F375418

General Info

Members Datasets Scaffolds Average Seq Length
268 175 536 142

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10006734|Ga0075433_100067346
Length 162
Sequence LLSQPVATRWTTPRFASFAVPTSAERPEEVLLDTSVAVALAVADHEGHATTLEAVRGLRPGLAGHAWFETFSVLTRLPPPVRRAPADVVRLLLHDFPASRFLDERSAERLGKELPQLDIAGGAVYDALVGAAARQHEARLLTRDRRALGVYRALKVDATLIA

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
55 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
79 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
90 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
91 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
92 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
93 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
94 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
95 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
96 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
97 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
98 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
99 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
100 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
101 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
114 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.76
Metatranscriptomes 2.24
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.12
Nodule 0
Rhizoplane 11.57
Rhizosphere 80.97
Stem 0
Stem Tuber 0
Unclassified 22.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10006734 3300006852 Bacteria 9103
2 JGI25406J46586_10039097 3300003203 Bacteria 1694
3 JGI25406J46586_10056100 3300003203 Bacteria 1294
4 Ga0070658_10089840 3300005327 Bacteria 2530
5 Ga0070690_100576380 3300005330 Bacteria 851
6 Ga0070670_100349778 3300005331 Bacteria 1298
7 Ga0070680_100576980 3300005336 Unclassified 965
8 Ga0070682_100043621 3300005337 Bacteria 2774
9 Ga0070682_100237118 3300005337 Bacteria 1308
10 Ga0070660_100874136 3300005339 Unclassified 757
11 Ga0070661_100160106 3300005344 Bacteria 1704
12 Ga0070673_101379735 3300005364 Unclassified 663
13 Ga0070710_10472856 3300005437 Bacteria 853
14 Ga0070711_100778443 3300005439 Bacteria 810
15 Ga0070711_101166476 3300005439 Bacteria 665
16 Ga0070708_100259104 3300005445 Bacteria 1635
17 Ga0070708_100686742 3300005445 Bacteria 964
18 Ga0070663_100338878 3300005455 Bacteria 1214
19 Ga0070678_100034490 3300005456 Bacteria 3525
20 Ga0070681_10042568 3300005458 Bacteria 4550
21 Ga0070706_100069369 3300005467 Bacteria 3260
22 Ga0070706_100256083 3300005467 Bacteria 1634
23 Ga0070706_101476980 3300005467 Unclassified 621
24 Ga0070707_100019782 3300005468 Bacteria 6346
25 Ga0070707_100732559 3300005468 Bacteria 952
26 Ga0070698_100002141 3300005471 Bacteria 21908
27 Ga0070698_100121288 3300005471 Bacteria 2574
28 Ga0070679_100016483 3300005530 Bacteria 7130
29 Ga0070684_100028038 3300005535 Bacteria 4760
30 Ga0068853_100275217 3300005539 Bacteria 1551
31 Ga0070693_100972272 3300005547 Unclassified 641
32 Ga0070704_100357531 3300005549 Bacteria 1235
33 Ga0068857_100085430 3300005577 Bacteria 2820
34 Ga0068854_100646778 3300005578 Bacteria 907
35 Ga0068856_100047883 3300005614 Bacteria 4212
36 Ga0068852_100417301 3300005616 Bacteria 1323
37 Ga0081455_10058718 3300005937 Bacteria 3253
38 Ga0081455_10630114 3300005937 Bacteria 694
39 Ga0081455_10804523 3300005937 Bacteria 590
40 Ga0081538_10035384 3300005981 Bacteria 3282
41 Ga0081538_10207702 3300005981 Bacteria 794
42 Ga0081539_10021002 3300005985 Bacteria 4383
43 Ga0081539_10041688 3300005985 Bacteria 2681
44 Ga0070717_10148759 3300006028 Bacteria 2025
45 Ga0070717_10703252 3300006028 Bacteria 918
46 Ga0075365_10602436 3300006038 Archaea 777
47 Ga0075364_10206405 3300006051 Bacteria 1332
48 Ga0070712_100241150 3300006175 Bacteria 1440
49 Ga0070712_101058378 3300006175 Bacteria 703
50 Ga0075428_100901535 3300006844 Unclassified 938
51 Ga0075434_100124384 3300006871 Unclassified 2596
52 Ga0068865_101876319 3300006881 Bacteria 542
53 Ga0075435_100232168 3300007076 Unclassified 1568
54 Ga0111539_10766293 3300009094 Bacteria 1123
55 Ga0105245_10127549 3300009098 Bacteria 2383
56 Ga0105245_11389556 3300009098 Unclassified 752
57 Ga0105245_11417467 3300009098 Unclassified 745
58 Ga0114129_10679488 3300009147 Bacteria 1326
59 Ga0114129_10836772 3300009147 Bacteria 1171
60 Ga0105241_10061078 3300009174 Bacteria 2901
61 Ga0105242_11846694 3300009176 Unclassified 644
62 Ga0105237_10223416 3300009545 Bacteria 1883
63 Ga0105237_10464900 3300009545 Bacteria 1271
64 Ga0105238_11138568 3300009551 Unclassified 804
65 Ga0099796_10203455 3300010159 Bacteria 804
66 Ga0105239_10975607 3300010375 Unclassified 974
67 Ga0105246_10965983 3300011119 Bacteria 769
68 Ga0105246_12433416 3300011119 Unclassified 514
69 Ga0157369_10226164 3300013105 Bacteria 1957
70 Ga0157369_10419801 3300013105 Bacteria 1387
71 Ga0157372_10046393 3300013307 Bacteria 4823
72 Ga0157377_10036124 3300014745 Bacteria 2716
73 Ga0197907_10676107 3300020069 Bacteria 1357
74 Ga0206355_1368364 3300020076 Bacteria 2292
75 Ga0206350_10255095 3300020080 Bacteria 875
76 Ga0206353_11961513 3300020082 Bacteria 1321
77 Ga0213874_10065848 3300021377 Unclassified 1146
78 Ga0213875_10498842 3300021388 Bacteria 585
79 Ga0224572_1016484 3300024225 Bacteria 1417
80 Ga0207688_10503866 3300025901 Bacteria 758
81 Ga0207684_10115121 3300025910 Bacteria 2303
82 Ga0207707_10391276 3300025912 Bacteria 1194
83 Ga0207663_10586671 3300025916 Bacteria 875
84 Ga0207663_10695122 3300025916 Bacteria 805
85 Ga0207660_11070527 3300025917 Unclassified 657
86 Ga0207657_10977878 3300025919 Unclassified 650
87 Ga0207649_10039782 3300025920 Bacteria 2853
88 Ga0207646_10197777 3300025922 Bacteria 1815
89 Ga0207659_11495382 3300025926 Unclassified 578
90 Ga0207687_10221580 3300025927 Bacteria 1490
91 Ga0207687_10714185 3300025927 Unclassified 851
92 Ga0207664_10352893 3300025929 Bacteria 1302
93 Ga0207661_10003469 3300025944 Bacteria 10954
94 Ga0207677_11194515 3300026023 Unclassified 696
95 Ga0207639_12193844 3300026041 Unclassified 514
96 Ga0207678_10129445 3300026067 Bacteria 2153
97 Ga0207676_11332726 3300026095 Unclassified 713
98 Ga0207674_10275747 3300026116 Bacteria 1629
99 Ga0207683_10121793 3300026121 Bacteria 2342
100 Ga0207683_11243094 3300026121 Unclassified 690
101 Ga0265319_1086926 3300028563 Bacteria 989
102 Ga0265760_10083090 3300031090 Bacteria 994
103 Ga0265760_10265097 3300031090 Bacteria 599
104 Ga0265320_10187785 3300031240 Bacteria 925
105 Ga0307408_100191599 3300031548 Bacteria 1648
106 Ga0307407_10081776 3300031903 Bacteria 1956
107 Ga0307409_100472301 3300031995 Bacteria 1215
108 Ga0307409_101579701 3300031995 Bacteria 684
109 Ga0307415_100012312 3300032126 Bacteria 4941
110 Ga0307415_100799330 3300032126 Bacteria 861
111 Ga0373956_0428091 3300035119 Bacteria 632
112 Ga0436364_0312754 3300037853 Unclassified 786
113 Ga0436364_0397780 3300037853 Bacteria 617
114 Ga0436364_0580444 3300037853 Unclassified 732
115 Ga0436364_1402445 3300037853 Bacteria 838
116 Ga0436365_0939890 3300039437 Bacteria 1247
117 Ga0436365_1827651 3300039437 Bacteria 633
118 Ga0436363_0248760 3300039450 Bacteria 1993
119 Ga0436363_0432462 3300039450 Unclassified 1175
120 Ga0436362_0151923 3300039453 Unclassified 626
121 Ga0451789_0442350 3300041443 Bacteria 2627
122 Ga0451791_0512695 3300041451 Bacteria 2148
123 Ga0451793_0062069 3300041452 Bacteria 15417
124 Ga0451797_0563627 3300041453 Bacteria 4524
125 Ga0451795_0910217 3300041456 Bacteria 2557
126 Ga0451802_1711023 3300041460 Bacteria 1745
127 Ga0451837_0868210 3300041494 Bacteria 2608
128 Ga0451837_1194782 3300041494 Unclassified 1242
129 Ga0451839_0230882 3300041496 Unclassified 770
130 Ga0451841_0963483 3300041498 Bacteria 3183
131 Ga0451849_0136098 3300041505 Bacteria 1695
132 Ga0451853_0684498 3300041512 Bacteria 5864
133 Ga0451853_2940190 3300041512 Bacteria 617
134 Ga0439446_0053758 3300042156 Bacteria 1207
135 Ga0451577_0005201 3300042876 Bacteria 13390
136 Ga0466966_0027225 3300044684 Bacteria 3728
137 Ga0466961_0541728 3300044693 Bacteria 701
138 Ga0466961_0550176 3300044693 Bacteria 695
139 Ga0466971_0109528 3300044719 Bacteria 1273
140 Ga0466968_0141346 3300044735 Bacteria 1101
141 Ga0466957_0148812 3300044842 Bacteria 1513
142 Ga0466960_0732969 3300044901 Bacteria 595
143 Ga0466959_0116094 3300045049 Bacteria 1906
144 Ga0466959_0252378 3300045049 Bacteria 1216
145 Ga0466959_0298296 3300045049 Bacteria 1104
146 Ga0495603_0228647 3300046455 Bacteria 1073
147 Ga0495629_0659168 3300046459 Unclassified 697
148 Ga0495582_0352286 3300046473 Unclassified 848
149 Ga0495608_0594866 3300046511 Unclassified 664
150 Ga0495586_0209448 3300046535 Bacteria 1106
151 Ga0495587_0417643 3300046536 Bacteria 745
152 Ga0495667_0166263 3300046559 Bacteria 1418
153 Ga0495647_0364673 3300046681 Unclassified 659
154 Ga0495581_0885721 3300047315 Unclassified 510
155 Ga0495604_0311611 3300047317 Bacteria 1054
156 Ga0495674_0043366 3300047319 Bacteria 4004
157 Ga0495674_0309174 3300047319 Bacteria 1290
158 Ga0495680_0934503 3300047322 Bacteria 558
159 Ga0495602_0535525 3300048088 Unclassified 814
160 Ga0495602_0693234 3300048088 Bacteria 692
161 Ga0495602_0755216 3300048088 Bacteria 656
162 Ga0496101_0868400 3300048904 Unclassified 711
163 Ga0496102_0097186 3300048905 Bacteria 2731
164 Ga0496102_0307027 3300048905 Bacteria 1495
165 Ga0496103_0064639 3300048906 Bacteria 2281
166 Ga0496103_0236313 3300048906 Bacteria 1176
167 Ga0496104_0002478 3300048907 Bacteria 15907
168 Ga0496104_1233678 3300048907 Bacteria 651
169 Ga0496105_0359581 3300048908 Unclassified 1161
170 Ga0496106_0621896 3300048909 Unclassified 864
171 Ga0496108_0013151 3300048911 Bacteria 6744
172 Ga0496108_0018774 3300048911 Bacteria 5667
173 Ga0496109_0006721 3300048912 Bacteria 9681
174 Ga0496109_0151017 3300048912 Unclassified 2175
175 Ga0496109_0468466 3300048912 Unclassified 1190
176 Ga0496109_0952342 3300048912 Unclassified 796
177 Ga0496110_0001647 3300048913 Bacteria 16387
178 Ga0496110_0014820 3300048913 Bacteria 6477
179 Ga0496110_1240161 3300048913 Bacteria 655
180 Ga0496110_1463853 3300048913 Bacteria 593
181 Ga0496111_0010296 3300048914 Bacteria 6266
182 Ga0496111_0032952 3300048914 Bacteria 3694
183 Ga0496113_0026336 3300048916 Bacteria 4157
184 Ga0496114_0037286 3300048917 Bacteria 4020
185 Ga0496114_0630866 3300048917 Unclassified 944
186 Ga0496115_0178711 3300048918 Bacteria 1755
187 Ga0501032_0014989 3300049569 Bacteria 5481
188 Ga0501033_1182255 3300049570 Bacteria 507
189 Ga0501034_0014141 3300049571 Bacteria 8225
190 Ga0501036_0099461 3300049572 Bacteria 2460
191 Ga0501036_0171284 3300049572 Unclassified 1829
192 Ga0501036_0180165 3300049572 Bacteria 1779
193 Ga0501036_0317928 3300049572 Bacteria 1301
194 Ga0501037_0001260 3300049573 Bacteria 18646
195 Ga0501038_0030454 3300049574 Bacteria 4776
196 Ga0501038_0248969 3300049574 Bacteria 1408
197 Ga0501038_0794032 3300049574 Bacteria 704
198 Ga0501039_0060690 3300049575 Bacteria 2928
199 Ga0501039_0551573 3300049575 Bacteria 904
200 Ga0501039_0762768 3300049575 Bacteria 755
201 Ga0501039_0823342 3300049575 Bacteria 724
202 Ga0501040_0193787 3300049576 Bacteria 1443
203 Ga0501040_0478190 3300049576 Bacteria 897
204 Ga0501040_0856408 3300049576 Unclassified 658
205 Ga0501041_0045766 3300049577 Bacteria 2661
206 Ga0501041_0386030 3300049577 Bacteria 886
207 Ga0501042_0053019 3300049578 Bacteria 2894
208 Ga0501042_0782300 3300049578 Bacteria 694
209 Ga0501042_1048209 3300049578 Unclassified 594
210 Ga0501042_1400617 3300049578 Unclassified 510
211 Ga0501043_0038439 3300049579 Bacteria 3763
212 Ga0501046_0301977 3300049580 Unclassified 1169
213 Ga0501046_0369209 3300049580 Unclassified 1040
214 Ga0501046_0645523 3300049580 Bacteria 748
215 Ga0501047_0031929 3300049581 Bacteria 5082
216 Ga0501047_0650738 3300049581 Unclassified 873
217 Ga0501048_0445291 3300049582 Bacteria 927
218 Ga0501068_0928689 3300049584 Unclassified 573
219 Ga0501069_0660234 3300049585 Bacteria 629
220 Ga0501070_0012734 3300049586 Bacteria 7091
221 Ga0501070_0421508 3300049586 Bacteria 1078
222 Ga0501071_1369040 3300049587 Bacteria 546
223 Ga0501072_0050447 3300049588 Bacteria 3277
224 Ga0501072_0064283 3300049588 Bacteria 2894
225 Ga0501072_0312421 3300049588 Bacteria 1249
226 Ga0501073_0635538 3300049589 Bacteria 737
227 Ga0501074_0025373 3300049590 Bacteria 4304
228 Ga0501074_0194122 3300049590 Bacteria 1447
229 Ga0501074_0776446 3300049590 Bacteria 675
230 Ga0501075_0025837 3300049591 Bacteria 4316
231 Ga0501075_0424760 3300049591 Bacteria 1013
232 Ga0501075_1208063 3300049591 Unclassified 573
233 Ga0501076_0022916 3300049592 Bacteria 4805
234 Ga0501076_0096610 3300049592 Bacteria 2380
235 Ga0501076_0211356 3300049592 Bacteria 1585
236 Ga0501076_0268880 3300049592 Bacteria 1396
237 Ga0501076_0791968 3300049592 Unclassified 782
238 Ga0501077_0018117 3300049593 Bacteria 4452
239 Ga0501077_0213134 3300049593 Bacteria 1227
240 Ga0501077_0642116 3300049593 Bacteria 682
241 Ga0501079_0186960 3300049741 Archaea 1617
242 Ga0501079_0358586 3300049741 Bacteria 1143
243 Ga0501079_1073209 3300049741 Bacteria 634
244 Ga0501080_0003511 3300049742 Bacteria 13806
245 Ga0501080_0060659 3300049742 Bacteria 3521
246 Ga0501080_0271456 3300049742 Bacteria 1543
247 Ga0501080_0504292 3300049742 Bacteria 1081
248 Ga0501080_0805798 3300049742 Bacteria 823
249 Ga0501081_0260394 3300049743 Bacteria 1267
250 Ga0501035_0213655 3300049822 Bacteria 1650
251 Ga0501035_0328761 3300049822 Unclassified 1283
252 Ga0501044_0001545 3300049823 Bacteria 26991
253 Ga0501044_0250856 3300049823 Bacteria 1711
254 Ga0501045_0043012 3300049824 Bacteria 3289
255 Ga0501045_0082706 3300049824 Bacteria 2368
256 Ga0501045_0148895 3300049824 Bacteria 1741
257 Ga0501045_0455894 3300049824 Unclassified 950
258 nmdc:mga00v17_9389_c1 3300050491 Bacteria 5291
259 nmdc:mga06r32_1358942_c1 3300050510 Unclassified 653
260 nmdc:mga0n895_64053_c1 3300050512 Unclassified 3636
261 nmdc:mga08x19_18956_c1 3300050514 Bacteria 4218
262 nmdc:mga0a205_13677_c1 3300050515 Bacteria 7562
263 Ga0495595_0190938 3300053084 Bacteria 1018
264 Ga0501084_0601416 3300054114 Unclassified 929
265 Ga0501082_0299109 3300060353 Unclassified 1401
266 Ga0466962_0047422 3300061719 Bacteria 2053
267 Ga0530510_0021470 3300061734 Bacteria 4594
268 Ga0530510_0468421 3300061734 Unclassified 953
269 Ga0075433_10006734
270 JGI25406J46586_10039097
271 JGI25406J46586_10056100
272 Ga0070658_10089840
273 Ga0070690_100576380
274 Ga0070670_100349778
275 Ga0070680_100576980
276 Ga0070682_100043621
277 Ga0070682_100237118
278 Ga0070660_100874136
279 Ga0070661_100160106
280 Ga0070673_101379735
281 Ga0070710_10472856
282 Ga0070711_100778443
283 Ga0070711_101166476
284 Ga0070708_100259104
285 Ga0070708_100686742
286 Ga0070663_100338878
287 Ga0070678_100034490
288 Ga0070681_10042568
289 Ga0070706_100069369
290 Ga0070706_100256083
291 Ga0070706_101476980
292 Ga0070707_100019782
293 Ga0070707_100732559
294 Ga0070698_100002141
295 Ga0070698_100121288
296 Ga0070679_100016483
297 Ga0070684_100028038
298 Ga0068853_100275217
299 Ga0070693_100972272
300 Ga0070704_100357531
301 Ga0068857_100085430
302 Ga0068854_100646778
303 Ga0068856_100047883
304 Ga0068852_100417301
305 Ga0081455_10058718
306 Ga0081455_10630114
307 Ga0081455_10804523
308 Ga0081538_10035384
309 Ga0081538_10207702
310 Ga0081539_10021002
311 Ga0081539_10041688
312 Ga0070717_10148759
313 Ga0070717_10703252
314 Ga0075365_10602436
315 Ga0075364_10206405
316 Ga0070712_100241150
317 Ga0070712_101058378
318 Ga0075428_100901535
319 Ga0075434_100124384
320 Ga0068865_101876319
321 Ga0075435_100232168
322 Ga0111539_10766293
323 Ga0105245_10127549
324 Ga0105245_11389556
325 Ga0105245_11417467
326 Ga0114129_10679488
327 Ga0114129_10836772
328 Ga0105241_10061078
329 Ga0105242_11846694
330 Ga0105237_10223416
331 Ga0105237_10464900
332 Ga0105238_11138568
333 Ga0099796_10203455
334 Ga0105239_10975607
335 Ga0105246_10965983
336 Ga0105246_12433416
337 Ga0157369_10226164
338 Ga0157369_10419801
339 Ga0157372_10046393
340 Ga0157377_10036124
341 Ga0197907_10676107
342 Ga0206355_1368364
343 Ga0206350_10255095
344 Ga0206353_11961513
345 Ga0213874_10065848
346 Ga0213875_10498842
347 Ga0224572_1016484
348 Ga0207688_10503866
349 Ga0207684_10115121
350 Ga0207707_10391276
351 Ga0207663_10586671
352 Ga0207663_10695122
353 Ga0207660_11070527
354 Ga0207657_10977878
355 Ga0207649_10039782
356 Ga0207646_10197777
357 Ga0207659_11495382
358 Ga0207687_10221580
359 Ga0207687_10714185
360 Ga0207664_10352893
361 Ga0207661_10003469
362 Ga0207677_11194515
363 Ga0207639_12193844
364 Ga0207678_10129445
365 Ga0207676_11332726
366 Ga0207674_10275747
367 Ga0207683_10121793
368 Ga0207683_11243094
369 Ga0265319_1086926
370 Ga0265760_10083090
371 Ga0265760_10265097
372 Ga0265320_10187785
373 Ga0307408_100191599
374 Ga0307407_10081776
375 Ga0307409_100472301
376 Ga0307409_101579701
377 Ga0307415_100012312
378 Ga0307415_100799330
379 Ga0373956_0428091
380 Ga0436364_0312754
381 Ga0436364_0397780
382 Ga0436364_0580444
383 Ga0436364_1402445
384 Ga0436365_0939890
385 Ga0436365_1827651
386 Ga0436363_0248760
387 Ga0436363_0432462
388 Ga0436362_0151923
389 Ga0451789_0442350
390 Ga0451791_0512695
391 Ga0451793_0062069
392 Ga0451797_0563627
393 Ga0451795_0910217
394 Ga0451802_1711023
395 Ga0451837_0868210
396 Ga0451837_1194782
397 Ga0451839_0230882
398 Ga0451841_0963483
399 Ga0451849_0136098
400 Ga0451853_0684498
401 Ga0451853_2940190
402 Ga0439446_0053758
403 Ga0451577_0005201
404 Ga0466966_0027225
405 Ga0466961_0541728
406 Ga0466961_0550176
407 Ga0466971_0109528
408 Ga0466968_0141346
409 Ga0466957_0148812
410 Ga0466960_0732969
411 Ga0466959_0116094
412 Ga0466959_0252378
413 Ga0466959_0298296
414 Ga0495603_0228647
415 Ga0495629_0659168
416 Ga0495582_0352286
417 Ga0495608_0594866
418 Ga0495586_0209448
419 Ga0495587_0417643
420 Ga0495667_0166263
421 Ga0495647_0364673
422 Ga0495581_0885721
423 Ga0495604_0311611
424 Ga0495674_0043366
425 Ga0495674_0309174
426 Ga0495680_0934503
427 Ga0495602_0535525
428 Ga0495602_0693234
429 Ga0495602_0755216
430 Ga0496101_0868400
431 Ga0496102_0097186
432 Ga0496102_0307027
433 Ga0496103_0064639
434 Ga0496103_0236313
435 Ga0496104_0002478
436 Ga0496104_1233678
437 Ga0496105_0359581
438 Ga0496106_0621896
439 Ga0496108_0013151
440 Ga0496108_0018774
441 Ga0496109_0006721
442 Ga0496109_0151017
443 Ga0496109_0468466
444 Ga0496109_0952342
445 Ga0496110_0001647
446 Ga0496110_0014820
447 Ga0496110_1240161
448 Ga0496110_1463853
449 Ga0496111_0010296
450 Ga0496111_0032952
451 Ga0496113_0026336
452 Ga0496114_0037286
453 Ga0496114_0630866
454 Ga0496115_0178711
455 Ga0501032_0014989
456 Ga0501033_1182255
457 Ga0501034_0014141
458 Ga0501036_0099461
459 Ga0501036_0171284
460 Ga0501036_0180165
461 Ga0501036_0317928
462 Ga0501037_0001260
463 Ga0501038_0030454
464 Ga0501038_0248969
465 Ga0501038_0794032
466 Ga0501039_0060690
467 Ga0501039_0551573
468 Ga0501039_0762768
469 Ga0501039_0823342
470 Ga0501040_0193787
471 Ga0501040_0478190
472 Ga0501040_0856408
473 Ga0501041_0045766
474 Ga0501041_0386030
475 Ga0501042_0053019
476 Ga0501042_0782300
477 Ga0501042_1048209
478 Ga0501042_1400617
479 Ga0501043_0038439
480 Ga0501046_0301977
481 Ga0501046_0369209
482 Ga0501046_0645523
483 Ga0501047_0031929
484 Ga0501047_0650738
485 Ga0501048_0445291
486 Ga0501068_0928689
487 Ga0501069_0660234
488 Ga0501070_0012734
489 Ga0501070_0421508
490 Ga0501071_1369040
491 Ga0501072_0050447
492 Ga0501072_0064283
493 Ga0501072_0312421
494 Ga0501073_0635538
495 Ga0501074_0025373
496 Ga0501074_0194122
497 Ga0501074_0776446
498 Ga0501075_0025837
499 Ga0501075_0424760
500 Ga0501075_1208063
501 Ga0501076_0022916
502 Ga0501076_0096610
503 Ga0501076_0211356
504 Ga0501076_0268880
505 Ga0501076_0791968
506 Ga0501077_0018117
507 Ga0501077_0213134
508 Ga0501077_0642116
509 Ga0501079_0186960
510 Ga0501079_0358586
511 Ga0501079_1073209
512 Ga0501080_0003511
513 Ga0501080_0060659
514 Ga0501080_0271456
515 Ga0501080_0504292
516 Ga0501080_0805798
517 Ga0501081_0260394
518 Ga0501035_0213655
519 Ga0501035_0328761
520 Ga0501044_0001545
521 Ga0501044_0250856
522 Ga0501045_0043012
523 Ga0501045_0082706
524 Ga0501045_0148895
525 Ga0501045_0455894
526 nmdc:mga00v17_9389_c1
527 nmdc:mga06r32_1358942_c1
528 nmdc:mga0n895_64053_c1
529 nmdc:mga08x19_18956_c1
530 nmdc:mga0a205_13677_c1
531 Ga0495595_0190938
532 Ga0501084_0601416
533 Ga0501082_0299109
534 Ga0466962_0047422
535 Ga0530510_0021470
536 Ga0530510_0468421

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

30

153

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pol-assembly1.cif.gz_A 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate cytidylyltransferase (kdsb) from acinetobacter baumannii. 0.7762 115 139
5x3t-assembly1.cif.gz_H vapbc from mycobacterium tuberculosis 0.7684 7 123
5h4g-assembly1.cif.gz_B structure of pin-domain protein (vapc4 toxin) from pyrococcus horikoshii determined at 1.77 a resolution 0.7557 2 138
1y82-assembly1.cif.gz_A conserved hypothetical protein pfu-367848-001 from pyrococcus furiosus 0.754 2 138
5h4g-assembly1.cif.gz_A structure of pin-domain protein (vapc4 toxin) from pyrococcus horikoshii determined at 1.77 a resolution 0.7535 2 138
ID Description Score Start End Superfamily
af_P9WF83_5_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9697 8 131 3.40.50.1010
af_P9WF83_5_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9472 8 131 3.40.50.1010
af_P9WF61_2_126_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8994 8 129 3.40.50.1010
af_P9WF61_2_126_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8729 8 129 3.40.50.1010
af_P9WF55_1_133_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.7729 7 126 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A655AP99-F1-model_v4 Conserved protein of uncharacterized function with PIN domain, possible toxin (EC 3.1.-.-) 0.9778 79 139 GO:0016787
AF-A0A2W6EPP8-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9769 7 139 GO:0000287
GO:0004540
GO:0090729
AF-A0A062WS93-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9761 7 139 GO:0000287
GO:0004540
GO:0090729
AF-A0A062VSQ4-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9734 1 138 GO:0000287
GO:0004540
GO:0090729
AF-A0A6I3F5V2-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9715 1 139 GO:0000287
GO:0004540
GO:0090729

Map