F376590

General Info

Members Datasets Scaffolds Average Seq Length
269 186 538 352

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2808606372|2808901283
Length 386
Sequence MAGRYQFGLDTFGDVTEGPDGSPLPHAQVLRNVVEEAVLADRLGLDFFGVGEHHRHEFAISAPEVVLAAIAGRTERIHLGSAVTVLSSDDPVRVFQRFATLDGLSGGRAEVILGRGSFIESFPLFGFELNQYQDLFEEKLNLFAALLPQEPVTWSGKLRAPLTDQLVYPPVEHGRLKTWVGVGGSPESVVRAAHYGLPLVLAIIGGSPARFAPLADLYRRALDQFGHPLQPIAIHSPGFVADSDAEALDILWPHYKVIIDRIGRERGWGPVTREHYEGEAGPHGALYAGSPETVAQKIAAAMRSIGASRFDMKYSNGTLPHEAMMGSIERYASIVVPRVRELLAESDAADAAAATAATDASAAADAEALAAADRADAAATAERPND

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
88 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
104 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
142 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
154 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 2808606372 Agromyces sp. 23-23 Isolate Unclassified
160 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
161 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
162 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
163 2643221549 Agromyces sp. Root1464 Isolate Unclassified
164 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
165 2643221617 Nocardioides sp. Root79 Isolate Unclassified
166 2643221619 Agromyces sp. Root81 Isolate Unclassified
167 2643221620 Nocardioides sp. Root240 Isolate Unclassified
168 2643221649 Leifsonia sp. Root4 Isolate Unclassified
169 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
170 2643221711 Terrabacter sp. Root85 Isolate Unclassified
171 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
172 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
173 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
174 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
175 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
176 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
177 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
178 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
179 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
180 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
181 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
182 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
183 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
184 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
185 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
186 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.85
Metatranscriptomes 0.37
Isolates 10.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.04
Nodule 0
Rhizoplane 4.46
Rhizosphere 76.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1001313 3300000549 Bacteria 3745
2 LJQas_1003799 3300000549 Bacteria 1999
3 rootL2_10044580 3300003322 Bacteria 2514
4 Ga0006562J51391_1196403 3300003578 Bacteria 1948
5 JGI25404J52841_10010404 3300003659 Bacteria 2001
6 Ga0055529_1000899 3300003763 Bacteria 16580
7 Ga0070658_10013084 3300005327 Bacteria 6657
8 Ga0070683_100001680 3300005329 Bacteria 17190
9 Ga0068869_100096016 3300005334 Bacteria 2237
10 Ga0070661_100040805 3300005344 Bacteria 3387
11 Ga0070668_100073313 3300005347 Bacteria 2669
12 Ga0070668_100140787 3300005347 Bacteria 1944
13 Ga0070675_100050910 3300005354 Bacteria 3402
14 Ga0070674_100041787 3300005356 Bacteria 3110
15 Ga0070659_100266727 3300005366 Bacteria 1421
16 Ga0070711_100150555 3300005439 Bacteria 1754
17 Ga0070662_100027601 3300005457 Bacteria 3943
18 Ga0070681_10013839 3300005458 Bacteria 8029
19 Ga0068867_100191243 3300005459 Bacteria 1633
20 Ga0068867_100427081 3300005459 Bacteria 1124
21 Ga0070679_100077774 3300005530 Bacteria 3307
22 Ga0070684_100072406 3300005535 Bacteria 3034
23 Ga0068857_100002617 3300005577 Bacteria 14778
24 Ga0068857_100087460 3300005577 Bacteria 2787
25 Ga0068852_100103023 3300005616 Bacteria 2580
26 Ga0068859_100074692 3300005617 Bacteria 3429
27 Ga0068866_10027587 3300005718 Bacteria 2696
28 Ga0081455_10001838 3300005937 Bacteria 25533
29 Ga0081455_10019896 3300005937 Bacteria 6337
30 Ga0081540_1000766 3300005983 Bacteria 29582
31 Ga0081540_1009731 3300005983 Bacteria 6592
32 Ga0075365_10033831 3300006038 Bacteria 3297
33 Ga0075365_10034641 3300006038 Bacteria 3261
34 Ga0075368_10000515 3300006042 Bacteria 11534
35 Ga0075364_10016934 3300006051 Bacteria 4542
36 Ga0075432_10001009 3300006058 Bacteria 8914
37 Ga0075432_10003748 3300006058 Bacteria 5175
38 Ga0075362_10021333 3300006177 Bacteria 2716
39 Ga0075367_10031762 3300006178 Bacteria 3034
40 Ga0075370_10002627 3300006353 Bacteria 8385
41 Ga0075428_100082340 3300006844 Bacteria 3511
42 Ga0075428_100135782 3300006844 Bacteria 2674
43 Ga0075428_100170257 3300006844 Bacteria 2361
44 Ga0075428_100181599 3300006844 Bacteria 2277
45 Ga0075430_100399965 3300006846 Bacteria 1134
46 Ga0075433_10008775 3300006852 Bacteria 8065
47 Ga0075433_10077797 3300006852 Bacteria 2922
48 Ga0075433_10079212 3300006852 Bacteria 2895
49 Ga0075434_100010880 3300006871 Bacteria 8553
50 Ga0075434_100368957 3300006871 Bacteria 1456
51 Ga0068865_100162286 3300006881 Bacteria 1706
52 Ga0075436_100002603 3300006914 Bacteria 12393
53 Ga0097620_100074692 3300006931 Bacteria 3429
54 Ga0075435_100008074 3300007076 Bacteria 7535
55 Ga0075435_100032975 3300007076 Bacteria 4092
56 Ga0105244_10002505 3300009036 Bacteria 13810
57 Ga0111539_10003578 3300009094 Bacteria 20479
58 Ga0111539_10446132 3300009094 Bacteria 1507
59 Ga0111539_10452025 3300009094 Bacteria 1496
60 Ga0105245_10020400 3300009098 Bacteria 5813
61 Ga0105245_10274848 3300009098 Bacteria 1644
62 Ga0105243_10026296 3300009148 Bacteria 4454
63 Ga0105243_10050810 3300009148 Bacteria 3277
64 Ga0105242_10118701 3300009176 Bacteria 2266
65 Ga0105237_10401969 3300009545 Bacteria 1374
66 Ga0105238_10220535 3300009551 Bacteria 1872
67 Ga0105238_10296019 3300009551 Bacteria 1601
68 Ga0105238_10345909 3300009551 Bacteria 1475
69 Ga0105239_10316004 3300010375 Bacteria 1761
70 Ga0157371_10045638 3300013102 Bacteria 3118
71 Ga0157369_10000926 3300013105 Bacteria 37311
72 Ga0157369_10019808 3300013105 Bacteria 7529
73 Ga0163162_10029674 3300013306 Bacteria 5414
74 Ga0163162_10149772 3300013306 Bacteria 2450
75 Ga0163162_10310173 3300013306 Bacteria 1710
76 Ga0157372_10178705 3300013307 Bacteria 2456
77 Ga0157372_10236802 3300013307 Bacteria 2117
78 Ga0157380_10008828 3300014326 Bacteria 7203
79 Ga0157380_10125404 3300014326 Bacteria 2182
80 Ga0163161_10048853 3300017792 Bacteria 3056
81 Ga0163161_10076645 3300017792 Bacteria 2454
82 Ga0209672_104204 3300025228 Bacteria 2734
83 Ga0209258_102686 3300025242 Bacteria 4368
84 Ga0209455_1001117 3300025272 Bacteria 13080
85 Ga0207655_1002397 3300025728 Bacteria 15287
86 Ga0207688_10101372 3300025901 Bacteria 1663
87 Ga0207695_10429196 3300025913 Bacteria 1205
88 Ga0207706_10086712 3300025933 Bacteria 2752
89 Ga0207686_10102463 3300025934 Bacteria 1914
90 Ga0207709_10061153 3300025935 Bacteria 2352
91 Ga0207709_10148649 3300025935 Bacteria 1620
92 Ga0207669_10137344 3300025937 Bacteria 1691
93 Ga0207704_10070171 3300025938 Bacteria 2218
94 Ga0207704_10164190 3300025938 Bacteria 1584
95 Ga0207661_10002162 3300025944 Bacteria 13541
96 Ga0207712_10166230 3300025961 Bacteria 1720
97 Ga0207668_10043954 3300025972 Bacteria 3036
98 Ga0207648_10192820 3300026089 Bacteria 1806
99 Ga0207674_10187036 3300026116 Bacteria 2021
100 Ga0207675_100135577 3300026118 Bacteria 2336
101 Ga0207698_10001941 3300026142 Bacteria 12140
102 Ga0207698_10361547 3300026142 Bacteria 1375
103 Ga0207428_10001136 3300027907 Bacteria 28891
104 Ga0207428_10099560 3300027907 Bacteria 2248
105 Ga0268265_10335442 3300028380 Bacteria 1375
106 Ga0265338_10111109 3300028800 Bacteria 2207
107 Ga0265314_10015254 3300031711 Bacteria 6101
108 Ga0307409_100039413 3300031995 Bacteria 3506
109 Ga0307416_100063549 3300032002 Bacteria 3023
110 Ga0307416_100382167 3300032002 Bacteria 1439
111 Ga0307415_100154923 3300032126 Bacteria 1768
112 Ga0373933_0243027 3300035724 Bacteria 1158
113 Ga0373937_0103366 3300036401 Bacteria 2646
114 Ga0395899_0001441 3300037312 Bacteria 20309
115 Ga0395899_0041205 3300037312 Bacteria 3451
116 Ga0395900_0016382 3300037418 Bacteria 7557
117 Ga0395900_0029695 3300037418 Bacteria 5610
118 Ga0395900_0078747 3300037418 Bacteria 3386
119 Ga0395898_0007619 3300037466 Bacteria 11491
120 Ga0395898_0008489 3300037466 Bacteria 10852
121 Ga0395898_0024461 3300037466 Bacteria 6092
122 Ga0395898_0186812 3300037466 Bacteria 1980
123 Ga0395905_0009139 3300037471 Bacteria 9711
124 Ga0395905_0103625 3300037471 Bacteria 2671
125 Ga0395905_0175033 3300037471 Bacteria 2015
126 Ga0395901_0029702 3300038443 Bacteria 5629
127 Ga0395901_0047878 3300038443 Bacteria 4439
128 Ga0395901_0068495 3300038443 Bacteria 3697
129 Ga0439465_0036568 3300041413 Bacteria 1577
130 Ga0451843_0229479 3300041509 Bacteria 2123
131 Ga0466969_0077221 3300044656 Bacteria 1594
132 Ga0466965_0003479 3300044683 Bacteria 6908
133 Ga0466970_0056728 3300044765 Bacteria 2093
134 Ga0466970_0110052 3300044765 Bacteria 1504
135 Ga0466960_0027630 3300044901 Bacteria 2590
136 Ga0466967_0021989 3300045976 Bacteria 5194
137 Ga0495650_0003628 3300046471 Bacteria 11107
138 Ga0495628_0193477 3300046516 Bacteria 1535
139 Ga0495630_0031858 3300046517 Bacteria 3927
140 Ga0495643_0028394 3300046522 Bacteria 3137
141 Ga0495634_0066357 3300046642 Bacteria 2389
142 Ga0495657_0135682 3300046675 Bacteria 1537
143 Ga0495672_0160559 3300047320 Bacteria 1156
144 Ga0495673_0063566 3300047469 Bacteria 1573
145 Ga0495684_0045272 3300047471 Bacteria 3367
146 Ga0496100_0001753 3300048903 Bacteria 10820
147 Ga0496101_0095884 3300048904 Bacteria 2213
148 Ga0496102_0007336 3300048905 Bacteria 9415
149 Ga0496102_0014741 3300048905 Bacteria 6797
150 Ga0496103_0006207 3300048906 Bacteria 7139
151 Ga0496104_0004943 3300048907 Bacteria 11629
152 Ga0496104_0163126 3300048907 Bacteria 2137
153 Ga0496105_0012162 3300048908 Bacteria 6814
154 Ga0496106_0151959 3300048909 Bacteria 1827
155 Ga0496112_0141094 3300048915 Bacteria 2379
156 Ga0496114_0007025 3300048917 Bacteria 8883
157 Ga0496114_0231771 3300048917 Bacteria 1622
158 Ga0496118_0036470 3300048921 Bacteria 3975
159 Ga0496119_0056543 3300048922 Bacteria 2377
160 Ga0496125_0097917 3300048928 Bacteria 2171
161 Ga0496126_0020169 3300048929 Bacteria 6542
162 Ga0501031_0001278 3300049568 Bacteria 15415
163 Ga0501031_0001914 3300049568 Bacteria 13122
164 Ga0501032_0009327 3300049569 Bacteria 7107
165 Ga0501032_0018320 3300049569 Bacteria 4906
166 Ga0501032_0038721 3300049569 Bacteria 3245
167 Ga0501033_0000028 3300049570 Bacteria 161436
168 Ga0501033_0018544 3300049570 Bacteria 5259
169 Ga0501033_0047339 3300049570 Bacteria 3197
170 Ga0501033_0115169 3300049570 Bacteria 1953
171 Ga0501034_0000074 3300049571 Bacteria 175369
172 Ga0501034_0022674 3300049571 Bacteria 6395
173 Ga0501034_0048506 3300049571 Bacteria 4286
174 Ga0501036_0019791 3300049572 Bacteria 5650
175 Ga0501037_0004235 3300049573 Bacteria 10407
176 Ga0501037_0017488 3300049573 Bacteria 5277
177 Ga0501037_0202518 3300049573 Bacteria 1402
178 Ga0501038_0004660 3300049574 Bacteria 12769
179 Ga0501038_0013319 3300049574 Bacteria 7500
180 Ga0501038_0039295 3300049574 Bacteria 4138
181 Ga0501039_0007303 3300049575 Bacteria 8416
182 Ga0501041_0015694 3300049577 Bacteria 4499
183 Ga0501042_0004516 3300049578 Bacteria 8880
184 Ga0501042_0041292 3300049578 Bacteria 3280
185 Ga0501043_0001830 3300049579 Bacteria 18249
186 Ga0501043_0009461 3300049579 Bacteria 7645
187 Ga0501046_0022046 3300049580 Bacteria 5250
188 Ga0501047_0025059 3300049581 Bacteria 5730
189 Ga0501047_0065354 3300049581 Bacteria 3506
190 Ga0501047_0168969 3300049581 Bacteria 2056
191 Ga0501048_0024634 3300049582 Bacteria 4391
192 Ga0501068_0014907 3300049584 Bacteria 4453
193 Ga0501070_0008920 3300049586 Bacteria 8477
194 Ga0501070_0099084 3300049586 Bacteria 2411
195 Ga0501080_0009798 3300049742 Bacteria 8756
196 Ga0501080_0141299 3300049742 Bacteria 2225
197 Ga0501080_0249136 3300049742 Bacteria 1620
198 Ga0501081_0025735 3300049743 Bacteria 3962
199 Ga0501083_0000011 3300049744 Bacteria 181041
200 Ga0501083_0013892 3300049744 Bacteria 5630
201 Ga0501083_0038066 3300049744 Bacteria 3270
202 Ga0501083_0072907 3300049744 Bacteria 2282
203 Ga0501035_0001366 3300049822 Bacteria 25097
204 Ga0501035_0026975 3300049822 Bacteria 5252
205 Ga0501044_0000532 3300049823 Bacteria 46273
206 Ga0501044_0037295 3300049823 Bacteria 5081
207 Ga0501044_0241661 3300049823 Bacteria 1749
208 Ga0501045_0000031 3300049824 Bacteria 60312
209 Ga0501045_0003513 3300049824 Bacteria 10737
210 nmdc:mga00v17_32284_c1 3300050491 Bacteria 3094
211 nmdc:mga0yw44_10855_c1 3300050492 Bacteria 4669
212 nmdc:mga0yw44_42392_c1 3300050492 Bacteria 2714
213 nmdc:mga0yw44_5160_c1 3300050492 Bacteria 4308
214 nmdc:mga06z11_66112_c1 3300050494 Bacteria 1900
215 nmdc:mga04h51_9200_c1 3300050495 Bacteria 2668
216 nmdc:mga07m45_14275_c1 3300050496 Bacteria 4228
217 nmdc:mga06r32_131459_c1 3300050510 Bacteria 2475
218 nmdc:mga08y16_218540_c1 3300050511 Bacteria 1973
219 nmdc:mga08y16_8447_c1 3300050511 Bacteria 10782
220 nmdc:mga0n895_1595_c1 3300050512 Bacteria 17073
221 nmdc:mga0rr50_4093_c1 3300050513 Bacteria 8514
222 nmdc:mga0rr50_42609_c1 3300050513 Bacteria 3316
223 nmdc:mga08x19_1894_c1 3300050514 Bacteria 12814
224 nmdc:mga0a205_5057_c2 3300050515 Bacteria 8104
225 nmdc:mga0a205_95233_c1 3300050515 Bacteria 2876
226 nmdc:mga0sz30_14838_c1 3300050516 Bacteria 3073
227 Ga0495601_0013446 3300053077 Bacteria 4924
228 Ga0495612_0032733 3300053078 Bacteria 2101
229 Ga0500644_0000630 3300053088 Bacteria 13175
230 Ga0500556_0000239 3300053104 Bacteria 44477
231 Ga0500593_046892 3300053117 Bacteria 1925
232 Ga0500568_0000049 3300053139 Bacteria 116515
233 Ga0500573_0000964 3300053140 Bacteria 13168
234 Ga0500573_0003469 3300053140 Bacteria 8166
235 Ga0500573_0020725 3300053140 Bacteria 3765
236 Ga0500573_0075985 3300053140 Bacteria 1912
237 Ga0501084_0127048 3300054114 Bacteria 2146
238 Ga0501082_0040849 3300060353 Bacteria 3999
239 Ga0501082_0057248 3300060353 Bacteria 3359
240 Ga0501082_0271802 3300060353 Bacteria 1475
241 2808901283 2808606372 Bacteria 4649509
242 2555229474 2554235227 Bacteria 3637389
243 2586061783 2585427649 Bacteria 9053857
244 2587862489 2585428094 Bacteria 3604039
245 2643766152 2643221549 Bacteria 4042819
246 2643840523 2643221564 Bacteria 4193379
247 2644101355 2643221617 Bacteria 5139111
248 2644113445 2643221619 Bacteria 4158469
249 2644119241 2643221620 Bacteria 5134593
250 2644279227 2643221649 Bacteria 3867359
251 2644457663 2643221681 Bacteria 3707866
252 2644608119 2643221711 Bacteria 4865335
253 2655031488 2654587600 Bacteria 3911798
254 2723641371 2721755702 Bacteria 4373124
255 2812330420 2811994874 Bacteria 5367947
256 2819664757 2818991458 Bacteria 4794049
257 2840879056 2840878972 Bacteria 5483153
258 2857711383 2857710386 Bacteria 3186771
259 2857731613 2857729791 Bacteria 4040535
260 2857732462 2857729791 Bacteria 4040535
261 2870623850 2870622029 Bacteria 3643329
262 2891330860 2891326441 Bacteria 6439512
263 2919052283 2919051321 Bacteria 4210889
264 2919445780 2919443155 Bacteria 4072969
265 2928122802 2928121344 Bacteria 3972376
266 2935410792 2935409751 Bacteria 4179611
267 2966923378 2966921586 Bacteria 3092803
268 2977254025 2977251589 Bacteria 2952848
269 8046353538 8046352972 Bacteria 3613806
270 LJQas_1001313
271 LJQas_1003799
272 rootL2_10044580
273 Ga0006562J51391_1196403
274 JGI25404J52841_10010404
275 Ga0055529_1000899
276 Ga0070658_10013084
277 Ga0070683_100001680
278 Ga0068869_100096016
279 Ga0070661_100040805
280 Ga0070668_100073313
281 Ga0070668_100140787
282 Ga0070675_100050910
283 Ga0070674_100041787
284 Ga0070659_100266727
285 Ga0070711_100150555
286 Ga0070662_100027601
287 Ga0070681_10013839
288 Ga0068867_100191243
289 Ga0068867_100427081
290 Ga0070679_100077774
291 Ga0070684_100072406
292 Ga0068857_100002617
293 Ga0068857_100087460
294 Ga0068852_100103023
295 Ga0068859_100074692
296 Ga0068866_10027587
297 Ga0081455_10001838
298 Ga0081455_10019896
299 Ga0081540_1000766
300 Ga0081540_1009731
301 Ga0075365_10033831
302 Ga0075365_10034641
303 Ga0075368_10000515
304 Ga0075364_10016934
305 Ga0075432_10001009
306 Ga0075432_10003748
307 Ga0075362_10021333
308 Ga0075367_10031762
309 Ga0075370_10002627
310 Ga0075428_100082340
311 Ga0075428_100135782
312 Ga0075428_100170257
313 Ga0075428_100181599
314 Ga0075430_100399965
315 Ga0075433_10008775
316 Ga0075433_10077797
317 Ga0075433_10079212
318 Ga0075434_100010880
319 Ga0075434_100368957
320 Ga0068865_100162286
321 Ga0075436_100002603
322 Ga0097620_100074692
323 Ga0075435_100008074
324 Ga0075435_100032975
325 Ga0105244_10002505
326 Ga0111539_10003578
327 Ga0111539_10446132
328 Ga0111539_10452025
329 Ga0105245_10020400
330 Ga0105245_10274848
331 Ga0105243_10026296
332 Ga0105243_10050810
333 Ga0105242_10118701
334 Ga0105237_10401969
335 Ga0105238_10220535
336 Ga0105238_10296019
337 Ga0105238_10345909
338 Ga0105239_10316004
339 Ga0157371_10045638
340 Ga0157369_10000926
341 Ga0157369_10019808
342 Ga0163162_10029674
343 Ga0163162_10149772
344 Ga0163162_10310173
345 Ga0157372_10178705
346 Ga0157372_10236802
347 Ga0157380_10008828
348 Ga0157380_10125404
349 Ga0163161_10048853
350 Ga0163161_10076645
351 Ga0209672_104204
352 Ga0209258_102686
353 Ga0209455_1001117
354 Ga0207655_1002397
355 Ga0207688_10101372
356 Ga0207695_10429196
357 Ga0207706_10086712
358 Ga0207686_10102463
359 Ga0207709_10061153
360 Ga0207709_10148649
361 Ga0207669_10137344
362 Ga0207704_10070171
363 Ga0207704_10164190
364 Ga0207661_10002162
365 Ga0207712_10166230
366 Ga0207668_10043954
367 Ga0207648_10192820
368 Ga0207674_10187036
369 Ga0207675_100135577
370 Ga0207698_10001941
371 Ga0207698_10361547
372 Ga0207428_10001136
373 Ga0207428_10099560
374 Ga0268265_10335442
375 Ga0265338_10111109
376 Ga0265314_10015254
377 Ga0307409_100039413
378 Ga0307416_100063549
379 Ga0307416_100382167
380 Ga0307415_100154923
381 Ga0373933_0243027
382 Ga0373937_0103366
383 Ga0395899_0001441
384 Ga0395899_0041205
385 Ga0395900_0016382
386 Ga0395900_0029695
387 Ga0395900_0078747
388 Ga0395898_0007619
389 Ga0395898_0008489
390 Ga0395898_0024461
391 Ga0395898_0186812
392 Ga0395905_0009139
393 Ga0395905_0103625
394 Ga0395905_0175033
395 Ga0395901_0029702
396 Ga0395901_0047878
397 Ga0395901_0068495
398 Ga0439465_0036568
399 Ga0451843_0229479
400 Ga0466969_0077221
401 Ga0466965_0003479
402 Ga0466970_0056728
403 Ga0466970_0110052
404 Ga0466960_0027630
405 Ga0466967_0021989
406 Ga0495650_0003628
407 Ga0495628_0193477
408 Ga0495630_0031858
409 Ga0495643_0028394
410 Ga0495634_0066357
411 Ga0495657_0135682
412 Ga0495672_0160559
413 Ga0495673_0063566
414 Ga0495684_0045272
415 Ga0496100_0001753
416 Ga0496101_0095884
417 Ga0496102_0007336
418 Ga0496102_0014741
419 Ga0496103_0006207
420 Ga0496104_0004943
421 Ga0496104_0163126
422 Ga0496105_0012162
423 Ga0496106_0151959
424 Ga0496112_0141094
425 Ga0496114_0007025
426 Ga0496114_0231771
427 Ga0496118_0036470
428 Ga0496119_0056543
429 Ga0496125_0097917
430 Ga0496126_0020169
431 Ga0501031_0001278
432 Ga0501031_0001914
433 Ga0501032_0009327
434 Ga0501032_0018320
435 Ga0501032_0038721
436 Ga0501033_0000028
437 Ga0501033_0018544
438 Ga0501033_0047339
439 Ga0501033_0115169
440 Ga0501034_0000074
441 Ga0501034_0022674
442 Ga0501034_0048506
443 Ga0501036_0019791
444 Ga0501037_0004235
445 Ga0501037_0017488
446 Ga0501037_0202518
447 Ga0501038_0004660
448 Ga0501038_0013319
449 Ga0501038_0039295
450 Ga0501039_0007303
451 Ga0501041_0015694
452 Ga0501042_0004516
453 Ga0501042_0041292
454 Ga0501043_0001830
455 Ga0501043_0009461
456 Ga0501046_0022046
457 Ga0501047_0025059
458 Ga0501047_0065354
459 Ga0501047_0168969
460 Ga0501048_0024634
461 Ga0501068_0014907
462 Ga0501070_0008920
463 Ga0501070_0099084
464 Ga0501080_0009798
465 Ga0501080_0141299
466 Ga0501080_0249136
467 Ga0501081_0025735
468 Ga0501083_0000011
469 Ga0501083_0013892
470 Ga0501083_0038066
471 Ga0501083_0072907
472 Ga0501035_0001366
473 Ga0501035_0026975
474 Ga0501044_0000532
475 Ga0501044_0037295
476 Ga0501044_0241661
477 Ga0501045_0000031
478 Ga0501045_0003513
479 nmdc:mga00v17_32284_c1
480 nmdc:mga0yw44_10855_c1
481 nmdc:mga0yw44_42392_c1
482 nmdc:mga0yw44_5160_c1
483 nmdc:mga06z11_66112_c1
484 nmdc:mga04h51_9200_c1
485 nmdc:mga07m45_14275_c1
486 nmdc:mga06r32_131459_c1
487 nmdc:mga08y16_218540_c1
488 nmdc:mga08y16_8447_c1
489 nmdc:mga0n895_1595_c1
490 nmdc:mga0rr50_4093_c1
491 nmdc:mga0rr50_42609_c1
492 nmdc:mga08x19_1894_c1
493 nmdc:mga0a205_5057_c2
494 nmdc:mga0a205_95233_c1
495 nmdc:mga0sz30_14838_c1
496 Ga0495601_0013446
497 Ga0495612_0032733
498 Ga0500644_0000630
499 Ga0500556_0000239
500 Ga0500593_046892
501 Ga0500568_0000049
502 Ga0500573_0000964
503 Ga0500573_0003469
504 Ga0500573_0020725
505 Ga0500573_0075985
506 Ga0501084_0127048
507 Ga0501082_0040849
508 Ga0501082_0057248
509 Ga0501082_0271802
510 2808901283
511 2555229474
512 2586061783
513 2587862489
514 2643766152
515 2643840523
516 2644101355
517 2644113445
518 2644119241
519 2644279227
520 2644457663
521 2644608119
522 2655031488
523 2723641371
524 2812330420
525 2819664757
526 2840879056
527 2857711383
528 2857731613
529 2857732462
530 2870623850
531 2891330860
532 2919052283
533 2919445780
534 2928122802
535 2935410792
536 2966923378
537 2977254025
538 8046353538

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

7

309

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2i7g-assembly1.cif.gz_A crystal structure of monooxygenase from agrobacterium tumefaciens 0.9546 1 343
2i7g-assembly1.cif.gz_A crystal structure of monooxygenase from agrobacterium tumefaciens 0.9464 1 343
1luc-assembly1.cif.gz_A bacterial luciferase 0.8754 1 339
1luc-assembly1.cif.gz_A bacterial luciferase 0.8629 1 339
7bip-assembly1.cif.gz_B crystal structure of monooxygenase rslo1 from streptomyces bottropensis 0.8586 1 338
ID Description Score Start End Superfamily
2i7gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9505 1 343 3.20.20.30
2i7gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.945 1 343 3.20.20.30
af_Q2G136_3_353_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9422 1 344 3.20.20.30
af_Q2G136_3_353_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9264 1 344 3.20.20.30
6friA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8267 1 336 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A7W3PNT0-F1-model_v4 Alkanesulfonate monooxygenase SsuD/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (Luciferase family) 0.9883 2 346 GO:0004497
GO:0005829
GO:0016705
AF-A0A7W3PNT0-F1-model_v4 Alkanesulfonate monooxygenase SsuD/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (Luciferase family) 0.9826 2 346 GO:0004497
GO:0005829
GO:0016705
AF-R9BXT7-F1-model_v4 deleted 0.982 40 345
AF-A0A4Q3TI97-F1-model_v4 deleted 0.9778 58 344
AF-A0A380GZV4-F1-model_v4 N5,N10-methylenetetrahydromethanopterin reductase 0.9766 235 346 GO:0004497
GO:0005829
GO:0016705

Map