F374597

General Info

Members Datasets Scaffolds Average Seq Length
267 183 534 296

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100002933|Ga0070706_10000293312
Length 336
Sequence VRGRGGDPGPSPTLPLSPSPALRRVAETADSYNPVQMYLGSILVVGGGTMGRGIAALCALSGCSTRIYEADESARRSVRSAIESSWKRGMEKGRLAPDAAAQAAQRLEVIDHLEFPDDCGFVLEAVPEQLELKQQLFSEIDRGAPAAAILASNTSSLSIASIARSTGRPDRVIGIHFFNPVAVMLLVEIVVGPKTSPETESRATAFVAALGKQAVRVRDSPGFATSRLGLALGLEAMRMVEEGVASAADIDRAMELGYGHRMGPLKTSDLVGLDVRLAIAETLARELDPVRFRPPEQLKRMVAAGRTGKKSGRGFYRWEGETPIAAPEETAEERKT

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
110 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
115 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
116 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
119 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
143 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
168 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
179 2643221647 Streptomyces sp. Root369 Isolate Unclassified
180 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
181 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
182 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
183 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.75
Metatranscriptomes 0
Isolates 2.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.62
Nodule 0.37
Rhizoplane 5.99
Rhizosphere 89.51
Stem 0
Stem Tuber 0
Unclassified 2.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100002933 3300005467 Bacteria 16966
2 rootL2_10203254 3300003322 Bacteria 1813
3 Ga0070690_100000249 3300005330 Bacteria 27854
4 Ga0070670_100045871 3300005331 Bacteria 3757
5 Ga0070666_10001562 3300005335 Bacteria 13902
6 Ga0070666_10007228 3300005335 Bacteria 6846
7 Ga0068868_100021653 3300005338 Bacteria 4842
8 Ga0070689_100023651 3300005340 Bacteria 4602
9 Ga0070689_100122366 3300005340 Bacteria 2079
10 Ga0070661_100200914 3300005344 Bacteria 1523
11 Ga0070692_10017196 3300005345 Bacteria 3453
12 Ga0070668_100163573 3300005347 Bacteria 1807
13 Ga0070669_100120557 3300005353 Bacteria 2000
14 Ga0070675_100295794 3300005354 Bacteria 1425
15 Ga0070671_100011385 3300005355 Bacteria 7150
16 Ga0070673_100007541 3300005364 Bacteria 7190
17 Ga0070688_100075911 3300005365 Bacteria 2162
18 Ga0070667_100000792 3300005367 Bacteria 29646
19 Ga0070703_10018379 3300005406 Bacteria 2021
20 Ga0070709_10001350 3300005434 Bacteria 13384
21 Ga0070714_100493360 3300005435 Bacteria 1167
22 Ga0070701_10062585 3300005438 Bacteria 1966
23 Ga0070701_10173771 3300005438 Bacteria 1256
24 Ga0070711_100000169 3300005439 Bacteria 34887
25 Ga0070700_100149743 3300005441 Bacteria 1595
26 Ga0070694_100000050 3300005444 Bacteria 54373
27 Ga0070694_100135240 3300005444 Bacteria 1785
28 Ga0070708_100002406 3300005445 Bacteria 14507
29 Ga0070708_100007464 3300005445 Bacteria 8756
30 Ga0070708_100100280 3300005445 Bacteria 2650
31 Ga0070708_100249819 3300005445 Bacteria 1666
32 Ga0070678_100005766 3300005456 Bacteria 7202
33 Ga0070678_100281647 3300005456 Bacteria 1406
34 Ga0068867_100052263 3300005459 Bacteria 3015
35 Ga0070706_100004321 3300005467 Bacteria 13760
36 Ga0070706_100241469 3300005467 Bacteria 1687
37 Ga0070698_100001801 3300005471 Bacteria 23859
38 Ga0070698_100080791 3300005471 Bacteria 3246
39 Ga0070699_100053192 3300005518 Bacteria 3505
40 Ga0070699_100192237 3300005518 Bacteria 1813
41 Ga0070697_100000432 3300005536 Bacteria 32164
42 Ga0070672_100002778 3300005543 Bacteria 11219
43 Ga0070672_100040495 3300005543 Bacteria 3575
44 Ga0070672_100088520 3300005543 Bacteria 2493
45 Ga0070695_100003077 3300005545 Bacteria 9710
46 Ga0070665_100010881 3300005548 Bacteria 9203
47 Ga0070665_100050257 3300005548 Bacteria 4184
48 Ga0070665_100063454 3300005548 Bacteria 3704
49 Ga0070704_100151518 3300005549 Bacteria 1823
50 Ga0068856_100001171 3300005614 Bacteria 27588
51 Ga0068856_100310927 3300005614 Bacteria 1593
52 Ga0070702_100003393 3300005615 Bacteria 7120
53 Ga0068859_100012481 3300005617 Bacteria 8546
54 Ga0068859_100370589 3300005617 Bacteria 1527
55 Ga0068859_100373932 3300005617 Bacteria 1520
56 Ga0068864_100030912 3300005618 Bacteria 4540
57 Ga0068864_100040341 3300005618 Bacteria 3994
58 Ga0068864_100087900 3300005618 Bacteria 2737
59 Ga0068861_100327833 3300005719 Bacteria 1335
60 Ga0068870_10009500 3300005840 Bacteria 4429
61 Ga0068863_100003238 3300005841 Bacteria 16106
62 Ga0068863_100013826 3300005841 Bacteria 7780
63 Ga0068863_100154764 3300005841 Bacteria 2195
64 Ga0068863_100184225 3300005841 Bacteria 2005
65 Ga0068858_100003348 3300005842 Bacteria 15953
66 Ga0068858_100306514 3300005842 Bacteria 1516
67 Ga0068860_100003944 3300005843 Bacteria 15243
68 Ga0068860_100006086 3300005843 Bacteria 12140
69 Ga0068862_100022241 3300005844 Bacteria 5303
70 Ga0081540_1000116 3300005983 Bacteria 84152
71 Ga0075365_10034907 3300006038 Bacteria 3251
72 Ga0075368_10003238 3300006042 Bacteria 5419
73 Ga0070716_100278784 3300006173 Bacteria 1153
74 Ga0075367_10000199 3300006178 Bacteria 19886
75 Ga0097621_100051113 3300006237 Bacteria 3363
76 Ga0068871_100135389 3300006358 Bacteria 2092
77 Ga0075433_10000364 3300006852 Bacteria 28523
78 Ga0075433_10010196 3300006852 Bacteria 7537
79 Ga0075433_10046864 3300006852 Bacteria 3760
80 Ga0075434_100006548 3300006871 Bacteria 10682
81 Ga0075434_100034035 3300006871 Bacteria 5030
82 Ga0075434_100043197 3300006871 Bacteria 4470
83 Ga0075434_100105821 3300006871 Unclassified 2823
84 Ga0068865_100010996 3300006881 Bacteria 5649
85 Ga0075436_100005953 3300006914 Bacteria 8377
86 Ga0097620_100012480 3300006931 Bacteria 8546
87 Ga0097620_100370577 3300006931 Bacteria 1527
88 Ga0097620_100373937 3300006931 Bacteria 1520
89 Ga0099826_10080803 3300006948 Bacteria 2025
90 Ga0075435_100009334 3300007076 Bacteria 7095
91 Ga0075435_100095083 3300007076 Bacteria 2464
92 Ga0075435_100098751 3300007076 Unclassified 2417
93 Ga0075435_100204191 3300007076 Bacteria 1675
94 Ga0075435_100368353 3300007076 Bacteria 1233
95 Ga0111539_10043461 3300009094 Bacteria 5386
96 Ga0111539_10696548 3300009094 Bacteria 1183
97 Ga0105247_10062246 3300009101 Bacteria 2315
98 Ga0114129_10003167 3300009147 Bacteria 23082
99 Ga0114129_10009280 3300009147 Bacteria 14029
100 Ga0114129_10009834 3300009147 Bacteria 13639
101 Ga0105242_10816593 3300009176 Bacteria 924
102 Ga0105248_10000909 3300009177 Bacteria 33023
103 Ga0105248_10075695 3300009177 Bacteria 3783
104 Ga0105249_10219005 3300009553 Bacteria 1872
105 Ga0157378_10016697 3300013297 Bacteria 6432
106 Ga0157378_10142968 3300013297 Bacteria 2223
107 Ga0163162_10088043 3300013306 Bacteria 3185
108 Ga0157375_10017957 3300013308 Bacteria 6403
109 Ga0157375_10042468 3300013308 Bacteria 4401
110 Ga0157375_10353127 3300013308 Bacteria 1636
111 Ga0163163_10018642 3300014325 Bacteria 6501
112 Ga0163163_10349829 3300014325 Bacteria 1534
113 Ga0157380_10008360 3300014326 Bacteria 7381
114 Ga0157376_10008032 3300014969 Bacteria 7579
115 Ga0157376_10066621 3300014969 Bacteria 3044
116 Ga0157376_10212028 3300014969 Bacteria 1789
117 Ga0163161_10189712 3300017792 Bacteria 1579
118 Ga0207653_10029593 3300025885 Bacteria 1764
119 Ga0207710_10033016 3300025900 Bacteria 2269
120 Ga0207680_10003028 3300025903 Bacteria 7881
121 Ga0207643_10001301 3300025908 Bacteria 14539
122 Ga0207684_10000953 3300025910 Bacteria 32600
123 Ga0207684_10002154 3300025910 Bacteria 20188
124 Ga0207684_10024619 3300025910 Bacteria 5132
125 Ga0207684_10060805 3300025910 Bacteria 3208
126 Ga0207684_10343527 3300025910 Bacteria 1285
127 Ga0207663_10000120 3300025916 Bacteria 38145
128 Ga0207646_10001876 3300025922 Bacteria 25349
129 Ga0207646_10062997 3300025922 Bacteria 3310
130 Ga0207646_10087180 3300025922 Bacteria 2793
131 Ga0207681_10084055 3300025923 Bacteria 2255
132 Ga0207650_10020762 3300025925 Bacteria 4637
133 Ga0207650_10172991 3300025925 Bacteria 1717
134 Ga0207659_10176730 3300025926 Bacteria 1688
135 Ga0207664_10433615 3300025929 Bacteria 1172
136 Ga0207706_10016952 3300025933 Bacteria 6571
137 Ga0207704_10006944 3300025938 Bacteria 5313
138 Ga0207665_10051845 3300025939 Bacteria 2763
139 Ga0207691_10000219 3300025940 Bacteria 55457
140 Ga0207691_10116168 3300025940 Bacteria 2375
141 Ga0207711_10001446 3300025941 Bacteria 22203
142 Ga0207679_10126736 3300025945 Bacteria 2041
143 Ga0207651_10193426 3300025960 Bacteria 1624
144 Ga0207668_10113012 3300025972 Bacteria 2041
145 Ga0207668_10342600 3300025972 Bacteria 1247
146 Ga0207640_10049861 3300025981 Bacteria 2713
147 Ga0207658_10016783 3300025986 Bacteria 5038
148 Ga0207703_10006207 3300026035 Bacteria 9564
149 Ga0207703_10187171 3300026035 Bacteria 1831
150 Ga0207678_10020310 3300026067 Bacteria 5828
151 Ga0207678_10037209 3300026067 Bacteria 4234
152 Ga0207708_10015760 3300026075 Bacteria 5672
153 Ga0207702_10099360 3300026078 Bacteria 2565
154 Ga0207641_10012139 3300026088 Bacteria 7070
155 Ga0207641_10046930 3300026088 Bacteria 3641
156 Ga0207641_10158247 3300026088 Bacteria 2057
157 Ga0207641_10472619 3300026088 Bacteria 1214
158 Ga0207648_10012727 3300026089 Bacteria 7862
159 Ga0207648_10024354 3300026089 Bacteria 5405
160 Ga0207676_10184683 3300026095 Bacteria 1829
161 Ga0207676_10494049 3300026095 Bacteria 1161
162 Ga0207675_100331294 3300026118 Bacteria 1488
163 Ga0207683_10003394 3300026121 Bacteria 13876
164 Ga0207698_10420288 3300026142 Bacteria 1283
165 Ga0209999_1004646 3300027543 Bacteria 2464
166 Ga0209982_1003047 3300027552 Bacteria 2371
167 Ga0209970_1000420 3300027614 Bacteria 7190
168 Ga0209983_1000986 3300027665 Bacteria 6283
169 Ga0209971_1002276 3300027682 Bacteria 4642
170 Ga0209966_1025811 3300027695 Bacteria 1168
171 Ga0209998_10000808 3300027717 Bacteria 8063
172 Ga0209813_10002202 3300027866 Bacteria 4450
173 Ga0209974_10001637 3300027876 Bacteria 8106
174 Ga0268266_10081480 3300028379 Bacteria 2822
175 Ga0268265_10020999 3300028380 Bacteria 4566
176 Ga0268265_10185952 3300028380 Bacteria 1789
177 Ga0268264_10005986 3300028381 Bacteria 10300
178 Ga0265330_10041888 3300031235 Bacteria 2030
179 Ga0265331_10040926 3300031250 Bacteria 2253
180 Ga0265342_10054147 3300031712 Bacteria 2385
181 Ga0307411_10022888 3300032005 Bacteria 3689
182 Ga0373956_0064929 3300035119 Bacteria 1658
183 Ga0373962_0066201 3300035242 Bacteria 1071
184 Ga0373937_0047601 3300036401 Bacteria 3924
185 Ga0395900_0108150 3300037418 Bacteria 2857
186 Ga0395900_0554695 3300037418 Bacteria 1093
187 Ga0395898_0062726 3300037466 Bacteria 3609
188 Ga0395901_0140199 3300038443 Bacteria 2541
189 Ga0436365_1622724 3300039437 Bacteria 2269
190 Ga0439439_0025410 3300041406 Bacteria 1490
191 Ga0439448_0000237 3300042005 Bacteria 11732
192 Ga0450903_000020 3300042138 Bacteria 31114
193 Ga0451577_0086435 3300042876 Bacteria 2798
194 Ga0495629_0064424 3300046459 Bacteria 2559
195 Ga0495580_0000526 3300046472 Bacteria 32324
196 Ga0495580_0017332 3300046472 Bacteria 5388
197 Ga0495580_0061439 3300046472 Bacteria 2638
198 Ga0495580_0131361 3300046472 Bacteria 1737
199 Ga0495640_0290212 3300046533 Bacteria 1017
200 Ga0495586_0202473 3300046535 Bacteria 1125
201 Ga0495625_0205993 3300046660 Bacteria 1295
202 Ga0495635_0070817 3300046663 Bacteria 2390
203 Ga0495657_0244419 3300046675 Bacteria 1082
204 Ga0495658_0008125 3300046683 Bacteria 5196
205 Ga0495613_0276513 3300046689 Bacteria 1167
206 Ga0495674_0219504 3300047319 Bacteria 1572
207 Ga0495679_077451 3300047446 Bacteria 949
208 Ga0495684_0026305 3300047471 Bacteria 4471
209 Ga0495684_0191466 3300047471 Bacteria 1512
210 Ga0495686_0059622 3300047472 Bacteria 2375
211 Ga0496100_0213670 3300048903 Bacteria 1412
212 Ga0496101_0024093 3300048904 Bacteria 4210
213 Ga0496102_0000506 3300048905 Bacteria 42785
214 Ga0496102_0026213 3300048905 Bacteria 5196
215 Ga0496102_0095997 3300048905 Bacteria 2748
216 Ga0496103_0004792 3300048906 Bacteria 8178
217 Ga0496104_0035844 3300048907 Bacteria 4634
218 Ga0496105_0299316 3300048908 Bacteria 1293
219 Ga0496106_0000870 3300048909 Bacteria 21979
220 Ga0496106_0049858 3300048909 Bacteria 3155
221 Ga0496107_0077238 3300048910 Bacteria 2425
222 Ga0496108_0056491 3300048911 Bacteria 3298
223 Ga0496110_0093169 3300048913 Bacteria 2696
224 Ga0496111_0050556 3300048914 Bacteria 2999
225 Ga0496112_0203220 3300048915 Bacteria 1940
226 Ga0496114_0269203 3300048917 Bacteria 1501
227 Ga0501032_0289952 3300049569 Bacteria 1059
228 Ga0501039_0165523 3300049575 Bacteria 1739
229 Ga0501040_0245431 3300049576 Bacteria 1277
230 Ga0501041_0130696 3300049577 Bacteria 1564
231 Ga0501047_0417337 3300049581 Bacteria 1174
232 Ga0501067_0043033 3300049583 Bacteria 2508
233 Ga0501071_0083773 3300049587 Bacteria 2336
234 Ga0501074_0358506 3300049590 Bacteria 1035
235 Ga0501075_0014413 3300049591 Bacteria 5664
236 Ga0501076_0098484 3300049592 Bacteria 2356
237 Ga0501079_0077568 3300049741 Bacteria 2570
238 Ga0501080_0204870 3300049742 Bacteria 1810
239 Ga0501080_0479622 3300049742 Bacteria 1113
240 nmdc:mga06z11_7942_c1 3300050494 Bacteria 4395
241 nmdc:mga04h51_7506_c1 3300050495 Bacteria 2881
242 nmdc:mga05p37_2452_c1 3300050507 Bacteria 21559
243 nmdc:mga05p37_257222_c1 3300050507 Bacteria 2092
244 nmdc:mga05p37_287756_c1 3300050507 Unclassified 1957
245 nmdc:mga05p37_7073_c1 3300050507 Bacteria 13230
246 nmdc:mga08y16_601622_c1 3300050511 Bacteria 1108
247 nmdc:mga0n895_167874_c1 3300050512 Unclassified 2226
248 nmdc:mga0n895_2302_c1 3300050512 Bacteria 14852
249 nmdc:mga0n895_39036_c1 3300050512 Bacteria 4603
250 nmdc:mga0n895_9949_c1 3300050512 Bacteria 8368
251 nmdc:mga0rr50_10021_c1 3300050513 Bacteria 5995
252 nmdc:mga0rr50_44907_c1 3300050513 Unclassified 3244
253 nmdc:mga0rr50_67090_c1 3300050513 Bacteria 2724
254 nmdc:mga0a205_156144_c1 3300050515 Bacteria 2180
255 nmdc:mga0a205_17615_c1 3300050515 Unclassified 4429
256 nmdc:mga0a205_17865_c1 3300050515 Bacteria 6656
257 nmdc:mga0a205_243_c1 3300050515 Bacteria 38798
258 Ga0495595_0012842 3300053084 Bacteria 3531
259 Ga0500600_0217313 3300053149 Bacteria 885
260 Ga0501084_0014110 3300054114 Bacteria 6617
261 Ga0530510_0026858 3300061734 Bacteria 4124
262 2585312122 2582581314 Bacteria 11452267
263 2644267216 2643221647 Bacteria 10741251
264 2954390098 2954380949 Bacteria 10050426
265 2954692507 2954691527 Bacteria 10720516
266 2954707576 2954701450 Bacteria 10834262
267 8047717954 8047710418 Bacteria 11023148
268 Ga0070706_100002933
269 rootL2_10203254
270 Ga0070690_100000249
271 Ga0070670_100045871
272 Ga0070666_10001562
273 Ga0070666_10007228
274 Ga0068868_100021653
275 Ga0070689_100023651
276 Ga0070689_100122366
277 Ga0070661_100200914
278 Ga0070692_10017196
279 Ga0070668_100163573
280 Ga0070669_100120557
281 Ga0070675_100295794
282 Ga0070671_100011385
283 Ga0070673_100007541
284 Ga0070688_100075911
285 Ga0070667_100000792
286 Ga0070703_10018379
287 Ga0070709_10001350
288 Ga0070714_100493360
289 Ga0070701_10062585
290 Ga0070701_10173771
291 Ga0070711_100000169
292 Ga0070700_100149743
293 Ga0070694_100000050
294 Ga0070694_100135240
295 Ga0070708_100002406
296 Ga0070708_100007464
297 Ga0070708_100100280
298 Ga0070708_100249819
299 Ga0070678_100005766
300 Ga0070678_100281647
301 Ga0068867_100052263
302 Ga0070706_100004321
303 Ga0070706_100241469
304 Ga0070698_100001801
305 Ga0070698_100080791
306 Ga0070699_100053192
307 Ga0070699_100192237
308 Ga0070697_100000432
309 Ga0070672_100002778
310 Ga0070672_100040495
311 Ga0070672_100088520
312 Ga0070695_100003077
313 Ga0070665_100010881
314 Ga0070665_100050257
315 Ga0070665_100063454
316 Ga0070704_100151518
317 Ga0068856_100001171
318 Ga0068856_100310927
319 Ga0070702_100003393
320 Ga0068859_100012481
321 Ga0068859_100370589
322 Ga0068859_100373932
323 Ga0068864_100030912
324 Ga0068864_100040341
325 Ga0068864_100087900
326 Ga0068861_100327833
327 Ga0068870_10009500
328 Ga0068863_100003238
329 Ga0068863_100013826
330 Ga0068863_100154764
331 Ga0068863_100184225
332 Ga0068858_100003348
333 Ga0068858_100306514
334 Ga0068860_100003944
335 Ga0068860_100006086
336 Ga0068862_100022241
337 Ga0081540_1000116
338 Ga0075365_10034907
339 Ga0075368_10003238
340 Ga0070716_100278784
341 Ga0075367_10000199
342 Ga0097621_100051113
343 Ga0068871_100135389
344 Ga0075433_10000364
345 Ga0075433_10010196
346 Ga0075433_10046864
347 Ga0075434_100006548
348 Ga0075434_100034035
349 Ga0075434_100043197
350 Ga0075434_100105821
351 Ga0068865_100010996
352 Ga0075436_100005953
353 Ga0097620_100012480
354 Ga0097620_100370577
355 Ga0097620_100373937
356 Ga0099826_10080803
357 Ga0075435_100009334
358 Ga0075435_100095083
359 Ga0075435_100098751
360 Ga0075435_100204191
361 Ga0075435_100368353
362 Ga0111539_10043461
363 Ga0111539_10696548
364 Ga0105247_10062246
365 Ga0114129_10003167
366 Ga0114129_10009280
367 Ga0114129_10009834
368 Ga0105242_10816593
369 Ga0105248_10000909
370 Ga0105248_10075695
371 Ga0105249_10219005
372 Ga0157378_10016697
373 Ga0157378_10142968
374 Ga0163162_10088043
375 Ga0157375_10017957
376 Ga0157375_10042468
377 Ga0157375_10353127
378 Ga0163163_10018642
379 Ga0163163_10349829
380 Ga0157380_10008360
381 Ga0157376_10008032
382 Ga0157376_10066621
383 Ga0157376_10212028
384 Ga0163161_10189712
385 Ga0207653_10029593
386 Ga0207710_10033016
387 Ga0207680_10003028
388 Ga0207643_10001301
389 Ga0207684_10000953
390 Ga0207684_10002154
391 Ga0207684_10024619
392 Ga0207684_10060805
393 Ga0207684_10343527
394 Ga0207663_10000120
395 Ga0207646_10001876
396 Ga0207646_10062997
397 Ga0207646_10087180
398 Ga0207681_10084055
399 Ga0207650_10020762
400 Ga0207650_10172991
401 Ga0207659_10176730
402 Ga0207664_10433615
403 Ga0207706_10016952
404 Ga0207704_10006944
405 Ga0207665_10051845
406 Ga0207691_10000219
407 Ga0207691_10116168
408 Ga0207711_10001446
409 Ga0207679_10126736
410 Ga0207651_10193426
411 Ga0207668_10113012
412 Ga0207668_10342600
413 Ga0207640_10049861
414 Ga0207658_10016783
415 Ga0207703_10006207
416 Ga0207703_10187171
417 Ga0207678_10020310
418 Ga0207678_10037209
419 Ga0207708_10015760
420 Ga0207702_10099360
421 Ga0207641_10012139
422 Ga0207641_10046930
423 Ga0207641_10158247
424 Ga0207641_10472619
425 Ga0207648_10012727
426 Ga0207648_10024354
427 Ga0207676_10184683
428 Ga0207676_10494049
429 Ga0207675_100331294
430 Ga0207683_10003394
431 Ga0207698_10420288
432 Ga0209999_1004646
433 Ga0209982_1003047
434 Ga0209970_1000420
435 Ga0209983_1000986
436 Ga0209971_1002276
437 Ga0209966_1025811
438 Ga0209998_10000808
439 Ga0209813_10002202
440 Ga0209974_10001637
441 Ga0268266_10081480
442 Ga0268265_10020999
443 Ga0268265_10185952
444 Ga0268264_10005986
445 Ga0265330_10041888
446 Ga0265331_10040926
447 Ga0265342_10054147
448 Ga0307411_10022888
449 Ga0373956_0064929
450 Ga0373962_0066201
451 Ga0373937_0047601
452 Ga0395900_0108150
453 Ga0395900_0554695
454 Ga0395898_0062726
455 Ga0395901_0140199
456 Ga0436365_1622724
457 Ga0439439_0025410
458 Ga0439448_0000237
459 Ga0450903_000020
460 Ga0451577_0086435
461 Ga0495629_0064424
462 Ga0495580_0000526
463 Ga0495580_0017332
464 Ga0495580_0061439
465 Ga0495580_0131361
466 Ga0495640_0290212
467 Ga0495586_0202473
468 Ga0495625_0205993
469 Ga0495635_0070817
470 Ga0495657_0244419
471 Ga0495658_0008125
472 Ga0495613_0276513
473 Ga0495674_0219504
474 Ga0495679_077451
475 Ga0495684_0026305
476 Ga0495684_0191466
477 Ga0495686_0059622
478 Ga0496100_0213670
479 Ga0496101_0024093
480 Ga0496102_0000506
481 Ga0496102_0026213
482 Ga0496102_0095997
483 Ga0496103_0004792
484 Ga0496104_0035844
485 Ga0496105_0299316
486 Ga0496106_0000870
487 Ga0496106_0049858
488 Ga0496107_0077238
489 Ga0496108_0056491
490 Ga0496110_0093169
491 Ga0496111_0050556
492 Ga0496112_0203220
493 Ga0496114_0269203
494 Ga0501032_0289952
495 Ga0501039_0165523
496 Ga0501040_0245431
497 Ga0501041_0130696
498 Ga0501047_0417337
499 Ga0501067_0043033
500 Ga0501071_0083773
501 Ga0501074_0358506
502 Ga0501075_0014413
503 Ga0501076_0098484
504 Ga0501079_0077568
505 Ga0501080_0204870
506 Ga0501080_0479622
507 nmdc:mga06z11_7942_c1
508 nmdc:mga04h51_7506_c1
509 nmdc:mga05p37_2452_c1
510 nmdc:mga05p37_257222_c1
511 nmdc:mga05p37_287756_c1
512 nmdc:mga05p37_7073_c1
513 nmdc:mga08y16_601622_c1
514 nmdc:mga0n895_167874_c1
515 nmdc:mga0n895_2302_c1
516 nmdc:mga0n895_39036_c1
517 nmdc:mga0n895_9949_c1
518 nmdc:mga0rr50_10021_c1
519 nmdc:mga0rr50_44907_c1
520 nmdc:mga0rr50_67090_c1
521 nmdc:mga0a205_156144_c1
522 nmdc:mga0a205_17615_c1
523 nmdc:mga0a205_17865_c1
524 nmdc:mga0a205_243_c1
525 Ga0495595_0012842
526 Ga0500600_0217313
527 Ga0501084_0014110
528 Ga0530510_0026858
529 2585312122
530 2644267216
531 2954390098
532 2954692507
533 2954707576
534 8047717954

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

222

318

0.99

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

41

220

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8p84-assembly1.cif.gz_A x-ray structure of thermoanaerobacterales bacterium monoamine oxidase 1.003 11 38
3rp8-assembly1.cif.gz_A crystal structure of klebsiella pneumoniae r204q hpxo complexed with fad 0.9811 10 38
5nmw-assembly2.cif.gz_D crystal structure of the pyrrolizidine alkaloid n-oxygenase from zonocerus variegatus in complex with fad 0.9706 10 36
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.9616 10 38
2yg4-assembly1.cif.gz_A structure-based redesign of cofactor binding in putrescine oxidase: wild type bound to putrescine 0.9598 11 38
ID Description Score Start End Superfamily
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9894 10 38 3.50.50.60
6hrdD02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9843 183 266 1.10.1040.10
4kueB02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9774 183 266 1.10.1040.10
4kueA02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9773 183 266 1.10.1040.10
6acqA02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.977 183 266 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A0L8QFE2-F1-model_v4 deleted 0.9915 71 145
AF-A0A6B2UBF7-F1-model_v4 deleted 0.9864 72 161
AF-X1TD19-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9837 72 156 GO:0006631
GO:0016491
GO:0070403
AF-A0A7S2HKU4-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9822 80 181 GO:0006635
GO:0016829
GO:0016853
GO:0070403
AF-A0A6I2VRB6-F1-model_v4 3-hydroxybutyryl-CoA dehydrogenase 0.9814 73 155 GO:0006635
GO:0008691
GO:0070403

Map