
482 Ga0436362_0302937
483 Ga0451837_0983491
484 Ga0439457_026675
485 Ga0451577_0227943
486 Ga0453683_0078511
487 Ga0453684_0510512
488 Ga0451576_0213443
489 Ga0466967_0202697
490 Ga0466967_0982710
491 Ga0495592_0179218
492 Ga0495651_0187446
493 Ga0495653_0134049
494 Ga0495664_0044964
495 Ga0495584_0180066
496 Ga0495594_0135305
497 Ga0495594_0146422
498 Ga0495608_0015326
499 Ga0495608_0050858
500 Ga0495618_0143145
501 Ga0495628_0133028
502 Ga0495630_0228754
503 Ga0495652_0003821
504 Ga0495586_0080394
505 Ga0495645_0023513
506 Ga0495667_0018337
507 Ga0495667_0308074
508 Ga0495635_0027005
509 Ga0495659_0039571
510 Ga0495623_0101089
511 Ga0495646_0091229
512 Ga0495600_0156205
513 Ga0495581_0040531
514 Ga0495604_0097246
515 Ga0495636_0061306
516 Ga0495680_0033388
517 Ga0495675_0013889
518 Ga0495684_0011135
519 Ga0495602_0190799
520 Ga0501036_0091942
521 Ga0501040_0002663
522 Ga0501041_0248214
523 Ga0501042_0001864
524 Ga0501071_0430964
525 Ga0501075_0010000
526 Ga0501079_0133850
527 Ga0501080_0078069
528 Ga0501045_0133662
529 nmdc:mga05p37_497733_c1
530 nmdc:mga09592_166240_c1
531 nmdc:mga0qj67_141238_c1
532 nmdc:mga0qj67_398414_c1
533 nmdc:mga0qj67_94204_c1
534 nmdc:mga06r32_439830_c1
535 nmdc:mga06r32_689379_c1
536 Ga0495601_0074957
537 Ga0495612_0091326
538 Ga0495595_0015114
539 Ga0495619_0057966
540 Ga0501082_0043279

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00665

rve

Integrase core domain

129

226

0.98

PF13683

rve_3

Integrase core domain

214

281

0.96

PF13276

HTH_21

HTH-like domain

43

100

0.95

PF13333

rve_2

Integrase core domain

233

289

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x6n-assembly2.cif.gz_E human foamy virus integrase - catalytic core. manganese-bound structure. 0.8291 105 259
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.8109 102 260
2x6s-assembly2.cif.gz_C human foamy virus integrase - catalytic core. magnesium-bound structure. 0.8088 103 259
7ku7-assembly1.cif.gz_F cryo-em structure of rous sarcoma virus cleaved synaptic complex (csc) with hiv-1 integrase strand transfer inhibitor mk-2048. cluster identified by 3-dimensional variability analysis in cryosparc. 0.8036 104 262
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8028 102 260
ID Description Score Start End Superfamily
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9802 102 260 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9682 102 260 3.30.420.10
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9415 104 256 3.30.420.10
af_P0CF56_119_291_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9411 103 265 3.30.420.10
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9349 99 262 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A1V3SM83-F1-model_v4 Transposase 0.9975 104 192 GO:0003676
GO:0015074
AF-A0A246JJB7-F1-model_v4 IS3 family transposase 0.9918 109 245 GO:0003676
GO:0015074
AF-A0A2Z2KQG7-F1-model_v4 Integrase catalytic domain-containing protein 0.9907 111 266 GO:0003676
GO:0015074
AF-A0A1I3BGM4-F1-model_v4 Integrase core domain-containing protein 0.9905 125 242 GO:0003676
GO:0015074
AF-A0A7V8XCI3-F1-model_v4 IS3 family transposase 0.9896 109 267 GO:0003676
GO:0015074

Map