F375036

General Info

Members Datasets Scaffolds Average Seq Length
267 167 267 351

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0000037|Ga0496104_0000037_22006_23304
Length 386
Sequence MAACGHVPDGGIDKVMRVPRRTPLYDQHVAAGAKVVDFAGWEMPVQYPTGVRAEHMAVRECCGVFDVSHMGEIETSGPGAEALLQRLLSNDLAKLPNGGAQYSLLCREDGGVLDDLFTYRLDHDRYLTVANAANHERDLEWFREHASGFDVEVADRAGDYAMLAVQGPLAREIVQAISDTPLPPRMRAEERRLAGTQVLVCGTGYTGEEGVELLLAPERAAALWEELVRRGAVPCGLAARDTLRLEACFHLYGHDLSLERNAIEAGLGWACREETGFIGAEAVRAARERAAAWPRKQPPAVAVEQPPDRLVAFAIDGPGIARQGNPVLGGGVVTSGTMSPCLGVGIGMAYVPAARSGIGERIEIDVRGKIRPATIAAKPLYRKDDS

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
91 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
98 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
99 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
100 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
101 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
107 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.25
Nodule 0
Rhizoplane 6.37
Rhizosphere 88.76
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10011489 3300003203 Bacteria 3883
2 JGI25407J50210_10003345 3300003373 Bacteria 3823
3 Ga0070658_10029535 3300005327 Bacteria 4405
4 Ga0070683_100002002 3300005329 Bacteria 15985
5 Ga0070683_100008243 3300005329 Bacteria 8855
6 Ga0070683_100380269 3300005329 Bacteria 1345
7 Ga0068868_100021426 3300005338 Bacteria 4866
8 Ga0070691_10028236 3300005341 Bacteria 2620
9 Ga0070671_100144106 3300005355 Bacteria 2011
10 Ga0070674_100235147 3300005356 Bacteria 1432
11 Ga0070659_100005882 3300005366 Bacteria 8836
12 Ga0070714_100009658 3300005435 Bacteria 7597
13 Ga0070714_100045390 3300005435 Bacteria 3724
14 Ga0070713_100039265 3300005436 Bacteria 3841
15 Ga0070710_10000005 3300005437 Bacteria 238049
16 Ga0070700_100166691 3300005441 Bacteria 1522
17 Ga0070694_100196062 3300005444 Bacteria 1503
18 Ga0070662_100318625 3300005457 Bacteria 1267
19 Ga0068867_100094504 3300005459 Bacteria 2273
20 Ga0070679_100028676 3300005530 Bacteria 5490
21 Ga0070684_100038772 3300005535 Bacteria 4095
22 Ga0070664_100244807 3300005564 Bacteria 1611
23 Ga0068854_100106876 3300005578 Bacteria 2106
24 Ga0068852_100043659 3300005616 Bacteria 3803
25 Ga0068851_10039853 3300005834 Bacteria 2360
26 Ga0068870_10068796 3300005840 Bacteria 1925
27 Ga0068862_100319037 3300005844 Bacteria 1434
28 Ga0081455_10018249 3300005937 Bacteria 6692
29 Ga0081455_10082841 3300005937 Bacteria 2623
30 Ga0081455_10108607 3300005937 Bacteria 2209
31 Ga0081455_10112970 3300005937 Bacteria 2155
32 Ga0081538_10000035 3300005981 Bacteria 120009
33 Ga0081538_10011502 3300005981 Bacteria 7165
34 Ga0081540_1000554 3300005983 Bacteria 36225
35 Ga0081540_1005020 3300005983 Bacteria 9939
36 Ga0081539_10003820 3300005985 Bacteria 17708
37 Ga0070717_10000004 3300006028 Bacteria 365525
38 Ga0075365_10003891 3300006038 Bacteria 7814
39 Ga0075364_10213927 3300006051 Bacteria 1307
40 Ga0070712_100000002 3300006175 Bacteria 288475
41 Ga0070712_100002700 3300006175 Bacteria 10958
42 Ga0075428_100017157 3300006844 Bacteria 7998
43 Ga0075428_100078167 3300006844 Bacteria 3612
44 Ga0075428_100138236 3300006844 Bacteria 2649
45 Ga0075430_100034598 3300006846 Bacteria 4288
46 Ga0075430_100226234 3300006846 Bacteria 1552
47 Ga0105240_10027193 3300009093 Bacteria 7493
48 Ga0111539_10047467 3300009094 Bacteria 5131
49 Ga0111539_10077902 3300009094 Bacteria 3901
50 Ga0111539_10157664 3300009094 Bacteria 2655
51 Ga0105245_10020903 3300009098 Bacteria 5738
52 Ga0105245_10359663 3300009098 Bacteria 1444
53 Ga0114129_10006344 3300009147 Bacteria 16771
54 Ga0114129_10025786 3300009147 Bacteria 8325
55 Ga0114129_10319468 3300009147 Bacteria 2064
56 Ga0105243_10188275 3300009148 Bacteria 1800
57 Ga0105237_10000495 3300009545 Bacteria 55778
58 Ga0105238_10031972 3300009551 Bacteria 5355
59 Ga0105249_10150516 3300009553 Bacteria 2240
60 Ga0105249_10162146 3300009553 Bacteria 2161
61 Ga0105246_10040396 3300011119 Bacteria 3148
62 Ga0105246_10041031 3300011119 Bacteria 3126
63 Ga0157370_10009956 3300013104 Bacteria 10060
64 Ga0157369_10011528 3300013105 Bacteria 10042
65 Ga0157369_10438405 3300013105 Bacteria 1353
66 Ga0157372_10007815 3300013307 Bacteria 11357
67 Ga0157372_10131846 3300013307 Bacteria 2876
68 Ga0157377_10089578 3300014745 Bacteria 1814
69 Ga0206354_10891260 3300020081 Bacteria 2364
70 Ga0206353_10366517 3300020082 Bacteria 2987
71 Ga0213873_10009156 3300021358 Bacteria 2046
72 Ga0213876_10021695 3300021384 Bacteria 3397
73 Ga0207688_10046036 3300025901 Bacteria 2435
74 Ga0207699_10080488 3300025906 Bacteria 2019
75 Ga0207707_10011203 3300025912 Bacteria 7802
76 Ga0207695_10262808 3300025913 Bacteria 1623
77 Ga0207671_10039798 3300025914 Bacteria 3481
78 Ga0207671_10044859 3300025914 Bacteria 3269
79 Ga0207693_10000014 3300025915 Bacteria 148984
80 Ga0207693_10073711 3300025915 Bacteria 2673
81 Ga0207660_10176373 3300025917 Bacteria 1657
82 Ga0207657_10009802 3300025919 Bacteria 9600
83 Ga0207652_10070792 3300025921 Bacteria 3029
84 Ga0207664_10000922 3300025929 Bacteria 19749
85 Ga0207661_10250279 3300025944 Bacteria 1575
86 Ga0207703_10319707 3300026035 Bacteria 1421
87 Ga0207678_10092888 3300026067 Bacteria 2579
88 Ga0207678_10115268 3300026067 Bacteria 2292
89 Ga0207708_10008968 3300026075 Bacteria 7401
90 Ga0207708_10093395 3300026075 Bacteria 2322
91 Ga0207708_10286724 3300026075 Bacteria 1336
92 Ga0207702_10178485 3300026078 Bacteria 1954
93 Ga0207648_10085237 3300026089 Bacteria 2756
94 Ga0207648_10323688 3300026089 Bacteria 1386
95 Ga0207675_100068996 3300026118 Bacteria 3304
96 Ga0207675_100401474 3300026118 Bacteria 1351
97 Ga0207683_10063390 3300026121 Bacteria 3256
98 Ga0207428_10053265 3300027907 Bacteria 3227
99 Ga0265337_1010487 3300028556 Bacteria 3243
100 Ga0265326_10001340 3300028558 Bacteria 8736
101 Ga0265319_1001236 3300028563 Bacteria 15700
102 Ga0265319_1010432 3300028563 Bacteria 3876
103 Ga0265318_10000650 3300028577 Bacteria 23762
104 Ga0265336_10000002 3300028666 Bacteria 830172
105 Ga0265338_10000001 3300028800 Bacteria 1177449
106 Ga0265324_10003956 3300029957 Bacteria 6858
107 Ga0265340_10000001 3300031247 Bacteria 1647668
108 Ga0265327_10025711 3300031251 Bacteria 3427
109 Ga0307405_10056334 3300031731 Bacteria 2465
110 Ga0307405_10283660 3300031731 Bacteria 1248
111 Ga0307413_10014941 3300031824 Bacteria 3963
112 Ga0307413_10059967 3300031824 Bacteria 2340
113 Ga0307410_10042752 3300031852 Bacteria 2997
114 Ga0307410_10056066 3300031852 Bacteria 2678
115 Ga0307406_10034550 3300031901 Bacteria 3102
116 Ga0307406_10264912 3300031901 Bacteria 1302
117 Ga0307407_10073975 3300031903 Bacteria 2038
118 Ga0307412_10064169 3300031911 Bacteria 2481
119 Ga0307409_100095245 3300031995 Bacteria 2452
120 Ga0307416_100031212 3300032002 Bacteria 4007
121 Ga0307416_100043986 3300032002 Bacteria 3502
122 Ga0307416_100238497 3300032002 Bacteria 1760
123 Ga0307411_10188864 3300032005 Bacteria 1571
124 Ga0307411_10353275 3300032005 Bacteria 1199
125 Ga0307415_100072202 3300032126 Bacteria 2430
126 Ga0307415_100150148 3300032126 Bacteria 1792
127 Ga0373932_0077813 3300035112 Bacteria 1042
128 Ga0373953_0083942 3300035117 Bacteria 1327
129 Ga0395900_0188662 3300037418 Bacteria 2092
130 Ga0395898_0088251 3300037466 Bacteria 2986
131 Ga0395898_0102181 3300037466 Bacteria 2752
132 Ga0395898_0102409 3300037466 Bacteria 2749
133 Ga0395898_0186737 3300037466 Bacteria 1981
134 Ga0395898_0553540 3300037466 Bacteria 1092
135 Ga0436364_0259389 3300037853 Bacteria 16090
136 Ga0395901_0188967 3300038443 Bacteria 2160
137 Ga0395901_0267913 3300038443 Bacteria 1777
138 Ga0395901_0373608 3300038443 Bacteria 1468
139 Ga0436365_0125141 3300039437 Bacteria 6419
140 Ga0436365_0187154 3300039437 Bacteria 2095
141 Ga0436365_0340991 3300039437 Bacteria 3875
142 Ga0436362_0432260 3300039453 Bacteria 3478
143 Ga0451802_1340893 3300041460 Bacteria 2011
144 Ga0439464_0010134 3300042439 Bacteria 2488
145 Ga0466965_0141026 3300044683 Bacteria 1255
146 Ga0466966_0051349 3300044684 Bacteria 2621
147 Ga0466966_0074125 3300044684 Bacteria 2128
148 Ga0466966_0081190 3300044684 Bacteria 2019
149 Ga0466961_0006229 3300044693 Bacteria 7580
150 Ga0466961_0156848 3300044693 Bacteria 1420
151 Ga0466963_0006377 3300044694 Bacteria 6980
152 Ga0466963_0009646 3300044694 Bacteria 5819
153 Ga0466963_0067771 3300044694 Bacteria 2396
154 Ga0466963_0086301 3300044694 Bacteria 2132
155 Ga0466963_0123395 3300044694 Bacteria 1784
156 Ga0466963_0168120 3300044694 Bacteria 1528
157 Ga0466963_0199485 3300044694 Bacteria 1399
158 Ga0466964_0076662 3300044706 Bacteria 1426
159 Ga0466971_0032673 3300044719 Bacteria 2331
160 Ga0466968_0023848 3300044735 Bacteria 2496
161 Ga0466970_0110233 3300044765 Bacteria 1503
162 Ga0466970_0183419 3300044765 Bacteria 1162
163 Ga0466957_0255147 3300044842 Bacteria 1167
164 Ga0466960_0000071 3300044901 Bacteria 33077
165 Ga0466958_0077765 3300045836 Bacteria 2038
166 Ga0466958_0100358 3300045836 Bacteria 1799
167 Ga0466958_0120102 3300045836 Bacteria 1645
168 Ga0466958_0153667 3300045836 Bacteria 1452
169 Ga0466967_0005182 3300045976 Bacteria 8975
170 Ga0466967_0011647 3300045976 Bacteria 6679
171 Ga0466967_0012367 3300045976 Bacteria 6523
172 Ga0466967_0062330 3300045976 Bacteria 3310
173 Ga0466967_0071068 3300045976 Bacteria 3115
174 Ga0466967_0079295 3300045976 Bacteria 2960
175 Ga0466967_0141840 3300045976 Bacteria 2238
176 Ga0466967_0149776 3300045976 Bacteria 2180
177 Ga0466967_0170697 3300045976 Bacteria 2046
178 Ga0466967_0213408 3300045976 Bacteria 1831
179 Ga0466967_0408288 3300045976 Bacteria 1322
180 Ga0466967_0416791 3300045976 Bacteria 1308
181 Ga0495629_0149968 3300046459 Bacteria 1621
182 Ga0495641_0094397 3300046461 Bacteria 1336
183 Ga0495650_0000079 3300046471 Bacteria 244549
184 Ga0495620_0072498 3300046515 Bacteria 1406
185 Ga0495630_0033660 3300046517 Bacteria 3822
186 Ga0495645_0000021 3300046543 Bacteria 137604
187 Ga0495645_0001238 3300046543 Bacteria 17431
188 Ga0495635_0000034 3300046663 Bacteria 96408
189 Ga0495657_0000013 3300046675 Bacteria 195590
190 Ga0495670_0120117 3300046691 Bacteria 1365
191 Ga0495670_0157419 3300046691 Bacteria 1192
192 Ga0495672_0023280 3300047320 Bacteria 4011
193 Ga0495672_0061365 3300047320 Bacteria 2167
194 Ga0495684_0006606 3300047471 Bacteria 8994
195 Ga0495602_0314832 3300048088 Bacteria 1141
196 Ga0496100_0000156 3300048903 Bacteria 38167
197 Ga0496100_0012959 3300048903 Bacteria 4796
198 Ga0496101_0060308 3300048904 Bacteria 2752
199 Ga0496101_0088662 3300048904 Bacteria 2298
200 Ga0496104_0000037 3300048907 Bacteria 178518
201 Ga0496104_0244178 3300048907 Bacteria 1708
202 Ga0496110_0000694 3300048913 Bacteria 23246
203 Ga0496110_0177960 3300048913 Bacteria 1931
204 Ga0496111_0001895 3300048914 Bacteria 12391
205 Ga0496112_0000013 3300048915 Bacteria 237194
206 Ga0496112_0007448 3300048915 Bacteria 9715
207 Ga0496112_0340900 3300048915 Bacteria 1442
208 Ga0496112_0382592 3300048915 Bacteria 1348
209 Ga0496113_0029691 3300048916 Bacteria 3952
210 Ga0496115_0000012 3300048918 Bacteria 215509
211 Ga0496115_0000017 3300048918 Bacteria 185702
212 Ga0496121_0020047 3300048924 Bacteria 6646
213 Ga0496124_0040021 3300048927 Bacteria 4058
214 Ga0501031_0058663 3300049568 Bacteria 2508
215 Ga0501034_0199550 3300049571 Bacteria 1959
216 Ga0501036_0039269 3300049572 Bacteria 4006
217 Ga0501036_0114437 3300049572 Bacteria 2279
218 Ga0501037_0021113 3300049573 Bacteria 4810
219 Ga0501039_0040402 3300049575 Bacteria 3601
220 Ga0501039_0171504 3300049575 Bacteria 1706
221 Ga0501040_0018421 3300049576 Bacteria 4636
222 Ga0501040_0081676 3300049576 Bacteria 2240
223 Ga0501041_0021960 3300049577 Bacteria 3822
224 Ga0501042_0032667 3300049578 Bacteria 3686
225 Ga0501042_0168079 3300049578 Bacteria 1582
226 Ga0501042_0256244 3300049578 Bacteria 1263
227 Ga0501043_0327069 3300049579 Bacteria 1168
228 Ga0501048_0040068 3300049582 Bacteria 3358
229 Ga0501070_0118297 3300049586 Bacteria 2190
230 Ga0501071_0026554 3300049587 Bacteria 4066
231 Ga0501071_0027653 3300049587 Bacteria 3992
232 Ga0501071_0030124 3300049587 Bacteria 3837
233 Ga0501071_0121396 3300049587 Bacteria 1937
234 Ga0501072_0019744 3300049588 Bacteria 5213
235 Ga0501072_0073382 3300049588 Bacteria 2705
236 Ga0501073_0051421 3300049589 Bacteria 2886
237 Ga0501075_0029679 3300049591 Bacteria 4045
238 Ga0501076_0036078 3300049592 Bacteria 3872
239 Ga0501076_0138641 3300049592 Bacteria 1975
240 Ga0501077_0119168 3300049593 Bacteria 1672
241 Ga0501080_0055016 3300049742 Bacteria 3706
242 Ga0501081_0002804 3300049743 Bacteria 11058
243 Ga0501083_0039296 3300049744 Bacteria 3214
244 Ga0501044_0086689 3300049823 Bacteria 3162
245 Ga0501045_0027844 3300049824 Bacteria 4076
246 Ga0501045_0060924 3300049824 Bacteria 2767
247 Ga0501045_0404540 3300049824 Bacteria 1016
248 nmdc:mga00v17_41867_c1 3300050491 Bacteria 2163
249 nmdc:mga0yw44_47913_c1 3300050492 Bacteria 2575
250 nmdc:mga0yw44_52736_c2 3300050492 Bacteria 1306
251 nmdc:mga05p37_23901_c1 3300050507 Bacteria 7420
252 nmdc:mga05p37_451235_c1 3300050507 Bacteria 1488
253 nmdc:mga05p37_560262_c1 3300050507 Bacteria 1299
254 nmdc:mga0qj67_73257_c1 3300050509 Bacteria 2735
255 nmdc:mga06r32_126162_c1 3300050510 Bacteria 2528
256 nmdc:mga08y16_28050_c1 3300050511 Bacteria 5935
257 nmdc:mga08y16_288085_c1 3300050511 Bacteria 1693
258 nmdc:mga08y16_58425_c1 3300050511 Bacteria 4030
259 Ga0495601_0001946 3300053077 Bacteria 11558
260 Ga0495619_0017184 3300053085 Bacteria 4582
261 Ga0500616_0004097 3300053153 Bacteria 10584
262 Ga0501084_0029777 3300054114 Bacteria 4566
263 Ga0501082_0006969 3300060353 Bacteria 9762
264 Ga0501082_0032951 3300060353 Bacteria 4468
265 Ga0530510_0005169 3300061734 Bacteria 9003
266 Ga0530510_0055712 3300061734 Bacteria 2856
267 Ga0530510_0179168 3300061734 Bacteria 1571

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035117 Ga0373953_0083942 Ga0373953_0083942_431_1285 283
2 3300050511 nmdc:mga08y16_288085_c1 nmdc:mga08y16_288085_c1_27_941 297
3 3300044842 Ga0466957_0255147 Ga0466957_0255147_248_1153 300
4 3300005327 Ga0070658_10029535 Ga0070658_100295354 309
5 3300035112 Ga0373932_0077813 Ga0373932_0077813_12_968 311
6 3300047471 Ga0495684_0006606 Ga0495684_0006606_2702_3724 314
7 3300049578 Ga0501042_0168079 Ga0501042_0168079_582_1565 314
8 3300049593 Ga0501077_0119168 Ga0501077_0119168_15_998 314
9 3300049824 Ga0501045_0404540 Ga0501045_0404540_13_960 314
10 3300061734 Ga0530510_0179168 Ga0530510_0179168_41_1024 314
11 3300003373 JGI25407J50210_10003345 JGI25407J50210_100033452 318
12 3300049568 Ga0501031_0058663 Ga0501031_0058663_279_1247 321
13 3300049573 Ga0501037_0021113 Ga0501037_0021113_1728_2696 321
14 3300049575 Ga0501039_0040402 Ga0501039_0040402_747_1715 321
15 3300049589 Ga0501073_0051421 Ga0501073_0051421_269_1237 321
16 3300049742 Ga0501080_0055016 Ga0501080_0055016_2135_3103 321
17 3300049744 Ga0501083_0039296 Ga0501083_0039296_1863_2831 321
18 3300049823 Ga0501044_0086689 Ga0501044_0086689_1595_2563 321
19 3300005329 Ga0070683_100002002 Ga0070683_10000200215 323
20 3300005341 Ga0070691_10028236 Ga0070691_100282363 323
21 3300005366 Ga0070659_100005882 Ga0070659_1000058828 323
22 3300005530 Ga0070679_100028676 Ga0070679_1000286764 323
23 3300005564 Ga0070664_100244807 Ga0070664_1002448072 323
24 3300005616 Ga0068852_100043659 Ga0068852_1000436593 323
25 3300006844 Ga0075428_100138236 Ga0075428_1001382363 323
26 3300009093 Ga0105240_10027193 Ga0105240_100271933 323
27 3300009551 Ga0105238_10031972 Ga0105238_100319724 323
28 3300013104 Ga0157370_10009956 Ga0157370_1000995612 323
29 3300013105 Ga0157369_10011528 Ga0157369_100115284 323
30 3300013307 Ga0157372_10007815 Ga0157372_100078159 323
31 3300020081 Ga0206354_10891260 Ga0206354_108912603 323
32 3300020082 Ga0206353_10366517 Ga0206353_103665172 323
33 3300025912 Ga0207707_10011203 Ga0207707_100112033 323
34 3300025913 Ga0207695_10262808 Ga0207695_102628082 323
35 3300025914 Ga0207671_10044859 Ga0207671_100448592 323
36 3300025917 Ga0207660_10176373 Ga0207660_101763732 323
37 3300025919 Ga0207657_10009802 Ga0207657_100098023 323
38 3300025921 Ga0207652_10070792 Ga0207652_100707923 323
39 3300026067 Ga0207678_10092888 Ga0207678_100928882 323
40 3300031731 Ga0307405_10056334 Ga0307405_100563341 323
41 3300031903 Ga0307407_10073975 Ga0307407_100739752 323
42 3300032005 Ga0307411_10188864 Ga0307411_101888642 323
43 3300037466 Ga0395898_0102409 Ga0395898_0102409_1573_2565 323
44 3300049575 Ga0501039_0171504 Ga0501039_0171504_654_1649 325
45 3300042439 Ga0439464_0010134 Ga0439464_0010134_53_1039 326
46 3300045836 Ga0466958_0120102 Ga0466958_0120102_391_1377 326
47 3300050492 nmdc:mga0yw44_47913_c1 nmdc:mga0yw44_47913_c1_1190_2185 326
48 3300050492 nmdc:mga0yw44_52736_c2 nmdc:mga0yw44_52736_c2_35_1039 326
49 3300053077 Ga0495601_0001946 Ga0495601_0001946_26_1051 326
50 3300006844 Ga0075428_100078167 Ga0075428_1000781673 327
51 3300037466 Ga0395898_0553540 Ga0395898_0553540_46_1029 327
52 3300048915 Ga0496112_0340900 Ga0496112_0340900_23_1009 327
53 3300005937 Ga0081455_10082841 Ga0081455_100828412 329
54 3300045976 Ga0466967_0408288 Ga0466967_0408288_279_1301 333
55 3300053085 Ga0495619_0017184 Ga0495619_0017184_2525_3544 333
56 3300009094 Ga0111539_10157664 Ga0111539_101576643 334
57 3300048918 Ga0496115_0000017 Ga0496115_0000017_70103_71125 334
58 3300046691 Ga0495670_0120117 Ga0495670_0120117_47_1075 337
59 3300048916 Ga0496113_0029691 Ga0496113_0029691_730_1869 339
60 3300046459 Ga0495629_0149968 Ga0495629_0149968_422_1507 340
61 3300048903 Ga0496100_0012959 Ga0496100_0012959_2757_3800 340
62 3300046691 Ga0495670_0157419 Ga0495670_0157419_113_1156 341
63 3300061734 Ga0530510_0055712 Ga0530510_0055712_284_1330 342
64 3300005937 Ga0081455_10112970 Ga0081455_101129702 343
65 3300005981 Ga0081538_10011502 Ga0081538_100115027 345
66 3300045836 Ga0466958_0153667 Ga0466958_0153667_114_1154 345
67 3300049572 Ga0501036_0039269 Ga0501036_0039269_2220_3296 345
68 3300049576 Ga0501040_0018421 Ga0501040_0018421_2358_3434 345
69 3300049578 Ga0501042_0032667 Ga0501042_0032667_333_1409 345
70 3300049586 Ga0501070_0118297 Ga0501070_0118297_465_1541 345
71 3300049587 Ga0501071_0027653 Ga0501071_0027653_163_1239 345
72 3300049587 Ga0501071_0030124 Ga0501071_0030124_2441_3517 345
73 3300049588 Ga0501072_0073382 Ga0501072_0073382_392_1468 345
74 3300049592 Ga0501076_0138641 Ga0501076_0138641_721_1797 345
75 3300049824 Ga0501045_0027844 Ga0501045_0027844_2506_3582 345
76 3300060353 Ga0501082_0032951 Ga0501082_0032951_2547_3623 345
77 3300048915 Ga0496112_0000013 Ga0496112_0000013_235982_237046 348
78 3300005981 Ga0081538_10000035 Ga0081538_1000003566 349
79 3300011119 Ga0105246_10040396 Ga0105246_100403963 350
80 3300028563 Ga0265319_1010432 Ga0265319_10104323 350
81 3300044693 Ga0466961_0156848 Ga0466961_0156848_11_1093 350
82 3300005444 Ga0070694_100196062 Ga0070694_1001960622 351
83 3300009094 Ga0111539_10077902 Ga0111539_100779023 351
84 3300009147 Ga0114129_10006344 Ga0114129_100063443 351
85 3300013105 Ga0157369_10438405 Ga0157369_104384052 351
86 3300031824 Ga0307413_10014941 Ga0307413_100149412 351
87 3300031852 Ga0307410_10042752 Ga0307410_100427522 351
88 3300031901 Ga0307406_10034550 Ga0307406_100345503 351
89 3300031911 Ga0307412_10064169 Ga0307412_100641692 351
90 3300032002 Ga0307416_100031212 Ga0307416_1000312122 351
91 3300032005 Ga0307411_10353275 Ga0307411_103532751 351
92 3300032126 Ga0307415_100150148 Ga0307415_1001501482 351
93 3300044694 Ga0466963_0199485 Ga0466963_0199485_296_1357 351
94 3300044735 Ga0466968_0023848 Ga0466968_0023848_400_1461 351
95 3300045836 Ga0466958_0077765 Ga0466958_0077765_455_1516 351
96 3300045976 Ga0466967_0416791 Ga0466967_0416791_100_1161 351
97 3300047320 Ga0495672_0061365 Ga0495672_0061365_699_1775 351
98 3300050507 nmdc:mga05p37_23901_c1 nmdc:mga05p37_23901_c1_6298_7371 351
99 3300050511 nmdc:mga08y16_58425_c1 nmdc:mga08y16_58425_c1_275_1348 351
100 3300013307 Ga0157372_10131846 Ga0157372_101318463 352
101 3300025915 Ga0207693_10073711 Ga0207693_100737111 352
102 3300005437 Ga0070710_10000005 Ga0070710_10000005164 353
103 3300005937 Ga0081455_10018249 Ga0081455_100182492 353
104 3300005983 Ga0081540_1005020 Ga0081540_10050205 353
105 3300006051 Ga0075364_10213927 Ga0075364_102139271 353
106 3300009545 Ga0105237_10000495 Ga0105237_1000049550 353
107 3300025906 Ga0207699_10080488 Ga0207699_100804884 353
108 3300025914 Ga0207671_10039798 Ga0207671_100397983 353
109 3300031251 Ga0265327_10025711 Ga0265327_100257113 353
110 3300037466 Ga0395898_0186737 Ga0395898_0186737_472_1551 353
111 3300038443 Ga0395901_0373608 Ga0395901_0373608_209_1288 353
112 3300046517 Ga0495630_0033660 Ga0495630_0033660_2573_3640 353
113 3300046675 Ga0495657_0000013 Ga0495657_0000013_5472_6539 353
114 3300048918 Ga0496115_0000012 Ga0496115_0000012_151259_152341 353
115 3300050491 nmdc:mga00v17_41867_c1 nmdc:mga00v17_41867_c1_986_2074 353
116 3300005459 Ga0068867_100094504 Ga0068867_1000945043 354
117 3300005578 Ga0068854_100106876 Ga0068854_1001068762 354
118 3300005840 Ga0068870_10068796 Ga0068870_100687962 354
119 3300005983 Ga0081540_1000554 Ga0081540_100055418 354
120 3300005985 Ga0081539_10003820 Ga0081539_1000382010 354
121 3300006038 Ga0075365_10003891 Ga0075365_100038913 354
122 3300006846 Ga0075430_100034598 Ga0075430_1000345984 354
123 3300009147 Ga0114129_10025786 Ga0114129_100257863 354
124 3300009147 Ga0114129_10319468 Ga0114129_103194684 354
125 3300009148 Ga0105243_10188275 Ga0105243_101882752 354
126 3300025901 Ga0207688_10046036 Ga0207688_100460362 354
127 3300026075 Ga0207708_10008968 Ga0207708_100089686 354
128 3300026075 Ga0207708_10286724 Ga0207708_102867242 354
129 3300026089 Ga0207648_10085237 Ga0207648_100852373 354
130 3300026118 Ga0207675_100068996 Ga0207675_1000689963 354
131 3300026121 Ga0207683_10063390 Ga0207683_100633903 354
132 3300041460 Ga0451802_1340893 Ga0451802_1340893_229_1305 354
133 3300044901 Ga0466960_0000071 Ga0466960_0000071_4555_5631 354
134 3300046471 Ga0495650_0000079 Ga0495650_0000079_83351_84424 354
135 3300048904 Ga0496101_0088662 Ga0496101_0088662_371_1447 354
136 3300048915 Ga0496112_0007448 Ga0496112_0007448_1193_2266 354
137 3300048924 Ga0496121_0020047 Ga0496121_0020047_2549_3622 354
138 3300049571 Ga0501034_0199550 Ga0501034_0199550_62_1144 354
139 3300049572 Ga0501036_0114437 Ga0501036_0114437_12_1094 354
140 3300049576 Ga0501040_0081676 Ga0501040_0081676_1109_2191 354
141 3300049577 Ga0501041_0021960 Ga0501041_0021960_757_1839 354
142 3300049579 Ga0501043_0327069 Ga0501043_0327069_25_1107 354
143 3300049582 Ga0501048_0040068 Ga0501048_0040068_206_1288 354
144 3300049587 Ga0501071_0026554 Ga0501071_0026554_1423_2505 354
145 3300049588 Ga0501072_0019744 Ga0501072_0019744_1464_2546 354
146 3300049591 Ga0501075_0029679 Ga0501075_0029679_774_1856 354
147 3300049592 Ga0501076_0036078 Ga0501076_0036078_275_1357 354
148 3300049743 Ga0501081_0002804 Ga0501081_0002804_8512_9594 354
149 3300049824 Ga0501045_0060924 Ga0501045_0060924_259_1341 354
150 3300050507 nmdc:mga05p37_451235_c1 nmdc:mga05p37_451235_c1_32_1117 354
151 3300050507 nmdc:mga05p37_560262_c1 nmdc:mga05p37_560262_c1_143_1228 354
152 3300050509 nmdc:mga0qj67_73257_c1 nmdc:mga0qj67_73257_c1_254_1339 354
153 3300050510 nmdc:mga06r32_126162_c1 nmdc:mga06r32_126162_c1_1374_2456 354
154 3300053153 Ga0500616_0004097 Ga0500616_0004097_4695_5771 354
155 3300054114 Ga0501084_0029777 Ga0501084_0029777_3189_4271 354
156 3300060353 Ga0501082_0006969 Ga0501082_0006969_7770_8852 354
157 3300061734 Ga0530510_0005169 Ga0530510_0005169_6502_7584 354
158 3300006175 Ga0070712_100002700 Ga0070712_1000027004 355
159 3300006846 Ga0075430_100226234 Ga0075430_1002262342 355
160 3300044684 Ga0466966_0074125 Ga0466966_0074125_793_1863 355
161 3300046461 Ga0495641_0094397 Ga0495641_0094397_91_1203 355
162 3300046663 Ga0495635_0000034 Ga0495635_0000034_59941_61089 355
163 3300048907 Ga0496104_0244178 Ga0496104_0244178_352_1428 355
164 3300048915 Ga0496112_0382592 Ga0496112_0382592_124_1200 355
165 3300005435 Ga0070714_100045390 Ga0070714_1000453902 356
166 3300006175 Ga0070712_100000002 Ga0070712_100000002177 356
167 3300025915 Ga0207693_10000014 Ga0207693_1000001430 356
168 3300026118 Ga0207675_100401474 Ga0207675_1004014741 356
169 3300028556 Ga0265337_1010487 Ga0265337_10104872 356
170 3300028558 Ga0265326_10001340 Ga0265326_100013403 356
171 3300028563 Ga0265319_1001236 Ga0265319_100123611 356
172 3300028577 Ga0265318_10000650 Ga0265318_1000065010 356
173 3300028666 Ga0265336_10000002 Ga0265336_10000002100 356
174 3300028800 Ga0265338_10000001 Ga0265338_10000001714 356
175 3300029957 Ga0265324_10003956 Ga0265324_100039562 356
176 3300031247 Ga0265340_10000001 Ga0265340_10000001713 356
177 3300032002 Ga0307416_100238497 Ga0307416_1002384972 356
178 3300037418 Ga0395900_0188662 Ga0395900_0188662_916_2025 356
179 3300037466 Ga0395898_0088251 Ga0395898_0088251_1108_2190 356
180 3300037466 Ga0395898_0102181 Ga0395898_0102181_573_1682 356
181 3300038443 Ga0395901_0188967 Ga0395901_0188967_959_2041 356
182 3300039437 Ga0436365_0187154 Ga0436365_0187154_23_1102 356
183 3300044719 Ga0466971_0032673 Ga0466971_0032673_174_1247 356
184 3300045976 Ga0466967_0149776 Ga0466967_0149776_210_1328 356
185 3300046543 Ga0495645_0000021 Ga0495645_0000021_148_1224 356
186 3300047320 Ga0495672_0023280 Ga0495672_0023280_1509_2597 356
187 3300005329 Ga0070683_100008243 Ga0070683_1000082433 357
188 3300005329 Ga0070683_100380269 Ga0070683_1003802691 357
189 3300005356 Ga0070674_100235147 Ga0070674_1002351472 357
190 3300005435 Ga0070714_100009658 Ga0070714_1000096584 357
191 3300005436 Ga0070713_100039265 Ga0070713_1000392653 357
192 3300005457 Ga0070662_100318625 Ga0070662_1003186251 357
193 3300005535 Ga0070684_100038772 Ga0070684_1000387723 357
194 3300006028 Ga0070717_10000004 Ga0070717_10000004273 357
195 3300009553 Ga0105249_10162146 Ga0105249_101621462 357
196 3300021358 Ga0213873_10009156 Ga0213873_100091562 357
197 3300021384 Ga0213876_10021695 Ga0213876_100216951 357
198 3300025929 Ga0207664_10000922 Ga0207664_1000092212 357
199 3300026067 Ga0207678_10115268 Ga0207678_101152683 357
200 3300026089 Ga0207648_10323688 Ga0207648_103236882 357
201 3300031731 Ga0307405_10283660 Ga0307405_102836601 357
202 3300031995 Ga0307409_100095245 Ga0307409_1000952453 357
203 3300032002 Ga0307416_100043986 Ga0307416_1000439862 357
204 3300037853 Ga0436364_0259389 Ga0436364_0259389_13196_14275 357
205 3300039437 Ga0436365_0125141 Ga0436365_0125141_1686_2765 357
206 3300039437 Ga0436365_0340991 Ga0436365_0340991_901_1980 357
207 3300039453 Ga0436362_0432260 Ga0436362_0432260_2236_3315 357
208 3300044683 Ga0466965_0141026 Ga0466965_0141026_38_1117 357
209 3300044684 Ga0466966_0051349 Ga0466966_0051349_1239_2321 357
210 3300044684 Ga0466966_0081190 Ga0466966_0081190_33_1112 357
211 3300044693 Ga0466961_0006229 Ga0466961_0006229_2045_3124 357
212 3300044694 Ga0466963_0009646 Ga0466963_0009646_527_1603 357
213 3300044694 Ga0466963_0123395 Ga0466963_0123395_555_1631 357
214 3300044765 Ga0466970_0110233 Ga0466970_0110233_314_1396 357
215 3300045836 Ga0466958_0100358 Ga0466958_0100358_574_1656 357
216 3300045976 Ga0466967_0011647 Ga0466967_0011647_1040_2116 357
217 3300045976 Ga0466967_0141840 Ga0466967_0141840_967_2043 357
218 3300045976 Ga0466967_0170697 Ga0466967_0170697_547_1623 357
219 3300046515 Ga0495620_0072498 Ga0495620_0072498_238_1320 357
220 3300046543 Ga0495645_0001238 Ga0495645_0001238_5444_6583 357
221 3300048088 Ga0495602_0314832 Ga0495602_0314832_40_1119 357
222 3300048903 Ga0496100_0000156 Ga0496100_0000156_4913_5989 357
223 3300048904 Ga0496101_0060308 Ga0496101_0060308_86_1162 357
224 3300048907 Ga0496104_0000037 Ga0496104_0000037_22006_23304 357
225 3300048913 Ga0496110_0000694 Ga0496110_0000694_15425_16723 357
226 3300048913 Ga0496110_0177960 Ga0496110_0177960_327_1403 357
227 3300048914 Ga0496111_0001895 Ga0496111_0001895_6927_8225 357
228 3300048927 Ga0496124_0040021 Ga0496124_0040021_1717_2808 357
229 3300003203 JGI25406J46586_10011489 JGI25406J46586_100114892 358
230 3300005338 Ga0068868_100021426 Ga0068868_1000214264 358
231 3300005355 Ga0070671_100144106 Ga0070671_1001441062 358
232 3300005441 Ga0070700_100166691 Ga0070700_1001666912 358
233 3300005834 Ga0068851_10039853 Ga0068851_100398531 358
234 3300005844 Ga0068862_100319037 Ga0068862_1003190372 358
235 3300005937 Ga0081455_10108607 Ga0081455_101086073 358
236 3300006844 Ga0075428_100017157 Ga0075428_1000171573 358
237 3300009094 Ga0111539_10047467 Ga0111539_100474673 358
238 3300009098 Ga0105245_10020903 Ga0105245_100209034 358
239 3300009098 Ga0105245_10359663 Ga0105245_103596631 358
240 3300009553 Ga0105249_10150516 Ga0105249_101505162 358
241 3300011119 Ga0105246_10041031 Ga0105246_100410313 358
242 3300014745 Ga0157377_10089578 Ga0157377_100895781 358
243 3300025944 Ga0207661_10250279 Ga0207661_102502792 358
244 3300026035 Ga0207703_10319707 Ga0207703_103197071 358
245 3300026075 Ga0207708_10093395 Ga0207708_100933953 358
246 3300026078 Ga0207702_10178485 Ga0207702_101784852 358
247 3300027907 Ga0207428_10053265 Ga0207428_100532653 358
248 3300031824 Ga0307413_10059967 Ga0307413_100599673 358
249 3300031852 Ga0307410_10056066 Ga0307410_100560663 358
250 3300031901 Ga0307406_10264912 Ga0307406_102649121 358
251 3300032126 Ga0307415_100072202 Ga0307415_1000722023 358
252 3300038443 Ga0395901_0267913 Ga0395901_0267913_538_1617 358
253 3300044694 Ga0466963_0006377 Ga0466963_0006377_3471_4553 358
254 3300044694 Ga0466963_0067771 Ga0466963_0067771_729_1808 358
255 3300044694 Ga0466963_0086301 Ga0466963_0086301_468_1547 358
256 3300044694 Ga0466963_0168120 Ga0466963_0168120_293_1372 358
257 3300044706 Ga0466964_0076662 Ga0466964_0076662_156_1235 358
258 3300044765 Ga0466970_0183419 Ga0466970_0183419_35_1120 358
259 3300045976 Ga0466967_0005182 Ga0466967_0005182_3501_4580 358
260 3300045976 Ga0466967_0012367 Ga0466967_0012367_4201_5283 358
261 3300045976 Ga0466967_0062330 Ga0466967_0062330_2150_3232 358
262 3300045976 Ga0466967_0071068 Ga0466967_0071068_479_1561 358
263 3300045976 Ga0466967_0079295 Ga0466967_0079295_1501_2580 358
264 3300045976 Ga0466967_0213408 Ga0466967_0213408_415_1494 358
265 3300049578 Ga0501042_0256244 Ga0501042_0256244_19_1137 358
266 3300049587 Ga0501071_0121396 Ga0501071_0121396_12_1130 358
267 3300050511 nmdc:mga08y16_28050_c1 nmdc:mga08y16_28050_c1_1319_2395 358

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

24

270

0.99

PF08669

GCV_T_C

Glycine cleavage T-protein C-terminal barrel domain

309

382

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.9643 8 354
1wsr-assembly1.cif.gz_A crystal structure of human t-protein of glycine cleavage system 0.9642 7 354
1v5v-assembly1.cif.gz_B crystal structure of a component of glycine cleavage system: t-protein from pyrococcus horikoshii ot3 at 1.5 a resolution 0.9544 8 355
1yx2-assembly1.cif.gz_A crystal structure of the probable aminomethyltransferase from bacillus subtilis 0.9502 8 352
4pab-assembly2.cif.gz_B crystal structure of the precursor form of rat dmgdh complexed with tetrahydrofolate 0.9433 11 354
ID Description Score Start End Superfamily
1wosA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9736 57 141 3.30.70.1400
3girA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9665 60 140 3.30.70.1400
af_P48015_310_389_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9647 280 350 2.40.30.110
af_Q4D100_288_361_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9568 283 348 2.40.30.110
af_Q9VKR4_313_397_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9532 278 355 2.40.30.110
ID Description Score Start End GO Terms
AF-A0A840I8E1-F1-model_v4 aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9904 8 354 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008168
GO:0008483
GO:0032259
AF-A0A7C7CQ33-F1-model_v4 Glycine cleavage system aminomethyltransferase GcvT 0.9891 8 166 GO:0005829
GO:0008168
GO:0032259
AF-A0A7W1GMG9-F1-model_v4 Glycine cleavage system protein T 0.9884 283 356
AF-A0A660RE58-F1-model_v4 Glycine cleavage system aminomethyltransferase GcvT 0.9842 6 128 GO:0005829
GO:0008168
GO:0032259
AF-A0A497EXD1-F1-model_v4 Glycine cleavage system aminomethyltransferase GcvT 0.9831 25 168 GO:0008168
GO:0032259

Feature Viewer

pLDDT pTM Quality
95.34 0.91 High
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Predicted Structure (AlphaFold2)

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