F375137

General Info

Members Datasets Scaffolds Average Seq Length
267 209 534 190

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0000589|Ga0500559_0000589_8516_9142
Length 208
Sequence MTENIRPFTVAVFCGSSPGSNPVYLEAAKLVGRRIAERGFGVVYGGGHVGLMGAVADAAMAAGGAVTGVIPHSLQQREDSSGELTELIVVDTMHERKLLMAERSDAFLALPGGPGTLEEITEQWTWAQLGIHEKPVGLLNVNGYYEPFIALVARMGDEGFTHGRYTDMLVFGTDIDAVLDDFENYVPPARLAVSPGAEMNGRGDVVLP

Samples

Sample ID Description Type Environment
1 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
6 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
54 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
55 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
103 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
104 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
107 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
118 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
119 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
153 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
154 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
155 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
156 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
157 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
158 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
159 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
160 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
161 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
162 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
163 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
164 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
165 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
166 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
167 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
168 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
169 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
170 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
171 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
172 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
173 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
174 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
175 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
176 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
177 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
178 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
179 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
180 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
181 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
182 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
183 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
184 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
185 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
186 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
187 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
188 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
189 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
190 2636415599 Klebsiella variicola DX120E Isolate Unclassified
191 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
192 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
193 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
194 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
195 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
196 2775507074 Klebsiella sp. D5A Isolate Unclassified
197 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
198 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
199 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
200 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
201 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
202 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
203 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
204 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
205 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
206 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
207 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
208 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
209 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.9
Metatranscriptomes 0.37
Isolates 21.72

Biome Distribution

Category Percentage (%)
Aerial Root 0.75
Bulb 0
Endosphere 4.12
Nodule 0.75
Rhizoplane 17.23
Rhizosphere 72.28
Stem 0
Stem Tuber 0
Unclassified 3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500559_0000589 3300053136 Bacteria 24757
2 SwRhRL2b_contig_2178057 2162886007 Bacteria 1343
3 JGI25151J46595_10068250 3300003187 Bacteria 1091
4 Ga0006562J51391_1038521 3300003578 Bacteria 930
5 Ga0058692_1000048 3300003856 Bacteria 110906
6 Ga0058692_1025465 3300003856 Bacteria 1175
7 Ga0065703_1000192 3300005272 Bacteria 15606
8 Ga0070676_10015357 3300005328 Unclassified 4223
9 Ga0070683_100001325 3300005329 Bacteria 18851
10 Ga0070683_100014487 3300005329 Bacteria 6899
11 Ga0070683_100142197 3300005329 Bacteria 2273
12 Ga0070670_100815490 3300005331 Bacteria 843
13 Ga0070677_10061889 3300005333 Bacteria 1546
14 Ga0070680_100024302 3300005336 Bacteria 4839
15 Ga0070680_100033975 3300005336 Bacteria 4113
16 Ga0070680_100301886 3300005336 Unclassified 1358
17 Ga0070682_100084321 3300005337 Bacteria 2064
18 Ga0070682_100108559 3300005337 Bacteria 1845
19 Ga0068868_100103173 3300005338 Bacteria 2310
20 Ga0070660_100731438 3300005339 Bacteria 830
21 Ga0070689_100137767 3300005340 Bacteria 1961
22 Ga0070691_10004108 3300005341 Bacteria 6607
23 Ga0070661_100004725 3300005344 Bacteria 9372
24 Ga0070669_100000505 3300005353 Bacteria 29404
25 Ga0070669_100848510 3300005353 Bacteria 778
26 Ga0070673_100579424 3300005364 Unclassified 1022
27 Ga0070659_100486303 3300005366 Bacteria 1051
28 Ga0070709_10201489 3300005434 Bacteria 1410
29 Ga0070714_100003091 3300005435 Bacteria 12353
30 Ga0070713_100004486 3300005436 Bacteria 9385
31 Ga0070700_100249019 3300005441 Unclassified 1273
32 Ga0070662_100350527 3300005457 Bacteria 1209
33 Ga0070681_10001206 3300005458 Bacteria 22475
34 Ga0070681_10139920 3300005458 Bacteria 2350
35 Ga0070685_10525892 3300005466 Bacteria 841
36 Ga0070706_100340540 3300005467 Bacteria 1398
37 Ga0070698_100336546 3300005471 Bacteria 1441
38 Ga0070699_100067949 3300005518 Bacteria 3095
39 Ga0070679_100003858 3300005530 Bacteria 13769
40 Ga0070684_100000163 3300005535 Bacteria 45728
41 Ga0070684_100000361 3300005535 Bacteria 31277
42 Ga0070684_100212647 3300005535 Bacteria 1763
43 Ga0070697_100007983 3300005536 Bacteria 8253
44 Ga0070697_100026420 3300005536 Bacteria 4637
45 Ga0070697_100621004 3300005536 Bacteria 951
46 Ga0068853_101014505 3300005539 Bacteria 799
47 Ga0070695_100007361 3300005545 Bacteria 6526
48 Ga0070695_100023987 3300005545 Bacteria 3755
49 Ga0070695_100085945 3300005545 Bacteria 2089
50 Ga0070696_100003847 3300005546 Bacteria 10026
51 Ga0070696_100084773 3300005546 Bacteria 2248
52 Ga0070665_100008722 3300005548 Bacteria 10260
53 Ga0070704_100006124 3300005549 Bacteria 7064
54 Ga0070704_100056670 3300005549 Bacteria 2783
55 Ga0068855_100367491 3300005563 Bacteria 1582
56 Ga0070664_100072951 3300005564 Bacteria 2944
57 Ga0070664_100130758 3300005564 Bacteria 2205
58 Ga0068857_100002084 3300005577 Bacteria 16240
59 Ga0068857_100002230 3300005577 Bacteria 15786
60 Ga0068856_100006544 3300005614 Bacteria 11421
61 Ga0068859_100019245 3300005617 Bacteria 6859
62 Ga0068859_100204821 3300005617 Bacteria 2058
63 Ga0068862_100046039 3300005844 Bacteria 3723
64 Ga0081538_10094643 3300005981 Bacteria 1529
65 Ga0075364_10254918 3300006051 Bacteria 1192
66 Ga0070716_100103126 3300006173 Bacteria 1753
67 Ga0070712_100757556 3300006175 Bacteria 831
68 Ga0075362_10044924 3300006177 Bacteria 1961
69 Ga0075367_10219900 3300006178 Bacteria 1189
70 Ga0075428_100932019 3300006844 Bacteria 921
71 Ga0097620_100019244 3300006931 Bacteria 6859
72 Ga0097620_100204827 3300006931 Bacteria 2058
73 Ga0099794_10265952 3300007265 Unclassified 885
74 Ga0099795_10000269 3300007788 Bacteria 9294
75 Ga0105250_10036175 3300009092 Bacteria 1982
76 Ga0105247_10002701 3300009101 Bacteria 11912
77 Ga0114129_10000013 3300009147 Bacteria 134059
78 Ga0114129_10140754 3300009147 Bacteria 3307
79 Ga0105243_10001406 3300009148 Bacteria 21287
80 Ga0105243_10775309 3300009148 Bacteria 943
81 Ga0105248_10084436 3300009177 Bacteria 3572
82 Ga0105237_10272639 3300009545 Bacteria 1695
83 Ga0105249_10134106 3300009553 Bacteria 2368
84 Ga0105249_10592980 3300009553 Bacteria 1162
85 Ga0099796_10009923 3300010159 Bacteria 2597
86 Ga0157373_10224240 3300013100 Bacteria 1326
87 Ga0157369_10056313 3300013105 Bacteria 4243
88 Ga0157378_10614080 3300013297 Bacteria 1100
89 Ga0157372_10051079 3300013307 Bacteria 4600
90 Ga0157372_10115589 3300013307 Bacteria 3076
91 Ga0157379_10259899 3300014968 Bacteria 1577
92 Ga0163161_10033548 3300017792 Bacteria 3668
93 Ga0209130_1004430 3300025284 Bacteria 5331
94 Ga0209675_1030710 3300025291 Bacteria 1278
95 Ga0209025_1002061 3300025294 Bacteria 22834
96 Ga0207696_1004958 3300025711 Bacteria 5619
97 Ga0207655_1116172 3300025728 Bacteria 895
98 Ga0207713_1002215 3300025735 Bacteria 14406
99 Ga0207710_10000101 3300025900 Bacteria 110473
100 Ga0207699_10059775 3300025906 Bacteria 2286
101 Ga0207684_10125046 3300025910 Unclassified 2206
102 Ga0207684_10292422 3300025910 Bacteria 1405
103 Ga0207684_10734703 3300025910 Bacteria 837
104 Ga0207707_10012945 3300025912 Bacteria 7262
105 Ga0207707_10038666 3300025912 Bacteria 4169
106 Ga0207695_10038404 3300025913 Bacteria 5155
107 Ga0207671_10184787 3300025914 Bacteria 1623
108 Ga0207660_10036302 3300025917 Bacteria 3426
109 Ga0207662_10521936 3300025918 Bacteria 820
110 Ga0207652_10003141 3300025921 Bacteria 13758
111 Ga0207652_10113732 3300025921 Bacteria 2403
112 Ga0207681_10000574 3300025923 Bacteria 25057
113 Ga0207650_10436735 3300025925 Bacteria 1088
114 Ga0207700_10049466 3300025928 Bacteria 3127
115 Ga0207664_10027731 3300025929 Bacteria 4298
116 Ga0207690_10383220 3300025932 Bacteria 1118
117 Ga0207709_10000016 3300025935 Bacteria 478406
118 Ga0207669_10242436 3300025937 Bacteria 1337
119 Ga0207661_10000572 3300025944 Bacteria 23481
120 Ga0207661_10009183 3300025944 Bacteria 7089
121 Ga0207661_10213287 3300025944 Bacteria 1703
122 Ga0207661_10435656 3300025944 Bacteria 1192
123 Ga0207679_10020024 3300025945 Bacteria 4509
124 Ga0207679_10118039 3300025945 Bacteria 2106
125 Ga0207651_10056847 3300025960 Bacteria 2695
126 Ga0207658_10587393 3300025986 Bacteria 1000
127 Ga0207708_10028247 3300026075 Bacteria 4248
128 Ga0207708_10696411 3300026075 Bacteria 868
129 Ga0207702_10003798 3300026078 Bacteria 13637
130 Ga0207674_10001612 3300026116 Bacteria 29060
131 Ga0207674_10003361 3300026116 Bacteria 19633
132 Ga0207674_10075728 3300026116 Bacteria 3374
133 Ga0207698_10505683 3300026142 Bacteria 1177
134 Ga0209371_1000024 3300027312 Bacteria 477286
135 Ga0209371_1002830 3300027312 Bacteria 9219
136 Ga0209179_1024155 3300027512 Bacteria 1205
137 Ga0268266_10002586 3300028379 Bacteria 19175
138 Ga0265322_10093105 3300028654 Bacteria 857
139 Ga0268256_1000026 3300030500 Bacteria 477260
140 Ga0268256_1000643 3300030500 Bacteria 26645
141 Ga0373944_0028111 3300035089 Bacteria 1672
142 Ga0373954_0148885 3300035118 Bacteria 1143
143 Ga0373943_0062039 3300035170 Bacteria 1870
144 Ga0373946_0032425 3300035171 Bacteria 2098
145 Ga0373927_0003408 3300035695 Bacteria 11426
146 Ga0373925_0001551 3300037068 Bacteria 19545
147 Ga0395898_0748379 3300037466 Bacteria 919
148 Ga0395905_0856702 3300037471 Unclassified 812
149 Ga0451806_063957 3300041462 Bacteria 682
150 Ga0451577_0854727 3300042876 Bacteria 820
151 Ga0453683_0142216 3300044673 Bacteria 1514
152 Ga0453683_0199554 3300044673 Bacteria 1270
153 Ga0453683_0210480 3300044673 Bacteria 1235
154 Ga0453684_0000402 3300044712 Bacteria 178427
155 Ga0453684_0100142 3300044712 Bacteria 3548
156 Ga0453684_0609216 3300044712 Bacteria 1196
157 Ga0453684_0852038 3300044712 Bacteria 979
158 Ga0453684_1449828 3300044712 Bacteria 710
159 Ga0451576_0000192 3300045051 Bacteria 154140
160 Ga0451576_0021580 3300045051 Bacteria 6999
161 Ga0495627_020790 3300046453 Bacteria 2183
162 Ga0495663_0010597 3300046525 Bacteria 2564
163 Ga0496103_0016789 3300048906 Bacteria 4373
164 Ga0496104_0162984 3300048907 Bacteria 2138
165 Ga0496105_0097844 3300048908 Bacteria 2424
166 Ga0496106_0023610 3300048909 Bacteria 4568
167 Ga0496106_0287560 3300048909 Bacteria 1318
168 Ga0496108_0431440 3300048911 Bacteria 1151
169 Ga0496110_0091271 3300048913 Bacteria 2725
170 Ga0496111_0138872 3300048914 Bacteria 1800
171 Ga0496112_0068429 3300048915 Bacteria 3506
172 Ga0496126_0048283 3300048929 Bacteria 3891
173 Ga0501033_0291792 3300049570 Bacteria 1150
174 Ga0501034_0116082 3300049571 Bacteria 2665
175 Ga0501036_0073543 3300049572 Bacteria 2890
176 Ga0501040_0049129 3300049576 Bacteria 2884
177 Ga0501041_0074260 3300049577 Bacteria 2089
178 Ga0501042_0180402 3300049578 Bacteria 1523
179 Ga0501046_0055236 3300049580 Bacteria 3122
180 Ga0501046_0057246 3300049580 Bacteria 3058
181 Ga0501068_0191364 3300049584 Bacteria 1296
182 Ga0501070_0478470 3300049586 Bacteria 1002
183 Ga0501072_0007811 3300049588 Bacteria 8124
184 Ga0501072_0142684 3300049588 Bacteria 1910
185 Ga0501073_0708802 3300049589 Bacteria 694
186 Ga0501075_0018017 3300049591 Bacteria 5105
187 Ga0501075_0020073 3300049591 Bacteria 4854
188 Ga0501075_0221444 3300049591 Bacteria 1443
189 Ga0501076_0071399 3300049592 Bacteria 2777
190 Ga0501076_0298511 3300049592 Bacteria 1320
191 Ga0501076_0386665 3300049592 Bacteria 1150
192 Ga0501079_0095229 3300049741 Bacteria 2307
193 Ga0501081_0016931 3300049743 Bacteria 4818
194 Ga0501035_0115740 3300049822 Bacteria 2347
195 Ga0501045_0331513 3300049824 Bacteria 1132
196 nmdc:mga06z11_246326_c1 3300050494 Unclassified 1051
197 nmdc:mga05p37_47292_c1 3300050507 Bacteria 5291
198 nmdc:mga05p37_90_c1 3300050507 Bacteria 81115
199 nmdc:mga0a205_172273_c1 3300050515 Bacteria 2060
200 Ga0500559_0267117 3300053136 Bacteria 805
201 Ga0500573_0100983 3300053140 Bacteria 1623
202 Ga0501084_0019352 3300054114 Bacteria 5672
203 Ga0501084_0146165 3300054114 Bacteria 1991
204 Ga0501084_1064551 3300054114 Bacteria 679
205 Ga0501082_0013294 3300060353 Bacteria 7080
206 Ga0501082_0485731 3300060353 Bacteria 1079
207 Ga0501082_0604080 3300060353 Bacteria 960
208 Ga0530510_0107034 3300061734 Bacteria 2046
209 Ga0530510_0167721 3300061734 Bacteria 1626
210 2513671933 2513237098 Bacteria 9902361
211 2552747563 2551306352 Bacteria 3873115
212 2563929194 2563366752 Bacteria 4961801
213 2599409060 2599185169 Bacteria 5441380
214 2601522432 2600255254 Bacteria 5281859
215 2601527459 2600255255 Bacteria 5282785
216 2601614289 2600255280 Bacteria 5292309
217 2601619011 2600255281 Bacteria 5288753
218 2601642384 2600255287 Bacteria 5210468
219 2601647232 2600255288 Bacteria 5282738
220 2601652436 2600255289 Bacteria 5281907
221 2601657763 2600255290 Bacteria 5282218
222 2601662206 2600255291 Bacteria 5217298
223 2601695163 2600255298 Bacteria 5215185
224 2601699837 2600255299 Bacteria 5218662
225 2601706282 2600255300 Bacteria 5287774
226 2601710588 2600255301 Bacteria 5280532
227 2601715602 2600255302 Bacteria 5288235
228 2601720189 2600255303 Bacteria 5219315
229 2601726007 2600255304 Bacteria 5283973
230 2601730549 2600255305 Bacteria 5282329
231 2601735565 2600255306 Bacteria 5281613
232 2601740823 2600255307 Bacteria 5439064
233 2601750753 2600255309 Bacteria 5431045
234 2602018007 2600255392 Bacteria 5437392
235 2603659572 2602042052 Bacteria 5215873
236 2603664848 2602042053 Bacteria 5214361
237 2603837939 2602042103 Bacteria 5284714
238 2603843017 2602042104 Bacteria 5281639
239 2603848090 2602042105 Bacteria 5282303
240 2603853161 2602042106 Bacteria 5282744
241 2603866541 2602042109 Bacteria 5152801
242 2603871216 2602042110 Bacteria 5283285
243 2603876131 2602042111 Bacteria 5212080
244 2606048409 2603880178 Bacteria 5283018
245 2606069275 2603880184 Bacteria 5217896
246 2606145085 2603880202 Bacteria 5284684
247 2606175810 2603880211 Bacteria 5284226
248 2637224961 2636415599 Bacteria 5718434
249 2640735828 2639762793 Bacteria 3943681
250 2676406201 2675903046 Bacteria 5451247
251 2678229090 2675903507 Bacteria 3737791
252 2774390366 2773857761 Bacteria 3837365
253 2774437779 2773857770 Bacteria 3911866
254 2777024455 2775507074 Bacteria 5532402
255 2870630000 2870628048 Bacteria 3696012
256 2885387953 2885383462 Bacteria 9473874
257 2904514153 2904513164 Bacteria 5476410
258 2909399759 2909399089 Bacteria 3922598
259 2916700252 2916699645 Bacteria 3568996
260 2919184720 2919182534 Bacteria 3907101
261 2919413471 2919408235 Bacteria 6149349
262 2969081950 2969079654 Bacteria 5439582
263 2984564383 2984559226 Bacteria 5683096
264 2984597116 2984595703 Bacteria 5682994
265 3000379038 3000376612 Bacteria 4705565
266 8055636902 8055632911 Bacteria 5283357
267 8056688010 8056681323 Bacteria 8472857
268 Ga0500559_0000589
269 SwRhRL2b_contig_2178057
270 JGI25151J46595_10068250
271 Ga0006562J51391_1038521
272 Ga0058692_1000048
273 Ga0058692_1025465
274 Ga0065703_1000192
275 Ga0070676_10015357
276 Ga0070683_100001325
277 Ga0070683_100014487
278 Ga0070683_100142197
279 Ga0070670_100815490
280 Ga0070677_10061889
281 Ga0070680_100024302
282 Ga0070680_100033975
283 Ga0070680_100301886
284 Ga0070682_100084321
285 Ga0070682_100108559
286 Ga0068868_100103173
287 Ga0070660_100731438
288 Ga0070689_100137767
289 Ga0070691_10004108
290 Ga0070661_100004725
291 Ga0070669_100000505
292 Ga0070669_100848510
293 Ga0070673_100579424
294 Ga0070659_100486303
295 Ga0070709_10201489
296 Ga0070714_100003091
297 Ga0070713_100004486
298 Ga0070700_100249019
299 Ga0070662_100350527
300 Ga0070681_10001206
301 Ga0070681_10139920
302 Ga0070685_10525892
303 Ga0070706_100340540
304 Ga0070698_100336546
305 Ga0070699_100067949
306 Ga0070679_100003858
307 Ga0070684_100000163
308 Ga0070684_100000361
309 Ga0070684_100212647
310 Ga0070697_100007983
311 Ga0070697_100026420
312 Ga0070697_100621004
313 Ga0068853_101014505
314 Ga0070695_100007361
315 Ga0070695_100023987
316 Ga0070695_100085945
317 Ga0070696_100003847
318 Ga0070696_100084773
319 Ga0070665_100008722
320 Ga0070704_100006124
321 Ga0070704_100056670
322 Ga0068855_100367491
323 Ga0070664_100072951
324 Ga0070664_100130758
325 Ga0068857_100002084
326 Ga0068857_100002230
327 Ga0068856_100006544
328 Ga0068859_100019245
329 Ga0068859_100204821
330 Ga0068862_100046039
331 Ga0081538_10094643
332 Ga0075364_10254918
333 Ga0070716_100103126
334 Ga0070712_100757556
335 Ga0075362_10044924
336 Ga0075367_10219900
337 Ga0075428_100932019
338 Ga0097620_100019244
339 Ga0097620_100204827
340 Ga0099794_10265952
341 Ga0099795_10000269
342 Ga0105250_10036175
343 Ga0105247_10002701
344 Ga0114129_10000013
345 Ga0114129_10140754
346 Ga0105243_10001406
347 Ga0105243_10775309
348 Ga0105248_10084436
349 Ga0105237_10272639
350 Ga0105249_10134106
351 Ga0105249_10592980
352 Ga0099796_10009923
353 Ga0157373_10224240
354 Ga0157369_10056313
355 Ga0157378_10614080
356 Ga0157372_10051079
357 Ga0157372_10115589
358 Ga0157379_10259899
359 Ga0163161_10033548
360 Ga0209130_1004430
361 Ga0209675_1030710
362 Ga0209025_1002061
363 Ga0207696_1004958
364 Ga0207655_1116172
365 Ga0207713_1002215
366 Ga0207710_10000101
367 Ga0207699_10059775
368 Ga0207684_10125046
369 Ga0207684_10292422
370 Ga0207684_10734703
371 Ga0207707_10012945
372 Ga0207707_10038666
373 Ga0207695_10038404
374 Ga0207671_10184787
375 Ga0207660_10036302
376 Ga0207662_10521936
377 Ga0207652_10003141
378 Ga0207652_10113732
379 Ga0207681_10000574
380 Ga0207650_10436735
381 Ga0207700_10049466
382 Ga0207664_10027731
383 Ga0207690_10383220
384 Ga0207709_10000016
385 Ga0207669_10242436
386 Ga0207661_10000572
387 Ga0207661_10009183
388 Ga0207661_10213287
389 Ga0207661_10435656
390 Ga0207679_10020024
391 Ga0207679_10118039
392 Ga0207651_10056847
393 Ga0207658_10587393
394 Ga0207708_10028247
395 Ga0207708_10696411
396 Ga0207702_10003798
397 Ga0207674_10001612
398 Ga0207674_10003361
399 Ga0207674_10075728
400 Ga0207698_10505683
401 Ga0209371_1000024
402 Ga0209371_1002830
403 Ga0209179_1024155
404 Ga0268266_10002586
405 Ga0265322_10093105
406 Ga0268256_1000026
407 Ga0268256_1000643
408 Ga0373944_0028111
409 Ga0373954_0148885
410 Ga0373943_0062039
411 Ga0373946_0032425
412 Ga0373927_0003408
413 Ga0373925_0001551
414 Ga0395898_0748379
415 Ga0395905_0856702
416 Ga0451806_063957
417 Ga0451577_0854727
418 Ga0453683_0142216
419 Ga0453683_0199554
420 Ga0453683_0210480
421 Ga0453684_0000402
422 Ga0453684_0100142
423 Ga0453684_0609216
424 Ga0453684_0852038
425 Ga0453684_1449828
426 Ga0451576_0000192
427 Ga0451576_0021580
428 Ga0495627_020790
429 Ga0495663_0010597
430 Ga0496103_0016789
431 Ga0496104_0162984
432 Ga0496105_0097844
433 Ga0496106_0023610
434 Ga0496106_0287560
435 Ga0496108_0431440
436 Ga0496110_0091271
437 Ga0496111_0138872
438 Ga0496112_0068429
439 Ga0496126_0048283
440 Ga0501033_0291792
441 Ga0501034_0116082
442 Ga0501036_0073543
443 Ga0501040_0049129
444 Ga0501041_0074260
445 Ga0501042_0180402
446 Ga0501046_0055236
447 Ga0501046_0057246
448 Ga0501068_0191364
449 Ga0501070_0478470
450 Ga0501072_0007811
451 Ga0501072_0142684
452 Ga0501073_0708802
453 Ga0501075_0018017
454 Ga0501075_0020073
455 Ga0501075_0221444
456 Ga0501076_0071399
457 Ga0501076_0298511
458 Ga0501076_0386665
459 Ga0501079_0095229
460 Ga0501081_0016931
461 Ga0501035_0115740
462 Ga0501045_0331513
463 nmdc:mga06z11_246326_c1
464 nmdc:mga05p37_47292_c1
465 nmdc:mga05p37_90_c1
466 nmdc:mga0a205_172273_c1
467 Ga0500559_0267117
468 Ga0500573_0100983
469 Ga0501084_0019352
470 Ga0501084_0146165
471 Ga0501084_1064551
472 Ga0501082_0013294
473 Ga0501082_0485731
474 Ga0501082_0604080
475 Ga0530510_0107034
476 Ga0530510_0167721
477 2513671933
478 2552747563
479 2563929194
480 2599409060
481 2601522432
482 2601527459
483 2601614289
484 2601619011
485 2601642384
486 2601647232
487 2601652436
488 2601657763
489 2601662206
490 2601695163
491 2601699837
492 2601706282
493 2601710588
494 2601715602
495 2601720189
496 2601726007
497 2601730549
498 2601735565
499 2601740823
500 2601750753
501 2602018007
502 2603659572
503 2603664848
504 2603837939
505 2603843017
506 2603848090
507 2603853161
508 2603866541
509 2603871216
510 2603876131
511 2606048409
512 2606069275
513 2606145085
514 2606175810
515 2637224961
516 2640735828
517 2676406201
518 2678229090
519 2774390366
520 2774437779
521 2777024455
522 2870630000
523 2885387953
524 2904514153
525 2909399759
526 2916700252
527 2919184720
528 2919413471
529 2969081950
530 2984564383
531 2984597116
532 3000379038
533 8055636902
534 8056688010

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03641

Lysine_decarbox

Possible lysine decarboxylase

52

182

0.98

PF18306

LDcluster4

SLOG cluster4 family

7

154

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5its-assembly2.cif.gz_C crystal structure of log from corynebacterium glutamicum 0.9899 1 180
5zbj-assembly1.cif.gz_A-2 crystal structure of type-i log from pseudomonas aeruginosa pao1 0.9889 2 181
5zbl-assembly2.cif.gz_C crystal structure of type-i log from corynebacterium glutamicum in complex with amp 0.9847 1 182
5zbk-assembly1.cif.gz_A-2 crystal structure of type-i log from pseudomonas aeruginosa pao1 in complex with amp 0.983 2 180
5zbl-assembly2.cif.gz_D crystal structure of type-i log from corynebacterium glutamicum in complex with amp 0.9771 2 182
ID Description Score Start End Superfamily
af_Q2G0B7_1_186_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9833 1 185 3.40.50.450
af_Q2G0B7_1_186_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9729 1 185 3.40.50.450
af_A0A1D6K2U3_1_187_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9655 2 177 3.40.50.450
5zblB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9622 2 186 3.40.50.450
af_A4HXF6_126_320_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.945 1 184 3.40.50.450
ID Description Score Start End GO Terms
AF-A0A4V2PPR8-F1-model_v4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (EC 3.2.2.n1) 0.995 1 186 GO:0005829
GO:0008714
GO:0009691
AF-V2TSF0-F1-model_v4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (EC 3.2.2.n1) 0.993 1 186 GO:0005829
GO:0008714
GO:0009691
AF-A0A150I0T3-F1-model_v4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (EC 3.2.2.n1) 0.9921 1 178 GO:0005829
GO:0008714
GO:0009691
AF-A0A5E7P3T3-F1-model_v4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (EC 3.2.2.n1) 0.9921 2 187 GO:0005829
GO:0008714
GO:0009691
AF-A0A7U8GRU3-F1-model_v4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (EC 3.2.2.n1) 0.9913 1 183 GO:0005829
GO:0009691
GO:0016799

Map