F374489

General Info

Members Datasets Scaffolds Average Seq Length
267 154 220 302

Family's Representative Sequence

Representative Sequence 3300003761|Ga0055535_1002681|Ga0055535_10026812
Length 355
Sequence VCARTSNELAHTLHSRRKNMQYLKEKAQLLQVQVVSFVRQNKVDYICNQKKMQRESNITHIKSISQLARVLGLPAPLHPLIALVDYNNVSIEMFPRGQKTSLDFYKISFKPTFTGQIKYGQAYYDFEEGGLAFLKPKQIVYPPENIESYEGLALYFHSDFIRNYPLGNTMNQYGFFSYDVSEALFLSAREKEVIASLFASIANELDNNIDNFSQDVLVSQIELLLNYSNRFYNRQFITRKAINHDIITALDKLLNNYFEEESSLKNGLPSVKYISTELKLSQRYLSDMLSSLTGLNTQQYIQNAIIEKAKEKLSTTNLSVSEIAYELGFEHSQSFSKFFKTKTNVSPLAFRQSFN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
3 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
4 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
5 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
6 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
7 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
8 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
9 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
10 2738541278 Niastella sp. CF465 Isolate Unclassified
11 2739367651 Pedobacter sp. OK291 Isolate Unclassified
12 2739367663 Pedobacter sp. YR510 Isolate Unclassified
13 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
14 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
15 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
16 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
17 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
18 2818991444 Filimonas endophytica 3197 Isolate Unclassified
19 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
20 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
21 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
22 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
23 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
24 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
25 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
26 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
27 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
28 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
29 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
30 2914759650 Rhizosphaericola mali Isolate Rhizosphere
31 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
32 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
33 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
34 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
35 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
36 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
37 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
38 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
39 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
40 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
41 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
42 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
43 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
44 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
45 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
48 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
49 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
50 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
51 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
52 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
53 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
54 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
55 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
56 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
57 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
58 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
59 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
93 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
110 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
126 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
127 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
128 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
129 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
130 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
131 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
132 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
133 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
134 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
139 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
140 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
141 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
142 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
143 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
146 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
147 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
150 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
151 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
152 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.02
Metatranscriptomes 0
Isolates 17.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.84
Nodule 0.75
Rhizoplane 0.37
Rhizosphere 47.19
Stem 0
Stem Tuber 0
Unclassified 25.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1478118 2162886007 Bacteria 1901
2 SwRhRL2b_contig_2871430 2162886007 Bacteria 4666
3 rootH1_10072304 3300003316 Bacteria 11888
4 rootH1_10072304 3300003323 Bacteria 1468
5 rootH1_10197536 3300003316 Unclassified 1243
6 rootH2_10149216 3300003320 Bacteria 9514
7 rootH2_10233910 3300003320 Bacteria 2251
8 rootH2_10278523 3300003320 Bacteria 3687
9 rootL2_10006411 3300003322 Bacteria 14224
10 rootL2_10011276 3300003322 Bacteria 15995
11 rootL2_10023864 3300003322 Bacteria 36647
12 rootL2_10025491 3300003322 Bacteria 15058
13 rootL2_10029221 3300003322 Bacteria 12469
14 rootL2_10048001 3300003322 Bacteria 1782
15 rootL2_10055409 3300003322 Bacteria 4563
16 rootL2_10079733 3300003322 Bacteria 1660
17 rootL2_10132669 3300003322 Unclassified 3276
18 rootH1_10001790 3300003323 Bacteria 63047
19 rootH1_10003800 3300003323 Bacteria 30657
20 rootH1_10005689 3300003323 Bacteria 9971
21 rootH1_10010089 3300003316 Bacteria 2872
22 rootH1_10010089 3300003323 Bacteria 8053
23 rootH1_10098340 3300003323 Bacteria 4413
24 Ga0055535_1000572 3300003761 Bacteria 31004
25 Ga0055535_1002681 3300003761 Bacteria 5807
26 Ga0055542_1002430 3300003762 Bacteria 6170
27 Ga0055542_1002694 3300003762 Bacteria 5457
28 Ga0055531_10000071 3300003794 Bacteria 110534
29 Ga0055531_10000076 3300003794 Bacteria 106998
30 Ga0055531_10000256 3300003794 Bacteria 56574
31 Ga0065165_1001272 3300005262 Bacteria 28523
32 Ga0065165_1001312 3300005262 Bacteria 27760
33 Ga0065714_10004681 3300005288 Bacteria 6052
34 Ga0065714_10064709 3300005288 Bacteria 22067
35 Ga0065714_10091417 3300005288 Bacteria 1911
36 Ga0065704_10000289 3300005289 Bacteria 49641
37 Ga0065704_10071388 3300005289 Bacteria 11360
38 Ga0065704_10077350 3300005289 Bacteria 4766
39 Ga0065704_10080740 3300005289 Bacteria 3888
40 Ga0070660_100254271 3300005339 Bacteria 1433
41 Ga0070661_100383460 3300005344 Bacteria 1108
42 Ga0070659_100052534 3300005366 Bacteria 3206
43 Ga0070684_100010836 3300005535 Bacteria 7241
44 Ga0068853_100705789 3300005539 Bacteria 962
45 Ga0068855_100037129 3300005563 Bacteria 5796
46 Ga0068856_100053823 3300005614 Bacteria 3969
47 Ga0079104_1000005 3300006946 Bacteria 407099
48 Ga0075435_100332467 3300007076 Bacteria 1301
49 Ga0105244_10000057 3300009036 Bacteria 129775
50 Ga0105244_10017312 3300009036 Bacteria 4075
51 Ga0105244_10077100 3300009036 Bacteria 1654
52 Ga0105243_10000004 3300009148 Bacteria 601266
53 Ga0105241_10029349 3300009174 Bacteria 4104
54 Ga0105237_10080119 3300009545 Bacteria 3256
55 Ga0157373_10001570 3300013100 Bacteria 17432
56 Ga0157373_10009344 3300013100 Bacteria 7245
57 Ga0157373_10039067 3300013100 Bacteria 3398
58 Ga0157371_10000021 3300013102 Bacteria 301017
59 Ga0157371_10000050 3300013102 Bacteria 183160
60 Ga0157371_10026603 3300013102 Bacteria 4203
61 Ga0157371_10050905 3300013102 Bacteria 2943
62 Ga0157370_10000788 3300013104 Bacteria 39828
63 Ga0157370_10002075 3300013104 Bacteria 24529
64 Ga0157370_10004078 3300013104 Bacteria 16933
65 Ga0157370_10006912 3300013104 Bacteria 12407
66 Ga0157370_10012796 3300013104 Bacteria 8675
67 Ga0157370_10045441 3300013104 Bacteria 4213
68 Ga0157370_10638364 3300013104 Bacteria 974
69 Ga0157369_10000004 3300013105 Bacteria 479764
70 Ga0157369_10009222 3300013105 Bacteria 11288
71 Ga0157369_10053401 3300013105 Bacteria 4369
72 Ga0157374_10050831 3300013296 Bacteria 3854
73 Ga0182006_1000345 3300015261 Bacteria 39520
74 Ga0182006_1000771 3300015261 Bacteria 21642
75 Ga0182006_1015978 3300015261 Bacteria 3208
76 Ga0182007_10000006 3300015262 Bacteria 427355
77 Ga0182005_1000357 3300015265 Bacteria 25732
78 Ga0182005_1000830 3300015265 Bacteria 13853
79 Ga0163161_10000232 3300017792 Bacteria 51372
80 Ga0163161_10061932 3300017792 Unclassified 2725
81 Ga0163161_10078444 3300017792 Bacteria 2427
82 Ga0209436_104206 3300025208 Bacteria 3606
83 Ga0209258_100193 3300025242 Bacteria 124682
84 Ga0209258_100311 3300025242 Bacteria 76151
85 Ga0209258_100378 3300025242 Bacteria 57308
86 Ga0209148_1000163 3300025254 Bacteria 137449
87 Ga0209148_1000167 3300025254 Bacteria 135407
88 Ga0209148_1000481 3300025254 Bacteria 41878
89 Ga0209050_1002267 3300025298 Bacteria 17052
90 Ga0207426_1008943 3300025302 Bacteria 3995
91 Ga0209257_1000001 3300025304 Bacteria 2274655
92 Ga0209257_1000013 3300025304 Bacteria 1047305
93 Ga0209257_1000064 3300025304 Bacteria 356803
94 Ga0209257_1030946 3300025304 Bacteria 1719
95 Ga0207655_1000038 3300025728 Bacteria 348340
96 Ga0207671_10097350 3300025914 Bacteria 2224
97 Ga0207649_10334230 3300025920 Bacteria 1117
98 Ga0207709_10000010 3300025935 Bacteria 601305
99 Ga0207661_10001498 3300025944 Bacteria 15820
100 Ga0207667_10017702 3300025949 Bacteria 8016
101 Ga0207639_10203679 3300026041 Bacteria 1699
102 Ga0207702_10102310 3300026078 Bacteria 2531
103 Ga0207702_10173723 3300026078 Bacteria 1978
104 Ga0207674_10103187 3300026116 Bacteria 2831
105 Ga0209281_1000216 3300027111 Bacteria 125724
106 Ga0307515_10000003 3300028794 Bacteria 891317
107 Ga0307515_10000016 3300028794 Bacteria 554870
108 Ga0316176_1214326 3300030732 Bacteria 7624
109 Ga0316181_1193544 3300030744 Bacteria 5722
110 Ga0307513_10061858 3300031456 Bacteria 3960
111 Ga0307513_10079953 3300031456 Bacteria 3374
112 Ga0307513_10150794 3300031456 Bacteria 2234
113 Ga0307405_10000005 3300031731 Bacteria 376536
114 Ga0307405_10000020 3300031731 Bacteria 156779
115 Ga0307413_10000064 3300031824 Bacteria 26787
116 Ga0307406_10002241 3300031901 Bacteria 10530
117 Ga0307407_10000036 3300031903 Bacteria 76457
118 Ga0307412_10000023 3300031911 Bacteria 237005
119 Ga0307412_10000028 3300031911 Bacteria 213966
120 Ga0307416_100000007 3300032002 Bacteria 433284
121 Ga0307416_100000052 3300032002 Bacteria 114516
122 Ga0307414_10000322 3300032004 Bacteria 27336
123 Ga0307414_10003047 3300032004 Bacteria 8889
124 Ga0307414_10066826 3300032004 Bacteria 2572
125 Ga0307411_10000001 3300032005 Bacteria 931810
126 Ga0451849_0798407 3300041505 Bacteria 1299
127 Ga0451853_3792452 3300041512 Bacteria 1020
128 Ga0439445_0000070 3300042004 Bacteria 15513
129 Ga0466957_0014326 3300044842 Bacteria 4616
130 Ga0495627_004759 3300046453 Bacteria 5612
131 Ga0495627_008224 3300046453 Bacteria 3925
132 Ga0495627_036980 3300046453 Bacteria 1515
133 Ga0495638_0134985 3300046460 Bacteria 1446
134 Ga0495606_0010399 3300046507 Bacteria 7727
135 Ga0495606_0027309 3300046507 Bacteria 4051
136 Ga0495616_0013697 3300046513 Bacteria 4567
137 Ga0495632_0004127 3300046519 Bacteria 9987
138 Ga0495648_0042208 3300046524 Bacteria 2872
139 Ga0495663_0009822 3300046525 Bacteria 2657
140 Ga0495625_0002868 3300046660 Bacteria 18060
141 Ga0495625_0006572 3300046660 Bacteria 10318
142 Ga0495625_0046357 3300046660 Bacteria 3137
143 Ga0495625_0120137 3300046660 Bacteria 1789
144 Ga0495625_0145975 3300046660 Bacteria 1593
145 Ga0495660_0020578 3300046810 Bacteria 3782
146 Ga0495681_0032851 3300047470 Bacteria 2607
147 Ga0495686_0000125 3300047472 Bacteria 158834
148 Ga0495686_0000481 3300047472 Bacteria 59335
149 Ga0495686_0000537 3300047472 Bacteria 54196
150 Ga0495686_0250762 3300047472 Bacteria 995
151 Ga0496101_0021376 3300048904 Bacteria 4447
152 Ga0496116_0000024 3300048919 Bacteria 471420
153 Ga0496117_0251445 3300048920 Bacteria 964
154 Ga0496121_0000007 3300048924 Bacteria 942516
155 Ga0496121_0000011 3300048924 Bacteria 792193
156 Ga0496121_0012097 3300048924 Bacteria 9483
157 Ga0496121_0129577 3300048924 Bacteria 1891
158 Ga0496124_0010428 3300048927 Bacteria 9406
159 Ga0496124_0061140 3300048927 Bacteria 3158
160 Ga0496125_0000018 3300048928 Bacteria 482390
161 Ga0496126_0004187 3300048929 Bacteria 17384
162 Ga0496126_0016382 3300048929 Bacteria 7414
163 Ga0496126_0018246 3300048929 Bacteria 6960
164 Ga0496126_0034983 3300048929 Bacteria 4711
165 Ga0496126_0098205 3300048929 Bacteria 2566
166 Ga0496126_0105436 3300048929 Bacteria 2461
167 Ga0501249_000070 3300049679 Bacteria 35806
168 Ga0501249_003099 3300049679 Bacteria 3346
169 Ga0501251_001713 3300049681 Bacteria 2068
170 Ga0501225_0002082 3300049705 Bacteria 6221
171 Ga0501241_000278 3300049758 Bacteria 11304
172 Ga0501241_000514 3300049758 Bacteria 8351
173 Ga0501266_000019 3300049763 Bacteria 114355
174 Ga0501269_000098 3300049766 Bacteria 27230
175 Ga0500578_0001543 3300053086 Bacteria 22580
176 Ga0500578_0032966 3300053086 Bacteria 3330
177 Ga0500644_0000081 3300053088 Bacteria 58662
178 Ga0500646_0010005 3300053090 Unclassified 2430
179 Ga0500646_0015945 3300053090 Bacteria 1959
180 Ga0500646_0036303 3300053090 Bacteria 1372
181 Ga0500583_0000113 3300053092 Bacteria 39569
182 Ga0500583_0003623 3300053092 Bacteria 4897
183 Ga0500583_0010035 3300053092 Bacteria 3493
184 Ga0500651_0000084 3300053093 Bacteria 60127
185 Ga0500651_0071314 3300053093 Bacteria 2162
186 Ga0500641_0045430 3300053096 Bacteria 1789
187 Ga0500562_003639 3300053108 Bacteria 3871
188 Ga0500569_000102 3300053109 Bacteria 13321
189 Ga0500607_031532 3300053121 Bacteria 2914
190 Ga0500652_068548 3300053131 Bacteria 1467
191 Ga0500658_0000002 3300053134 Bacteria 548440
192 Ga0500658_0000003 3300053134 Bacteria 512506
193 Ga0500658_0000826 3300053134 Bacteria 12746
194 Ga0500658_0009973 3300053134 Bacteria 3504
195 Ga0500658_0056122 3300053134 Bacteria 1624
196 Ga0500559_0003234 3300053136 Bacteria 8093
197 Ga0500559_0020064 3300053136 Bacteria 2825
198 Ga0500561_0027879 3300053137 Bacteria 1397
199 Ga0500568_0008752 3300053139 Bacteria 4853
200 Ga0500568_0019071 3300053139 Bacteria 2990
201 Ga0500577_0029197 3300053142 Bacteria 1907
202 Ga0500589_022130 3300053147 Bacteria 2923
203 Ga0500604_0028160 3300053151 Bacteria 1630
204 Ga0500616_0020567 3300053153 Bacteria 3706
205 Ga0500616_0028768 3300053153 Bacteria 3060
206 Ga0500616_0120692 3300053153 Bacteria 1253
207 Ga0500622_0000004 3300053156 Bacteria 557587
208 Ga0500622_0000005 3300053156 Bacteria 502443
209 Ga0500622_0000008 3300053156 Bacteria 423636
210 Ga0500622_0000051 3300053156 Bacteria 145514
211 Ga0500622_0000619 3300053156 Bacteria 32146
212 Ga0500622_0003033 3300053156 Bacteria 11597
213 Ga0500622_0009355 3300053156 Bacteria 5424
214 Ga0500622_0023980 3300053156 Bacteria 3229
215 Ga0500622_0082758 3300053156 Bacteria 1604
216 Ga0500633_0063103 3300053160 Bacteria 1307
217 Ga0500636_0103487 3300053177 Bacteria 1616
218 Ga0500584_005708 3300053726 Bacteria 5264
219 Ga0500645_044480 3300053730 Bacteria 1306
220 Ga0500661_005166 3300055283 Bacteria 2444

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041512 Ga0451853_3792452 Ga0451853_3792452_12_824 270
2 3300048920 Ga0496117_0251445 Ga0496117_0251445_21_845 272
3 3300048924 Ga0496121_0012097 Ga0496121_0012097_1680_2594 279
4 3300048924 Ga0496121_0000007 Ga0496121_0000007_455571_456413 280
5 3300053730 Ga0500645_044480 Ga0500645_044480_171_1082 283
6 3300017792 Ga0163161_10078444 Ga0163161_100784442 285
7 3300025302 Ga0207426_1008943 Ga0207426_10089432 285
8 3300046660 Ga0495625_0145975 Ga0495625_0145975_686_1543 285
9 3300048904 Ga0496101_0021376 Ga0496101_0021376_2619_3476 285
10 3300048929 Ga0496126_0018246 Ga0496126_0018246_3288_4145 285
11 3300049679 Ga0501249_000070 Ga0501249_000070_24253_25116 285
12 3300053134 Ga0500658_0000826 Ga0500658_0000826_3356_4213 285
13 3300031731 Ga0307405_10000020 Ga0307405_10000020148 286
14 3300015261 Ga0182006_1000345 Ga0182006_10003457 287
15 3300046660 Ga0495625_0120137 Ga0495625_0120137_628_1491 287
16 3300053096 Ga0500641_0045430 Ga0500641_0045430_889_1752 287
17 3300003323 rootH1_10098340 rootH1_100983403 288
18 3300028794 Ga0307515_10000003 Ga0307515_1000000310 288
19 3300044842 Ga0466957_0014326 Ga0466957_0014326_2260_3126 288
20 3300046513 Ga0495616_0013697 Ga0495616_0013697_1178_2044 288
21 3300046660 Ga0495625_0002868 Ga0495625_0002868_5904_6770 288
22 3300053092 Ga0500583_0003623 Ga0500583_0003623_3474_4340 288
23 3300053139 Ga0500568_0008752 Ga0500568_0008752_1170_2036 288
24 3300046660 Ga0495625_0046357 Ga0495625_0046357_2023_2892 289
25 3300047472 Ga0495686_0000481 Ga0495686_0000481_37740_38609 289
26 3300047472 Ga0495686_0250762 Ga0495686_0250762_97_966 289
27 3300049681 Ga0501251_001713 Ga0501251_001713_20_937 289
28 3300049766 Ga0501269_000098 Ga0501269_000098_8409_9326 289
29 iso_pu_bacteria 2818991442 2819576589 290
30 3300046507 Ga0495606_0027309 Ga0495606_0027309_1460_2374 291
31 iso_pu_bacteria 2896109856 2896113452 291
32 iso_pu_bacteria 2821136567 2821143201 293
33 iso_pu_bacteria 2904467357 2904470096 293
34 3300015265 Ga0182005_1000830 Ga0182005_100083012 294
35 3300003316 rootH1_10072304 rootH1_100723045 296
36 3300003320 rootH2_10233910 rootH2_102339102 296
37 3300003322 rootL2_10079733 rootL2_100797331 296
38 3300048924 Ga0496121_0000011 Ga0496121_0000011_652508_653398 296
39 iso_pu_bacteria 2818991442 2819575511 296
40 iso_pu_bacteria 2821136567 2821138067 296
41 iso_pu_bacteria 2904467357 2904468862 296
42 3300009036 Ga0105244_10077100 Ga0105244_100771002 297
43 3300025208 Ga0209436_104206 Ga0209436_1042062 297
44 3300048927 Ga0496124_0061140 Ga0496124_0061140_468_1361 297
45 iso_pu_bacteria 2738541278 2738731280 297
46 iso_pu_bacteria 2842903701 2842908948 297
47 iso_pu_bacteria 2929921140 2929924087 297
48 iso_pu_bacteria 2585428061 2587751408 298
49 iso_pu_bacteria 2643221600 2644009094 298
50 iso_pu_bacteria 2643221716 2644644009 298
51 iso_pu_bacteria 2739367663 2739646020 298
52 iso_pu_bacteria 2739367857 2740002737 298
53 iso_pu_bacteria 2739367858 2740007554 298
54 iso_pu_bacteria 2818991444 2819589477 298
55 iso_pu_bacteria 2833640130 2833643262 298
56 iso_pu_bacteria 2857618242 2857619611 298
57 iso_pu_bacteria 2881247448 2881249642 298
58 iso_pu_bacteria 2904555929 2904557125 298
59 iso_pu_bacteria 2919191525 2919194111 298
60 iso_pu_bacteria 2954016120 2954020313 298
61 iso_pu_bacteria 2739367651 2739589396 299
62 iso_pu_bacteria 2914759650 2914761030 299
63 iso_pu_bacteria 2914759650 2914761704 299
64 iso_pu_bacteria 2929154850 2929157107 299
65 3300015265 Ga0182005_1000357 Ga0182005_100035727 300
66 iso_pu_bacteria 2585428061 2587750525 300
67 iso_pu_bacteria 2585428115 2587943463 300
68 iso_pu_bacteria 2585428187 2588234087 300
69 iso_pu_bacteria 2643221725 2644682890 300
70 iso_pu_bacteria 2802428842 2802654494 300
71 iso_pu_bacteria 2842722452 2842725910 300
72 iso_pu_bacteria 2842903701 2842906475 300
73 iso_pu_bacteria 2842909656 2842912912 300
74 iso_pu_bacteria 2857627736 2857628167 300
75 iso_pu_bacteria 2945924605 2945928298 300
76 iso_pu_bacteria 2945997725 2945998159 300
77 iso_pu_bacteria 2946019816 2946021098 300
78 iso_pu_bacteria 2977268062 2977270596 300
79 iso_pu_bacteria 2993480792 2993483680 300
80 3300003316 rootH1_10197536 rootH1_101975361 301
81 3300003320 rootH2_10278523 rootH2_102785231 301
82 3300003322 rootL2_10011276 rootL2_100112767 301
83 3300003322 rootL2_10023864 rootL2_100238649 301
84 3300003322 rootL2_10029221 rootL2_100292215 301
85 3300003322 rootL2_10055409 rootL2_100554095 301
86 3300003323 rootH1_10001790 rootH1_100017903 301
87 3300003323 rootH1_10005689 rootH1_100056897 301
88 3300003762 Ga0055542_1002694 Ga0055542_10026942 301
89 3300003794 Ga0055531_10000256 Ga0055531_1000025634 301
90 3300005539 Ga0068853_100705789 Ga0068853_1007057891 301
91 3300005563 Ga0068855_100037129 Ga0068855_1000371293 301
92 3300005614 Ga0068856_100053823 Ga0068856_1000538232 301
93 3300007076 Ga0075435_100332467 Ga0075435_1003324672 301
94 3300009174 Ga0105241_10029349 Ga0105241_100293493 301
95 3300009545 Ga0105237_10080119 Ga0105237_100801192 301
96 3300025242 Ga0209258_100311 Ga0209258_1003118 301
97 3300025254 Ga0209148_1000163 Ga0209148_100016373 301
98 3300025304 Ga0209257_1000013 Ga0209257_1000013285 301
99 3300025914 Ga0207671_10097350 Ga0207671_100973502 301
100 3300025949 Ga0207667_10017702 Ga0207667_100177026 301
101 3300026041 Ga0207639_10203679 Ga0207639_102036792 301
102 3300026078 Ga0207702_10173723 Ga0207702_101737232 301
103 3300026116 Ga0207674_10103187 Ga0207674_101031873 301
104 3300041505 Ga0451849_0798407 Ga0451849_0798407_141_1046 301
105 3300049758 Ga0501241_000278 Ga0501241_000278_5833_6738 301
106 3300053092 Ga0500583_0000113 Ga0500583_0000113_38097_39002 301
107 3300053131 Ga0500652_068548 Ga0500652_068548_222_1127 301
108 3300053134 Ga0500658_0056122 Ga0500658_0056122_93_998 301
109 3300053139 Ga0500568_0019071 Ga0500568_0019071_1440_2357 301
110 3300053153 Ga0500616_0120692 Ga0500616_0120692_28_933 301
111 3300053156 Ga0500622_0000051 Ga0500622_0000051_81293_82198 301
112 3300053177 Ga0500636_0103487 Ga0500636_0103487_38_943 301
113 iso_pu_bacteria 2585428095 2587866844 301
114 iso_pu_bacteria 2728369107 2729199070 301
115 iso_pu_bacteria 2775506739 2775673586 301
116 iso_pu_bacteria 2857618242 2857618724 301
117 iso_pu_bacteria 2919097161 2919097692 301
118 iso_pu_bacteria 2958512119 2958513013 301
119 3300003320 rootH2_10149216 rootH2_101492168 302
120 3300003322 rootL2_10025491 rootL2_100254918 302
121 3300003323 rootH1_10003800 rootH1_1000380014 302
122 3300006946 Ga0079104_1000005 Ga0079104_1000005251 302
123 3300009036 Ga0105244_10000057 Ga0105244_1000005717 302
124 3300009036 Ga0105244_10017312 Ga0105244_100173122 302
125 3300013102 Ga0157371_10000021 Ga0157371_10000021144 302
126 3300013102 Ga0157371_10026603 Ga0157371_100266037 302
127 3300013104 Ga0157370_10002075 Ga0157370_1000207515 302
128 3300013104 Ga0157370_10012796 Ga0157370_100127965 302
129 3300013105 Ga0157369_10009222 Ga0157369_1000922210 302
130 3300025298 Ga0209050_1002267 Ga0209050_10022675 302
131 3300025728 Ga0207655_1000038 Ga0207655_1000038319 302
132 3300027111 Ga0209281_1000216 Ga0209281_100021638 302
133 3300030732 Ga0316176_1214326 Ga0316176_12143262 302
134 3300030744 Ga0316181_1193544 Ga0316181_11935442 302
135 3300032004 Ga0307414_10003047 Ga0307414_100030475 302
136 3300032004 Ga0307414_10066826 Ga0307414_100668263 302
137 3300046453 Ga0495627_008224 Ga0495627_008224_2828_3742 302
138 3300047472 Ga0495686_0000125 Ga0495686_0000125_69458_70369 302
139 3300048919 Ga0496116_0000024 Ga0496116_0000024_3564_4478 302
140 3300048927 Ga0496124_0010428 Ga0496124_0010428_6762_7676 302
141 3300048928 Ga0496125_0000018 Ga0496125_0000018_477912_478826 302
142 3300048929 Ga0496126_0098205 Ga0496126_0098205_937_1851 302
143 3300048929 Ga0496126_0105436 Ga0496126_0105436_179_1093 302
144 3300049705 Ga0501225_0002082 Ga0501225_0002082_5159_6070 302
145 3300053134 Ga0500658_0000002 Ga0500658_0000002_79186_80100 302
146 3300053136 Ga0500559_0020064 Ga0500559_0020064_1384_2298 302
147 3300053151 Ga0500604_0028160 Ga0500604_0028160_93_1010 302
148 3300053156 Ga0500622_0000004 Ga0500622_0000004_228954_229871 302
149 3300053156 Ga0500622_0000005 Ga0500622_0000005_168350_169267 302
150 3300053156 Ga0500622_0000008 Ga0500622_0000008_275781_276695 302
151 3300053726 Ga0500584_005708 Ga0500584_005708_2669_3583 302
152 3300005288 Ga0065714_10004681 Ga0065714_100046812 303
153 3300005339 Ga0070660_100254271 Ga0070660_1002542712 303
154 3300005366 Ga0070659_100052534 Ga0070659_1000525341 303
155 3300013102 Ga0157371_10050905 Ga0157371_100509052 303
156 3300026078 Ga0207702_10102310 Ga0207702_101023103 303
157 3300031456 Ga0307513_10061858 Ga0307513_100618583 303
158 3300053090 Ga0500646_0010005 Ga0500646_0010005_1233_2144 303
159 3300053092 Ga0500583_0010035 Ga0500583_0010035_1886_2797 303
160 2162886007 SwRhRL2b_contig_2871430 SwRhRL2b_0276.00007140 304
161 3300003322 rootL2_10006411 rootL2_100064115 304
162 3300003322 rootL2_10132669 rootL2_101326693 304
163 3300003761 Ga0055535_1000572 Ga0055535_10005723 304
164 3300003761 Ga0055535_1002681 Ga0055535_10026812 304
165 3300003762 Ga0055542_1002430 Ga0055542_10024307 304
166 3300003794 Ga0055531_10000071 Ga0055531_1000007186 304
167 3300003794 Ga0055531_10000076 Ga0055531_100000766 304
168 3300005262 Ga0065165_1001272 Ga0065165_100127211 304
169 3300005288 Ga0065714_10064709 Ga0065714_1006470912 304
170 3300005288 Ga0065714_10091417 Ga0065714_100914171 304
171 3300005289 Ga0065704_10000289 Ga0065704_1000028931 304
172 3300005289 Ga0065704_10077350 Ga0065704_100773504 304
173 3300005289 Ga0065704_10080740 Ga0065704_100807402 304
174 3300005344 Ga0070661_100383460 Ga0070661_1003834601 304
175 3300005535 Ga0070684_100010836 Ga0070684_1000108367 304
176 3300013100 Ga0157373_10001570 Ga0157373_100015707 304
177 3300013100 Ga0157373_10009344 Ga0157373_100093443 304
178 3300013100 Ga0157373_10039067 Ga0157373_100390674 304
179 3300013102 Ga0157371_10000050 Ga0157371_1000005092 304
180 3300013104 Ga0157370_10000788 Ga0157370_100007886 304
181 3300013104 Ga0157370_10004078 Ga0157370_100040783 304
182 3300013104 Ga0157370_10045441 Ga0157370_100454411 304
183 3300013104 Ga0157370_10638364 Ga0157370_106383641 304
184 3300013105 Ga0157369_10000004 Ga0157369_10000004317 304
185 3300013105 Ga0157369_10053401 Ga0157369_100534012 304
186 3300013296 Ga0157374_10050831 Ga0157374_100508313 304
187 3300015261 Ga0182006_1000771 Ga0182006_100077111 304
188 3300015262 Ga0182007_10000006 Ga0182007_10000006108 304
189 3300017792 Ga0163161_10000232 Ga0163161_1000023238 304
190 3300017792 Ga0163161_10061932 Ga0163161_100619323 304
191 3300025242 Ga0209258_100193 Ga0209258_100193103 304
192 3300025242 Ga0209258_100378 Ga0209258_10037817 304
193 3300025254 Ga0209148_1000167 Ga0209148_100016713 304
194 3300025254 Ga0209148_1000481 Ga0209148_100048117 304
195 3300025304 Ga0209257_1000001 Ga0209257_1000001552 304
196 3300025304 Ga0209257_1000064 Ga0209257_10000646 304
197 3300025920 Ga0207649_10334230 Ga0207649_103342301 304
198 3300025944 Ga0207661_10001498 Ga0207661_100014984 304
199 3300028794 Ga0307515_10000016 Ga0307515_10000016330 304
200 3300031456 Ga0307513_10079953 Ga0307513_100799534 304
201 3300031903 Ga0307407_10000036 Ga0307407_1000003640 304
202 3300031911 Ga0307412_10000023 Ga0307412_1000002327 304
203 3300032002 Ga0307416_100000007 Ga0307416_100000007218 304
204 3300032004 Ga0307414_10000322 Ga0307414_100003226 304
205 3300042004 Ga0439445_0000070 Ga0439445_0000070_12475_13389 304
206 3300046453 Ga0495627_004759 Ga0495627_004759_2873_3787 304
207 3300046453 Ga0495627_036980 Ga0495627_036980_380_1294 304
208 3300046460 Ga0495638_0134985 Ga0495638_0134985_95_1009 304
209 3300046507 Ga0495606_0010399 Ga0495606_0010399_3695_4609 304
210 3300046519 Ga0495632_0004127 Ga0495632_0004127_8409_9323 304
211 3300046524 Ga0495648_0042208 Ga0495648_0042208_1695_2609 304
212 3300046525 Ga0495663_0009822 Ga0495663_0009822_740_1654 304
213 3300046660 Ga0495625_0006572 Ga0495625_0006572_1916_2830 304
214 3300046810 Ga0495660_0020578 Ga0495660_0020578_53_967 304
215 3300047470 Ga0495681_0032851 Ga0495681_0032851_1495_2409 304
216 3300047472 Ga0495686_0000537 Ga0495686_0000537_3240_4154 304
217 3300048929 Ga0496126_0004187 Ga0496126_0004187_6221_7138 304
218 3300048929 Ga0496126_0034983 Ga0496126_0034983_2843_3757 304
219 3300049758 Ga0501241_000514 Ga0501241_000514_1533_2447 304
220 3300053086 Ga0500578_0001543 Ga0500578_0001543_9417_10331 304
221 3300053088 Ga0500644_0000081 Ga0500644_0000081_55284_56198 304
222 3300053090 Ga0500646_0015945 Ga0500646_0015945_560_1474 304
223 3300053090 Ga0500646_0036303 Ga0500646_0036303_391_1305 304
224 3300053093 Ga0500651_0000084 Ga0500651_0000084_18570_19484 304
225 3300053093 Ga0500651_0071314 Ga0500651_0071314_186_1100 304
226 3300053108 Ga0500562_003639 Ga0500562_003639_1019_1933 304
227 3300053109 Ga0500569_000102 Ga0500569_000102_6518_7432 304
228 3300053121 Ga0500607_031532 Ga0500607_031532_1838_2752 304
229 3300053134 Ga0500658_0009973 Ga0500658_0009973_2249_3163 304
230 3300053136 Ga0500559_0003234 Ga0500559_0003234_2799_3713 304
231 3300053137 Ga0500561_0027879 Ga0500561_0027879_60_974 304
232 3300053142 Ga0500577_0029197 Ga0500577_0029197_393_1307 304
233 3300053147 Ga0500589_022130 Ga0500589_022130_205_1119 304
234 3300053153 Ga0500616_0028768 Ga0500616_0028768_1115_2029 304
235 3300053156 Ga0500622_0000619 Ga0500622_0000619_30711_31625 304
236 3300053156 Ga0500622_0003033 Ga0500622_0003033_57_971 304
237 3300053156 Ga0500622_0023980 Ga0500622_0023980_1427_2341 304
238 3300053156 Ga0500622_0082758 Ga0500622_0082758_670_1590 304
239 3300053160 Ga0500633_0063103 Ga0500633_0063103_71_985 304
240 3300055283 Ga0500661_005166 Ga0500661_005166_1486_2400 304
241 iso_pu_bacteria 2993372514 2993373710 304
242 2162886007 SwRhRL2b_contig_1478118 SwRhRL2b_0559.00008320 305
243 3300003322 rootL2_10048001 rootL2_100480011 305
244 3300003323 rootH1_10010089 rootH1_1001008910 305
245 3300005262 Ga0065165_1001312 Ga0065165_100131219 305
246 3300005289 Ga0065704_10071388 Ga0065704_100713889 305
247 3300009148 Ga0105243_10000004 Ga0105243_10000004499 305
248 3300013104 Ga0157370_10006912 Ga0157370_100069123 305
249 3300015261 Ga0182006_1015978 Ga0182006_10159784 305
250 3300025304 Ga0209257_1000013 Ga0209257_1000013241 305
251 3300025304 Ga0209257_1030946 Ga0209257_10309462 305
252 3300025935 Ga0207709_10000010 Ga0207709_10000010501 305
253 3300031456 Ga0307513_10150794 Ga0307513_101507941 305
254 3300031731 Ga0307405_10000005 Ga0307405_10000005128 305
255 3300031824 Ga0307413_10000064 Ga0307413_1000006432 305
256 3300031901 Ga0307406_10002241 Ga0307406_100022415 305
257 3300031911 Ga0307412_10000028 Ga0307412_10000028144 305
258 3300032002 Ga0307416_100000052 Ga0307416_10000005218 305
259 3300032005 Ga0307411_10000001 Ga0307411_10000001381 305
260 3300048924 Ga0496121_0129577 Ga0496121_0129577_848_1765 305
261 3300048929 Ga0496126_0016382 Ga0496126_0016382_4072_4989 305
262 3300049679 Ga0501249_003099 Ga0501249_003099_335_1252 305
263 3300049763 Ga0501266_000019 Ga0501266_000019_4359_5276 305
264 3300053086 Ga0500578_0032966 Ga0500578_0032966_865_1782 305
265 3300053134 Ga0500658_0000003 Ga0500658_0000003_234885_235802 305
266 3300053153 Ga0500616_0020567 Ga0500616_0020567_891_1808 305
267 3300053156 Ga0500622_0009355 Ga0500622_0009355_1864_2781 305

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

274

353

0.97

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

313

352

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.8726 196 303
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.8615 190 302
7vwz-assembly1.cif.gz_G cryo-em structure of rob-dependent transcription activation complex in a unique conformation 0.8604 204 302
3mkl-assembly2.cif.gz_B crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.8577 196 302
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.8516 193 303
ID Description Score Start End Superfamily
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9795 257 301 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9602 255 302 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9584 253 304 1.10.10.60
1bl0A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.948 258 301 1.10.10.60
3lsgB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9461 257 301 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A4Q3EPE4-F1-model_v4 deleted 0.99 212 305
AF-A0A4Q3EPE4-F1-model_v4 deleted 0.9696 212 305
AF-A0A4R1AGG4-F1-model_v4 deleted 0.9494 218 303
AF-A0A1W6LKE3-F1-model_v4 Xylose operon regulatory protein 0.9205 195 302 GO:0000976
GO:0003700
AF-A0A841TBB5-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9174 189 303 GO:0003700
GO:0043565

Feature Viewer

pLDDT pTM Quality
83.14 0.73 High
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Predicted Structure (AlphaFold2)

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