F375784

General Info

Members Datasets Scaffolds Average Seq Length
268 156 268 371

Family's Representative Sequence

Representative Sequence 3300049522|Ga0501299_009234|Ga0501299_009234_379_1593
Length 404
Sequence MSVIQQTAHTCRAWPRPAPGLAPVVAILTTLLAVGCSTPQNGQSGATSTAERKNPAPPIAAAPFGKQGETPVQLYTLTNTNGLVAKITNYGAIVTELHVPDRAGTLADIVLGFDNLDGYVKGSPYFGAIVGRVANRIRNAEFMLEGQRYTLAANDKPHHLHGGTKGWDKVMWSATPIETTEGPALELTYVSRDGEEGYPGSVTARTIYTLTNANELKVDMQATTDKTTLVNIAHHSYWNLGGHNSGTILDHELTLYADRYTPGSPMVPYGEITPVKGTPFDFTSAKPIGKELQQAGGTPIGYDHNFIVNGELNQLRPVARLKDPQSGRVMTVSADQPGLQFYTGNFLDGSIRGKNATYVQYAALCLETQKFPNAINVPAWRDQVILRPGQTYRHMMVHTFSVEP

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
104 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
105 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
108 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
109 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
110 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
111 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
112 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
113 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
114 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
122 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
127 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
128 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
129 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
130 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
131 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
132 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
133 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 1.49
Rhizosphere 96.64
Stem 0
Stem Tuber 0
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000535 3300003203 Bacteria 17768
2 rootH2_10158650 3300003320 Bacteria 3259
3 rootH2_10286033 3300003320 Bacteria 1986
4 rootH1_10105231 3300003323 Bacteria 3129
5 rootH1_10196660 3300003323 Bacteria 7559
6 Ga0032354_1066396 3300003693 Bacteria 2677
7 Ga0065712_10082312 3300005290 Unclassified 2927
8 Ga0065707_10102782 3300005295 Bacteria 2785
9 Ga0065707_10140964 3300005295 Bacteria 1773
10 Ga0065707_10174141 3300005295 Bacteria 1463
11 Ga0070658_10004001 3300005327 Bacteria 12081
12 Ga0070676_10058137 3300005328 Bacteria 2290
13 Ga0070676_10072938 3300005328 Unclassified 2065
14 Ga0070683_100115530 3300005329 Bacteria 2534
15 Ga0070670_100025123 3300005331 Bacteria 5126
16 Ga0070670_100134633 3300005331 Bacteria 2135
17 Ga0070670_100147274 3300005331 Bacteria 2037
18 Ga0070677_10013938 3300005333 Bacteria 2822
19 Ga0068869_100000001 3300005334 Bacteria 178472
20 Ga0068869_100002621 3300005334 Bacteria 10853
21 Ga0070666_10088831 3300005335 Bacteria 2121
22 Ga0070682_100001788 3300005337 Bacteria 11993
23 Ga0070682_100009919 3300005337 Bacteria 5394
24 Ga0070689_100000004 3300005340 Bacteria 497771
25 Ga0070689_100101286 3300005340 Bacteria 2280
26 Ga0070689_100169178 3300005340 Bacteria 1770
27 Ga0070669_100050017 3300005353 Bacteria 3052
28 Ga0070675_100015998 3300005354 Bacteria 5944
29 Ga0070675_100056649 3300005354 Bacteria 3230
30 Ga0070675_100065986 3300005354 Bacteria 2993
31 Ga0070675_100097770 3300005354 Bacteria 2468
32 Ga0070675_100129130 3300005354 Bacteria 2152
33 Ga0070671_100006395 3300005355 Bacteria 9412
34 Ga0070671_100149682 3300005355 Bacteria 1971
35 Ga0070674_100061070 3300005356 Bacteria 2629
36 Ga0070673_100011653 3300005364 Bacteria 6008
37 Ga0070673_100073086 3300005364 Bacteria 2760
38 Ga0070673_100076377 3300005364 Bacteria 2705
39 Ga0070673_100144989 3300005364 Bacteria 2007
40 Ga0070714_100000037 3300005435 Bacteria 124801
41 Ga0070700_100001380 3300005441 Bacteria 12070
42 Ga0070678_100080249 3300005456 Bacteria 2470
43 Ga0070681_10114199 3300005458 Bacteria 2640
44 Ga0068867_100002122 3300005459 Bacteria 13909
45 Ga0068867_100006614 3300005459 Bacteria 8195
46 Ga0068867_100014273 3300005459 Bacteria 5627
47 Ga0070685_10104239 3300005466 Bacteria 1736
48 Ga0070699_100058889 3300005518 Bacteria 3328
49 Ga0070679_100013484 3300005530 Bacteria 7827
50 Ga0070684_100101638 3300005535 Bacteria 2569
51 Ga0070672_100049294 3300005543 Bacteria 3276
52 Ga0070686_100138820 3300005544 Bacteria 1689
53 Ga0068855_100099329 3300005563 Bacteria 3352
54 Ga0068857_100085410 3300005577 Bacteria 2821
55 Ga0068857_100125709 3300005577 Bacteria 2310
56 Ga0070702_100085040 3300005615 Bacteria 1904
57 Ga0068859_100014286 3300005617 Bacteria 7964
58 Ga0068859_100289897 3300005617 Bacteria 1730
59 Ga0068866_10011336 3300005718 Bacteria 3855
60 Ga0068861_100132598 3300005719 Bacteria 2024
61 Ga0068861_100228969 3300005719 Bacteria 1575
62 Ga0068858_100132892 3300005842 Bacteria 2334
63 Ga0068858_100135371 3300005842 Bacteria 2312
64 Ga0068860_100061785 3300005843 Bacteria 3559
65 Ga0068862_100084767 3300005844 Bacteria 2753
66 Ga0081539_10000065 3300005985 Bacteria 246571
67 Ga0097621_100025951 3300006237 Bacteria 4591
68 Ga0097621_100190660 3300006237 Unclassified 1775
69 Ga0068871_100012900 3300006358 Bacteria 6189
70 Ga0068871_100013581 3300006358 Bacteria 6046
71 Ga0075428_100410226 3300006844 Bacteria 1451
72 Ga0075430_100017137 3300006846 Bacteria 6170
73 Ga0075431_100004116 3300006847 Bacteria 14201
74 Ga0075431_100011670 3300006847 Bacteria 8864
75 Ga0068865_100013782 3300006881 Bacteria 5123
76 Ga0068865_100015451 3300006881 Bacteria 4868
77 Ga0068865_100375814 3300006881 Unclassified 1158
78 Ga0097620_100014286 3300006931 Bacteria 7964
79 Ga0097620_100289900 3300006931 Bacteria 1730
80 Ga0075435_100095413 3300007076 Bacteria 2460
81 Ga0075435_100124615 3300007076 Bacteria 2152
82 Ga0105240_10000022 3300009093 Bacteria 387911
83 Ga0105240_10023075 3300009093 Bacteria 8241
84 Ga0111539_10000949 3300009094 Bacteria 38012
85 Ga0111539_10004119 3300009094 Bacteria 19078
86 Ga0111539_10009292 3300009094 Bacteria 12415
87 Ga0111539_10025593 3300009094 Bacteria 7233
88 Ga0111539_10357207 3300009094 Bacteria 1700
89 Ga0111539_10394744 3300009094 Bacteria 1611
90 Ga0105245_10238416 3300009098 Bacteria 1762
91 Ga0114129_10081920 3300009147 Bacteria 4485
92 Ga0105243_10117610 3300009148 Bacteria 2235
93 Ga0105243_10157031 3300009148 Bacteria 1957
94 Ga0105242_10016458 3300009176 Bacteria 5749
95 Ga0105237_10000046 3300009545 Bacteria 168707
96 Ga0105238_10006035 3300009551 Bacteria 12012
97 Ga0105238_10006341 3300009551 Bacteria 11762
98 Ga0105238_10234514 3300009551 Bacteria 1812
99 Ga0105239_10168001 3300010375 Bacteria 2453
100 Ga0105239_10493052 3300010375 Bacteria 1392
101 Ga0157378_10158592 3300013297 Bacteria 2114
102 Ga0157375_10070471 3300013308 Bacteria 3506
103 Ga0157375_10432945 3300013308 Bacteria 1481
104 Ga0163163_10007402 3300014325 Bacteria 9693
105 Ga0163163_10227260 3300014325 Bacteria 1915
106 Ga0157380_10004638 3300014326 Bacteria 9554
107 Ga0157380_10385409 3300014326 Bacteria 1324
108 Ga0157377_10017366 3300014745 Bacteria 3720
109 Ga0157376_10025080 3300014969 Bacteria 4692
110 Ga0157376_10351681 3300014969 Bacteria 1410
111 Ga0157376_10373241 3300014969 Bacteria 1372
112 Ga0163161_10010397 3300017792 Bacteria 6445
113 Ga0207682_10007573 3300025893 Bacteria 4324
114 Ga0207682_10010708 3300025893 Bacteria 3588
115 Ga0207645_10006018 3300025907 Bacteria 8725
116 Ga0207645_10102092 3300025907 Bacteria 1851
117 Ga0207643_10007624 3300025908 Bacteria 5816
118 Ga0207695_10000022 3300025913 Bacteria 659090
119 Ga0207695_10002791 3300025913 Bacteria 25413
120 Ga0207671_10000268 3300025914 Bacteria 77496
121 Ga0207662_10051910 3300025918 Bacteria 2440
122 Ga0207652_10006099 3300025921 Bacteria 9750
123 Ga0207652_10011924 3300025921 Bacteria 7014
124 Ga0207681_10072135 3300025923 Bacteria 2411
125 Ga0207694_10010829 3300025924 Bacteria 6884
126 Ga0207650_10010799 3300025925 Bacteria 6272
127 Ga0207650_10020052 3300025925 Bacteria 4709
128 Ga0207659_10001813 3300025926 Bacteria 12644
129 Ga0207659_10003836 3300025926 Bacteria 9060
130 Ga0207659_10024057 3300025926 Bacteria 4075
131 Ga0207659_10027928 3300025926 Bacteria 3828
132 Ga0207659_10201084 3300025926 Bacteria 1591
133 Ga0207659_10234703 3300025926 Bacteria 1481
134 Ga0207664_10000020 3300025929 Bacteria 218362
135 Ga0207644_10001748 3300025931 Bacteria 14056
136 Ga0207706_10064994 3300025933 Bacteria 3212
137 Ga0207709_10013418 3300025935 Bacteria 4522
138 Ga0207670_10000007 3300025936 Bacteria 376171
139 Ga0207670_10021866 3300025936 Bacteria 3953
140 Ga0207669_10017088 3300025937 Bacteria 3710
141 Ga0207704_10000837 3300025938 Bacteria 13629
142 Ga0207691_10013218 3300025940 Bacteria 7906
143 Ga0207691_10027868 3300025940 Bacteria 5293
144 Ga0207691_10050943 3300025940 Bacteria 3788
145 Ga0207691_10055001 3300025940 Bacteria 3629
146 Ga0207689_10000631 3300025942 Bacteria 33594
147 Ga0207689_10000692 3300025942 Bacteria 32300
148 Ga0207689_10143973 3300025942 Bacteria 1964
149 Ga0207661_10188700 3300025944 Unclassified 1806
150 Ga0207679_10017653 3300025945 Bacteria 4764
151 Ga0207651_10018739 3300025960 Bacteria 4128
152 Ga0207651_10026507 3300025960 Bacteria 3622
153 Ga0207651_10091253 3300025960 Bacteria 2230
154 Ga0207668_10066639 3300025972 Bacteria 2553
155 Ga0207640_10078561 3300025981 Bacteria 2247
156 Ga0207677_10035538 3300026023 Bacteria 3238
157 Ga0207703_10110301 3300026035 Bacteria 2347
158 Ga0207703_10161725 3300026035 Bacteria 1962
159 Ga0207708_10009494 3300026075 Bacteria 7209
160 Ga0207702_10131344 3300026078 Bacteria 2254
161 Ga0207641_10335325 3300026088 Bacteria 1438
162 Ga0207648_10001662 3300026089 Bacteria 24362
163 Ga0207648_10008211 3300026089 Bacteria 10142
164 Ga0207648_10105728 3300026089 Bacteria 2469
165 Ga0207648_10127625 3300026089 Unclassified 2237
166 Ga0207676_10096143 3300026095 Bacteria 2444
167 Ga0207674_10043163 3300026116 Bacteria 4651
168 Ga0207674_10111333 3300026116 Bacteria 2712
169 Ga0207675_100019214 3300026118 Bacteria 6376
170 Ga0207675_100065026 3300026118 Bacteria 3409
171 Ga0207675_100152189 3300026118 Bacteria 2202
172 Ga0207675_100221599 3300026118 Bacteria 1823
173 Ga0207675_100281567 3300026118 Bacteria 1616
174 Ga0207675_100293140 3300026118 Bacteria 1583
175 Ga0207683_10112458 3300026121 Bacteria 2438
176 Ga0207428_10009172 3300027907 Bacteria 8888
177 Ga0207428_10142628 3300027907 Bacteria 1827
178 Ga0268264_10058179 3300028381 Bacteria 3236
179 Ga0265319_1001354 3300028563 Bacteria 14732
180 Ga0265319_1006440 3300028563 Bacteria 5436
181 Ga0265334_10019602 3300028573 Bacteria 2780
182 Ga0265318_10000042 3300028577 Bacteria 130384
183 Ga0265318_10000053 3300028577 Bacteria 115241
184 Ga0265318_10000357 3300028577 Bacteria 36336
185 Ga0265318_10001510 3300028577 Bacteria 13570
186 Ga0265338_10013148 3300028800 Bacteria 9373
187 Ga0265324_10013279 3300029957 Bacteria 3078
188 Ga0265330_10000026 3300031235 Bacteria 140332
189 Ga0265330_10000048 3300031235 Bacteria 104793
190 Ga0265332_10000257 3300031238 Bacteria 42299
191 Ga0265332_10000770 3300031238 Bacteria 19733
192 Ga0265332_10001456 3300031238 Bacteria 13266
193 Ga0265328_10000525 3300031239 Bacteria 17862
194 Ga0265328_10022746 3300031239 Unclassified 2382
195 Ga0265320_10000079 3300031240 Bacteria 83732
196 Ga0265320_10000223 3300031240 Bacteria 46106
197 Ga0265320_10002917 3300031240 Bacteria 11712
198 Ga0265329_10002890 3300031242 Bacteria 7638
199 Ga0265339_10000254 3300031249 Bacteria 42933
200 Ga0265339_10042023 3300031249 Unclassified 2533
201 Ga0265331_10000010 3300031250 Bacteria 312076
202 Ga0265331_10000615 3300031250 Bacteria 30977
203 Ga0265331_10003046 3300031250 Bacteria 11000
204 Ga0265316_10000896 3300031344 Bacteria 32609
205 Ga0265316_10002787 3300031344 Bacteria 17911
206 Ga0265316_10002943 3300031344 Bacteria 17434
207 Ga0265316_10011412 3300031344 Bacteria 8016
208 Ga0265313_10000412 3300031595 Bacteria 45964
209 Ga0265313_10000814 3300031595 Bacteria 31531
210 Ga0265314_10000003 3300031711 Bacteria 1653386
211 Ga0265314_10000035 3300031711 Bacteria 240629
212 Ga0265314_10000342 3300031711 Bacteria 65026
213 Ga0265314_10010664 3300031711 Bacteria 7646
214 Ga0265342_10002182 3300031712 Bacteria 17209
215 Ga0265342_10002451 3300031712 Bacteria 15995
216 Ga0265342_10021196 3300031712 Bacteria 4154
217 Ga0307405_10000207 3300031731 Bacteria 21153
218 Ga0307405_10058044 3300031731 Bacteria 2434
219 Ga0307413_10004665 3300031824 Bacteria 6004
220 Ga0307410_10000834 3300031852 Bacteria 13106
221 Ga0307407_10015393 3300031903 Bacteria 3780
222 Ga0307416_100002025 3300032002 Bacteria 11394
223 Ga0307411_10013806 3300032005 Bacteria 4473
224 Ga0307415_100061659 3300032126 Bacteria 2598
225 Ga0373953_0055071 3300035117 Bacteria 1614
226 Ga0373954_0044764 3300035118 Bacteria 2066
227 Ga0373956_0073077 3300035119 Bacteria 1567
228 Ga0373957_0032196 3300035120 Bacteria 1930
229 Ga0373957_0048699 3300035120 Bacteria 1616
230 Ga0373955_0018225 3300035172 Bacteria 3488
231 Ga0373924_0064055 3300035410 Bacteria 1543
232 Ga0373933_0081850 3300035724 Bacteria 1981
233 Ga0373937_0000511 3300036401 Bacteria 35044
234 Ga0373937_0155661 3300036401 Bacteria 2142
235 Ga0373937_0184574 3300036401 Bacteria 1959
236 Ga0373937_0325794 3300036401 Unclassified 1454
237 Ga0373937_0533627 3300036401 Bacteria 1115
238 Ga0451576_0039722 3300045051 Bacteria 4981
239 Ga0495598_0031975 3300046537 Bacteria 1484
240 Ga0495684_0071070 3300047471 Bacteria 2645
241 Ga0496104_0146921 3300048907 Bacteria 2264
242 Ga0496114_0034317 3300048917 Bacteria 4185
243 Ga0496114_0041948 3300048917 Bacteria 3792
244 Ga0496114_0140513 3300048917 Bacteria 2090
245 Ga0501299_009234 3300049522 Bacteria 1622
246 Ga0501039_0017547 3300049575 Bacteria 5491
247 Ga0501041_0158529 3300049577 Unclassified 1414
248 Ga0501042_0031993 3300049578 Bacteria 3723
249 Ga0501068_0139051 3300049584 Bacteria 1522
250 Ga0501072_0291624 3300049588 Unclassified 1297
251 Ga0501073_0021462 3300049589 Bacteria 4656
252 Ga0501073_0039757 3300049589 Bacteria 3331
253 Ga0501075_0060404 3300049591 Bacteria 2856
254 Ga0501079_0016821 3300049741 Bacteria 5583
255 Ga0501081_0071428 3300049743 Bacteria 2420
256 nmdc:mga09592_114054_c1 3300050508 Bacteria 2319
257 nmdc:mga09592_260421_c1 3300050508 Unclassified 1504
258 nmdc:mga0qj67_4546_c1 3300050509 Bacteria 10053
259 nmdc:mga08y16_315371_c1 3300050511 Bacteria 1610
260 nmdc:mga08y16_4774_c1 3300050511 Bacteria 14141
261 nmdc:mga08y16_4806_c1 3300050511 Bacteria 14094
262 nmdc:mga08y16_6468_c1 3300050511 Bacteria 12295
263 nmdc:mga08y16_80641_c1 3300050511 Bacteria 3393
264 nmdc:mga0a205_240772_c1 3300050515 Unclassified 1690
265 Ga0495601_0132655 3300053077 Bacteria 1623
266 Ga0500555_018639 3300053103 Bacteria 2001
267 Ga0501084_0041464 3300054114 Bacteria 3851
268 Ga0590075_011724 3300059424 Bacteria 2122

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026118 Ga0207675_100281567 Ga0207675_1002815672 327
2 3300035119 Ga0373956_0073077 Ga0373956_0073077_232_1320 331
3 3300035120 Ga0373957_0048699 Ga0373957_0048699_200_1288 331
4 3300035410 Ga0373924_0064055 Ga0373924_0064055_84_1172 331
5 3300025918 Ga0207662_10051910 Ga0207662_100519102 333
6 3300025981 Ga0207640_10078561 Ga0207640_100785612 333
7 3300026121 Ga0207683_10112458 Ga0207683_101124582 333
8 3300028381 Ga0268264_10058179 Ga0268264_100581793 333
9 3300049584 Ga0501068_0139051 Ga0501068_0139051_212_1216 334
10 3300036401 Ga0373937_0155661 Ga0373937_0155661_117_1133 335
11 3300005435 Ga0070714_100000037 Ga0070714_10000003746 336
12 3300025929 Ga0207664_10000020 Ga0207664_10000020144 336
13 3300009098 Ga0105245_10238416 Ga0105245_102384161 338
14 3300009176 Ga0105242_10016458 Ga0105242_100164582 338
15 3300014969 Ga0157376_10351681 Ga0157376_103516811 338
16 3300028800 Ga0265338_10013148 Ga0265338_100131481 339
17 3300029957 Ga0265324_10013279 Ga0265324_100132793 339
18 3300059424 Ga0590075_011724 Ga0590075_011724_143_1336 339
19 3300009093 Ga0105240_10000022 Ga0105240_100000223 340
20 3300010375 Ga0105239_10168001 Ga0105239_101680012 340
21 3300014326 Ga0157380_10385409 Ga0157380_103854091 340
22 3300025913 Ga0207695_10000022 Ga0207695_10000022516 340
23 3300003320 rootH2_10158650 rootH2_101586504 342
24 3300003323 rootH1_10196660 rootH1_101966609 342
25 3300003693 Ga0032354_1066396 Ga0032354_10663962 344
26 3300009094 Ga0111539_10000949 Ga0111539_1000094922 344
27 3300049589 Ga0501073_0039757 Ga0501073_0039757_805_1917 344
28 3300050511 nmdc:mga08y16_4774_c1 nmdc:mga08y16_4774_c1_3963_5006 344
29 3300050515 nmdc:mga0a205_240772_c1 nmdc:mga0a205_240772_c1_642_1676 344
30 3300005530 Ga0070679_100013484 Ga0070679_1000134843 345
31 3300025921 Ga0207652_10011924 Ga0207652_100119245 345
32 3300005327 Ga0070658_10004001 Ga0070658_100040012 346
33 3300005337 Ga0070682_100009919 Ga0070682_1000099196 346
34 3300005340 Ga0070689_100000004 Ga0070689_100000004300 346
35 3300005458 Ga0070681_10114199 Ga0070681_101141992 346
36 3300005563 Ga0068855_100099329 Ga0068855_1000993293 346
37 3300005577 Ga0068857_100085410 Ga0068857_1000854102 346
38 3300009093 Ga0105240_10023075 Ga0105240_100230756 346
39 3300009545 Ga0105237_10000046 Ga0105237_1000004690 346
40 3300009551 Ga0105238_10006035 Ga0105238_100060357 346
41 3300009551 Ga0105238_10234514 Ga0105238_102345142 346
42 3300010375 Ga0105239_10493052 Ga0105239_104930521 346
43 3300025913 Ga0207695_10002791 Ga0207695_100027916 346
44 3300025914 Ga0207671_10000268 Ga0207671_1000026827 346
45 3300025921 Ga0207652_10006099 Ga0207652_100060995 346
46 3300025936 Ga0207670_10000007 Ga0207670_10000007260 346
47 3300025944 Ga0207661_10188700 Ga0207661_101887002 346
48 3300026078 Ga0207702_10131344 Ga0207702_101313442 346
49 3300026116 Ga0207674_10043163 Ga0207674_100431635 346
50 3300026118 Ga0207675_100065026 Ga0207675_1000650262 346
51 3300028577 Ga0265318_10000042 Ga0265318_1000004217 346
52 3300031235 Ga0265330_10000026 Ga0265330_1000002628 346
53 3300031238 Ga0265332_10000257 Ga0265332_1000025727 346
54 3300031239 Ga0265328_10022746 Ga0265328_100227462 346
55 3300031240 Ga0265320_10000079 Ga0265320_1000007934 346
56 3300031249 Ga0265339_10042023 Ga0265339_100420232 346
57 3300031250 Ga0265331_10000010 Ga0265331_10000010233 346
58 3300031344 Ga0265316_10002787 Ga0265316_100027879 346
59 3300031595 Ga0265313_10000814 Ga0265313_1000081410 346
60 3300031711 Ga0265314_10000035 Ga0265314_1000003534 346
61 3300031712 Ga0265342_10002451 Ga0265342_100024517 346
62 3300035117 Ga0373953_0055071 Ga0373953_0055071_83_1129 346
63 3300035118 Ga0373954_0044764 Ga0373954_0044764_678_1724 346
64 3300035120 Ga0373957_0032196 Ga0373957_0032196_518_1564 346
65 3300035172 Ga0373955_0018225 Ga0373955_0018225_2027_3073 346
66 3300035724 Ga0373933_0081850 Ga0373933_0081850_259_1305 346
67 3300036401 Ga0373937_0000511 Ga0373937_0000511_31602_32648 346
68 3300036401 Ga0373937_0184574 Ga0373937_0184574_409_1455 346
69 3300036401 Ga0373937_0325794 Ga0373937_0325794_340_1425 346
70 3300036401 Ga0373937_0533627 Ga0373937_0533627_53_1099 346
71 3300045051 Ga0451576_0039722 Ga0451576_0039722_2495_3577 346
72 3300047471 Ga0495684_0071070 Ga0495684_0071070_140_1186 346
73 3300048907 Ga0496104_0146921 Ga0496104_0146921_1019_2065 346
74 3300048917 Ga0496114_0034317 Ga0496114_0034317_1353_2513 346
75 3300048917 Ga0496114_0140513 Ga0496114_0140513_954_2000 346
76 3300053077 Ga0495601_0132655 Ga0495601_0132655_286_1335 346
77 3300053103 Ga0500555_018639 Ga0500555_018639_71_1120 346
78 3300009148 Ga0105243_10157031 Ga0105243_101570312 349
79 3300009094 Ga0111539_10025593 Ga0111539_100255935 352
80 3300028577 Ga0265318_10000053 Ga0265318_1000005384 352
81 3300031235 Ga0265330_10000048 Ga0265330_1000004884 352
82 3300031238 Ga0265332_10000770 Ga0265332_100007706 352
83 3300031240 Ga0265320_10000223 Ga0265320_1000022324 352
84 3300031250 Ga0265331_10000615 Ga0265331_1000061524 352
85 3300031344 Ga0265316_10002943 Ga0265316_1000294310 352
86 3300031595 Ga0265313_10000412 Ga0265313_1000041221 352
87 3300031711 Ga0265314_10000342 Ga0265314_1000034221 352
88 3300031712 Ga0265342_10021196 Ga0265342_100211962 352
89 3300050511 nmdc:mga08y16_80641_c1 nmdc:mga08y16_80641_c1_887_2155 352
90 3300025972 Ga0207668_10066639 Ga0207668_100666391 353
91 3300025924 Ga0207694_10010829 Ga0207694_100108295 354
92 3300005535 Ga0070684_100101638 Ga0070684_1001016382 355
93 3300026118 Ga0207675_100293140 Ga0207675_1002931402 356
94 3300014325 Ga0163163_10227260 Ga0163163_102272602 357
95 3300006358 Ga0068871_100013581 Ga0068871_1000135813 358
96 3300014969 Ga0157376_10025080 Ga0157376_100250802 358
97 3300014969 Ga0157376_10373241 Ga0157376_103732411 358
98 3300031731 Ga0307405_10058044 Ga0307405_100580443 358
99 3300003323 rootH1_10105231 rootH1_101052312 359
100 3300005334 Ga0068869_100000001 Ga0068869_10000000132 359
101 3300005459 Ga0068867_100002122 Ga0068867_1000021229 359
102 3300006358 Ga0068871_100012900 Ga0068871_1000129005 359
103 3300006881 Ga0068865_100013782 Ga0068865_1000137824 359
104 3300025938 Ga0207704_10000837 Ga0207704_1000083712 359
105 3300025942 Ga0207689_10000631 Ga0207689_100006315 359
106 3300026023 Ga0207677_10035538 Ga0207677_100355382 359
107 3300026089 Ga0207648_10105728 Ga0207648_101057282 359
108 3300028563 Ga0265319_1001354 Ga0265319_10013546 359
109 3300028577 Ga0265318_10001510 Ga0265318_100015105 359
110 3300031240 Ga0265320_10002917 Ga0265320_100029174 359
111 3300048917 Ga0496114_0041948 Ga0496114_0041948_2224_3369 359
112 3300003320 rootH2_10286033 rootH2_102860331 360
113 3300005331 Ga0070670_100025123 Ga0070670_1000251232 360
114 3300006847 Ga0075431_100004116 Ga0075431_1000041162 360
115 3300025925 Ga0207650_10010799 Ga0207650_100107993 360
116 3300025945 Ga0207679_10017653 Ga0207679_100176533 360
117 3300027907 Ga0207428_10009172 Ga0207428_100091727 360
118 3300027907 Ga0207428_10142628 Ga0207428_101426282 360
119 3300005354 Ga0070675_100097770 Ga0070675_1000977703 361
120 3300005337 Ga0070682_100001788 Ga0070682_10000178810 362
121 3300025940 Ga0207691_10050943 Ga0207691_100509433 362
122 3300031731 Ga0307405_10000207 Ga0307405_100002076 362
123 3300031824 Ga0307413_10004665 Ga0307413_100046654 362
124 3300031852 Ga0307410_10000834 Ga0307410_100008342 362
125 3300031903 Ga0307407_10015393 Ga0307407_100153932 362
126 3300032002 Ga0307416_100002025 Ga0307416_1000020252 362
127 3300032005 Ga0307411_10013806 Ga0307411_100138063 362
128 3300032126 Ga0307415_100061659 Ga0307415_1000616592 362
129 3300005328 Ga0070676_10072938 Ga0070676_100729382 363
130 3300005459 Ga0068867_100006614 Ga0068867_1000066146 363
131 3300007076 Ga0075435_100124615 Ga0075435_1001246152 363
132 3300025907 Ga0207645_10102092 Ga0207645_101020922 363
133 3300025923 Ga0207681_10072135 Ga0207681_100721352 363
134 3300026089 Ga0207648_10008211 Ga0207648_100082115 363
135 3300005290 Ga0065712_10082312 Ga0065712_100823121 364
136 3300005340 Ga0070689_100101286 Ga0070689_1001012863 364
137 3300005354 Ga0070675_100129130 Ga0070675_1001291302 364
138 3300005355 Ga0070671_100149682 Ga0070671_1001496822 364
139 3300005364 Ga0070673_100144989 Ga0070673_1001449892 364
140 3300005842 Ga0068858_100135371 Ga0068858_1001353712 364
141 3300014325 Ga0163163_10007402 Ga0163163_100074022 364
142 3300025926 Ga0207659_10234703 Ga0207659_102347031 364
143 3300025936 Ga0207670_10021866 Ga0207670_100218662 364
144 3300025940 Ga0207691_10027868 Ga0207691_100278683 364
145 3300026035 Ga0207703_10161725 Ga0207703_101617251 364
146 3300026088 Ga0207641_10335325 Ga0207641_103353252 364
147 3300028563 Ga0265319_1006440 Ga0265319_10064403 364
148 3300028573 Ga0265334_10019602 Ga0265334_100196021 364
149 3300028577 Ga0265318_10000357 Ga0265318_1000035725 364
150 3300031238 Ga0265332_10001456 Ga0265332_100014564 364
151 3300031239 Ga0265328_10000525 Ga0265328_100005253 364
152 3300031242 Ga0265329_10002890 Ga0265329_100028903 364
153 3300031250 Ga0265331_10003046 Ga0265331_100030463 364
154 3300031344 Ga0265316_10011412 Ga0265316_100114123 364
155 3300031711 Ga0265314_10010664 Ga0265314_100106643 364
156 3300031712 Ga0265342_10002182 Ga0265342_100021823 364
157 3300049589 Ga0501073_0021462 Ga0501073_0021462_3040_4251 364
158 3300050508 nmdc:mga09592_114054_c1 nmdc:mga09592_114054_c1_731_1873 364
159 3300005617 Ga0068859_100014286 Ga0068859_1000142866 365
160 3300006237 Ga0097621_100190660 Ga0097621_1001906602 365
161 3300006931 Ga0097620_100014286 Ga0097620_1000142866 365
162 3300026095 Ga0207676_10096143 Ga0207676_100961431 365
163 3300005328 Ga0070676_10058137 Ga0070676_100581372 366
164 3300005333 Ga0070677_10013938 Ga0070677_100139382 366
165 3300005334 Ga0068869_100002621 Ga0068869_1000026212 366
166 3300005354 Ga0070675_100015998 Ga0070675_1000159983 366
167 3300005441 Ga0070700_100001380 Ga0070700_1000013806 366
168 3300005459 Ga0068867_100014273 Ga0068867_1000142734 366
169 3300005543 Ga0070672_100049294 Ga0070672_1000492943 366
170 3300005544 Ga0070686_100138820 Ga0070686_1001388202 366
171 3300005615 Ga0070702_100085040 Ga0070702_1000850401 366
172 3300005718 Ga0068866_10011336 Ga0068866_100113362 366
173 3300005719 Ga0068861_100132598 Ga0068861_1001325982 366
174 3300005843 Ga0068860_100061785 Ga0068860_1000617853 366
175 3300006881 Ga0068865_100015451 Ga0068865_1000154512 366
176 3300006881 Ga0068865_100375814 Ga0068865_1003758141 366
177 3300009148 Ga0105243_10117610 Ga0105243_101176102 366
178 3300025893 Ga0207682_10007573 Ga0207682_100075734 366
179 3300025907 Ga0207645_10006018 Ga0207645_100060182 366
180 3300025908 Ga0207643_10007624 Ga0207643_100076242 366
181 3300025926 Ga0207659_10001813 Ga0207659_100018136 366
182 3300025933 Ga0207706_10064994 Ga0207706_100649942 366
183 3300025935 Ga0207709_10013418 Ga0207709_100134182 366
184 3300025937 Ga0207669_10017088 Ga0207669_100170882 366
185 3300025940 Ga0207691_10055001 Ga0207691_100550013 366
186 3300025942 Ga0207689_10000692 Ga0207689_1000069216 366
187 3300025960 Ga0207651_10018739 Ga0207651_100187392 366
188 3300026075 Ga0207708_10009494 Ga0207708_100094945 366
189 3300026089 Ga0207648_10001662 Ga0207648_100016624 366
190 3300026118 Ga0207675_100019214 Ga0207675_1000192142 366
191 3300031249 Ga0265339_10000254 Ga0265339_1000025436 367
192 3300031344 Ga0265316_10000896 Ga0265316_1000089628 367
193 3300031711 Ga0265314_10000003 Ga0265314_10000003833 367
194 3300005331 Ga0070670_100134633 Ga0070670_1001346331 368
195 3300005355 Ga0070671_100006395 Ga0070671_1000063955 368
196 3300005364 Ga0070673_100073086 Ga0070673_1000730862 368
197 3300005364 Ga0070673_100076377 Ga0070673_1000763772 368
198 3300005617 Ga0068859_100289897 Ga0068859_1002898972 368
199 3300005842 Ga0068858_100132892 Ga0068858_1001328922 368
200 3300006931 Ga0097620_100289900 Ga0097620_1002899002 368
201 3300009094 Ga0111539_10394744 Ga0111539_103947441 368
202 3300013297 Ga0157378_10158592 Ga0157378_101585922 368
203 3300025926 Ga0207659_10027928 Ga0207659_100279282 368
204 3300025931 Ga0207644_10001748 Ga0207644_100017486 368
205 3300025960 Ga0207651_10026507 Ga0207651_100265073 368
206 3300025960 Ga0207651_10091253 Ga0207651_100912532 368
207 3300026035 Ga0207703_10110301 Ga0207703_101103011 368
208 3300050511 nmdc:mga08y16_315371_c1 nmdc:mga08y16_315371_c1_326_1549 368
209 3300005295 Ga0065707_10140964 Ga0065707_101409641 369
210 3300005329 Ga0070683_100115530 Ga0070683_1001155302 369
211 3300005340 Ga0070689_100169178 Ga0070689_1001691781 369
212 3300005353 Ga0070669_100050017 Ga0070669_1000500172 369
213 3300005354 Ga0070675_100065986 Ga0070675_1000659861 369
214 3300005456 Ga0070678_100080249 Ga0070678_1000802492 369
215 3300005466 Ga0070685_10104239 Ga0070685_101042392 369
216 3300005844 Ga0068862_100084767 Ga0068862_1000847674 369
217 3300006237 Ga0097621_100025951 Ga0097621_1000259513 369
218 3300007076 Ga0075435_100095413 Ga0075435_1000954131 369
219 3300009094 Ga0111539_10004119 Ga0111539_1000411911 369
220 3300009551 Ga0105238_10006341 Ga0105238_100063412 369
221 3300013308 Ga0157375_10070471 Ga0157375_100704713 369
222 3300014326 Ga0157380_10004638 Ga0157380_100046386 369
223 3300025926 Ga0207659_10024057 Ga0207659_100240572 369
224 3300026118 Ga0207675_100152189 Ga0207675_1001521892 369
225 3300049575 Ga0501039_0017547 Ga0501039_0017547_301_1425 369
226 3300049577 Ga0501041_0158529 Ga0501041_0158529_127_1251 369
227 3300049578 Ga0501042_0031993 Ga0501042_0031993_1744_2868 369
228 3300049588 Ga0501072_0291624 Ga0501072_0291624_137_1261 369
229 3300049591 Ga0501075_0060404 Ga0501075_0060404_54_1178 369
230 3300049741 Ga0501079_0016821 Ga0501079_0016821_3877_5001 369
231 3300049743 Ga0501081_0071428 Ga0501081_0071428_772_1896 369
232 3300050511 nmdc:mga08y16_4806_c1 nmdc:mga08y16_4806_c1_73_1251 369
233 3300054114 Ga0501084_0041464 Ga0501084_0041464_891_2015 369
234 3300003203 JGI25406J46586_10000535 JGI25406J46586_100005358 370
235 3300005295 Ga0065707_10102782 Ga0065707_101027822 370
236 3300005295 Ga0065707_10174141 Ga0065707_101741411 370
237 3300005331 Ga0070670_100147274 Ga0070670_1001472742 370
238 3300005335 Ga0070666_10088831 Ga0070666_100888312 370
239 3300005354 Ga0070675_100056649 Ga0070675_1000566493 370
240 3300005356 Ga0070674_100061070 Ga0070674_1000610703 370
241 3300005364 Ga0070673_100011653 Ga0070673_1000116531 370
242 3300005518 Ga0070699_100058889 Ga0070699_1000588892 370
243 3300005577 Ga0068857_100125709 Ga0068857_1001257092 370
244 3300005719 Ga0068861_100228969 Ga0068861_1002289692 370
245 3300005985 Ga0081539_10000065 Ga0081539_1000006553 370
246 3300006844 Ga0075428_100410226 Ga0075428_1004102261 370
247 3300006846 Ga0075430_100017137 Ga0075430_1000171373 370
248 3300006847 Ga0075431_100011670 Ga0075431_1000116705 370
249 3300009094 Ga0111539_10009292 Ga0111539_100092926 370
250 3300009094 Ga0111539_10357207 Ga0111539_103572072 370
251 3300009147 Ga0114129_10081920 Ga0114129_100819202 370
252 3300013308 Ga0157375_10432945 Ga0157375_104329452 370
253 3300014745 Ga0157377_10017366 Ga0157377_100173663 370
254 3300017792 Ga0163161_10010397 Ga0163161_100103973 370
255 3300025893 Ga0207682_10010708 Ga0207682_100107082 370
256 3300025925 Ga0207650_10020052 Ga0207650_100200522 370
257 3300025926 Ga0207659_10003836 Ga0207659_100038362 370
258 3300025926 Ga0207659_10201084 Ga0207659_102010842 370
259 3300025940 Ga0207691_10013218 Ga0207691_100132185 370
260 3300025942 Ga0207689_10143973 Ga0207689_101439732 370
261 3300026089 Ga0207648_10127625 Ga0207648_101276252 370
262 3300026116 Ga0207674_10111333 Ga0207674_101113332 370
263 3300026118 Ga0207675_100221599 Ga0207675_1002215992 370
264 3300046537 Ga0495598_0031975 Ga0495598_0031975_212_1384 370
265 3300049522 Ga0501299_009234 Ga0501299_009234_379_1593 370
266 3300050508 nmdc:mga09592_260421_c1 nmdc:mga09592_260421_c1_146_1318 370
267 3300050509 nmdc:mga0qj67_4546_c1 nmdc:mga0qj67_4546_c1_3917_5089 370
268 3300050511 nmdc:mga08y16_6468_c1 nmdc:mga08y16_6468_c1_188_1339 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01263

Aldose_epim

Aldose 1-epimerase

73

399

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1so0-assembly4.cif.gz_D crystal structure of human galactose mutarotase complexed with galactose 0.9551 22 369
1so0-assembly4.cif.gz_D crystal structure of human galactose mutarotase complexed with galactose 0.9523 22 369
4rnl-assembly1.cif.gz_A the crystal structure of a possible galactose mutarotase from streptomyces platensis subsp. rosaceus 0.9457 23 369
4rnl-assembly1.cif.gz_A the crystal structure of a possible galactose mutarotase from streptomyces platensis subsp. rosaceus 0.9349 23 369
1nsz-assembly1.cif.gz_A crystal structure of galactose mutarotase from lactococcus lactis mutant h170n complexed with glucose 0.9339 24 369
ID Description Score Start End Superfamily
af_Q9VP02_15_358_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9544 38 368 2.70.98.10
af_Q8MR63_14_363_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9506 38 369 2.70.98.10
af_Q33AZ5_28_362_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9504 40 368 2.70.98.10
af_I1KJ59_42_349_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9469 69 367 2.70.98.10
4rnlC00 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9457 21 369 2.70.98.10
ID Description Score Start End GO Terms
AF-A0A2W4KTB6-F1-model_v4 Galactose-1-epimerase 0.9897 131 369 GO:0004034
GO:0006006
GO:0030246
GO:0033499
AF-M7N7B5-F1-model_v4 Aldose 1-epimerase (EC 5.1.3.3) 0.9821 24 194 GO:0004034
GO:0005737
GO:0006006
GO:0030246
GO:0033499
AF-A0A524KZR5-F1-model_v4 Aldose 1-epimerase (Galactose mutarotase) (Type-1 mutarotase) 0.9812 24 229 GO:0004034
GO:0006006
GO:0030246
GO:0033499
AF-A0A0F0H3W7-F1-model_v4 Aldose 1-epimerase (Galactose mutarotase) (Type-1 mutarotase) 0.9804 24 239 GO:0004034
GO:0005737
GO:0006006
GO:0030246
GO:0033499
AF-A0A7Y3EYD4-F1-model_v4 Galactose mutarotase 0.9804 24 216 GO:0004034
GO:0006006
GO:0030246
GO:0033499

Feature Viewer

pLDDT pTM Quality
92.32 0.89 High
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Predicted Structure (AlphaFold2)

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