F374570

General Info

Members Datasets Scaffolds Average Seq Length
267 190 534 309

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100000051|Ga0070714_10000005128
Length 317
Sequence MRVKILGSAAGGGFPQWNCACPNCRAVRAGTFRGKARLQTQVAIRADSNSWFLLGASPDLRAQIEATAELHPRQIQSQQEIRQSPIAGAVLANADVDHVLGLLLLRELQPLRVHATKSIRRILTEDNSMFAMLQRVPNQLSWTDFVPGTTFPLLTAAGEDSKLRCRALSLATHFPAYVSTQRQAALNAAESSLGFILESPTGKRLAYMPAVPQIDRALLKEFESADVLLFDGTFWSDDELARIQGSGSNAQTALQMGHVPVSSAEGSLAQLAQLTRPRKIYLHINNTNPMLDESGPEHRKVREAGWEIAEDGWQLEI

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
4 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
54 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
85 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
86 3300022734 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 Metagenome Rhizosphere
87 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
88 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
131 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
132 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
133 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
134 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
135 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
136 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
137 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
140 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
141 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
142 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
143 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
144 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
145 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
146 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
147 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
148 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
149 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
150 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
151 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
152 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
153 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
154 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
155 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
156 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
159 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
160 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
161 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
162 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
163 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
164 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
165 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
166 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
167 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
168 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
169 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
170 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
171 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
172 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
173 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
174 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
175 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
176 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
177 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
178 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
179 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
180 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
181 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
182 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
183 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
184 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
185 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
186 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
187 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
188 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
189 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.75
Metatranscriptomes 2.25
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.62
Rhizosphere 93.63
Stem 0
Stem Tuber 0
Unclassified 28.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100000051 3300005435 Bacteria 110289
2 MRS1b_contig_2684623 2162886011 Unclassified 1056
3 LJNas_1000026 3300000546 Bacteria 19576
4 JGI24743J22301_10001962 3300001991 Unclassified 2996
5 JGI25406J46586_10000023 3300003203 Bacteria 76640
6 Ga0065712_10105006 3300005290 Unclassified 1948
7 Ga0065715_10129730 3300005293 Unclassified 2029
8 Ga0070658_10004839 3300005327 Bacteria 10969
9 Ga0070676_10080158 3300005328 Unclassified 1978
10 Ga0070683_100006297 3300005329 Bacteria 9961
11 Ga0068869_100111751 3300005334 Unclassified 2079
12 Ga0070666_10257101 3300005335 Unclassified 1237
13 Ga0070660_100013766 3300005339 Bacteria 5818
14 Ga0070689_100049524 3300005340 Unclassified 3244
15 Ga0070687_100012218 3300005343 Unclassified 3784
16 Ga0070675_100006119 3300005354 Bacteria 9228
17 Ga0070671_100415797 3300005355 Unclassified 1151
18 Ga0070674_100031265 3300005356 Unclassified 3526
19 Ga0070688_100023201 3300005365 Unclassified 3647
20 Ga0070659_100002307 3300005366 Bacteria 13584
21 Ga0070709_10020526 3300005434 Bacteria 3833
22 Ga0070709_10035963 3300005434 Bacteria 3013
23 Ga0070709_10062993 3300005434 Bacteria 2366
24 Ga0070714_100065387 3300005435 Bacteria 3132
25 Ga0070714_100275684 3300005435 Unclassified 1561
26 Ga0070714_100318314 3300005435 Bacteria 1454
27 Ga0070714_100415201 3300005435 Bacteria 1274
28 Ga0070713_100008024 3300005436 Bacteria 7461
29 Ga0070713_100009701 3300005436 Bacteria 6913
30 Ga0070713_100052885 3300005436 Bacteria 3364
31 Ga0070713_100088025 3300005436 Unclassified 2665
32 Ga0070713_100231306 3300005436 Bacteria 1680
33 Ga0070710_10003713 3300005437 Bacteria 7216
34 Ga0070710_10143799 3300005437 Bacteria 1465
35 Ga0070711_100010084 3300005439 Bacteria 5837
36 Ga0070711_100222375 3300005439 Bacteria 1468
37 Ga0070711_100255256 3300005439 Bacteria 1377
38 Ga0070708_100002491 3300005445 Bacteria 14219
39 Ga0070708_100020869 3300005445 Bacteria 5530
40 Ga0070708_100078010 3300005445 Bacteria 2994
41 Ga0070663_100092186 3300005455 Unclassified 2246
42 Ga0070678_100244301 3300005456 Unclassified 1502
43 Ga0070662_100038806 3300005457 Unclassified 3384
44 Ga0070681_10062805 3300005458 Bacteria 3687
45 Ga0070681_10139270 3300005458 Bacteria 2356
46 Ga0068867_100027761 3300005459 Unclassified 4071
47 Ga0070685_10010732 3300005466 Unclassified 4769
48 Ga0070706_100000665 3300005467 Bacteria 39170
49 Ga0070706_100050526 3300005467 Bacteria 3837
50 Ga0070707_100011905 3300005468 Bacteria 8117
51 Ga0070707_100020372 3300005468 Bacteria 6255
52 Ga0070707_100246107 3300005468 Bacteria 1740
53 Ga0070707_100380795 3300005468 Bacteria 1371
54 Ga0070698_100001063 3300005471 Bacteria 30156
55 Ga0070698_100028715 3300005471 Bacteria 5775
56 Ga0070698_100047734 3300005471 Bacteria 4377
57 Ga0070698_100205231 3300005471 Bacteria 1906
58 Ga0070699_100002090 3300005518 Bacteria 18072
59 Ga0070699_100011081 3300005518 Bacteria 7795
60 Ga0070699_100385041 3300005518 Bacteria 1266
61 Ga0070697_100003665 3300005536 Bacteria 11811
62 Ga0070697_100242012 3300005536 Bacteria 1541
63 Ga0068853_100069948 3300005539 Unclassified 3054
64 Ga0070672_100169222 3300005543 Unclassified 1816
65 Ga0070686_100025801 3300005544 Unclassified 3539
66 Ga0068855_100042988 3300005563 Bacteria 5354
67 Ga0070664_100162537 3300005564 Unclassified 1976
68 Ga0068857_100106070 3300005577 Unclassified 2523
69 Ga0068856_100015643 3300005614 Bacteria 7334
70 Ga0068856_100122716 3300005614 Bacteria 2600
71 Ga0068856_100134836 3300005614 Unclassified 2474
72 Ga0068852_100177955 3300005616 Unclassified 1998
73 Ga0068859_100199916 3300005617 Unclassified 2083
74 Ga0068864_100037350 3300005618 Unclassified 4145
75 Ga0068866_10018727 3300005718 Unclassified 3137
76 Ga0068851_10020785 3300005834 Unclassified 3182
77 Ga0068863_100003491 3300005841 Bacteria 15513
78 Ga0068860_100062368 3300005843 Bacteria 3542
79 Ga0068860_100500914 3300005843 Unclassified 1212
80 Ga0081539_10000014 3300005985 Bacteria 411270
81 Ga0070717_10001528 3300006028 Bacteria 16038
82 Ga0070717_10008205 3300006028 Bacteria 7800
83 Ga0070717_10301751 3300006028 Bacteria 1424
84 Ga0070715_10035323 3300006163 Bacteria 2055
85 Ga0070716_100009053 3300006173 Bacteria 4955
86 Ga0070716_100028449 3300006173 Plasmid 3011
87 Ga0070712_100039085 3300006175 Bacteria 3246
88 Ga0070712_100116373 3300006175 Bacteria 2005
89 Ga0068865_100309848 3300006881 Unclassified 1266
90 Ga0097620_100199903 3300006931 Unclassified 2083
91 Ga0105240_10103517 3300009093 Bacteria 3459
92 Ga0111539_10503016 3300009094 Unclassified 1411
93 Ga0105245_10021174 3300009098 Bacteria 5701
94 Ga0105247_10001312 3300009101 Bacteria 18208
95 Ga0105241_10015574 3300009174 Bacteria 5572
96 Ga0105242_10056767 3300009176 Bacteria 3204
97 Ga0105237_10063832 3300009545 Unclassified 3680
98 Ga0105237_10111643 3300009545 Unclassified 2726
99 Ga0105238_10815523 3300009551 Unclassified 949
100 Ga0105249_10045882 3300009553 Unclassified 3976
101 Ga0105249_10190775 3300009553 Bacteria 2000
102 Ga0099796_10001106 3300010159 Bacteria 5175
103 Ga0099796_10063002 3300010159 Bacteria 1319
104 Ga0105239_10290255 3300010375 Unclassified 1842
105 Ga0105246_10078702 3300011119 Unclassified 2342
106 Ga0157373_10014216 3300013100 Bacteria 5837
107 Ga0157371_10274046 3300013102 Unclassified 1218
108 Ga0157369_10056947 3300013105 Unclassified 4218
109 Ga0157374_10006787 3300013296 Bacteria 9733
110 Ga0157378_10070301 3300013297 Bacteria 3142
111 Ga0163162_10029115 3300013306 Bacteria 5464
112 Ga0163162_10082435 3300013306 Unclassified 3288
113 Ga0157372_10112477 3300013307 Bacteria 3120
114 Ga0163163_10018078 3300014325 Bacteria 6588
115 Ga0163163_10020456 3300014325 Bacteria 6232
116 Ga0157380_10229139 3300014326 Unclassified 1667
117 Ga0157377_10008616 3300014745 Unclassified 4978
118 Ga0157379_10059899 3300014968 Unclassified 3404
119 Ga0157376_10013389 3300014969 Bacteria 6118
120 Ga0163161_10004446 3300017792 Bacteria 9772
121 Ga0206350_11609568 3300020080 Bacteria 1135
122 Ga0213876_10010317 3300021384 Bacteria 5016
123 Ga0224569_100549 3300022732 Unclassified 3220
124 Ga0224571_101467 3300022734 Unclassified 1477
125 Ga0224572_1008135 3300024225 Bacteria 1936
126 Ga0224572_1014054 3300024225 Unclassified 1529
127 Ga0207697_10007037 3300025315 Bacteria 5039
128 Ga0207656_10036360 3300025321 Unclassified 2066
129 Ga0207692_10004192 3300025898 Bacteria 5691
130 Ga0207710_10004810 3300025900 Bacteria 5863
131 Ga0207647_10002068 3300025904 Bacteria 15337
132 Ga0207699_10001312 3300025906 Bacteria 11824
133 Ga0207699_10023444 3300025906 Bacteria 3359
134 Ga0207645_10002335 3300025907 Bacteria 14986
135 Ga0207643_10000106 3300025908 Bacteria 56717
136 Ga0207684_10000229 3300025910 Bacteria 85591
137 Ga0207684_10021496 3300025910 Bacteria 5509
138 Ga0207684_10147684 3300025910 Bacteria 2022
139 Ga0207693_10042078 3300025915 Bacteria 3597
140 Ga0207693_10068786 3300025915 Bacteria 2772
141 Ga0207693_10134370 3300025915 Bacteria 1945
142 Ga0207663_10010234 3300025916 Bacteria 4983
143 Ga0207663_10178503 3300025916 Bacteria 1514
144 Ga0207663_10254501 3300025916 Bacteria 1294
145 Ga0207662_10030642 3300025918 Unclassified 3123
146 Ga0207657_10012179 3300025919 Bacteria 8499
147 Ga0207649_10001733 3300025920 Bacteria 12529
148 Ga0207646_10001298 3300025922 Bacteria 31112
149 Ga0207646_10001325 3300025922 Bacteria 30725
150 Ga0207646_10031459 3300025922 Bacteria 4804
151 Ga0207646_10210068 3300025922 Bacteria 1758
152 Ga0207650_10000042 3300025925 Bacteria 191592
153 Ga0207659_10030273 3300025926 Unclassified 3696
154 Ga0207700_10038305 3300025928 Bacteria 3479
155 Ga0207700_10331709 3300025928 Bacteria 1321
156 Ga0207664_10000029 3300025929 Bacteria 183815
157 Ga0207664_10228962 3300025929 Unclassified 1615
158 Ga0207644_10031566 3300025931 Unclassified 3691
159 Ga0207706_10001104 3300025933 Bacteria 27475
160 Ga0207670_10114100 3300025936 Unclassified 1952
161 Ga0207665_10013562 3300025939 Bacteria 5360
162 Ga0207665_10016248 3300025939 Unclassified 4887
163 Ga0207665_10040185 3300025939 Bacteria 3120
164 Ga0207665_10118374 3300025939 Bacteria 1869
165 Ga0207691_10011182 3300025940 Bacteria 8615
166 Ga0207689_10001477 3300025942 Bacteria 22494
167 Ga0207689_10076372 3300025942 Bacteria 2754
168 Ga0207661_10000160 3300025944 Bacteria 43294
169 Ga0207661_10074851 3300025944 Bacteria 2777
170 Ga0207679_10000050 3300025945 Bacteria 112411
171 Ga0207651_10008486 3300025960 Bacteria 5554
172 Ga0207640_10420644 3300025981 Unclassified 1093
173 Ga0207677_10047310 3300026023 Bacteria 2887
174 Ga0207639_10024217 3300026041 Unclassified 4390
175 Ga0207678_10000023 3300026067 Bacteria 126241
176 Ga0207702_10004380 3300026078 Bacteria 12583
177 Ga0207702_10243366 3300026078 Unclassified 1686
178 Ga0207641_10000059 3300026088 Bacteria 164728
179 Ga0207641_10089678 3300026088 Bacteria 2688
180 Ga0207648_10000041 3300026089 Bacteria 115866
181 Ga0207676_10000671 3300026095 Bacteria 27395
182 Ga0207674_10000047 3300026116 Bacteria 120929
183 Ga0207675_100031379 3300026118 Unclassified 4950
184 Ga0207683_10000017 3300026121 Bacteria 123119
185 Ga0268266_10002364 3300028379 Bacteria 20398
186 Ga0268265_10014630 3300028380 Bacteria 5349
187 Ga0268264_10007814 3300028381 Bacteria 8899
188 Ga0268264_10263153 3300028381 Bacteria 1608
189 Ga0265337_1006075 3300028556 Bacteria 4703
190 Ga0265326_10012393 3300028558 Unclassified 2508
191 Ga0265319_1000154 3300028563 Bacteria 51459
192 Ga0265334_10028626 3300028573 Unclassified 2237
193 Ga0265318_10010204 3300028577 Unclassified 4101
194 Ga0265336_10028360 3300028666 Bacteria 1750
195 Ga0265338_10003851 3300028800 Bacteria 20820
196 Ga0265338_10013713 3300028800 Bacteria 9115
197 Ga0265338_10030295 3300028800 Bacteria 5335
198 Ga0265338_10038299 3300028800 Bacteria 4546
199 Ga0265762_1000630 3300030760 Bacteria 6198
200 Ga0265762_1002993 3300030760 Bacteria 3021
201 Ga0265760_10002857 3300031090 Bacteria 5041
202 Ga0265760_10016156 3300031090 Bacteria 2141
203 Ga0265760_10022374 3300031090 Bacteria 1832
204 Ga0265325_10029213 3300031241 Bacteria 2964
205 Ga0265340_10056026 3300031247 Bacteria 1897
206 Ga0265339_10014302 3300031249 Bacteria 4786
207 Ga0265314_10092567 3300031711 Bacteria 1965
208 Ga0265342_10099437 3300031712 Bacteria 1659
209 Ga0265342_10111017 3300031712 Bacteria 1552
210 Ga0373926_0030369 3300035083 Bacteria 1903
211 Ga0373934_0035242 3300035086 Bacteria 1968
212 Ga0373923_0112814 3300035111 Bacteria 1208
213 Ga0373936_0004469 3300035113 Bacteria 5290
214 Ga0373957_0020777 3300035120 Bacteria 2324
215 Ga0373943_0000089 3300035170 Bacteria 33275
216 Ga0373935_0006016 3300035692 Bacteria 7206
217 Ga0373927_0007810 3300035695 Bacteria 7238
218 Ga0373933_0004780 3300035724 Bacteria 7402
219 Ga0373947_0001810 3300035725 Bacteria 13081
220 Ga0373937_0237597 3300036401 Bacteria 1716
221 Ga0373925_0001585 3300037068 Bacteria 19228
222 Ga0373925_0097750 3300037068 Bacteria 2252
223 Ga0373925_0418104 3300037068 Bacteria 1095
224 Ga0436365_0417223 3300039437 Bacteria 10871
225 Ga0466966_0099496 3300044684 Unclassified 1799
226 Ga0466963_0118338 3300044694 Bacteria 1822
227 Ga0495603_0067384 3300046455 Unclassified 2107
228 Ga0495653_0106673 3300046463 Bacteria 2020
229 Ga0495580_0001322 3300046472 Bacteria 21865
230 Ga0495580_0004068 3300046472 Bacteria 12342
231 Ga0495580_0083951 3300046472 Bacteria 2219
232 Ga0495582_0000161 3300046473 Bacteria 36312
233 Ga0495664_0086752 3300046477 Bacteria 1880
234 Ga0495630_0050054 3300046517 Unclassified 3126
235 Ga0495666_0014513 3300046526 Bacteria 3923
236 Ga0495665_0107203 3300046531 Bacteria 1466
237 Ga0495586_0188655 3300046535 Bacteria 1167
238 Ga0495622_0071090 3300046557 Bacteria 1606
239 Ga0495634_0015007 3300046642 Bacteria 5571
240 Ga0495635_0079524 3300046663 Bacteria 2244
241 Ga0495635_0199407 3300046663 Bacteria 1358
242 Ga0495658_0044874 3300046683 Bacteria 2478
243 Ga0495669_0079625 3300046684 Unclassified 1502
244 Ga0495613_0204593 3300046689 Bacteria 1390
245 Ga0495624_0087311 3300046690 Bacteria 1926
246 Ga0495670_0268633 3300046691 Bacteria 911
247 Ga0495674_0006047 3300047319 Bacteria 11621
248 Ga0495674_0047066 3300047319 Unclassified 3826
249 Ga0495674_0090075 3300047319 Bacteria 2622
250 Ga0495684_0033136 3300047471 Unclassified 3965
251 Ga0495614_0021572 3300048089 Unclassified 2781
252 Ga0496100_0093338 3300048903 Bacteria 2059
253 Ga0496101_0111433 3300048904 Bacteria 2060
254 Ga0496102_0046096 3300048905 Unclassified 3959
255 Ga0496103_0163339 3300048906 Unclassified 1429
256 Ga0496104_0240451 3300048907 Bacteria 1723
257 Ga0496104_0715729 3300048907 Unclassified 909
258 Ga0496108_0000248 3300048911 Bacteria 48227
259 Ga0496109_0000059 3300048912 Bacteria 118169
260 Ga0496111_0048095 3300048914 Unclassified 3072
261 Ga0496112_0000027 3300048915 Bacteria 139514
262 Ga0496112_0058569 3300048915 Bacteria 3794
263 Ga0496114_0096571 3300048917 Bacteria 2516
264 Ga0496115_0016437 3300048918 Bacteria 5636
265 Ga0496115_0190244 3300048918 Unclassified 1695
266 Ga0496115_0227988 3300048918 Unclassified 1537
267 nmdc:mga0rr50_12881_c1 3300050513 Bacteria 5422
268 Ga0070714_100000051
269 MRS1b_contig_2684623
270 LJNas_1000026
271 JGI24743J22301_10001962
272 JGI25406J46586_10000023
273 Ga0065712_10105006
274 Ga0065715_10129730
275 Ga0070658_10004839
276 Ga0070676_10080158
277 Ga0070683_100006297
278 Ga0068869_100111751
279 Ga0070666_10257101
280 Ga0070660_100013766
281 Ga0070689_100049524
282 Ga0070687_100012218
283 Ga0070675_100006119
284 Ga0070671_100415797
285 Ga0070674_100031265
286 Ga0070688_100023201
287 Ga0070659_100002307
288 Ga0070709_10020526
289 Ga0070709_10035963
290 Ga0070709_10062993
291 Ga0070714_100065387
292 Ga0070714_100275684
293 Ga0070714_100318314
294 Ga0070714_100415201
295 Ga0070713_100008024
296 Ga0070713_100009701
297 Ga0070713_100052885
298 Ga0070713_100088025
299 Ga0070713_100231306
300 Ga0070710_10003713
301 Ga0070710_10143799
302 Ga0070711_100010084
303 Ga0070711_100222375
304 Ga0070711_100255256
305 Ga0070708_100002491
306 Ga0070708_100020869
307 Ga0070708_100078010
308 Ga0070663_100092186
309 Ga0070678_100244301
310 Ga0070662_100038806
311 Ga0070681_10062805
312 Ga0070681_10139270
313 Ga0068867_100027761
314 Ga0070685_10010732
315 Ga0070706_100000665
316 Ga0070706_100050526
317 Ga0070707_100011905
318 Ga0070707_100020372
319 Ga0070707_100246107
320 Ga0070707_100380795
321 Ga0070698_100001063
322 Ga0070698_100028715
323 Ga0070698_100047734
324 Ga0070698_100205231
325 Ga0070699_100002090
326 Ga0070699_100011081
327 Ga0070699_100385041
328 Ga0070697_100003665
329 Ga0070697_100242012
330 Ga0068853_100069948
331 Ga0070672_100169222
332 Ga0070686_100025801
333 Ga0068855_100042988
334 Ga0070664_100162537
335 Ga0068857_100106070
336 Ga0068856_100015643
337 Ga0068856_100122716
338 Ga0068856_100134836
339 Ga0068852_100177955
340 Ga0068859_100199916
341 Ga0068864_100037350
342 Ga0068866_10018727
343 Ga0068851_10020785
344 Ga0068863_100003491
345 Ga0068860_100062368
346 Ga0068860_100500914
347 Ga0081539_10000014
348 Ga0070717_10001528
349 Ga0070717_10008205
350 Ga0070717_10301751
351 Ga0070715_10035323
352 Ga0070716_100009053
353 Ga0070716_100028449
354 Ga0070712_100039085
355 Ga0070712_100116373
356 Ga0068865_100309848
357 Ga0097620_100199903
358 Ga0105240_10103517
359 Ga0111539_10503016
360 Ga0105245_10021174
361 Ga0105247_10001312
362 Ga0105241_10015574
363 Ga0105242_10056767
364 Ga0105237_10063832
365 Ga0105237_10111643
366 Ga0105238_10815523
367 Ga0105249_10045882
368 Ga0105249_10190775
369 Ga0099796_10001106
370 Ga0099796_10063002
371 Ga0105239_10290255
372 Ga0105246_10078702
373 Ga0157373_10014216
374 Ga0157371_10274046
375 Ga0157369_10056947
376 Ga0157374_10006787
377 Ga0157378_10070301
378 Ga0163162_10029115
379 Ga0163162_10082435
380 Ga0157372_10112477
381 Ga0163163_10018078
382 Ga0163163_10020456
383 Ga0157380_10229139
384 Ga0157377_10008616
385 Ga0157379_10059899
386 Ga0157376_10013389
387 Ga0163161_10004446
388 Ga0206350_11609568
389 Ga0213876_10010317
390 Ga0224569_100549
391 Ga0224571_101467
392 Ga0224572_1008135
393 Ga0224572_1014054
394 Ga0207697_10007037
395 Ga0207656_10036360
396 Ga0207692_10004192
397 Ga0207710_10004810
398 Ga0207647_10002068
399 Ga0207699_10001312
400 Ga0207699_10023444
401 Ga0207645_10002335
402 Ga0207643_10000106
403 Ga0207684_10000229
404 Ga0207684_10021496
405 Ga0207684_10147684
406 Ga0207693_10042078
407 Ga0207693_10068786
408 Ga0207693_10134370
409 Ga0207663_10010234
410 Ga0207663_10178503
411 Ga0207663_10254501
412 Ga0207662_10030642
413 Ga0207657_10012179
414 Ga0207649_10001733
415 Ga0207646_10001298
416 Ga0207646_10001325
417 Ga0207646_10031459
418 Ga0207646_10210068
419 Ga0207650_10000042
420 Ga0207659_10030273
421 Ga0207700_10038305
422 Ga0207700_10331709
423 Ga0207664_10000029
424 Ga0207664_10228962
425 Ga0207644_10031566
426 Ga0207706_10001104
427 Ga0207670_10114100
428 Ga0207665_10013562
429 Ga0207665_10016248
430 Ga0207665_10040185
431 Ga0207665_10118374
432 Ga0207691_10011182
433 Ga0207689_10001477
434 Ga0207689_10076372
435 Ga0207661_10000160
436 Ga0207661_10074851
437 Ga0207679_10000050
438 Ga0207651_10008486
439 Ga0207640_10420644
440 Ga0207677_10047310
441 Ga0207639_10024217
442 Ga0207678_10000023
443 Ga0207702_10004380
444 Ga0207702_10243366
445 Ga0207641_10000059
446 Ga0207641_10089678
447 Ga0207648_10000041
448 Ga0207676_10000671
449 Ga0207674_10000047
450 Ga0207675_100031379
451 Ga0207683_10000017
452 Ga0268266_10002364
453 Ga0268265_10014630
454 Ga0268264_10007814
455 Ga0268264_10263153
456 Ga0265337_1006075
457 Ga0265326_10012393
458 Ga0265319_1000154
459 Ga0265334_10028626
460 Ga0265318_10010204
461 Ga0265336_10028360
462 Ga0265338_10003851
463 Ga0265338_10013713
464 Ga0265338_10030295
465 Ga0265338_10038299
466 Ga0265762_1000630
467 Ga0265762_1002993
468 Ga0265760_10002857
469 Ga0265760_10016156
470 Ga0265760_10022374
471 Ga0265325_10029213
472 Ga0265340_10056026
473 Ga0265339_10014302
474 Ga0265314_10092567
475 Ga0265342_10099437
476 Ga0265342_10111017
477 Ga0373926_0030369
478 Ga0373934_0035242
479 Ga0373923_0112814
480 Ga0373936_0004469
481 Ga0373957_0020777
482 Ga0373943_0000089
483 Ga0373935_0006016
484 Ga0373927_0007810
485 Ga0373933_0004780
486 Ga0373947_0001810
487 Ga0373937_0237597
488 Ga0373925_0001585
489 Ga0373925_0097750
490 Ga0373925_0418104
491 Ga0436365_0417223
492 Ga0466966_0099496
493 Ga0466963_0118338
494 Ga0495603_0067384
495 Ga0495653_0106673
496 Ga0495580_0001322
497 Ga0495580_0004068
498 Ga0495580_0083951
499 Ga0495582_0000161
500 Ga0495664_0086752
501 Ga0495630_0050054
502 Ga0495666_0014513
503 Ga0495665_0107203
504 Ga0495586_0188655
505 Ga0495622_0071090
506 Ga0495634_0015007
507 Ga0495635_0079524
508 Ga0495635_0199407
509 Ga0495658_0044874
510 Ga0495669_0079625
511 Ga0495613_0204593
512 Ga0495624_0087311
513 Ga0495670_0268633
514 Ga0495674_0006047
515 Ga0495674_0047066
516 Ga0495674_0090075
517 Ga0495684_0033136
518 Ga0495614_0021572
519 Ga0496100_0093338
520 Ga0496101_0111433
521 Ga0496102_0046096
522 Ga0496103_0163339
523 Ga0496104_0240451
524 Ga0496104_0715729
525 Ga0496108_0000248
526 Ga0496109_0000059
527 Ga0496111_0048095
528 Ga0496112_0000027
529 Ga0496112_0058569
530 Ga0496114_0096571
531 Ga0496115_0016437
532 Ga0496115_0190244
533 Ga0496115_0227988
534 nmdc:mga0rr50_12881_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

50

284

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4z67-assembly1.cif.gz_A the 1.5-angstrom crystal structure of mn(2+)-bound pqqb from pseudomonas putida 0.9108 2 316
1xto-assembly1.cif.gz_A-2 crystal structure of the coenzyme pqq synthesis protein (pqqb) from pseudomonas putida, northeast structural genomics target ppr6 0.9041 1 317
3jxp-assembly1.cif.gz_A crystal structure of the coenzyme pqq synthesis protein (pqqb) from pseudomonas putida 0.9016 2 316
6e13-assembly1.cif.gz_A-2 pseudomonas putida pqqb with a non-physiological zinc at the active site binds the substrate mimic, 5-cysteinyl-3,4-dihydroxyphenylalanine (5-cys-dopa), non-specifically but supports the proposed function of the enzyme in pyrroloquinoline quinone biosynthesis. 0.9013 2 316
1xto-assembly1.cif.gz_A-2 crystal structure of the coenzyme pqq synthesis protein (pqqb) from pseudomonas putida, northeast structural genomics target ppr6 0.8985 1 317
ID Description Score Start End Superfamily
6e13A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9013 2 316 3.60.15.10
4z7rA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8932 1 317 3.60.15.10
4z7rA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8904 1 317 3.60.15.10
6e13A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.879 2 316 3.60.15.10
3py6A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7505 2 317 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A2V7WXM2-F1-model_v4 Coenzyme PQQ synthesis protein B 0.9403 54 317 GO:0018189
AF-A0A2V7WXM2-F1-model_v4 Coenzyme PQQ synthesis protein B 0.9331 54 317 GO:0018189
AF-A0A2V9Q6R5-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9317 85 317
AF-A0A2V9QGH4-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9315 102 317
AF-A0A1Q7TZ65-F1-model_v4 Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) 0.9293 35 317 GO:0018189

Map