F374665

General Info

Members Datasets Scaffolds Average Seq Length
267 171 534 524

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10051894|Ga0070717_100518942
Length 569
Sequence MSGEQASAPHDRIDPTRYPDRKMMERARGNVVRWLFDSRHGAADRLIPRWIFLRLLAVWYFSAFYSLLFQIKGLMGSQGILPAGSYLAAVARALGVTRYWFAPTLFWFSSSSRMLMAIMIVGLIASVVAFFNLWPRLSLLATNVWSNYQSDGMLLEAGFLSLFFAPRGLMPGWGADSQPSRVSLFLLQWEWFRIYFESGMVKLLSGDEQWRHLTAMDEYYQNGPLPTWIGWYVEHLPRWFHAASALGTLVMEFAVVWMMFFPRRGRIICFFIVTPWEIGVILTANYTFLNYLVLSLGFLLLDDKFLRRYVPARFRPPEPVIAAEPEEEPSLSILFSDDAPVAPRETVHAEKHPKPEPRGRPIRYLREFGFAVSVVMLAWIAYDTTVEMIGLPLRGIPLPTAPIAALDPFRIANQYGLFAVMTRGRYEIEFQGSNDGTNWVAYPFRYKPQALDRAPGIYAPYQPRFEWNLWFASLGEWRQNDFVPLTEERLLANDPDVLGLFQSNPFPNAPPRFTRAVLWQYWFTTGDEKRRTGNWWKRQWLGLYAPEITLTPEGRPEVVQWADELAPHG

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
125 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
128 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
129 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
130 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
131 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
132 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
133 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
134 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
135 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
136 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
137 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
138 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
139 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
140 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
141 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
142 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
143 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
144 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
145 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
146 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
147 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
148 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
149 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
150 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
151 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
155 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
156 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
160 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
161 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
164 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.88
Metatranscriptomes 1.12
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 1.87
Rhizosphere 95.51
Stem 0
Stem Tuber 0
Unclassified 11.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10051894 3300006028 Bacteria 3377
2 JGI24749J21850_1006629 3300002076 Bacteria 1611
3 rootH2_10200965 3300003320 Bacteria 2515
4 Ga0070658_10000004 3300005327 Bacteria 402230
5 Ga0070658_10000963 3300005327 Bacteria 24659
6 Ga0070683_100188081 3300005329 Unclassified 1960
7 Ga0070677_10008048 3300005333 Bacteria 3535
8 Ga0070680_100032495 3300005336 Bacteria 4201
9 Ga0070680_100053164 3300005336 Unclassified 3305
10 Ga0068868_100000283 3300005338 Bacteria 34191
11 Ga0070660_100000070 3300005339 Bacteria 60814
12 Ga0070660_100003540 3300005339 Bacteria 10775
13 Ga0070660_100007086 3300005339 Bacteria 7790
14 Ga0070689_100003918 3300005340 Bacteria 9979
15 Ga0070687_100000009 3300005343 Bacteria 59511
16 Ga0070661_100000103 3300005344 Bacteria 69885
17 Ga0070675_100003360 3300005354 Bacteria 12119
18 Ga0070674_100000135 3300005356 Bacteria 33888
19 Ga0070688_100000005 3300005365 Bacteria 92266
20 Ga0070659_100000074 3300005366 Bacteria 78529
21 Ga0070659_100009225 3300005366 Bacteria 7241
22 Ga0070709_10051340 3300005434 Bacteria 2588
23 Ga0070714_100031764 3300005435 Bacteria 4408
24 Ga0070713_100021621 3300005436 Bacteria 4953
25 Ga0070713_100026130 3300005436 Bacteria 4579
26 Ga0070713_100032611 3300005436 Bacteria 4163
27 Ga0070710_10004744 3300005437 Bacteria 6428
28 Ga0070711_100019811 3300005439 Bacteria 4324
29 Ga0070711_100044141 3300005439 Unclassified 3024
30 Ga0070705_100000759 3300005440 Bacteria 18290
31 Ga0070708_100000880 3300005445 Bacteria 22703
32 Ga0070708_100022128 3300005445 Bacteria 5388
33 Ga0070708_100028868 3300005445 Unclassified 4777
34 Ga0070681_10002339 3300005458 Bacteria 17317
35 Ga0070681_10057376 3300005458 Unclassified 3873
36 Ga0070681_10120539 3300005458 Bacteria 2558
37 Ga0070685_10000311 3300005466 Bacteria 30524
38 Ga0070706_100001099 3300005467 Bacteria 29242
39 Ga0070706_100033620 3300005467 Unclassified 4733
40 Ga0070706_100167084 3300005467 Bacteria 2054
41 Ga0070707_100007958 3300005468 Bacteria 9844
42 Ga0070707_100014060 3300005468 Bacteria 7499
43 Ga0070698_100000286 3300005471 Bacteria 51545
44 Ga0070699_100009663 3300005518 Bacteria 8351
45 Ga0070679_100006351 3300005530 Bacteria 11004
46 Ga0070679_100060784 3300005530 Unclassified 3765
47 Ga0070684_100008611 3300005535 Bacteria 7990
48 Ga0070684_100020822 3300005535 Bacteria 5443
49 Ga0070697_100001242 3300005536 Bacteria 19280
50 Ga0070697_100002815 3300005536 Bacteria 13391
51 Ga0068853_100000296 3300005539 Bacteria 34899
52 Ga0070672_100002278 3300005543 Bacteria 12118
53 Ga0070686_100001037 3300005544 Bacteria 15979
54 Ga0070693_100013481 3300005547 Bacteria 4163
55 Ga0068855_100006204 3300005563 Bacteria 14570
56 Ga0068855_100015702 3300005563 Bacteria 9108
57 Ga0070664_100009270 3300005564 Bacteria 7989
58 Ga0068857_100001318 3300005577 Bacteria 19527
59 Ga0068854_100000143 3300005578 Bacteria 49770
60 Ga0068856_100015404 3300005614 Bacteria 7388
61 Ga0068856_100015464 3300005614 Bacteria 7373
62 Ga0068856_100070641 3300005614 Unclassified 3454
63 Ga0068852_100007487 3300005616 Bacteria 7970
64 Ga0068859_100000252 3300005617 Bacteria 53087
65 Ga0068864_100002552 3300005618 Bacteria 15039
66 Ga0068861_100000024 3300005719 Bacteria 72294
67 Ga0068870_10000013 3300005840 Bacteria 64323
68 Ga0068863_100000411 3300005841 Bacteria 43564
69 Ga0068860_100018874 3300005843 Bacteria 6700
70 Ga0081540_1003984 3300005983 Bacteria 11456
71 Ga0070717_10003453 3300006028 Bacteria 11310
72 Ga0070716_100004620 3300006173 Bacteria 6600
73 Ga0070716_100126769 3300006173 Unclassified 1607
74 Ga0070712_100000818 3300006175 Bacteria 18457
75 Ga0070712_100001925 3300006175 Bacteria 12700
76 Ga0070712_100050087 3300006175 Unclassified 2904
77 Ga0070712_100069427 3300006175 Bacteria 2514
78 Ga0070712_100114224 3300006175 Bacteria 2021
79 Ga0068865_100000729 3300006881 Bacteria 18522
80 Ga0075436_100011263 3300006914 Bacteria 6134
81 Ga0075436_100016659 3300006914 Bacteria 5031
82 Ga0075436_100044455 3300006914 Bacteria 3063
83 Ga0097620_100000252 3300006931 Bacteria 53087
84 Ga0075435_100014839 3300007076 Bacteria 5840
85 Ga0099794_10021616 3300007265 Bacteria 2925
86 Ga0099794_10028945 3300007265 Bacteria 2578
87 Ga0099794_10029462 3300007265 Bacteria 2558
88 Ga0105240_10002003 3300009093 Bacteria 33590
89 Ga0105240_10029474 3300009093 Bacteria 7149
90 Ga0105240_10098271 3300009093 Bacteria 3565
91 Ga0105245_10000469 3300009098 Bacteria 36926
92 Ga0105245_10034266 3300009098 Bacteria 4503
93 Ga0105241_10076825 3300009174 Bacteria 2605
94 Ga0105248_10000002 3300009177 Bacteria 1054120
95 Ga0105248_10064951 3300009177 Bacteria 4097
96 Ga0105237_10000433 3300009545 Bacteria 59532
97 Ga0105237_10079443 3300009545 Unclassified 3270
98 Ga0105238_10021721 3300009551 Bacteria 6537
99 Ga0105238_10026327 3300009551 Bacteria 5928
100 Ga0099796_10006382 3300010159 Unclassified 3013
101 Ga0105239_10000837 3300010375 Bacteria 43680
102 Ga0105246_10000153 3300011119 Bacteria 32719
103 Ga0157373_10013297 3300013100 Bacteria 6040
104 Ga0157373_10030555 3300013100 Bacteria 3877
105 Ga0157371_10000442 3300013102 Bacteria 50765
106 Ga0157370_10005398 3300013104 Bacteria 14339
107 Ga0157370_10016653 3300013104 Bacteria 7438
108 Ga0157370_10031495 3300013104 Bacteria 5185
109 Ga0157370_10055479 3300013104 Bacteria 3774
110 Ga0157369_10000633 3300013105 Bacteria 45513
111 Ga0157369_10014460 3300013105 Bacteria 8910
112 Ga0157369_10026099 3300013105 Bacteria 6482
113 Ga0157369_10081349 3300013105 Bacteria 3466
114 Ga0157369_10111296 3300013105 Bacteria 2910
115 Ga0157374_10079051 3300013296 Bacteria 3116
116 Ga0157378_10000071 3300013297 Bacteria 91313
117 Ga0157378_10010818 3300013297 Bacteria 7977
118 Ga0157372_10000952 3300013307 Bacteria 31614
119 Ga0157372_10060376 3300013307 Bacteria 4243
120 Ga0157372_10119284 3300013307 Unclassified 3028
121 Ga0157375_10022764 3300013308 Bacteria 5770
122 Ga0163163_10008619 3300014325 Bacteria 9067
123 Ga0163163_10137775 3300014325 Bacteria 2482
124 Ga0157377_10000209 3300014745 Bacteria 31916
125 Ga0157376_10000781 3300014969 Bacteria 20810
126 Ga0157376_10013146 3300014969 Bacteria 6169
127 Ga0213872_10008600 3300021361 Unclassified 4936
128 Ga0213872_10011469 3300021361 Unclassified 4190
129 Ga0213872_10021343 3300021361 Bacteria 2982
130 Ga0213876_10007212 3300021384 Bacteria 6060
131 Ga0207697_10000172 3300025315 Bacteria 33071
132 Ga0207682_10009945 3300025893 Bacteria 3736
133 Ga0207692_10004131 3300025898 Bacteria 5727
134 Ga0207710_10011326 3300025900 Bacteria 3755
135 Ga0207647_10000658 3300025904 Bacteria 26983
136 Ga0207699_10043195 3300025906 Bacteria 2617
137 Ga0207699_10074051 3300025906 Bacteria 2091
138 Ga0207645_10000005 3300025907 Bacteria 210700
139 Ga0207705_10000024 3300025909 Bacteria 259977
140 Ga0207705_10012773 3300025909 Bacteria 6061
141 Ga0207684_10022120 3300025910 Bacteria 5429
142 Ga0207684_10028711 3300025910 Unclassified 4739
143 Ga0207684_10199098 3300025910 Unclassified 1728
144 Ga0207654_10015753 3300025911 Bacteria 3929
145 Ga0207707_10018106 3300025912 Bacteria 6138
146 Ga0207695_10001495 3300025913 Bacteria 38982
147 Ga0207695_10005955 3300025913 Bacteria 15958
148 Ga0207693_10000020 3300025915 Bacteria 132847
149 Ga0207693_10035743 3300025915 Bacteria 3917
150 Ga0207693_10108844 3300025915 Bacteria 2174
151 Ga0207663_10026309 3300025916 Unclassified 3375
152 Ga0207657_10000024 3300025919 Bacteria 152152
153 Ga0207657_10008427 3300025919 Bacteria 10461
154 Ga0207657_10015009 3300025919 Bacteria 7523
155 Ga0207652_10053087 3300025921 Unclassified 3481
156 Ga0207646_10033774 3300025922 Unclassified 4625
157 Ga0207694_10010152 3300025924 Bacteria 7096
158 Ga0207650_10000402 3300025925 Bacteria 38840
159 Ga0207659_10000174 3300025926 Bacteria 38550
160 Ga0207700_10008865 3300025928 Bacteria 6255
161 Ga0207700_10020688 3300025928 Bacteria 4476
162 Ga0207700_10097855 3300025928 Bacteria 2333
163 Ga0207664_10028865 3300025929 Bacteria 4220
164 Ga0207664_10108818 3300025929 Unclassified 2302
165 Ga0207690_10010507 3300025932 Bacteria 5506
166 Ga0207706_10000063 3300025933 Bacteria 109098
167 Ga0207669_10002196 3300025937 Bacteria 8291
168 Ga0207704_10012601 3300025938 Bacteria 4200
169 Ga0207665_10021445 3300025939 Bacteria 4248
170 Ga0207665_10040465 3300025939 Unclassified 3110
171 Ga0207711_10000008 3300025941 Bacteria 597686
172 Ga0207711_10000045 3300025941 Bacteria 155245
173 Ga0207689_10000022 3300025942 Bacteria 109850
174 Ga0207679_10000301 3300025945 Bacteria 37052
175 Ga0207667_10000199 3300025949 Bacteria 87200
176 Ga0207667_10002260 3300025949 Bacteria 24207
177 Ga0207640_10000023 3300025981 Bacteria 160979
178 Ga0207677_10001311 3300026023 Bacteria 13362
179 Ga0207703_10001780 3300026035 Bacteria 19226
180 Ga0207639_10000016 3300026041 Bacteria 262939
181 Ga0207702_10001663 3300026078 Bacteria 21966
182 Ga0207702_10023572 3300026078 Bacteria 5105
183 Ga0207702_10135311 3300026078 Bacteria 2223
184 Ga0207641_10206192 3300026088 Bacteria 1815
185 Ga0207676_10113401 3300026095 Bacteria 2272
186 Ga0207676_10167653 3300026095 Unclassified 1910
187 Ga0207674_10000787 3300026116 Bacteria 41353
188 Ga0207674_10043785 3300026116 Bacteria 4614
189 Ga0207674_10163079 3300026116 Unclassified 2183
190 Ga0207675_100000027 3300026118 Bacteria 109986
191 Ga0207683_10167678 3300026121 Bacteria 1988
192 Ga0207698_10014201 3300026142 Bacteria 5284
193 Ga0207698_10020235 3300026142 Bacteria 4576
194 Ga0209588_1001273 3300027671 Bacteria 6534
195 Ga0268266_10000915 3300028379 Bacteria 37966
196 Ga0268264_10000409 3300028381 Bacteria 60923
197 Ga0265338_10001393 3300028800 Bacteria 39373
198 Ga0265762_1001069 3300030760 Unclassified 4930
199 Ga0265760_10004382 3300031090 Unclassified 4056
200 Ga0265760_10004507 3300031090 Bacteria 3996
201 Ga0265330_10000625 3300031235 Bacteria 22842
202 Ga0265325_10002729 3300031241 Bacteria 11792
203 Ga0265325_10022162 3300031241 Bacteria 3483
204 Ga0265339_10000331 3300031249 Bacteria 38104
205 Ga0265339_10000904 3300031249 Bacteria 22805
206 Ga0265316_10002941 3300031344 Bacteria 17439
207 Ga0265316_10005414 3300031344 Bacteria 12399
208 Ga0265316_10033698 3300031344 Bacteria 4168
209 Ga0265313_10000434 3300031595 Bacteria 44323
210 Ga0265314_10001559 3300031711 Bacteria 25236
211 Ga0265314_10012989 3300031711 Bacteria 6762
212 Ga0265342_10005025 3300031712 Bacteria 10202
213 Ga0265342_10018214 3300031712 Bacteria 4555
214 Ga0265342_10025971 3300031712 Bacteria 3675
215 Ga0316212_1003686 3300033547 Bacteria 2218
216 Ga0373954_0008479 3300035118 Bacteria 4513
217 Ga0373956_0036915 3300035119 Bacteria 2158
218 Ga0373943_0010361 3300035170 Bacteria 4181
219 Ga0373924_0025917 3300035410 Bacteria 2321
220 Ga0373935_0007473 3300035692 Bacteria 6542
221 Ga0373927_0000179 3300035695 Bacteria 50200
222 Ga0373933_0001010 3300035724 Bacteria 17131
223 Ga0373947_0002959 3300035725 Bacteria 10138
224 Ga0373925_0000314 3300037068 Bacteria 50681
225 Ga0373925_0005854 3300037068 Bacteria 9118
226 Ga0436365_0521032 3300039437 Bacteria 6176
227 Ga0436360_0528088 3300039438 Bacteria 5318
228 Ga0436361_0132798 3300039447 Bacteria 22840
229 Ga0436361_0278206 3300039447 Bacteria 7847
230 Ga0436361_0365775 3300039447 Bacteria 3189
231 Ga0436361_0487458 3300039447 Bacteria 26038
232 Ga0436363_0178994 3300039450 Bacteria 3910
233 Ga0495592_0017002 3300046454 Eukaryota 5523
234 Ga0495653_0032204 3300046463 Bacteria 4165
235 Ga0495580_0009382 3300046472 Bacteria 7699
236 Ga0495580_0019048 3300046472 Bacteria 5103
237 Ga0495580_0022071 3300046472 Bacteria 4690
238 Ga0495580_0026948 3300046472 Bacteria 4185
239 Ga0495582_0003744 3300046473 Bacteria 8570
240 Ga0495628_0060098 3300046516 Unclassified 2983
241 Ga0495630_0110335 3300046517 Unclassified 2084
242 Ga0495587_0005213 3300046536 Bacteria 8495
243 Ga0495635_0030221 3300046663 Bacteria 3765
244 Ga0495635_0034533 3300046663 Bacteria 3508
245 Ga0495623_0015834 3300046679 Bacteria 4874
246 Ga0495623_0027618 3300046679 Bacteria 3653
247 Ga0495646_0035789 3300046680 Unclassified 3078
248 Ga0495613_0015335 3300046689 Bacteria 5697
249 Ga0495613_0089412 3300046689 Bacteria 2231
250 Ga0495604_0003611 3300047317 Bacteria 12331
251 Ga0495604_0009550 3300047317 Bacteria 7672
252 Ga0495604_0019263 3300047317 Eukaryota 5463
253 Ga0495680_0003575 3300047322 Bacteria 15217
254 Ga0495684_0086042 3300047471 Bacteria 2383
255 Ga0495602_0001481 3300048088 Bacteria 23340
256 Ga0496101_0022685 3300048904 Bacteria 4325
257 Ga0496102_0174368 3300048905 Unclassified 2024
258 Ga0496104_0003076 3300048907 Bacteria 14376
259 Ga0496104_0107851 3300048907 Bacteria 2669
260 Ga0496115_0080924 3300048918 Bacteria 2645
261 Ga0496126_0000616 3300048929 Bacteria 67097
262 nmdc:mga0rr50_17680_c1 3300050513 Bacteria 4767
263 nmdc:mga08x19_15390_c1 3300050514 Bacteria 4654
264 nmdc:mga08x19_35942_c1 3300050514 Bacteria 3136
265 nmdc:mga08x19_446_c1 3300050514 Bacteria 28333
266 Ga0495601_0001620 3300053077 Bacteria 12392
267 Ga0500595_008126 3300053119 Bacteria 4305
268 Ga0070717_10051894
269 JGI24749J21850_1006629
270 rootH2_10200965
271 Ga0070658_10000004
272 Ga0070658_10000963
273 Ga0070683_100188081
274 Ga0070677_10008048
275 Ga0070680_100032495
276 Ga0070680_100053164
277 Ga0068868_100000283
278 Ga0070660_100000070
279 Ga0070660_100003540
280 Ga0070660_100007086
281 Ga0070689_100003918
282 Ga0070687_100000009
283 Ga0070661_100000103
284 Ga0070675_100003360
285 Ga0070674_100000135
286 Ga0070688_100000005
287 Ga0070659_100000074
288 Ga0070659_100009225
289 Ga0070709_10051340
290 Ga0070714_100031764
291 Ga0070713_100021621
292 Ga0070713_100026130
293 Ga0070713_100032611
294 Ga0070710_10004744
295 Ga0070711_100019811
296 Ga0070711_100044141
297 Ga0070705_100000759
298 Ga0070708_100000880
299 Ga0070708_100022128
300 Ga0070708_100028868
301 Ga0070681_10002339
302 Ga0070681_10057376
303 Ga0070681_10120539
304 Ga0070685_10000311
305 Ga0070706_100001099
306 Ga0070706_100033620
307 Ga0070706_100167084
308 Ga0070707_100007958
309 Ga0070707_100014060
310 Ga0070698_100000286
311 Ga0070699_100009663
312 Ga0070679_100006351
313 Ga0070679_100060784
314 Ga0070684_100008611
315 Ga0070684_100020822
316 Ga0070697_100001242
317 Ga0070697_100002815
318 Ga0068853_100000296
319 Ga0070672_100002278
320 Ga0070686_100001037
321 Ga0070693_100013481
322 Ga0068855_100006204
323 Ga0068855_100015702
324 Ga0070664_100009270
325 Ga0068857_100001318
326 Ga0068854_100000143
327 Ga0068856_100015404
328 Ga0068856_100015464
329 Ga0068856_100070641
330 Ga0068852_100007487
331 Ga0068859_100000252
332 Ga0068864_100002552
333 Ga0068861_100000024
334 Ga0068870_10000013
335 Ga0068863_100000411
336 Ga0068860_100018874
337 Ga0081540_1003984
338 Ga0070717_10003453
339 Ga0070716_100004620
340 Ga0070716_100126769
341 Ga0070712_100000818
342 Ga0070712_100001925
343 Ga0070712_100050087
344 Ga0070712_100069427
345 Ga0070712_100114224
346 Ga0068865_100000729
347 Ga0075436_100011263
348 Ga0075436_100016659
349 Ga0075436_100044455
350 Ga0097620_100000252
351 Ga0075435_100014839
352 Ga0099794_10021616
353 Ga0099794_10028945
354 Ga0099794_10029462
355 Ga0105240_10002003
356 Ga0105240_10029474
357 Ga0105240_10098271
358 Ga0105245_10000469
359 Ga0105245_10034266
360 Ga0105241_10076825
361 Ga0105248_10000002
362 Ga0105248_10064951
363 Ga0105237_10000433
364 Ga0105237_10079443
365 Ga0105238_10021721
366 Ga0105238_10026327
367 Ga0099796_10006382
368 Ga0105239_10000837
369 Ga0105246_10000153
370 Ga0157373_10013297
371 Ga0157373_10030555
372 Ga0157371_10000442
373 Ga0157370_10005398
374 Ga0157370_10016653
375 Ga0157370_10031495
376 Ga0157370_10055479
377 Ga0157369_10000633
378 Ga0157369_10014460
379 Ga0157369_10026099
380 Ga0157369_10081349
381 Ga0157369_10111296
382 Ga0157374_10079051
383 Ga0157378_10000071
384 Ga0157378_10010818
385 Ga0157372_10000952
386 Ga0157372_10060376
387 Ga0157372_10119284
388 Ga0157375_10022764
389 Ga0163163_10008619
390 Ga0163163_10137775
391 Ga0157377_10000209
392 Ga0157376_10000781
393 Ga0157376_10013146
394 Ga0213872_10008600
395 Ga0213872_10011469
396 Ga0213872_10021343
397 Ga0213876_10007212
398 Ga0207697_10000172
399 Ga0207682_10009945
400 Ga0207692_10004131
401 Ga0207710_10011326
402 Ga0207647_10000658
403 Ga0207699_10043195
404 Ga0207699_10074051
405 Ga0207645_10000005
406 Ga0207705_10000024
407 Ga0207705_10012773
408 Ga0207684_10022120
409 Ga0207684_10028711
410 Ga0207684_10199098
411 Ga0207654_10015753
412 Ga0207707_10018106
413 Ga0207695_10001495
414 Ga0207695_10005955
415 Ga0207693_10000020
416 Ga0207693_10035743
417 Ga0207693_10108844
418 Ga0207663_10026309
419 Ga0207657_10000024
420 Ga0207657_10008427
421 Ga0207657_10015009
422 Ga0207652_10053087
423 Ga0207646_10033774
424 Ga0207694_10010152
425 Ga0207650_10000402
426 Ga0207659_10000174
427 Ga0207700_10008865
428 Ga0207700_10020688
429 Ga0207700_10097855
430 Ga0207664_10028865
431 Ga0207664_10108818
432 Ga0207690_10010507
433 Ga0207706_10000063
434 Ga0207669_10002196
435 Ga0207704_10012601
436 Ga0207665_10021445
437 Ga0207665_10040465
438 Ga0207711_10000008
439 Ga0207711_10000045
440 Ga0207689_10000022
441 Ga0207679_10000301
442 Ga0207667_10000199
443 Ga0207667_10002260
444 Ga0207640_10000023
445 Ga0207677_10001311
446 Ga0207703_10001780
447 Ga0207639_10000016
448 Ga0207702_10001663
449 Ga0207702_10023572
450 Ga0207702_10135311
451 Ga0207641_10206192
452 Ga0207676_10113401
453 Ga0207676_10167653
454 Ga0207674_10000787
455 Ga0207674_10043785
456 Ga0207674_10163079
457 Ga0207675_100000027
458 Ga0207683_10167678
459 Ga0207698_10014201
460 Ga0207698_10020235
461 Ga0209588_1001273
462 Ga0268266_10000915
463 Ga0268264_10000409
464 Ga0265338_10001393
465 Ga0265762_1001069
466 Ga0265760_10004382
467 Ga0265760_10004507
468 Ga0265330_10000625
469 Ga0265325_10002729
470 Ga0265325_10022162
471 Ga0265339_10000331
472 Ga0265339_10000904
473 Ga0265316_10002941
474 Ga0265316_10005414
475 Ga0265316_10033698
476 Ga0265313_10000434
477 Ga0265314_10001559
478 Ga0265314_10012989
479 Ga0265342_10005025
480 Ga0265342_10018214
481 Ga0265342_10025971
482 Ga0316212_1003686
483 Ga0373954_0008479
484 Ga0373956_0036915
485 Ga0373943_0010361
486 Ga0373924_0025917
487 Ga0373935_0007473
488 Ga0373927_0000179
489 Ga0373933_0001010
490 Ga0373947_0002959
491 Ga0373925_0000314
492 Ga0373925_0005854
493 Ga0436365_0521032
494 Ga0436360_0528088
495 Ga0436361_0132798
496 Ga0436361_0278206
497 Ga0436361_0365775
498 Ga0436361_0487458
499 Ga0436363_0178994
500 Ga0495592_0017002
501 Ga0495653_0032204
502 Ga0495580_0009382
503 Ga0495580_0019048
504 Ga0495580_0022071
505 Ga0495580_0026948
506 Ga0495582_0003744
507 Ga0495628_0060098
508 Ga0495630_0110335
509 Ga0495587_0005213
510 Ga0495635_0030221
511 Ga0495635_0034533
512 Ga0495623_0015834
513 Ga0495623_0027618
514 Ga0495646_0035789
515 Ga0495613_0015335
516 Ga0495613_0089412
517 Ga0495604_0003611
518 Ga0495604_0009550
519 Ga0495604_0019263
520 Ga0495680_0003575
521 Ga0495684_0086042
522 Ga0495602_0001481
523 Ga0496101_0022685
524 Ga0496102_0174368
525 Ga0496104_0003076
526 Ga0496104_0107851
527 Ga0496115_0080924
528 Ga0496126_0000616
529 nmdc:mga0rr50_17680_c1
530 nmdc:mga08x19_15390_c1
531 nmdc:mga08x19_35942_c1
532 nmdc:mga08x19_446_c1
533 Ga0495601_0001620
534 Ga0500595_008126

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06762

LMF1

Lipase maturation factor

146

388

0.89

PF06762

LMF1

Lipase maturation factor

362

546

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zrx-assembly1.cif.gz_A crystal structure of a putative alpha-l-fucosidase (bacova_04357) from bacteroides ovatus atcc 8483 at 1.59 a resolution 0.4911 369 401
4qtn-assembly1.cif.gz_B crystal structure of the vitamin b3 transporter pnuc 0.2376 67 297
7xw7-assembly1.cif.gz_R tshr-k1-70 complex 0.2312 95 369
7t9n-assembly1.cif.gz_R m22 agonist autoantibody bound to human thyrotropin receptor in complex with minigs399 (composite structure) 0.2269 95 368
7utz-assembly1.cif.gz_R human thyrotropin analog tr1402 bound to human thyrotropin receptor in complex with minigs399 (composite structure) 0.2254 93 369
ID Description Score Start End Superfamily
af_F1QLH3_285_412_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.6457 366 388 2.60.120.260
2jdaA00 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.5809 370 389 2.60.120.260
af_Q4E5C0_1_157_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.4956 181 304 1.20.120.550
af_Q4E5C0_1_157_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.4221 181 304 1.20.120.550
af_Q6PI62_22_363_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2377 96 359 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A2V8X2T5-F1-model_v4 Membrane protein 0.9757 381 507 GO:0016020
GO:0051604
AF-A0A535II81-F1-model_v4 Lipase maturation factor family protein 0.9714 33 217 GO:0016020
GO:0051604
AF-A0A534PW93-F1-model_v4 Lipase maturation factor family protein 0.9688 30 507 GO:0016020
GO:0051604
AF-A0A383DUZ5-F1-model_v4 Lipase maturation factor family protein 0.9645 33 165 GO:0005789
GO:0051604
AF-A0A3D4B8Q5-F1-model_v4 Membrane protein 0.9606 30 203 GO:0016020
GO:0051604

Map